Cp4.1LG15g02550 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g02550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Lateral root primordium family protein
Location	Cp4.1LG15 : 2450606 .. 2451555 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGGTTTGTTCTATTTAAGTGAAAAACAAGAGGAAAATCAAGAACAAAGAGGAAGAGAACAGCAATTGTTCTTGTCCAAGGGCTTGGAGATATGGCCACAACAAAATCTAGAGAATTACATTTCATTTGGAGTGGGTCCGAGTCGGAGGAACTTCATGATCAACGCCTCCGATCGTCACGATCAGTTTGTCCCGAGATTAGGGTTTTCGATCAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGATGTAGAACTTGTTGTAAGAGCCGAGGGTTTCATTGCCAAACTCATGTCAAAAGTACTTGGGTTCCGGCTACCAAGCGCCGGGAACGGCAGCTACAACGTCACCAAATTGTTCGGCAACAATCCCGACTAGATCGACCCGATCAGACCGCTCCAGTCGACACTCCAGGTGATTAATTTTCGATGAAATTCATAAGCTTAAGTCGAAAAATTACGATGATGATGGATGATTCAAACCCTAGGGTGAGATGGGTGTAGTGTTTCATTAGAATTACAATTATTTTTGTTCTTCTAATCGATTTGATTTGGAATTAGGGTTAGAAGTTGCGAATTTTCCAGCTGAATTCAACTCCTCAGCCGTTTTTCGGTGCGTGAAAGTCAGTGCCATCGACGATGTCGAAGAACAATTCGCATATCAAACATCAGTGAACATTGGTGGGCGTATGTTCAAAGGGATTCTTTACGACCAAGGTCCCGAAAGCACTCCAAATTTGAGCACGGGCGGCGAGAGCTCGTATTGCTACGGCGGAGAAGACGATAGTCAAGCGCTCGAGCTGGTGATCGGAGCGTCGAACGGCGAGTGGAGGAGTAACAAATCAACCCCATTTATGGAGTCTTCTCTATATCCCATCTCAATCAACACATTCAACTCGGGTACGCAAAATTTCCCTTCCTCTAGAACTTAA

mRNA sequence

ATGACGGGTTTGTTCTATTTAAGTGAAAAACAAGAGGAAAATCAAGAACAAAGAGGAAGAGAACAGCAATTGTTCTTGTCCAAGGGCTTGGAGATATGGCCACAACAAAATCTAGAGAATTACATTTCATTTGGAGTGGGTCCGAGTCGGAGGAACTTCATGATCAACGCCTCCGATCGTCACGATCAGTTTGTCCCGAGATTAGGGTTTTCGATCAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGATGTAGAACTTGTTGTAAGAGCCGAGGGTTTCATTGCCAAACTCATGTCAAAAGTACTTGGGTTCCGGCTACCAAGCGCCGGGAACGGCAGCTACAACGTCACCAAATTGTTCGGCAACAATCCCGACTAGATCGACCCGATCAGACCGCTCCAGTCGACACTCCAGGGTTAGAAGTTGCGAATTTTCCAGCTGAATTCAACTCCTCAGCCGTTTTTCGGTGCGTGAAAGTCAGTGCCATCGACGATGTCGAAGAACAATTCGCATATCAAACATCAGTGAACATTGGTGGGCGTATGTTCAAAGGGATTCTTTACGACCAAGGTCCCGAAAGCACTCCAAATTTGAGCACGGGCGGCGAGAGCTCGTATTGCTACGGCGGAGAAGACGATAGTCAAGCGCTCGAGCTGGTGATCGGAGCGTCGAACGGCGAGTGGAGGAGTAACAAATCAACCCCATTTATGGAGTCTTCTCTATATCCCATCTCAATCAACACATTCAACTCGGGTACGCAAAATTTCCCTTCCTCTAGAACTTAA

Coding sequence (CDS)

ATGACGGGTTTGTTCTATTTAAGTGAAAAACAAGAGGAAAATCAAGAACAAAGAGGAAGAGAACAGCAATTGTTCTTGTCCAAGGGCTTGGAGATATGGCCACAACAAAATCTAGAGAATTACATTTCATTTGGAGTGGGTCCGAGTCGGAGGAACTTCATGATCAACGCCTCCGATCGTCACGATCAGTTTGTCCCGAGATTAGGGTTTTCGATCAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGATGTAGAACTTGTTGTAAGAGCCGAGGGTTTCATTGCCAAACTCATGTCAAAAGTACTTGGGTTCCGGCTACCAAGCGCCGGGAACGGCAGCTACAACGTCACCAAATTGTTCGGCAACAATCCCGACTAGATCGACCCGATCAGACCGCTCCAGTCGACACTCCAGGGTTAGAAGTTGCGAATTTTCCAGCTGAATTCAACTCCTCAGCCGTTTTTCGGTGCGTGAAAGTCAGTGCCATCGACGATGTCGAAGAACAATTCGCATATCAAACATCAGTGAACATTGGTGGGCGTATGTTCAAAGGGATTCTTTACGACCAAGGTCCCGAAAGCACTCCAAATTTGAGCACGGGCGGCGAGAGCTCGTATTGCTACGGCGGAGAAGACGATAGTCAAGCGCTCGAGCTGGTGATCGGAGCGTCGAACGGCGAGTGGAGGAGTAACAAATCAACCCCATTTATGGAGTCTTCTCTATATCCCATCTCAATCAACACATTCAACTCGGGTACGCAAAATTTCCCTTCCTCTAGAACTTAA

