CmoCh19G003110 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G003110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SHI-related sequence 7, putative
Location	Cmo_Chr19 : 2339193 .. 2340366 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACAAGAGACAGAGACAGTTTTGGTTTAGCTGTAACGATTCTCAGTACTTAACACGGCGGCGTTTGCAATCCACCTTCCAAATTCCTCCGGTACCCTCCTTCTCTCTCTCTCTCTAAACCCTAAAAACCCTAATAACCTTCGTGAATGACCTAAATAATATTGGGTTGTAGAAATCATGACGGGGTTGTTCTATTTAAGTGAAAAACAAGAGGAAAATCAAGAACAAAGAGGAAGAGAACAGCAATTGTTCTTGTCCAAGGGCTTGGAGATATGGCCACAACAAAATCTAGAGAATTACATTTCATTTGGAGTGGGTCCAACTCGGAGGAACTTCATGATCAACGCCTCCGATCGTCCCGATCAGTTTGTCCCGAGATTAGGGTTTTCGATCAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGATGTAGAACTTGTTGTAAGAGCCGAGGGTTTCATTGCCAAACTCATGTCAAAAGTACTTGGGTTCCGGCTACCAAGCGCCGGGAACGGCAACTACAACGTCACCAAATTGTTCGGCAACAATCCCAACTAGATCAGCCCGATCAGACCGCTCCGGTCGACACTCCAGGTGATTAATTTTCGATGAAATTCATAAGCTTAAGTCGAAAAATTACGATGATAATGGATGATTCAAACCCTAGGGTGAGATGGGTGTAGTGTTTCATTAGAATTACAATTATTTTTGTTCTTCTAATCGATGTGATTTGAAATTAGGGTTGGAAGTTGCGAATTTTCCAGCTGAATTCAACTCCTCAGCCGTTTTTCGGTGCGTGAAAGTCAGTGCCATCGACGATGTCGAAGAACAATTCGCATATCAAACATCAGTGAACATTGGTGGGCATATGTTCAAAGGAATTCTTTACGACCAAGGTCCTGAAAGCACTCCGAATTTGAGCACGGGCGGCGAGAGCTCGTATTGCTACGGCGGAGAAGACGATAATCAAGCGCTCGAGCTGGTGATCGGAGCATCGAACGGAGGGTGGAGGAGTAACAAACCAACCCCATTTATGGAGTCTTCTCTATATCCCATCCCAATCAACACATTCAACACGGGTACGCAAAATTTCCCTTCCTCTAGAACTTGAAAGAAAAAAGGGTTGAAGTTGATTGTGTTGAATTCATGAACTAGAAG

mRNA sequence

AGACAAGAGACAGAGACAGTTTTGGTTTAGCTGTAACGATTCTCAGTACTTAACACGGCGGCGTTTGCAATCCACCTTCCAAATTCCTCCGGTACCCTCCTTCTCTCTCTCTCTCTAAACCCTAAAAACCCTAATAACCTTCGTGAATGACCTAAATAATATTGGGTTGTAGAAATCATGACGGGGTTGTTCTATTTAAGTGAAAAACAAGAGGAAAATCAAGAACAAAGAGGAAGAGAACAGCAATTGTTCTTGTCCAAGGGCTTGGAGATATGGCCACAACAAAATCTAGAGAATTACATTTCATTTGGAGTGGGTCCAACTCGGAGGAACTTCATGATCAACGCCTCCGATCGTCCCGATCAGTTTGTCCCGAGATTAGGGTTTTCGATCAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGATGTAGAACTTGTTGTAAGAGCCGAGGGTTTCATTGCCAAACTCATGTCAAAAGTACTTGGGTTCCGGCTACCAAGCGCCGGGAACGGCAACTACAACGTCACCAAATTGTTCGGCAACAATCCCAACTAGATCAGCCCGATCAGACCGCTCCGGTCGACACTCCAGGGTTGGAAGTTGCGAATTTTCCAGCTGAATTCAACTCCTCAGCCGTTTTTCGGTGCGTGAAAGTCAGTGCCATCGACGATGTCGAAGAACAATTCGCATATCAAACATCAGTGAACATTGGTGGGCATATGTTCAAAGGAATTCTTTACGACCAAGGTCCTGAAAGCACTCCGAATTTGAGCACGGGCGGCGAGAGCTCGTATTGCTACGGCGGAGAAGACGATAATCAAGCGCTCGAGCTGGTGATCGGAGCATCGAACGGAGGGTGGAGGAGTAACAAACCAACCCCATTTATGGAGTCTTCTCTATATCCCATCCCAATCAACACATTCAACACGGGTACGCAAAATTTCCCTTCCTCTAGAACTTGAAAGAAAAAAGGGTTGAAGTTGATTGTGTTGAATTCATGAACTAGAAG

Coding sequence (CDS)

