Cp4.1LG15g02080 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g02080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING-H2 finger protein ATL3A
LocationCp4.1LG15 : 1711316 .. 1712383 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGAAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCGATTACGATTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCCGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAGACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGAAGTTTCAGAAGTAATTGTGGGAAGAACTCAGTTCGTGCCTTCAGTGACCTCGGAGTACTGGAGAAAAGAGACACTGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCGGATGTTCTACGTCTAAACGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACACAGGGAAATCGCCCGTGTCTGA

mRNA sequence

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGAAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCGATTACGATTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCCGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAGACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGAAGTTTCAGAAGTAATTGTGGGAAGAACTCAGTTCGTGCCTTCAGTGACCTCGGAGTACTGGAGAAAAGAGACACTGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCGGATGTTCTACGTCTAAACGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACACAGGGAAATCGCCCGTGTCTGA

Coding sequence (CDS)

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGAAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCGATTACGATTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCCGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAGACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGAAGTTTCAGAAGTAATTGTGGGAAGAACTCAGTTCGTGCCTTCAGTGACCTCGGAGTACTGGAGAAAAGAGACACTGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCGGATGTTCTACGTCTAAACGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACACAGGGAAATCGCCCGTGTCTGA

Protein sequence

MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHREIARV
Homology
[Close]
BLAST of Cp4.1LG15g02080 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.3e-65
Identity = 162/373 (43.43%), Postives = 221/373 (59.25%), Query Frame = 1 

Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDD---SSPNFSPLVIAIIG 65
           +P  W PY S  DCSQG C++YCPQWCY++  PPPP  F DDD   SS +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPT--LHEPWHVATN--GL 125
           IL SA +L+SYYT+ISKYC   ++         +E    NHN          ++TN  GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQT------SSSETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 126 DEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSH 185
           +E+M+KSIT+ KYK GDG V+GSDCSVCLSEF+E++SLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 186 SNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSER--SFRSNC 245
           SNCPLCRA +  V+ +P   +  + +  + N    +++  H   +VS+ +     + S  
Sbjct: 184 SNCPLCRAFVTGVN-NPTASVGQNVSVVVAN----QSNSAHQTGSVSEINLNLAGYESQT 243

Query: 246 GK-NSVRAFSDLGV----------LEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIAD 305
           G  +SV    DL +          L+  +   E +D +   IRRS+S++  S   + IAD
Sbjct: 244 GDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLN--SGVVVSIAD 303

Query: 306 VLRLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVS------IKRSFSSGR 351
           VLR  +D  E G SG VG+S+    E+ +    KTI     +  S        RS S+GR
Sbjct: 304 VLREIED--EEGESGGVGTSQRR--EEGEDGDGKTIPPTEANQRSGGVSGFFVRSLSTGR 359

[Close]
BLAST of Cp4.1LG15g02080 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-64
Identity = 156/365 (42.74%), Postives = 201/365 (55.07%), Query Frame = 1 

Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFP----DDDSSPNFSPLVIAII 65
           S   W+PY   +DCSQG CS+YCPQWCY +  PPPP +      DD S P FSPLVIAII
Sbjct: 4   SAPAWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAII 63

Query: 66  GILASAFLLLSYYTIISKYCGNTN----RLFGT-------GNHDPNEEFEDNHNPTLHEP 125
           G+LASAFLL+SYYT ISKYCG  +    R+FG+       G    +     +     HE 
Sbjct: 64  GVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHES 123

Query: 126 WHVAT-NGLDEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQ 185
           W+V+  +GLDE ++  IT+CKY+RGDG V  +DCSVCL EF + +SLRLLP+CSHAFH Q
Sbjct: 124 WNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQ 183

Query: 186 CIDTWLKSHSNCPLCRANIVSVD---ASPPVH--LPASNAYPITNETMPETSQTHDPEAV 245
           CIDTWLKSHSNCPLCRANI  V    ASP      P       T+E +       +    
Sbjct: 184 CIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHEVVVVMDGLEN--LC 243

Query: 246 SQDSERSFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIA 305
            +  E   R++   +   A      +E+ +   E+R+      R + S D    N + IA
Sbjct: 244 EEQQEAVSRASTADDDHDAKDVAEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIA 303