Protein sequence

MTGLFYLSEKQEENQEQRGREQQLFLSKGLEIWPQQNLENYISFGVGPSRRNFMINASDRHDQFVPRLGFSINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSRLDRPDQTAPVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILYDQGPESTPNLSTGGESSYCYGGEDDSQALELVIGASNGEWRSNKSTPFMESSLYPISINTFNSGTQNFPSSRT

Homology

[Close]

BLAST of Cp4.1LG15g02550 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.6e-50
Identity = 132/286 (46.15%), Postives = 165/286 (57.69%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPSRRN-FMIN-------ASDRHDQFVPRLGFS------INCQDC 94
           QQ L+ Y S    GVGPS  N F I+       A       + R G S      ++CQDC
Sbjct: 88  QQRLDLYSSAAGLGVGPSNHNQFDISGETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDC 147

Query: 95  GNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQ------RHQIVRQQSR 154
           GNQAKKDCSH+RCRTCCKSRGF C THV+STWVPA KRRERQ Q      + Q+ R +S 
Sbjct: 148 GNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV 207

Query: 155 LDRPDQTAPVDT-----------PGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQT 214
             R  +  P  +            GLEV NFPAE +SSAVFRCV+VS+++D EE+FAYQT
Sbjct: 208 PKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQT 267

Query: 215 SVNIGGRMFKGILYDQGPESTP----NLSTGGESSYCYGGEDDSQALELVIGASNGEWRS 268
           +V+IGG +FKGILYD GP S+     N+   GESS   GG   +Q L L+   S     +
Sbjct: 268 AVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGG---AQQLNLITAGSVTVATA 327

[Close]

BLAST of Cp4.1LG15g02550 vs. Swiss-Prot
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.2e-46
Identity = 113/255 (44.31%), Postives = 146/255 (57.25%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPSRRNFMINASDRHDQFVPRLGFS-INCQDCGNQAKKDCSHLRC 94
           QQ L+ Y S    GVGPS R+ +  +           G    +CQDCGNQ+KKDCSH+RC
Sbjct: 77  QQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRC 136

Query: 95  RTCCKSRGFHCQTHVKSTWVPATKRRERQ------LQRHQI-----VRQQSRLDRPDQTA 154
           RTCCKSRG  C THVKSTWVPA KRRERQ       Q  Q+      RQ+ R+     + 
Sbjct: 137 RTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSM 196

Query: 155 PV------DTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGIL 214
                   +T GLEV NFP E +SSAVFRCV+VS++DD EE++AY+T+V+IGG +FKG+L
Sbjct: 197 AYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVL 256

Query: 215 YDQGPESTPNLSTGGESSYCYGGEDDSQALELVIGASNGEWRSNKSTPFMESSL-YPISI 268
           YDQGP    +   G +          + +    +  +NG   S        +SL YP  I
Sbjct: 257 YDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPI 316

[Close]

BLAST of Cp4.1LG15g02550 vs. Swiss-Prot
Match: SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.9e-44
Identity = 136/353 (38.53%), Postives = 172/353 (48.73%), Query Frame = 1


Query: 1   MTGLFYL--------SEKQEENQEQRGREQQ-----LFL--------SKGLEIWPQQNLE 60
           M G FYL        + KQ+ +Q  +    Q     L+L        +KG EIWP Q  +
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  ------------------NYISFGVGPS----------RRNFMINASDRHDQ---FVPRL 120
                             N+ SFG+ PS           R+   N    H+     V R 
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 GFSINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRER-----QLQRH 180
           G  +NCQDCGNQAKKDC H+RCRTCCKSRGFHCQTHVKSTWVPA KRRER      LQ H
Sbjct: 121 G-GMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHH 180

Query: 181 QI----------VRQQSRLDRPDQ--------TAPVDT--------PGLEVA-NFPAEFN 240
                       +R+ S  D  D         +A  +T         GLEV+ + P E N
Sbjct: 181 SASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVN 240

Query: 241 SSAVFRCVKVSAI--DDVEEQFAYQTSVNIGGRMFKGILYDQGPESTPNLSTGGESSYCY 268
           S A+FRCV+VS+I  D+ ++ +AYQT+VNIGG +FKGILYDQGPE   N      +S   
Sbjct: 241 SPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTAT 300

[Close]

BLAST of Cp4.1LG15g02550 vs. Swiss-Prot
Match: SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-42
Identity = 134/347 (38.62%), Postives = 171/347 (49.28%), Query Frame = 1


Query: 1   MTGLFYLS----EKQEENQEQRGREQQ----LFL--------SKGLEIWPQQNLE----- 60
           M GLFYL      KQ+ +QE+   E +    L+L        +KG EI+P Q  +     
Sbjct: 1   MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQQ 60

Query: 61  -------NYISFGVGPSRRNFMINASDRHDQF------------------VPRLGFSINC 120
                  N  SFG+ PS  N   N S     +                  V R G ++NC
Sbjct: 61  NHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQG-NMNC 120

Query: 121 QDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSR--- 180
           QDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV A KRRERQ Q   +  ++ R   
Sbjct: 121 QDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDAN 180