ATGACGGGGTTGTTCTATTTAAGTGAAAAACAAGAGGAAAATCAAGAACAAAGAGGAAGAGAACAGCAATTGTTCTTGTCCAAGGGCTTGGAGATATGGCCACAACAAAATCTAGAGAATTACATTTCATTTGGAGTGGGTCCAACTCGGAGGAACTTCATGATCAACGCCTCCGATCGTCCCGATCAGTTTGTCCCGAGATTAGGGTTTTCGATCAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCCCATTTGAGATGTAGAACTTGTTGTAAGAGCCGAGGGTTTCATTGCCAAACTCATGTCAAAAGTACTTGGGTTCCGGCTACCAAGCGCCGGGAACGGCAACTACAACGTCACCAAATTGTTCGGCAACAATCCCAACTAGATCAGCCCGATCAGACCGCTCCGGTCGACACTCCAGGGTTGGAAGTTGCGAATTTTCCAGCTGAATTCAACTCCTCAGCCGTTTTTCGGTGCGTGAAAGTCAGTGCCATCGACGATGTCGAAGAACAATTCGCATATCAAACATCAGTGAACATTGGTGGGCATATGTTCAAAGGAATTCTTTACGACCAAGGTCCTGAAAGCACTCCGAATTTGAGCACGGGCGGCGAGAGCTCGTATTGCTACGGCGGAGAAGACGATAATCAAGCGCTCGAGCTGGTGATCGGAGCATCGAACGGAGGGTGGAGGAGTAACAAACCAACCCCATTTATGGAGTCTTCTCTATATCCCATCCCAATCAACACATTCAACACGGGTACGCAAAATTTCCCTTCCTCTAGAACTTGA

Homology

[Close]

BLAST of CmoCh19G003110 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 4.1e-51
Identity = 132/287 (45.99%), Postives = 164/287 (57.14%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPTRRN-FMIN-------ASDRPDQFVPRLGFS------INCQDC 94
           QQ L+ Y S    GVGP+  N F I+       A       + R G S      ++CQDC
Sbjct: 88  QQRLDLYSSAAGLGVGPSNHNQFDISGETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDC 147

Query: 95  GNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSQLDQPDQ 154
           GNQAKKDCSH+RCRTCCKSRGF C THV+STWVPA KRRERQ Q+   V+ Q+QL + + 
Sbjct: 148 GNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQ-QQLATVQPQTQLPRGES 207

Query: 155 ------------------TAPVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQ 214
                             T      GLEV NFPAE +SSAVFRCV+VS+++D EE+FAYQ
Sbjct: 208 VPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQ 267

Query: 215 TSVNIGGHMFKGILYDQGPESTP----NLSTGGESSYCYGGEDDNQALELVIGASNGGWR 268
           T+V+IGGH+FKGILYD GP S+     N+   GESS   GG    Q L L+   S     
Sbjct: 268 TAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGGA---QQLNLITAGSVTVAT 327

[Close]

BLAST of CmoCh19G003110 vs. Swiss-Prot
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.5e-48
Identity = 113/255 (44.31%), Postives = 146/255 (57.25%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPTRRNFMINASDRPDQFVPRLGFS-INCQDCGNQAKKDCSHLRC 94
           QQ L+ Y S    GVGP+ R+ +  +           G    +CQDCGNQ+KKDCSH+RC
Sbjct: 77  QQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRC 136

Query: 95  RTCCKSRGFHCQTHVKSTWVPATKRRERQLQRH----------QIVRQQSQLDQPDQTAP 154
           RTCCKSRG  C THVKSTWVPA KRRERQ Q             + ++Q +      T+ 
Sbjct: 137 RTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSM 196

Query: 155 V-------DTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGIL 214
                   +T GLEV NFP E +SSAVFRCV+VS++DD EE++AY+T+V+IGGH+FKG+L
Sbjct: 197 AYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVL 256

Query: 215 YDQGPESTPNLSTGGESSYCYGGEDDNQALELVIGASNGGWRSNKPTPFMESSL-YPIPI 268
           YDQGP    +   G +            +    +  +NG   S        +SL YP PI
Sbjct: 257 YDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPI 316

[Close]

BLAST of CmoCh19G003110 vs. Swiss-Prot
Match: SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 8.9e-46
Identity = 134/352 (38.07%), Postives = 172/352 (48.86%), Query Frame = 1


Query: 1   MTGLFYL--------SEKQEENQEQRGREQQ-----LFL--------SKGLEIWPQQNLE 60
           M G FYL        + KQ+ +Q  +    Q     L+L        +KG EIWP Q  +
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  ------------------NYISFGVGPTRRN------------FMINASDRPDQFVPRLG 120
                             N+ SFG+ P+  +            F + +   P  F     
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 FSINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRER-----QLQRHQ 180
             +NCQDCGNQAKKDC H+RCRTCCKSRGFHCQTHVKSTWVPA KRRER      LQ H 
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 181 I----------VRQQSQLDQPDQ--------TAPVDT--------PGLEVA-NFPAEFNS 240
                      +R+ S  D  D         +A  +T         GLEV+ + P E NS
Sbjct: 181 ASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNS 240

Query: 241 SAVFRCVKVSAI--DDVEEQFAYQTSVNIGGHMFKGILYDQGPESTPNLSTGGESSYCYG 268
            A+FRCV+VS+I  D+ ++ +AYQT+VNIGGH+FKGILYDQGPE   N      +S    
Sbjct: 241 PAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATT 300

[Close]

BLAST of CmoCh19G003110 vs. Swiss-Prot
Match: SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.1e-43
Identity = 135/350 (38.57%), Postives = 169/350 (48.29%), Query Frame = 1


Query: 1   MTGLFYLS----EKQEENQEQRGREQQ----LFL--------SKGLEIWPQQNLE----- 60
           M GLFYL      KQ+ +QE+   E +    L+L        +KG EI+P Q  +     
Sbjct: 1   MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQQ 60

Query: 61  -------NYISFGVGPTRRNFMINASDRPDQF------------------VPRLGFSINC 120
                  N  SFG+ P+  N   N S     +                  V R G ++NC
Sbjct: 61  NHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQG-NMNC 120