Query: 306 DVLRLN-DDEYEAGS-----SGDVGSSKCSVGEDSKS----SHRKTILHCVMSPVSIKRS 340
           DVL+ + +DE  A       +G  G+S+   GE+SK     S R   L   M  +  KR 
Sbjct: 304 DVLQESMEDELTAARESGLLAGGAGTSRRCHGENSKGRGGRSRRALQLQDAMEALPGKRL 363

[Close]
BLAST of Cp4.1LG15g02080 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-61
Identity = 157/336 (46.73%), Postives = 197/336 (58.63%), Query Frame = 1 

Query: 1   MGSYGSPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMLSPPPP--LEFPDDDSSPNFSPLV 60
           MGS G+P  W   Y S +DCSQG CSVYCPQWCY++  PPP   L+  DD SS +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLLSYYTIISKYCGNT------------NRLFGT----GNHDPNEEFED 120
           IA+IGILASAF+L+SYYT+ISKYC               NR+       G ++ N     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 NHNPTLHEPWHVATNGLDEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPK 180
           N N T+        +GLDE+++KSIT+ KY++ DG VE SDCSVCLSEFQE++SLRLLPK
Sbjct: 121 NPNQTIGGG---GGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 180

Query: 181 CSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDP 240
           C+HAFH+ CIDTWLKSHSNCPLCRA IV+  A   V L  +N   +T      T      
Sbjct: 181 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--TNQQIVTENNSISTGD-DSV 240

Query: 241 EAVSQDSERSFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHI 300
             V+ D E S   N   N        G   K   + + RDGE    RRS S+ +     +
Sbjct: 241 VVVNLDLENSRSRNETVNE-------GSTPKPPEMQDSRDGE---ERRSASL-NSGGGVV 300

Query: 301 IIADVLR-LNDDEYEAGSSGDVGSSK-CSVGEDSKS 316
            IAD+LR + DDE  AG    VG+S+    GE  K+
Sbjct: 301 SIADILREIEDDEESAG----VGTSRWVEEGEGEKT 315

[Close]
BLAST of Cp4.1LG15g02080 vs. Swiss-Prot
Match: ATL53_ARATH (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 7.4e-48
Identity = 100/210 (47.62%), Postives = 132/210 (62.86%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMLSPPPPL--EFPDDD--SSPNFSP 60
           M S  +P  W  Y++ +DC+QG CS +CPQWC YI  SPPP    +F +D   S+PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTL---HEPWH 120
           LVIAI GI A+AFLL +YYT++SKYC N            ++   D ++P      +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATNGLDEAMVKSITICKYKRGDG--LVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHL 180
           +  +T GLD+ ++K I   K K+      + G+DCS+CL EF ED+SLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVDASPPVH 199
            CID WLKSHSNCPLCRA I+      P H
Sbjct: 181 VCIDRWLKSHSNCPLCRAKIIVPTTQQPEH 210

[Close]
BLAST of Cp4.1LG15g02080 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-36
Identity = 95/266 (35.71%), Postives = 131/266 (49.25%), Query Frame = 1 

Query: 18  DCSQGFCSVYCPQWCY-----IMLSPPPP------------------LEFPDDDSSPNFS 77
           DCS G C   CP  CY       +SP  P                  +  P  DSS +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PLVIAIIGILASAFLLLSYYTIISKYCGNTNRL----FGTGNHDPN----EEFEDNHNPT 137
            + I  I     A LL  ++ +   +  + NR+    + + N D +    EEF+D     
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 138 LHEPWHVATNGLDEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAF 197
            H  W + T GL ++++ SITIC YKRGDGL+E +DC VCL+EF+ED+SLRLLPKC+HAF
Sbjct: 142 -HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAF 201

Query: 198 HLQCIDTWLKSHSNCPLCRANIVSVDASPPVH------LPASNAYPITNETMPETSQTHD 247
           H+ CIDTWL SH+NCPLCRA I  +  + P +       P  +   + N+ + E      
Sbjct: 202 HISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEEDHGEI 261

[Close]
BLAST of Cp4.1LG15g02080 vs. TrEMBL
Match: A0A0A0LH71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901190 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.1e-174
Identity = 302/358 (84.36%), Postives = 328/358 (91.62%), Query Frame = 1 

Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPD+ S P+FSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDN-SGPHFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASAFLL++YYTIISKYCGNTNRL GTGNHDP+EE+EDNHNPT HEPWHVAT GLDEA
Sbjct: 64  GILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEA 123