Query: 181 ---------LDRPDQ---------------TAPVDTPGLEVANFPAEFNSSAVFRCVKVS 240
                     D+ D+                    + GLE ++ P E +S AVFRC++VS
Sbjct: 181 SRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVS 240

Query: 241 AIDDVEEQFAYQTSVNIGGRMFKGILYDQGPESTP---NLSTGGESSYCYG-GEDDSQAL 267
           +IDD +E++AYQT+V+IGG +FKGILYDQGP S     + S  GE+S+ +     DS   
Sbjct: 241 SIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPS 300

[Close]

BLAST of Cp4.1LG15g02550 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 106/279 (37.99%), Postives = 143/279 (51.25%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQR----------GREQQLFLSKGLEIW---PQQNLEN 60
           M G+F L        +++EENQ+Q+               +  S   ++W   P+Q L +
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  YISFGVGPSRRNFMINASDRHDQFVPRLGFSINCQDCGNQAKKDCSHLRCRTCCKSRGFH 120
           + S     S   +  +  D  D        +I+C+DCGNQAKKDC+H+RCRTCCKSRGF 
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CQTHVKSTWVPATKRRERQLQRH--------------------QIVRQQSRLDRPDQTA- 180
           C THV+STW+P  +RRERQ Q H                     I ++      P  ++ 
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 ---PVDTPGLEV--ANFPAEFNSSAVFRCVKVSAIDD-VEEQFAYQTSVNIGGRMFKGIL 233
              P  + GLE+  A+FP E +S A+FRCVK+S +DD  + Q+AYQT+VNIGG +FKGIL
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGIL 240

[Close]

BLAST of Cp4.1LG15g02550 vs. TrEMBL
Match: A0A0A0K1X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051450 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-96
Identity = 207/319 (64.89%), Postives = 232/319 (72.73%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQEQR---GREQQLFL-------------SKGLEIWPQQNLENYISF 60
           M GL YL  KQEE++E+    GREQQLFL             SKGLEIWPQQN+ENYISF
Sbjct: 1   MRGLLYLGGKQEEDEEESLRSGREQQLFLYSTNNNNNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GV-GPSRRNFMINASDRHDQFVPRLGFSI-----------NCQDCGNQAKKDCSHLRCRT 120
           GV GP+R+N +INASD   +FV RLGFS+           NCQDCGNQAKKDCSHLRCRT
Sbjct: 61  GVVGPTRKNLIINASDH--EFVSRLGFSMMRGGSGGGGGMNCQDCGNQAKKDCSHLRCRT 120

Query: 121 CCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIV----RQQSRLDRPDQT---------- 180
           CCKSRGF CQTHVKSTWVPA KRRERQ QRHQI     RQQS+ ++ DQT          
Sbjct: 121 CCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRLGENQP 180

Query: 181 ---APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILYD 240
               P  T GL+VA+FPAEFNS A FRCVKVSAID+VEEQ AYQTSVN+GG MFKGILYD
Sbjct: 181 LLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYD 240

Query: 241 QGPESTPNLS--TGGESSYCYGGEDDSQALELVIGASNGEWR---SNKSTPFMESSLYPI 268
            GPES+ N+S   GGESSYC+ GEDDSQ L+LVIGASNG  R   S+ S PF+ESSLYPI
Sbjct: 241 HGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300

[Close]

BLAST of Cp4.1LG15g02550 vs. TrEMBL
Match: A0A0A0LDI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865400 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 8.6e-88
Identity = 195/310 (62.90%), Postives = 215/310 (69.35%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQE-QRGR-EQQLFL------------SKGLEIWPQ----------- 60
           MT LFYL  KQE++ E QR R EQQLFL            SK  +IWPQ           
Sbjct: 1   MTELFYLDRKQEDDPENQRARSEQQLFLYNSRSNNPQQICSKEFQIWPQYYSHHNQHPPH 60

Query: 61  QNLENYISFGVGPSRRN-FMINASDRHDQFVPRLGFSI------------NCQDCGNQAK 120
           QN+ENYISFGVGPSRR+  MINA D HD FV R GF++            NCQDCGNQAK
Sbjct: 61  QNVENYISFGVGPSRRSSLMINAFD-HD-FVSRSGFTMTKHSGGGRGGGMNCQDCGNQAK 120

Query: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQS----RLDRPDQT 180
           KDCSHLRCRTCCKSRGFHCQTHVKSTWVPA KRRERQ QRHQ    Q+      + P   
Sbjct: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRHQQSSDQTVPKIHRENPPSL 180

Query: 181 APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILYDQGP 240
               T GLE  NF  EFNSSAVFRCVKVSAID+VEEQ AYQT+VNIGG MFKGILYDQGP
Sbjct: 181 TVTTTSGLEHGNFQGEFNSSAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGP 240

Query: 241 ESTPNLSTGGESSYCYGGEDDSQALELVIGASNGEWR-SNKSTPFMESSLYPISINTFNS 268
           E + NLSTGG+      GED  + L+LVIGASNG  R +N+STPF+ESSLYPI IN+FN+
Sbjct: 241 EYSQNLSTGGD------GEDGGEGLDLVIGASNGSGRVNNQSTPFVESSLYPIPINSFNN 300

[Close]