Query: 121 QDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQ---------RHQI 180
           QDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV A KRRERQ Q         R   
Sbjct: 121 QDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDAN 180

Query: 181 VRQQSQLDQPD------------------QTAPVDTPGLEVANFPAEFNSSAVFRCVKVS 240
            R     D  D                  +     + GLE ++ P E +S AVFRC++VS
Sbjct: 181 SRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVS 240

Query: 241 AIDDVEEQFAYQTSVNIGGHMFKGILYDQGPESTP---NLSTGGESSYCYG----GEDDN 267
           +IDD +E++AYQT+V+IGGH+FKGILYDQGP S     + S  GE+S+ +         +
Sbjct: 241 SIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPS 300

[Close]

BLAST of CmoCh19G003110 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-40
Identity = 108/286 (37.76%), Postives = 147/286 (51.40%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQR----------GREQQLFLSKGLEIW---PQQNLEN 60
           M G+F L        +++EENQ+Q+               +  S   ++W   P+Q L +
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  YISFGVGPTRRNFMINASDRPDQFVPRLGFSINCQDCGNQAKKDCSHLRCRTCCKSRGFH 120
           + S     +   +  +  D  D        +I+C+DCGNQAKKDC+H+RCRTCCKSRGF 
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CQTHVKSTWVPATKRRERQLQRH--------------------QIVRQQSQLDQPDQTA- 180
           C THV+STW+P  +RRERQ Q H                     I ++      P  ++ 
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 ---PVDTPGLEV--ANFPAEFNSSAVFRCVKVSAIDD-VEEQFAYQTSVNIGGHMFKGIL 240
              P  + GLE+  A+FP E +S A+FRCVK+S +DD  + Q+AYQT+VNIGGH+FKGIL
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGIL 240

[Close]

BLAST of CmoCh19G003110 vs. TrEMBL
Match: A0A0A0K1X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051450 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 6.3e-99
Identity = 210/319 (65.83%), Postives = 232/319 (72.73%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQEQR---GREQQLFL-------------SKGLEIWPQQNLENYISF 60
           M GL YL  KQEE++E+    GREQQLFL             SKGLEIWPQQN+ENYISF
Sbjct: 1   MRGLLYLGGKQEEDEEESLRSGREQQLFLYSTNNNNNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GV-GPTRRNFMINASDRPDQFVPRLGFSI-----------NCQDCGNQAKKDCSHLRCRT 120
           GV GPTR+N +INASD   +FV RLGFS+           NCQDCGNQAKKDCSHLRCRT
Sbjct: 61  GVVGPTRKNLIINASDH--EFVSRLGFSMMRGGSGGGGGMNCQDCGNQAKKDCSHLRCRT 120

Query: 121 CCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIV----RQQSQLDQPDQT---------- 180
           CCKSRGF CQTHVKSTWVPA KRRERQ QRHQI     RQQSQ +Q DQT          
Sbjct: 121 CCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRLGENQP 180

Query: 181 ---APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGILYD 240
               P  T GL+VA+FPAEFNS A FRCVKVSAID+VEEQ AYQTSVN+GGHMFKGILYD
Sbjct: 181 LLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYD 240

Query: 241 QGPESTPNLS--TGGESSYCYGGEDDNQALELVIGASNGGWR---SNKPTPFMESSLYPI 268
            GPES+ N+S   GGESSYC+ GEDD+Q L+LVIGASNG  R   S+   PF+ESSLYPI
Sbjct: 241 HGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300

[Close]

BLAST of CmoCh19G003110 vs. TrEMBL
Match: A0A0A0LDI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865400 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.0e-88
Identity = 193/310 (62.26%), Postives = 213/310 (68.71%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQE-QRGR-EQQLFL------------SKGLEIWPQ----------- 60
           MT LFYL  KQE++ E QR R EQQLFL            SK  +IWPQ           
Sbjct: 1   MTELFYLDRKQEDDPENQRARSEQQLFLYNSRSNNPQQICSKEFQIWPQYYSHHNQHPPH 60

Query: 61  QNLENYISFGVGPTRRN-FMINASDRPDQFVPRLGFSI------------NCQDCGNQAK 120
           QN+ENYISFGVGP+RR+  MINA D    FV R GF++            NCQDCGNQAK
Sbjct: 61  QNVENYISFGVGPSRRSSLMINAFDH--DFVSRSGFTMTKHSGGGRGGGMNCQDCGNQAK 120

Query: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQS----QLDQPDQT 180
           KDCSHLRCRTCCKSRGFHCQTHVKSTWVPA KRRERQ QRHQ    Q+      + P   
Sbjct: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRHQQSSDQTVPKIHRENPPSL 180

Query: 181 APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGILYDQGP 240
               T GLE  NF  EFNSSAVFRCVKVSAID+VEEQ AYQT+VNIGGHMFKGILYDQGP
Sbjct: 181 TVTTTSGLEHGNFQGEFNSSAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGP 240

Query: 241 ESTPNLSTGGESSYCYGGEDDNQALELVIGASNGGWR-SNKPTPFMESSLYPIPINTFNT 268
           E + NLSTGG+      GED  + L+LVIGASNG  R +N+ TPF+ESSLYPIPIN+FN 
Sbjct: 241 EYSQNLSTGGD------GEDGGEGLDLVIGASNGSGRVNNQSTPFVESSLYPIPINSFNN 300

[Close]