Query: 122 MVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSIT+CKYKR DGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFRSNCGKNSV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PETSQ +D EAVS DS +SF +  GKNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSV 243

Query: 242 RAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEY----EAG 301
           RAFSDLG LEKRDT+IELRDG LQQIRRSISMDHCSQNHIIIADVLRLN+D++    EAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHREIARV 356
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+EHR IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 360

[Close]
BLAST of Cp4.1LG15g02080 vs. TrEMBL
Match: A0A061GAA2_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015695 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.4e-122
Identity = 223/363 (61.43%), Postives = 272/363 (74.93%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGS G+P+TW+PYM+ KDCSQGFCS+YCPQWCYI+  PPPP+EFPDDDS PNFSPLVIAI
Sbjct: 1   MGSIGNPRTWVPYMNTKDCSQGFCSLYCPQWCYIIFPPPPPIEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLL+SYYTIISKYCGN +      NHDP E  EDNH+P++HEPW  +T GLDE
Sbjct: 61  IGILASAFLLVSYYTIISKYCGNVDPSRRRENHDPGEVLEDNHSPSVHEPWQTSTTGLDE 120

Query: 121 AMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSIT+CKYK+GDGL+EG+DCSVCLSEFQED+SLRLLPKCSHAFH+ CIDTWL+SHSN
Sbjct: 121 ALIKSITVCKYKKGDGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHVHCIDTWLRSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQ-THDPEAVSQDSER--------- 240
           CPLCRANI+ + ASP    PA    P  NE++ +    T++  A +QDS R         
Sbjct: 181 CPLCRANIIFISASPLPLPPALTESPPGNESLQDRQPVTNEYAAAAQDSGRRSMQEVDRF 240

Query: 241 -SFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRL 300
            S  S   K   RAFSDLG  + RD+VIE+R+   QQ+RRS+SMDH  Q+ + +AD+L +
Sbjct: 241 QSDLSRLPKTPSRAFSDLGNAQGRDSVIEIREESYQQMRRSVSMDHPCQSQLSVADILHM 300

Query: 301 NDDEYEAG-----SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIR 348
           N +E         SSG  GSSK S  E SK S++  +LHCVM+PV++KRSFSSGRF L R
Sbjct: 301 NQEEDSRVEECHFSSGIAGSSKQSA-EGSKLSNKMRVLHCVMNPVAMKRSFSSGRFFLTR 360

[Close]
BLAST of Cp4.1LG15g02080 vs. TrEMBL
Match: U5GS45_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02360g PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.1e-118
Identity = 224/361 (62.05%), Postives = 272/361 (75.35%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PKT IPY++NKDCSQGFCS+YCPQWCYI+  PPPPLEF DD+SSP  SPLVIAI
Sbjct: 1   MASLGTPKTRIPYVNNKDCSQGFCSLYCPQWCYIIFPPPPPLEFLDDNSSPKISPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTG-NHDPNEEFEDNHNPTLHEPWHVATNGLD 120
           IGIL SAFLL+ YYTIISKYCGN +       NH  NEEFE +HNP+LHEPWH AT GLD
Sbjct: 61  IGILLSAFLLVIYYTIISKYCGNNDPARRRDQNHGQNEEFEGDHNPSLHEPWHAATTGLD 120

Query: 121 EAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHS 180
           EA+++SIT+CKYK+GDGL++G+DCSVCLSEFQED+S+RLLPKCSHAFH+ CIDTWL+SHS
Sbjct: 121 EALIRSITVCKYKKGDGLIDGTDCSVCLSEFQEDESIRLLPKCSHAFHVPCIDTWLRSHS 180

Query: 181 NCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFR------ 240
           NCPLCRANIV   ASPP   P     P  NE+   + +++D  A +Q +ER  R      
Sbjct: 181 NCPLCRANIVFFSASPPQLPPPVAETPRGNESWQNSQRSNDNVAATQGTERVARDEQVMQ 240

Query: 241 --SNCGKNSVRAFSDLGVLEKRDTVIELRDGE-LQQIRRSISMDHCSQNHIIIADVLRLN 300
             +   K   R FSDLG LE+RDT+IE+RD +  Q+IRRS+SMDH  Q+H  +AD+LR+N
Sbjct: 241 NPAGDPKTPWRVFSDLGNLEERDTIIEMRDIDGYQRIRRSVSMDHPCQSHASVADILRMN 300