BLAST of Cp4.1LG15g02550 vs. TrEMBL
Match: A0A0A0LNQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G364580 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.3e-64
Identity = 163/351 (46.44%), Postives = 200/351 (56.98%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQRGREQQLFL--------SKGLEIWPQQ--------- 60
           M G FYL         KQEE++E+R  EQ LFL        +KG EIWPQQ         
Sbjct: 1   MAGFFYLGGGREGPPNKQEEDEEER--EQNLFLYRNDQEIYNKGFEIWPQQYNNNNNHQH 60

Query: 61  -----NLENYISFGVGPSRRNFMIN-ASDRHDQFVPRL-----------------GFSIN 120
                +L N++SFGVGPSRR+FMIN  SD   +    L                    +N
Sbjct: 61  QQPNPSLPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAAFAAAAASAATAGGMN 120

Query: 121 CQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQ----RHQIVRQQ 180
           CQDCGNQAKKDC++LRCRTCCKSRGF CQTHVKSTWVPA KRRERQ Q    +HQ  ++Q
Sbjct: 121 CQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQHQQQQEQ 180

Query: 181 ------SRLDRPDQTA-----------------PVDTPGLEVANFPAEFNSSAVFRCVKV 240
                 S+  R  QTA                 P  T GLE+A FP+E NS AVFRCVKV
Sbjct: 181 FRGGDNSKRLRETQTATAIAAAPTASASACPRLPSITSGLELAQFPSEVNSPAVFRCVKV 240

Query: 241 SAIDDVEEQFAYQTSVNIGGRMFKGILYDQGPESTPNLSTGGESSYCYGGEDDSQALELV 268
           SA+DD +E+FAYQT+VNIGG +FKGILYDQGPE     +  GESS  +GG+  +  L L+
Sbjct: 241 SAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEL--RYTAAGESSSGHGGDGSTHPLNLI 300

[Close]

BLAST of Cp4.1LG15g02550 vs. TrEMBL
Match: E6NU70_JATCU (JHL18I08.14 protein OS=Jatropha curcas GN=JHL18I08.14 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.5e-63
Identity = 162/327 (49.54%), Postives = 195/327 (59.63%), Query Frame = 1


Query: 1   MTGLFYLSEKQ----EENQEQRGREQQLFL---------SKGLEIWPQ-----QNLENYI 60
           M G FYLS ++     +  E + +E  LFL         +KG EIWPQ     QN+ NY 
Sbjct: 1   MAGWFYLSGREGAVTSKQGEDKNQENNLFLYRSNNEQIYNKGFEIWPQYYHQQQNMNNYS 60

Query: 61  SFGVGPSRRNFMINASDRHDQFVPRLGF------SINCQDCGNQAKKDCSHLRCRTCCKS 120
           SFGVGPSRR+F  + S R    V R G        +NCQDCGNQAKKDC+HLRCRTCCKS
Sbjct: 61  SFGVGPSRRSFS-DESSRSGFTVMRQGGLGGGGGGMNCQDCGNQAKKDCAHLRCRTCCKS 120

Query: 121 RGFHCQTHVKSTWVPATKRRERQL-------------QRHQIVRQQSRLDRPDQT----- 180
           RGF CQTHVKSTWVPA KRRERQ              Q+HQ  +QQ R + P +      
Sbjct: 121 RGFQCQTHVKSTWVPAAKRRERQQQLSALQQQQQHQEQQHQQQQQQFRGENPKRQRENQG 180

Query: 181 -AP--------VDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMF 240
            AP          T GLEVA+FP E NS AVFRCVKVSA+DD +EQFAYQT+VNIGG MF
Sbjct: 181 GAPSLACTRLGTTTSGLEVAHFPPEVNSPAVFRCVKVSAMDDADEQFAYQTAVNIGGHMF 240

Query: 241 KGILYDQGPESTPNLSTGGESSYCYGGEDDSQALELVIGASNGEWRSNKSTPFME----- 268
           +G+LYDQGP+S    ++GGESS   GG   +Q L L+  A+     S ++TP  +     
Sbjct: 241 RGLLYDQGPDS--RYTSGGESS--SGG---AQQLNLITAATT----STEATPSNQQGTGA 300

[Close]

BLAST of Cp4.1LG15g02550 vs. TrEMBL
Match: V4TF82_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001824mg PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.1e-62
Identity = 152/336 (45.24%), Postives = 195/336 (58.04%), Query Frame = 1


Query: 1   MTGLFYLSEKQE---ENQEQRGREQQLFL------------SKGLEIWPQ------QNLE 60
           M G FYL  ++E   + +E+  +E+ L+L            +KG E+WPQ      +N+ 
Sbjct: 1   MAGWFYLGGREEARSKQEEEEEKEENLYLYRSSANEEIYNSTKGFELWPQYYHQQQENMS 60

Query: 61  NYISFGVGPSRRNF--MINASDRHDQ------FVPRLGFS---------INCQDCGNQAK 120
           NY+SFGVGPSRR+    INA+   D+      FV R G           +NCQDCGNQAK
Sbjct: 61  NYLSFGVGPSRRSSSNFINAAAASDESSRSGGFVMRQGVGGGGGGGGGGMNCQDCGNQAK 120

Query: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQ-----LQRHQIVRQQSRLDRPDQ 180
           KDC H+RCRTCCKSRGF CQTHVKSTWVPA KRRERQ     LQRHQ  ++Q +L++ D 
Sbjct: 121 KDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQRHQQQQEQQQLNQQDS 180

Query: 181 -----------------TAPVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQT 240
                                +  GLEV+ FP+E +SSAVFRCV+VSAIDD +E+FAYQT
Sbjct: 181 QHHHHHHQQQQFRGENPKRQRENQGLEVSQFPSELSSSAVFRCVRVSAIDDPDEEFAYQT 240

Query: 241 SVNIGGRMFKGILYDQGPESTPNLSTGGESSYCYGGEDDSQALELVIGASN--------- 268
           +V+IGG +FKGILYDQGPE+    +   ESS+       SQ L L+  A+          
Sbjct: 241 AVHIGGHVFKGILYDQGPEN--RYTAAAESSH-------SQQLNLITAATATTTTTTGTV 300

[Close]

BLAST of Cp4.1LG15g02550 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 201.1 bits (510), Expect = 8.9e-52
Identity = 132/286 (46.15%), Postives = 165/286 (57.69%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPSRRN-FMIN-------ASDRHDQFVPRLGFS------INCQDC 94
           QQ L+ Y S    GVGPS  N F I+       A       + R G S      ++CQDC
Sbjct: 88  QQRLDLYSSAAGLGVGPSNHNQFDISGETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDC 147

Query: 95  GNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQ------RHQIVRQQSR 154
           GNQAKKDCSH+RCRTCCKSRGF C THV+STWVPA KRRERQ Q      + Q+ R +S 
Sbjct: 148 GNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV 207

Query: 155 LDRPDQTAPVDT-----------PGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQT 214
             R  +  P  +            GLEV NFPAE +SSAVFRCV+VS+++D EE+FAYQT
Sbjct: 208 PKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQT 267

Query: 215 SVNIGGRMFKGILYDQGPESTP----NLSTGGESSYCYGGEDDSQALELVIGASNGEWRS 268
           +V+IGG +FKGILYD GP S+     N+   GESS   GG   +Q L L+   S     +
Sbjct: 268 AVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGG---AQQLNLITAGSVTVATA 327

[Close]

BLAST of Cp4.1LG15g02550 vs. TAIR10
Match: AT5G66350.1 (AT5G66350.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47
Identity = 113/255 (44.31%), Postives = 146/255 (57.25%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPSRRNFMINASDRHDQFVPRLGFS-INCQDCGNQAKKDCSHLRC 94
           QQ L+ Y S    GVGPS R+ +  +           G    +CQDCGNQ+KKDCSH+RC
Sbjct: 77  QQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRC 136

Query: 95  RTCCKSRGFHCQTHVKSTWVPATKRRERQ------LQRHQI-----VRQQSRLDRPDQTA 154
           RTCCKSRG  C THVKSTWVPA KRRERQ       Q  Q+      RQ+ R+     + 
Sbjct: 137 RTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSM 196

Query: 155 PV------DTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGIL 214
                   +T GLEV NFP E +SSAVFRCV+VS++DD EE++AY+T+V+IGG +FKG+L
Sbjct: 197 AYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVL 256

Query: 215 YDQGPESTPNLSTGGESSYCYGGEDDSQALELVIGASNGEWRSNKSTPFMESSL-YPISI 268
           YDQGP    +   G +          + +    +  +NG   S        +SL YP  I
Sbjct: 257 YDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPI 316

[Close]

BLAST of Cp4.1LG15g02550 vs. TAIR10
Match: AT1G75520.1 (AT1G75520.1 SHI-related sequence 5)

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-45
Identity = 136/353 (38.53%), Postives = 172/353 (48.73%), Query Frame = 1


Query: 1   MTGLFYL--------SEKQEENQEQRGREQQ-----LFL--------SKGLEIWPQQNLE 60
           M G FYL        + KQ+ +Q  +    Q     L+L        +KG EIWP Q  +
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  ------------------NYISFGVGPS----------RRNFMINASDRHDQ---FVPRL 120
                             N+ SFG+ PS           R+   N    H+     V R 
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 GFSINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRER-----QLQRH 180
           G  +NCQDCGNQAKKDC H+RCRTCCKSRGFHCQTHVKSTWVPA KRRER      LQ H
Sbjct: 121 G-GMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHH 180

Query: 181 QI----------VRQQSRLDRPDQ--------TAPVDT--------PGLEVA-NFPAEFN 240
                       +R+ S  D  D         +A  +T         GLEV+ + P E N
Sbjct: 181 SASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVN 240

Query: 241 SSAVFRCVKVSAI--DDVEEQFAYQTSVNIGGRMFKGILYDQGPESTPNLSTGGESSYCY 268
           S A+FRCV+VS+I  D+ ++ +AYQT+VNIGG +FKGILYDQGPE   N      +S   
Sbjct: 241 SPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTAT 300

[Close]

BLAST of Cp4.1LG15g02550 vs. TAIR10
Match: AT1G19790.1 (AT1G19790.1 SHI-related sequence 7)

HSP 1 Score: 174.5 bits (441), Expect = 8.9e-44
Identity = 134/347 (38.62%), Postives = 171/347 (49.28%), Query Frame = 1


Query: 1   MTGLFYLS----EKQEENQEQRGREQQ----LFL--------SKGLEIWPQQNLE----- 60
           M GLFYL      KQ+ +QE+   E +    L+L        +KG EI+P Q  +     
Sbjct: 1   MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQQ 60