BLAST of CmoCh19G003110 vs. TrEMBL
Match: A0A0A0LNQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G364580 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.3e-67
Identity = 163/351 (46.44%), Postives = 196/351 (55.84%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQRGREQQLFL--------SKGLEIWPQQ--------- 60
           M G FYL         KQEE++E+R  EQ LFL        +KG EIWPQQ         
Sbjct: 1   MAGFFYLGGGREGPPNKQEEDEEER--EQNLFLYRNDQEIYNKGFEIWPQQYNNNNNHQH 60

Query: 61  -----NLENYISFGVGPTRRNFMIN-ASDRPDQFVPRL-----------------GFSIN 120
                +L N++SFGVGP+RR+FMIN  SD P +    L                    +N
Sbjct: 61  QQPNPSLPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAAFAAAAASAATAGGMN 120

Query: 121 CQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSQLD 180
           CQDCGNQAKKDC++LRCRTCCKSRGF CQTHVKSTWVPA KRRERQ Q   +  QQ Q  
Sbjct: 121 CQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQHQQQQEQ 180

Query: 181 ----------QPDQTA-----------------PVDTPGLEVANFPAEFNSSAVFRCVKV 240
                     +  QTA                 P  T GLE+A FP+E NS AVFRCVKV
Sbjct: 181 FRGGDNSKRLRETQTATAIAAAPTASASACPRLPSITSGLELAQFPSEVNSPAVFRCVKV 240

Query: 241 SAIDDVEEQFAYQTSVNIGGHMFKGILYDQGPESTPNLSTGGESSYCYGGEDDNQALELV 268
           SA+DD +E+FAYQT+VNIGGH+FKGILYDQGPE     +  GESS  +GG+     L L+
Sbjct: 241 SAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEL--RYTAAGESSSGHGGDGSTHPLNLI 300

[Close]

BLAST of CmoCh19G003110 vs. TrEMBL
Match: E6NU70_JATCU (JHL18I08.14 protein OS=Jatropha curcas GN=JHL18I08.14 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.7e-64
Identity = 161/327 (49.24%), Postives = 191/327 (58.41%), Query Frame = 1


Query: 1   MTGLFYLSEKQ----EENQEQRGREQQLFL---------SKGLEIWPQ-----QNLENYI 60
           M G FYLS ++     +  E + +E  LFL         +KG EIWPQ     QN+ NY 
Sbjct: 1   MAGWFYLSGREGAVTSKQGEDKNQENNLFLYRSNNEQIYNKGFEIWPQYYHQQQNMNNYS 60

Query: 61  SFGVGPTRRNFMINASDRPDQFVPRLGF------SINCQDCGNQAKKDCSHLRCRTCCKS 120
           SFGVGP+RR+F  + S R    V R G        +NCQDCGNQAKKDC+HLRCRTCCKS
Sbjct: 61  SFGVGPSRRSFS-DESSRSGFTVMRQGGLGGGGGGMNCQDCGNQAKKDCAHLRCRTCCKS 120

Query: 121 RGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSQLDQPDQT------------------ 180
           RGF CQTHVKSTWVPA KRRERQ Q   + +QQ   +Q  Q                   
Sbjct: 121 RGFQCQTHVKSTWVPAAKRRERQQQLSALQQQQQHQEQQHQQQQQQFRGENPKRQRENQG 180

Query: 181 -AP--------VDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMF 240
            AP          T GLEVA+FP E NS AVFRCVKVSA+DD +EQFAYQT+VNIGGHMF
Sbjct: 181 GAPSLACTRLGTTTSGLEVAHFPPEVNSPAVFRCVKVSAMDDADEQFAYQTAVNIGGHMF 240

Query: 241 KGILYDQGPESTPNLSTGGESSYCYGGEDDNQALELVIGASNGGWRSNKPTPFME----- 268
           +G+LYDQGP+S    ++GGESS   GG    Q L L+  A+     S + TP  +     
Sbjct: 241 RGLLYDQGPDS--RYTSGGESS--SGGA---QQLNLITAATT----STEATPSNQQGTGA 300

[Close]

BLAST of CmoCh19G003110 vs. TrEMBL
Match: V4TF82_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001824mg PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63
Identity = 153/336 (45.54%), Postives = 195/336 (58.04%), Query Frame = 1


Query: 1   MTGLFYLSEKQE---ENQEQRGREQQLFL------------SKGLEIWPQ------QNLE 60
           M G FYL  ++E   + +E+  +E+ L+L            +KG E+WPQ      +N+ 
Sbjct: 1   MAGWFYLGGREEARSKQEEEEEKEENLYLYRSSANEEIYNSTKGFELWPQYYHQQQENMS 60

Query: 61  NYISFGVGPTRRNF--MINASDRPDQ------FVPRLGFS---------INCQDCGNQAK 120
           NY+SFGVGP+RR+    INA+   D+      FV R G           +NCQDCGNQAK
Sbjct: 61  NYLSFGVGPSRRSSSNFINAAAASDESSRSGGFVMRQGVGGGGGGGGGGMNCQDCGNQAK 120

Query: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQ-----LQRHQIVRQQSQLDQPDQ 180
           KDC H+RCRTCCKSRGF CQTHVKSTWVPA KRRERQ     LQRHQ  ++Q QL+Q D 
Sbjct: 121 KDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQRHQQQQEQQQLNQQDS 180

Query: 181 -----------------TAPVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQT 240
                                +  GLEV+ FP+E +SSAVFRCV+VSAIDD +E+FAYQT
Sbjct: 181 QHHHHHHQQQQFRGENPKRQRENQGLEVSQFPSELSSSAVFRCVRVSAIDDPDEEFAYQT 240

Query: 241 SVNIGGHMFKGILYDQGPESTPNLSTGGESSYCYGGEDDNQALELVIGASN--------- 268
           +V+IGGH+FKGILYDQGPE+    +   ESS+       +Q L L+  A+          
Sbjct: 241 AVHIGGHVFKGILYDQGPEN--RYTAAAESSH-------SQQLNLITAATATTTTTTGTV 300

[Close]

BLAST of CmoCh19G003110 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-52
Identity = 132/287 (45.99%), Postives = 164/287 (57.14%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPTRRN-FMIN-------ASDRPDQFVPRLGFS------INCQDC 94
           QQ L+ Y S    GVGP+  N F I+       A       + R G S      ++CQDC
Sbjct: 88  QQRLDLYSSAAGLGVGPSNHNQFDISGETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDC 147

Query: 95  GNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSQLDQPDQ 154
           GNQAKKDCSH+RCRTCCKSRGF C THV+STWVPA KRRERQ Q+   V+ Q+QL + + 
Sbjct: 148 GNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQ-QQLATVQPQTQLPRGES 207

Query: 155 ------------------TAPVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQ 214
                             T      GLEV NFPAE +SSAVFRCV+VS+++D EE+FAYQ
Sbjct: 208 VPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQ 267

Query: 215 TSVNIGGHMFKGILYDQGPESTP----NLSTGGESSYCYGGEDDNQALELVIGASNGGWR 268
           T+V+IGGH+FKGILYD GP S+     N+   GESS   GG    Q L L+   S     
Sbjct: 268 TAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGGA---QQLNLITAGSVTVAT 327

[Close]

BLAST of CmoCh19G003110 vs. TAIR10
Match: AT5G66350.1 (AT5G66350.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 191.8 bits (486), Expect = 5.4e-49
Identity = 113/255 (44.31%), Postives = 146/255 (57.25%), Query Frame = 1


Query: 35  QQNLENYIS---FGVGPTRRNFMINASDRPDQFVPRLGFS-INCQDCGNQAKKDCSHLRC 94
           QQ L+ Y S    GVGP+ R+ +  +           G    +CQDCGNQ+KKDCSH+RC
Sbjct: 77  QQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRC 136

Query: 95  RTCCKSRGFHCQTHVKSTWVPATKRRERQLQRH----------QIVRQQSQLDQPDQTAP 154
           RTCCKSRG  C THVKSTWVPA KRRERQ Q             + ++Q +      T+ 
Sbjct: 137 RTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSM 196

Query: 155 V-------DTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGIL 214
                   +T GLEV NFP E +SSAVFRCV+VS++DD EE++AY+T+V+IGGH+FKG+L
Sbjct: 197 AYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVL 256

Query: 215 YDQGPESTPNLSTGGESSYCYGGEDDNQALELVIGASNGGWRSNKPTPFMESSL-YPIPI 268
           YDQGP    +   G +            +    +  +NG   S        +SL YP PI
Sbjct: 257 YDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPI 316

[Close]

BLAST of CmoCh19G003110 vs. TAIR10
Match: AT1G75520.1 (AT1G75520.1 SHI-related sequence 5)

HSP 1 Score: 185.3 bits (469), Expect = 5.0e-47
Identity = 134/352 (38.07%), Postives = 172/352 (48.86%), Query Frame = 1


Query: 1   MTGLFYL--------SEKQEENQEQRGREQQ-----LFL--------SKGLEIWPQQNLE 60
           M G FYL        + KQ+ +Q  +    Q     L+L        +KG EIWP Q  +
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  ------------------NYISFGVGPTRRN------------FMINASDRPDQFVPRLG 120
                             N+ SFG+ P+  +            F + +   P  F     
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 FSINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRER-----QLQRHQ 180
             +NCQDCGNQAKKDC H+RCRTCCKSRGFHCQTHVKSTWVPA KRRER      LQ H 
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 181 I----------VRQQSQLDQPDQ--------TAPVDT--------PGLEVA-NFPAEFNS 240
                      +R+ S  D  D         +A  +T         GLEV+ + P E NS
Sbjct: 181 ASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNS 240

Query: 241 SAVFRCVKVSAI--DDVEEQFAYQTSVNIGGHMFKGILYDQGPESTPNLSTGGESSYCYG 268
            A+FRCV+VS+I  D+ ++ +AYQT+VNIGGH+FKGILYDQGPE   N      +S    
Sbjct: 241 PAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATT 300

[Close]

BLAST of CmoCh19G003110 vs. TAIR10
Match: AT1G19790.1 (AT1G19790.1 SHI-related sequence 7)

HSP 1 Score: 175.6 bits (444), Expect = 4.0e-44
Identity = 135/350 (38.57%), Postives = 169/350 (48.29%), Query Frame = 1


Query: 1   MTGLFYLS----EKQEENQEQRGREQQ----LFL--------SKGLEIWPQQNLE----- 60
           M GLFYL      KQ+ +QE+   E +    L+L        +KG EI+P Q  +     
Sbjct: 1   MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQQ 60

Query: 61  -------NYISFGVGPTRRNFMINASDRPDQF------------------VPRLGFSINC 120
                  N  SFG+ P+  N   N S     +                  V R G ++NC
Sbjct: 61  NHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQG-NMNC 120

Query: 121 QDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQ---------RHQI 180
           QDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV A KRRERQ Q         R   
Sbjct: 121 QDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDAN 180

Query: 181 VRQQSQLDQPD------------------QTAPVDTPGLEVANFPAEFNSSAVFRCVKVS 240
            R     D  D                  +     + GLE ++ P E +S AVFRC++VS
Sbjct: 181 SRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVS 240

Query: 241 AIDDVEEQFAYQTSVNIGGHMFKGILYDQGPESTP---NLSTGGESSYCYG----GEDDN 267
           +IDD +E++AYQT+V+IGGH+FKGILYDQGP S     + S  GE+S+ +         +
Sbjct: 241 SIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPS 300

[Close]

BLAST of CmoCh19G003110 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 167.9 bits (424), Expect = 8.3e-42
Identity = 108/286 (37.76%), Postives = 147/286 (51.40%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQR----------GREQQLFLSKGLEIW---PQQNLEN 60
           M G+F L        +++EENQ+Q+               +  S   ++W   P+Q L +
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  YISFGVGPTRRNFMINASDRPDQFVPRLGFSINCQDCGNQAKKDCSHLRCRTCCKSRGFH 120
           + S     +   +  +  D  D        +I+C+DCGNQAKKDC+H+RCRTCCKSRGF 
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CQTHVKSTWVPATKRRERQLQRH--------------------QIVRQQSQLDQPDQTA- 180
           C THV+STW+P  +RRERQ Q H                     I ++      P  ++ 
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 ---PVDTPGLEV--ANFPAEFNSSAVFRCVKVSAIDD-VEEQFAYQTSVNIGGHMFKGIL 240
              P  + GLE+  A+FP E +S A+FRCVK+S +DD  + Q+AYQT+VNIGGH+FKGIL
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGIL 240

[Close]

BLAST of CmoCh19G003110 vs. NCBI nr
Match: gi|449438526|ref|XP_004137039.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 9.1e-99
Identity = 210/319 (65.83%), Postives = 232/319 (72.73%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQEQR---GREQQLFL-------------SKGLEIWPQQNLENYISF 60
           M GL YL  KQEE++E+    GREQQLFL             SKGLEIWPQQN+ENYISF
Sbjct: 1   MRGLLYLGGKQEEDEEESLRSGREQQLFLYSTNNNNNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GV-GPTRRNFMINASDRPDQFVPRLGFSI-----------NCQDCGNQAKKDCSHLRCRT 120
           GV GPTR+N +INASD   +FV RLGFS+           NCQDCGNQAKKDCSHLRCRT
Sbjct: 61  GVVGPTRKNLIINASDH--EFVSRLGFSMMRGGSGGGGGMNCQDCGNQAKKDCSHLRCRT 120

Query: 121 CCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIV----RQQSQLDQPDQT---------- 180
           CCKSRGF CQTHVKSTWVPA KRRERQ QRHQI     RQQSQ +Q DQT          
Sbjct: 121 CCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRLGENQP 180

Query: 181 ---APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGILYD 240
               P  T GL+VA+FPAEFNS A FRCVKVSAID+VEEQ AYQTSVN+GGHMFKGILYD
Sbjct: 181 LLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYD 240

Query: 241 QGPESTPNLS--TGGESSYCYGGEDDNQALELVIGASNGGWR---SNKPTPFMESSLYPI 268
            GPES+ N+S   GGESSYC+ GEDD+Q L+LVIGASNG  R   S+   PF+ESSLYPI
Sbjct: 241 HGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300

[Close]

BLAST of CmoCh19G003110 vs. NCBI nr
Match: gi|659110505|ref|XP_008455259.1| (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 1.0e-97
Identity = 210/321 (65.42%), Postives = 230/321 (71.65%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQEQ---RGREQQLFL-------------SKGLEIWPQQNLENYISF 60
           M GL YL  KQEE++E+    GREQQLFL             SKGLEIWPQQN+ENYISF
Sbjct: 1   MRGLLYLGGKQEEDEEEILRSGREQQLFLYSSTNNHNNEEIYSKGLEIWPQQNVENYISF 60

Query: 61  GV-GPTRRNFMINASDRPDQFVPRLGFSI------------NCQDCGNQAKKDCSHLRCR 120
           GV GPTR+N +INASD   + V RLGFS+            NCQDCGNQAKKDCSHLRCR
Sbjct: 61  GVVGPTRKNLIINASDH--ELVSRLGFSMMRGGGGGGGGGMNCQDCGNQAKKDCSHLRCR 120

Query: 121 TCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIV----RQQSQLDQPDQT--------- 180
           TCCKSRGF CQTHVKSTWVPA KRRERQ QRHQI     RQQSQ +Q DQT         
Sbjct: 121 TCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRYGENQ 180

Query: 181 ----APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGILY 240
                P  T GLEVA+FPAEFNS A FRCVKVSAID+VEEQ AYQTSVNIGGHMFKGILY
Sbjct: 181 PLLATPTVTSGLEVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILY 240

Query: 241 DQGPESTPNLS--TGGE-SSYCYGGEDDNQALELVIGASNGGWR---SNKPTPFMESSLY 267
           D GPE++ N+S   GGE SSYC+GGEDD+Q L+LVIGASNG  R   S+   PF+ESSLY
Sbjct: 241 DHGPETSQNMSIDIGGESSSYCHGGEDDSQPLDLVIGASNGSGRVSQSSSSAPFVESSLY 300