Query: 61  -------NYISFGVGPSRRNFMINASDRHDQF------------------VPRLGFSINC 120
                  N  SFG+ PS  N   N S     +                  V R G ++NC
Sbjct: 61  NHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQG-NMNC 120

Query: 121 QDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSR--- 180
           QDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV A KRRERQ Q   +  ++ R   
Sbjct: 121 QDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDAN 180

Query: 181 ---------LDRPDQ---------------TAPVDTPGLEVANFPAEFNSSAVFRCVKVS 240
                     D+ D+                    + GLE ++ P E +S AVFRC++VS
Sbjct: 181 SRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVS 240

Query: 241 AIDDVEEQFAYQTSVNIGGRMFKGILYDQGPESTP---NLSTGGESSYCYG-GEDDSQAL 267
           +IDD +E++AYQT+V+IGG +FKGILYDQGP S     + S  GE+S+ +     DS   
Sbjct: 241 SIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPS 300

[Close]

BLAST of Cp4.1LG15g02550 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 161.8 bits (408), Expect = 6.0e-40
Identity = 106/279 (37.99%), Postives = 143/279 (51.25%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQR----------GREQQLFLSKGLEIW---PQQNLEN 60
           M G+F L        +++EENQ+Q+               +  S   ++W   P+Q L +
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  YISFGVGPSRRNFMINASDRHDQFVPRLGFSINCQDCGNQAKKDCSHLRCRTCCKSRGFH 120
           + S     S   +  +  D  D        +I+C+DCGNQAKKDC+H+RCRTCCKSRGF 
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CQTHVKSTWVPATKRRERQLQRH--------------------QIVRQQSRLDRPDQTA- 180
           C THV+STW+P  +RRERQ Q H                     I ++      P  ++ 
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 ---PVDTPGLEV--ANFPAEFNSSAVFRCVKVSAIDD-VEEQFAYQTSVNIGGRMFKGIL 233
              P  + GLE+  A+FP E +S A+FRCVK+S +DD  + Q+AYQT+VNIGG +FKGIL
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGIL 240

[Close]

BLAST of Cp4.1LG15g02550 vs. NCBI nr
Match: gi|449438526|ref|XP_004137039.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 3.2e-96
Identity = 207/319 (64.89%), Postives = 232/319 (72.73%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQEQR---GREQQLFL-------------SKGLEIWPQQNLENYISF 60
           M GL YL  KQEE++E+    GREQQLFL             SKGLEIWPQQN+ENYISF
Sbjct: 1   MRGLLYLGGKQEEDEEESLRSGREQQLFLYSTNNNNNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GV-GPSRRNFMINASDRHDQFVPRLGFSI-----------NCQDCGNQAKKDCSHLRCRT 120
           GV GP+R+N +INASD   +FV RLGFS+           NCQDCGNQAKKDCSHLRCRT
Sbjct: 61  GVVGPTRKNLIINASDH--EFVSRLGFSMMRGGSGGGGGMNCQDCGNQAKKDCSHLRCRT 120

Query: 121 CCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIV----RQQSRLDRPDQT---------- 180
           CCKSRGF CQTHVKSTWVPA KRRERQ QRHQI     RQQS+ ++ DQT          
Sbjct: 121 CCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRLGENQP 180

Query: 181 ---APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILYD 240
               P  T GL+VA+FPAEFNS A FRCVKVSAID+VEEQ AYQTSVN+GG MFKGILYD
Sbjct: 181 LLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYD 240

Query: 241 QGPESTPNLS--TGGESSYCYGGEDDSQALELVIGASNGEWR---SNKSTPFMESSLYPI 268
            GPES+ N+S   GGESSYC+ GEDDSQ L+LVIGASNG  R   S+ S PF+ESSLYPI
Sbjct: 241 HGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300

[Close]

BLAST of Cp4.1LG15g02550 vs. NCBI nr
Match: gi|659110505|ref|XP_008455259.1| (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 1.8e-94
Identity = 206/321 (64.17%), Postives = 229/321 (71.34%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQEQ---RGREQQLFL-------------SKGLEIWPQQNLENYISF 60
           M GL YL  KQEE++E+    GREQQLFL             SKGLEIWPQQN+ENYISF
Sbjct: 1   MRGLLYLGGKQEEDEEEILRSGREQQLFLYSSTNNHNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GV-GPSRRNFMINASDRHDQFVPRLGFSI------------NCQDCGNQAKKDCSHLRCR 120
           GV GP+R+N +INASD   + V RLGFS+            NCQDCGNQAKKDCSHLRCR
Sbjct: 61  GVVGPTRKNLIINASDH--ELVSRLGFSMMRGGGGGGGGGMNCQDCGNQAKKDCSHLRCR 120

Query: 121 TCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIV----RQQSRLDRPDQT--------- 180
           TCCKSRGF CQTHVKSTWVPA KRRERQ QRHQI     RQQS+ ++ DQT         
Sbjct: 121 TCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRYGENQ 180

Query: 181 ----APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILY 240
                P  T GLEVA+FPAEFNS A FRCVKVSAID+VEEQ AYQTSVNIGG MFKGILY
Sbjct: 181 PLLATPTVTSGLEVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILY 240

Query: 241 DQGPESTPNLS--TGGE-SSYCYGGEDDSQALELVIGASNGEWR---SNKSTPFMESSLY 267
           D GPE++ N+S   GGE SSYC+GGEDDSQ L+LVIGASNG  R   S+ S PF+ESSLY
Sbjct: 241 DHGPETSQNMSIDIGGESSSYCHGGEDDSQPLDLVIGASNGSGRVSQSSSSAPFVESSLY 300

[Close]

BLAST of Cp4.1LG15g02550 vs. NCBI nr
Match: gi|778686710|ref|XP_004147842.2| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 1.2e-87
Identity = 195/310 (62.90%), Postives = 215/310 (69.35%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQE-QRGR-EQQLFL------------SKGLEIWPQ----------- 60
           MT LFYL  KQE++ E QR R EQQLFL            SK  +IWPQ           
Sbjct: 1   MTELFYLDRKQEDDPENQRARSEQQLFLYNSRSNNPQQICSKEFQIWPQYYSHHNQHPPH 60

Query: 61  QNLENYISFGVGPSRRN-FMINASDRHDQFVPRLGFSI------------NCQDCGNQAK 120
           QN+ENYISFGVGPSRR+  MINA D HD FV R GF++            NCQDCGNQAK
Sbjct: 61  QNVENYISFGVGPSRRSSLMINAFD-HD-FVSRSGFTMTKHSGGGRGGGMNCQDCGNQAK 120

Query: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQS----RLDRPDQT 180
           KDCSHLRCRTCCKSRGFHCQTHVKSTWVPA KRRERQ QRHQ    Q+      + P   
Sbjct: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRHQQSSDQTVPKIHRENPPSL 180

Query: 181 APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILYDQGP 240
               T GLE  NF  EFNSSAVFRCVKVSAID+VEEQ AYQT+VNIGG MFKGILYDQGP
Sbjct: 181 TVTTTSGLEHGNFQGEFNSSAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGP 240

Query: 241 ESTPNLSTGGESSYCYGGEDDSQALELVIGASNGEWR-SNKSTPFMESSLYPISINTFNS 268
           E + NLSTGG+      GED  + L+LVIGASNG  R +N+STPF+ESSLYPI IN+FN+
Sbjct: 241 EYSQNLSTGGD------GEDGGEGLDLVIGASNGSGRVNNQSTPFVESSLYPIPINSFNN 300

[Close]

BLAST of Cp4.1LG15g02550 vs. NCBI nr
Match: gi|659133021|ref|XP_008466512.1| (PREDICTED: protein SHI RELATED SEQUENCE 3-like [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 8.8e-86
Identity = 197/316 (62.34%), Postives = 220/316 (69.62%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQE-QRGR-EQQLFL------------SKGLEIWPQ----------Q 60
           MT LFYL  KQE++ E QR R EQQLFL            SK  +IWPQ          Q
Sbjct: 1   MTELFYLDRKQEDDPENQRTRSEQQLFLYNGRSNNPQQIYSKEFQIWPQYYSHNHHLPNQ 60

Query: 61  NLENYISFGVGPSRRN-FMINASDRHDQFVPRLGFSI------------NCQDCGNQAKK 120
           N+ENYISFGVGPSRR+  MINA D HD FV R GF++            NCQDCGNQAKK
Sbjct: 61  NVENYISFGVGPSRRSSLMINAFD-HD-FVSRSGFTMTRHSGGGGGGGMNCQDCGNQAKK 120

Query: 121 DCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQS----------RLD 180
           DCSHLRCRTCCKSRGFHCQTHVKSTWVPA KRRERQ QRHQ +R             R +
Sbjct: 121 DCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRHQQLRADQSSDQTVPKIHRAN 180

Query: 181 RPDQTAPVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGIL 240
           +P  T P  T GLE+ NF  EFNSSAVFRCVKVSAID+VEEQ AYQT+VNIGG MFKGIL
Sbjct: 181 QPSLT-PTITSGLELGNFQGEFNSSAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGIL 240

Query: 241 YDQGPESTP-NLSTGGESSYCYGGEDDSQALELVIGASNGEWR-SNKSTPFMESSLYPIS 268
           YDQGPE+   NLS+GG+      GE+D Q L+LVIGASN   R +N+STPF+ESSLYPI 
Sbjct: 241 YDQGPENNQINLSSGGD------GENDGQGLDLVIGASNCSGRVNNQSTPFVESSLYPIP 300

[Close]

BLAST of Cp4.1LG15g02550 vs. NCBI nr
Match: gi|449470120|ref|XP_004152766.1| (PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 1.9e-64
Identity = 163/351 (46.44%), Postives = 200/351 (56.98%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQRGREQQLFL--------SKGLEIWPQQ--------- 60
           M G FYL         KQEE++E+R  EQ LFL        +KG EIWPQQ         
Sbjct: 1   MAGFFYLGGGREGPPNKQEEDEEER--EQNLFLYRNDQEIYNKGFEIWPQQYNNNNNHQH 60

Query: 61  -----NLENYISFGVGPSRRNFMIN-ASDRHDQFVPRL-----------------GFSIN 120
                +L N++SFGVGPSRR+FMIN  SD   +    L                    +N
Sbjct: 61  QQPNPSLPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAAFAAAAASAATAGGMN 120

Query: 121 CQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQ----RHQIVRQQ 180
           CQDCGNQAKKDC++LRCRTCCKSRGF CQTHVKSTWVPA KRRERQ Q    +HQ  ++Q
Sbjct: 121 CQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQHQQQQEQ 180