[Close]

BLAST of CmoCh19G003110 vs. NCBI nr
Match: gi|778686710|ref|XP_004147842.2| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 1.5e-88
Identity = 193/310 (62.26%), Postives = 213/310 (68.71%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQE-QRGR-EQQLFL------------SKGLEIWPQ----------- 60
           MT LFYL  KQE++ E QR R EQQLFL            SK  +IWPQ           
Sbjct: 1   MTELFYLDRKQEDDPENQRARSEQQLFLYNSRSNNPQQICSKEFQIWPQYYSHHNQHPPH 60

Query: 61  QNLENYISFGVGPTRRN-FMINASDRPDQFVPRLGFSI------------NCQDCGNQAK 120
           QN+ENYISFGVGP+RR+  MINA D    FV R GF++            NCQDCGNQAK
Sbjct: 61  QNVENYISFGVGPSRRSSLMINAFDH--DFVSRSGFTMTKHSGGGRGGGMNCQDCGNQAK 120

Query: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQS----QLDQPDQT 180
           KDCSHLRCRTCCKSRGFHCQTHVKSTWVPA KRRERQ QRHQ    Q+      + P   
Sbjct: 121 KDCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRHQQSSDQTVPKIHRENPPSL 180

Query: 181 APVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGILYDQGP 240
               T GLE  NF  EFNSSAVFRCVKVSAID+VEEQ AYQT+VNIGGHMFKGILYDQGP
Sbjct: 181 TVTTTSGLEHGNFQGEFNSSAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGP 240

Query: 241 ESTPNLSTGGESSYCYGGEDDNQALELVIGASNGGWR-SNKPTPFMESSLYPIPINTFNT 268
           E + NLSTGG+      GED  + L+LVIGASNG  R +N+ TPF+ESSLYPIPIN+FN 
Sbjct: 241 EYSQNLSTGGD------GEDGGEGLDLVIGASNGSGRVNNQSTPFVESSLYPIPINSFNN 300

[Close]

BLAST of CmoCh19G003110 vs. NCBI nr
Match: gi|659133021|ref|XP_008466512.1| (PREDICTED: protein SHI RELATED SEQUENCE 3-like [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 4.7e-87
Identity = 194/315 (61.59%), Postives = 215/315 (68.25%), Query Frame = 1


Query: 1   MTGLFYLSEKQEENQE-QRGR-EQQLFL------------SKGLEIWPQ----------Q 60
           MT LFYL  KQE++ E QR R EQQLFL            SK  +IWPQ          Q
Sbjct: 1   MTELFYLDRKQEDDPENQRTRSEQQLFLYNGRSNNPQQIYSKEFQIWPQYYSHNHHLPNQ 60

Query: 61  NLENYISFGVGPTRRN-FMINASDRPDQFVPRLGFSI------------NCQDCGNQAKK 120
           N+ENYISFGVGP+RR+  MINA D    FV R GF++            NCQDCGNQAKK
Sbjct: 61  NVENYISFGVGPSRRSSLMINAFDH--DFVSRSGFTMTRHSGGGGGGGMNCQDCGNQAKK 120

Query: 121 DCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSQLDQ--------- 180
           DCSHLRCRTCCKSRGFHCQTHVKSTWVPA KRRERQ QRHQ +R     DQ         
Sbjct: 121 DCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRHQQLRADQSSDQTVPKIHRAN 180

Query: 181 PDQTAPVDTPGLEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGILY 240
                P  T GLE+ NF  EFNSSAVFRCVKVSAID+VEEQ AYQT+VNIGGHMFKGILY
Sbjct: 181 QPSLTPTITSGLELGNFQGEFNSSAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILY 240

Query: 241 DQGPESTP-NLSTGGESSYCYGGEDDNQALELVIGASN-GGWRSNKPTPFMESSLYPIPI 268
           DQGPE+   NLS+GG+      GE+D Q L+LVIGASN  G  +N+ TPF+ESSLYPIPI
Sbjct: 241 DQGPENNQINLSSGGD------GENDGQGLDLVIGASNCSGRVNNQSTPFVESSLYPIPI 300

[Close]

BLAST of CmoCh19G003110 vs. NCBI nr
Match: gi|449470120|ref|XP_004152766.1| (PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 163/351 (46.44%), Postives = 196/351 (55.84%), Query Frame = 1


Query: 1   MTGLFYLS-------EKQEENQEQRGREQQLFL--------SKGLEIWPQQ--------- 60
           M G FYL         KQEE++E+R  EQ LFL        +KG EIWPQQ         
Sbjct: 1   MAGFFYLGGGREGPPNKQEEDEEER--EQNLFLYRNDQEIYNKGFEIWPQQYNNNNNHQH 60

Query: 61  -----NLENYISFGVGPTRRNFMIN-ASDRPDQFVPRL-----------------GFSIN 120
                +L N++SFGVGP+RR+FMIN  SD P +    L                    +N
Sbjct: 61  QQPNPSLPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAAFAAAAASAATAGGMN 120

Query: 121 CQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSQLD 180
           CQDCGNQAKKDC++LRCRTCCKSRGF CQTHVKSTWVPA KRRERQ Q   +  QQ Q  
Sbjct: 121 CQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQHQQQQEQ 180

Query: 181 ----------QPDQTA-----------------PVDTPGLEVANFPAEFNSSAVFRCVKV 240
                     +  QTA                 P  T GLE+A FP+E NS AVFRCVKV
Sbjct: 181 FRGGDNSKRLRETQTATAIAAAPTASASACPRLPSITSGLELAQFPSEVNSPAVFRCVKV 240