Query: 181 ------SRLDRPDQTA-----------------PVDTPGLEVANFPAEFNSSAVFRCVKV 240
                 S+  R  QTA                 P  T GLE+A FP+E NS AVFRCVKV
Sbjct: 181 FRGGDNSKRLRETQTATAIAAAPTASASACPRLPSITSGLELAQFPSEVNSPAVFRCVKV 240

Query: 241 SAIDDVEEQFAYQTSVNIGGRMFKGILYDQGPESTPNLSTGGESSYCYGGEDDSQALELV 268
           SA+DD +E+FAYQT+VNIGG +FKGILYDQGPE     +  GESS  +GG+  +  L L+
Sbjct: 241 SAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEL--RYTAAGESSSGHGGDGSTHPLNLI 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SRS1_ARATH	1.6e-50	46.15	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2	[more]
SHI_ARATH	5.2e-46	44.31	Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1	[more]
SRS5_ARATH	2.9e-44	38.53	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1	[more]
SRS7_ARATH	1.6e-42	38.62	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1	[more]
SRS2_ARATH	1.1e-38	37.99	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1	[more]

BLAST of Cp4.1LG15g02550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1X2_CUCSA	2.3e-96	64.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051450 PE=4 SV=1	[more]
A0A0A0LDI9_CUCSA	8.6e-88	62.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865400 PE=4 SV=1	[more]
A0A0A0LNQ5_CUCSA	1.3e-64	46.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G364580 PE=4 SV=1	[more]
E6NU70_JATCU	2.5e-63	49.54	JHL18I08.14 protein OS=Jatropha curcas GN=JHL18I08.14 PE=4 SV=1	[more]
V4TF82_9ROSI	8.1e-62	45.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001824mg PE=4 SV=1	[more]

BLAST of Cp4.1LG15g02550 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51060.1	8.9e-52	46.15	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	2.9e-47	44.31	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	1.6e-45	38.53	SHI-related sequence 5	[more]
AT1G19790.1	8.9e-44	38.62	SHI-related sequence 7	[more]
AT4G36260.1	6.0e-40	37.99	Lateral root primordium (LRP) protein-related	[more]

BLAST of Cp4.1LG15g02550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438526\|ref\|XP_004137039.1\|	3.2e-96	64.89	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus]	[more]
gi\|659110505\|ref\|XP_008455259.1\|	1.8e-94	64.17	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo]	[more]
gi\|778686710\|ref\|XP_004147842.2\|	1.2e-87	62.90	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus]	[more]
gi\|659133021\|ref\|XP_008466512.1\|	8.8e-86	62.34	PREDICTED: protein SHI RELATED SEQUENCE 3-like [Cucumis melo]	[more]
gi\|449470120\|ref\|XP_004152766.1\|	1.9e-64	46.44	PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007818	SHI
IPR006511	SHI_C
IPR006510	Znf_LRP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02550.1	Cp4.1LG15g02550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAMs	TIGR01623	TIGR01623	coord: 73..115 score: 7.9
IPR006511	Lateral Root Primordium type 1, C-terminal	TIGRFAMs	TIGR01624	TIGR01624	coord: 151..198 score: 4.4
IPR007818	Protein of unknown function DUF702	PFAM	PF05142	DUF702	coord: 71..199 score: 9.5
None	No IPR available	PANTHER	PTHR31604	FAMILY NOT NAMED	coord: 28..267 score: 3.9E
None	No IPR available	PANTHER	PTHR31604:SF6	SUBFAMILY NOT NAMED	coord: 28..267 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG15g02550	Cucsa.345910	Cucumber (Gy14) v1	cgycpeB0903
Cp4.1LG15g02550	CmaCh19G002830	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g02550	CmoCh19G003110	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g02550	Cla009422	Watermelon (97103) v1	cpewmB247
Cp4.1LG15g02550	Csa7G051450	Cucumber (Chinese Long) v2	cpecuB261
Cp4.1LG15g02550	MELO3C018686	Melon (DHL92) v3.5.1	cpemeB217
Cp4.1LG15g02550	ClCG09G013590	Watermelon (Charleston Gray)	cpewcgB219
Cp4.1LG15g02550	CSPI07G05110	Wild cucumber (PI 183967)	cpecpiB262
Cp4.1LG15g02550	Lsi03G008150	Bottle gourd (USVL1VR-Ls)	cpelsiB206
Cp4.1LG15g02550	MELO3C018686.2	Melon (DHL92) v3.6.1	cpemedB256
Cp4.1LG15g02550	CsaV3_7G006060	Cucumber (Chinese Long) v3	cpecucB0326
Cp4.1LG15g02550	CsGy7G004670	Cucumber (Gy14) v2	cgybcpeB914
Cp4.1LG15g02550	Carg24585	Silver-seed gourd	carcpeB0919

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g02550	Cucurbita pepo (Zucchini)	cpecpeB268
Cp4.1LG15g02550	Cucurbita maxima (Rimu)	cmacpeB120
Cp4.1LG15g02550	Cucurbita moschata (Rifu)	cmocpeB094
Cp4.1LG15g02550	Cucumber (Gy14) v2	cgybcpeB752
Cp4.1LG15g02550	Silver-seed gourd	carcpeB1034
Cp4.1LG15g02550	Wax gourd	cpewgoB0329