Query: 241 SAIDDVEEQFAYQTSVNIGGHMFKGILYDQGPESTPNLSTGGESSYCYGGEDDNQALELV 268
           SA+DD +E+FAYQT+VNIGGH+FKGILYDQGPE     +  GESS  +GG+     L L+
Sbjct: 241 SAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEL--RYTAAGESSSGHGGDGSTHPLNLI 300

The following BLAST results are available for this feature:

BLAST of CmoCh19G003110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SRS1_ARATH	4.1e-51	45.99	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2	[more]
SHI_ARATH	9.5e-48	44.31	Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1	[more]
SRS5_ARATH	8.9e-46	38.07	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1	[more]
SRS7_ARATH	7.1e-43	38.57	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1	[more]
SRS2_ARATH	1.5e-40	37.76	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1	[more]

BLAST of CmoCh19G003110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1X2_CUCSA	6.3e-99	65.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051450 PE=4 SV=1	[more]
A0A0A0LDI9_CUCSA	1.0e-88	62.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865400 PE=4 SV=1	[more]
A0A0A0LNQ5_CUCSA	8.3e-67	46.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G364580 PE=4 SV=1	[more]
E6NU70_JATCU	1.7e-64	49.24	JHL18I08.14 protein OS=Jatropha curcas GN=JHL18I08.14 PE=4 SV=1	[more]
V4TF82_9ROSI	1.1e-63	45.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001824mg PE=4 SV=1	[more]

BLAST of CmoCh19G003110 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51060.1	2.3e-52	45.99	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	5.4e-49	44.31	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	5.0e-47	38.07	SHI-related sequence 5	[more]
AT1G19790.1	4.0e-44	38.57	SHI-related sequence 7	[more]
AT4G36260.1	8.3e-42	37.76	Lateral root primordium (LRP) protein-related	[more]

BLAST of CmoCh19G003110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438526\|ref\|XP_004137039.1\|	9.1e-99	65.83	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus]	[more]
gi\|659110505\|ref\|XP_008455259.1\|	1.0e-97	65.42	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo]	[more]
gi\|778686710\|ref\|XP_004147842.2\|	1.5e-88	62.26	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus]	[more]
gi\|659133021\|ref\|XP_008466512.1\|	4.7e-87	61.59	PREDICTED: protein SHI RELATED SEQUENCE 3-like [Cucumis melo]	[more]
gi\|449470120\|ref\|XP_004152766.1\|	1.2e-66	46.44	PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006510	Znf_LRP1
IPR006511	SHI_C
IPR007818	SHI

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003110.1	CmoCh19G003110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAMs	TIGR01623	TIGR01623	coord: 73..115 score: 7.9
IPR006511	Lateral Root Primordium type 1, C-terminal	TIGRFAMs	TIGR01624	TIGR01624	coord: 151..198 score: 6.4
IPR007818	Protein of unknown function DUF702	PFAM	PF05142	DUF702	coord: 71..199 score: 1.1
None	No IPR available	PANTHER	PTHR31604	FAMILY NOT NAMED	coord: 28..267 score: 1.0E
None	No IPR available	PANTHER	PTHR31604:SF6	SUBFAMILY NOT NAMED	coord: 28..267 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G003110	Cucsa.345910	Cucumber (Gy14) v1	cgycmoB0948
CmoCh19G003110	CmaCh19G002830	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G003110	Cla009422	Watermelon (97103) v1	cmowmB475
CmoCh19G003110	Csa7G051450	Cucumber (Chinese Long) v2	cmocuB523
CmoCh19G003110	MELO3C018686	Melon (DHL92) v3.5.1	cmomeB446
CmoCh19G003110	ClCG09G013590	Watermelon (Charleston Gray)	cmowcgB442
CmoCh19G003110	CSPI07G05110	Wild cucumber (PI 183967)	cmocpiB529
CmoCh19G003110	Lsi03G008150	Bottle gourd (USVL1VR-Ls)	cmolsiB466
CmoCh19G003110	Cp4.1LG15g02550	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G003110	MELO3C018686.2	Melon (DHL92) v3.6.1	cmomedB515
CmoCh19G003110	CsaV3_7G006060	Cucumber (Chinese Long) v3	cmocucB0627
CmoCh19G003110	Cla97C09G176200	Watermelon (97103) v2	cmowmbB532
CmoCh19G003110	CsGy7G004670	Cucumber (Gy14) v2	cgybcmoB931
CmoCh19G003110	Carg24585	Silver-seed gourd	carcmoB0890

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G003110	Wax gourd	cmowgoB0656
CmoCh19G003110	Cucurbita moschata (Rifu)	cmocmoB109
CmoCh19G003110	Cucumber (Gy14) v1	cgycmoB0528
CmoCh19G003110	Cucurbita maxima (Rimu)	cmacmoB147
CmoCh19G003110	Wild cucumber (PI 183967)	cmocpiB522
CmoCh19G003110	Cucumber (Chinese Long) v2	cmocuB515
CmoCh19G003110	Cucurbita pepo (Zucchini)	cmocpeB493
CmoCh19G003110	Cucumber (Gy14) v2	cgybcmoB764
CmoCh19G003110	Silver-seed gourd	carcmoB1001
CmoCh19G003110	Cucumber (Chinese Long) v3	cmocucB0619