Query: 301 DDEY--EAGSSGDVGSSKCSVGEDSK--SSHRKTILHCVMSPVSIKRSFSSGRFSLIRHG 348
            D        SGDVGSSK S  EDSK  SS+R+ +LHCV++PV++KRSFSSGRF    HG
Sbjct: 301 QDGVVRVEDCSGDVGSSKHS-AEDSKFTSSNRRRVLHCVLNPVTMKRSFSSGRFFPTGHG 360

[Close]
BLAST of Cp4.1LG15g02080 vs. TrEMBL
Match: A0A0B2PB01_GLYSO (E3 ubiquitin-protein ligase OS=Glycine soja GN=glysoja_024234 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 4.2e-114
Identity = 208/359 (57.94%), Postives = 266/359 (74.09%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PK+W+PYM+NKDCSQGFCS+YCPQWCY++  PPPP EFPDDDSSPNFSPLVIA+
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAV 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IG+L SAFLL+SYYTIISKYCG+      + NH+ N E E++HNP+LHEPWH  T GLDE
Sbjct: 61  IGVLVSAFLLVSYYTIISKYCGSRESS-QSENHEENVELEEDHNPSLHEPWHAPTIGLDE 120

Query: 121 AMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSIT+CKYK+GDGLVE +DCSVCLSEFQ+D+S+RLLPKCSHAFHL CIDTWLKSHS+
Sbjct: 121 ALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRLLPKCSHAFHLPCIDTWLKSHSS 180

Query: 181 CPLCRANIVSVDAS----------PPVHLPASNAYPITNETMPETSQTHDPEAVSQDSER 240
           CPLCRA+I + +A+          PP     S+     +E +   ++  + +AV  +   
Sbjct: 181 CPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAVEGEVTL 240

Query: 241 SFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQ--NHIIIADVLR 300
           +      K+++RA SDLG L  R +VIE+RD     IRR++SMDH  Q  + + IADVL 
Sbjct: 241 THGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLSIADVLH 300

Query: 301 LNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGK 348
           +N +    G S   G SK S GE SKSS+R+ +LHCV+SP+++KRSFSSGRFSL R+G+
Sbjct: 301 VNQE--HEGCSNGAGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLSRNGR 356

[Close]
BLAST of Cp4.1LG15g02080 vs. TrEMBL
Match: I1J4U6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G017300 PE=4 SV=2)

HSP 1 Score: 419.5 bits (1077), Expect = 4.2e-114
Identity = 208/359 (57.94%), Postives = 266/359 (74.09%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PK+W+PYM+NKDCSQGFCS+YCPQWCY++  PPPP EFPDDDSSPNFSPLVIA+
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAV 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IG+L SAFLL+SYYTIISKYCG+      + NH+ N E E++HNP+LHEPWH  T GLDE
Sbjct: 61  IGVLVSAFLLVSYYTIISKYCGSRESS-QSENHEENVELEEDHNPSLHEPWHAPTIGLDE 120

Query: 121 AMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSIT+CKYK+GDGLVE +DCSVCLSEFQ+D+S+RLLPKCSHAFHL CIDTWLKSHS+
Sbjct: 121 ALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRLLPKCSHAFHLPCIDTWLKSHSS 180

Query: 181 CPLCRANIVSVDAS----------PPVHLPASNAYPITNETMPETSQTHDPEAVSQDSER 240
           CPLCRA+I + +A+          PP     S+     +E +   ++  + +AV  +   
Sbjct: 181 CPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAVEGEVTL 240

Query: 241 SFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQ--NHIIIADVLR 300
           +      K+++RA SDLG L  R +VIE+RD     IRR++SMDH  Q  + + IADVL 
Sbjct: 241 THGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLSIADVLH 300

Query: 301 LNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGK 348
           +N +    G S   G SK S GE SKSS+R+ +LHCV+SP+++KRSFSSGRFSL R+G+
Sbjct: 301 VNQE--HEGCSNGAGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLSRNGR 356

[Close]
BLAST of Cp4.1LG15g02080 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-66
Identity = 162/373 (43.43%), Postives = 221/373 (59.25%), Query Frame = 1 

Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDD---SSPNFSPLVIAIIG 65
           +P  W PY S  DCSQG C++YCPQWCY++  PPPP  F DDD   SS +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPT--LHEPWHVATN--GL 125
           IL SA +L+SYYT+ISKYC   ++         +E    NHN          ++TN  GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQT------SSSETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 126 DEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSH 185
           +E+M+KSIT+ KYK GDG V+GSDCSVCLSEF+E++SLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 186 SNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSER--SFRSNC 245
           SNCPLCRA +  V+ +P   +  + +  + N    +++  H   +VS+ +     + S  
Sbjct: 184 SNCPLCRAFVTGVN-NPTASVGQNVSVVVAN----QSNSAHQTGSVSEINLNLAGYESQT 243

Query: 246 GK-NSVRAFSDLGV----------LEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIAD 305
           G  +SV    DL +          L+  +   E +D +   IRRS+S++  S   + IAD
Sbjct: 244 GDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLN--SGVVVSIAD 303

Query: 306 VLRLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVS------IKRSFSSGR 351
           VLR  +D  E G SG VG+S+    E+ +    KTI     +  S        RS S+GR
Sbjct: 304 VLREIED--EEGESGGVGTSQRR--EEGEDGDGKTIPPTEANQRSGGVSGFFVRSLSTGR 359

[Close]
BLAST of Cp4.1LG15g02080 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 237.3 bits (604), Expect = 1.5e-62
Identity = 157/336 (46.73%), Postives = 197/336 (58.63%), Query Frame = 1 

Query: 1   MGSYGSPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMLSPPPP--LEFPDDDSSPNFSPLV 60
           MGS G+P  W   Y S +DCSQG CSVYCPQWCY++  PPP   L+  DD SS +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLLSYYTIISKYCGNT------------NRLFGT----GNHDPNEEFED 120
           IA+IGILASAF+L+SYYT+ISKYC               NR+       G ++ N     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 NHNPTLHEPWHVATNGLDEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPK 180
           N N T+        +GLDE+++KSIT+ KY++ DG VE SDCSVCLSEFQE++SLRLLPK
Sbjct: 121 NPNQTIGGG---GGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 180

Query: 181 CSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDP 240
           C+HAFH+ CIDTWLKSHSNCPLCRA IV+  A   V L  +N   +T      T      
Sbjct: 181 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--TNQQIVTENNSISTGD-DSV 240

Query: 241 EAVSQDSERSFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHI 300
             V+ D E S   N   N        G   K   + + RDGE    RRS S+ +     +
Sbjct: 241 VVVNLDLENSRSRNETVNE-------GSTPKPPEMQDSRDGE---ERRSASL-NSGGGVV 300

Query: 301 IIADVLR-LNDDEYEAGSSGDVGSSK-CSVGEDSKS 316
            IAD+LR + DDE  AG    VG+S+    GE  K+
Sbjct: 301 SIADILREIEDDEESAG----VGTSRWVEEGEGEKT 315

[Close]
BLAST of Cp4.1LG15g02080 vs. TAIR10
Match: AT4G17905.1 (AT4G17905.1 RING/U-box superfamily protein)

HSP 1 Score: 192.6 bits (488), Expect = 4.2e-49
Identity = 100/210 (47.62%), Postives = 132/210 (62.86%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMLSPPPPL--EFPDDD--SSPNFSP 60
           M S  +P  W  Y++ +DC+QG CS +CPQWC YI  SPPP    +F +D   S+PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTL---HEPWH 120
           LVIAI GI A+AFLL +YYT++SKYC N            ++   D ++P      +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATNGLDEAMVKSITICKYKRGDG--LVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHL 180
           +  +T GLD+ ++K I   K K+      + G+DCS+CL EF ED+SLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVDASPPVH 199
            CID WLKSHSNCPLCRA I+      P H
Sbjct: 181 VCIDRWLKSHSNCPLCRAKIIVPTTQQPEH 210

[Close]
BLAST of Cp4.1LG15g02080 vs. TAIR10
Match: AT1G72220.1 (AT1G72220.1 RING/U-box superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 7.4e-38
Identity = 95/266 (35.71%), Postives = 131/266 (49.25%), Query Frame = 1 

Query: 18  DCSQGFCSVYCPQWCY-----IMLSPPPP------------------LEFPDDDSSPNFS 77
           DCS G C   CP  CY       +SP  P                  +  P  DSS +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PLVIAIIGILASAFLLLSYYTIISKYCGNTNRL----FGTGNHDPN----EEFEDNHNPT 137
            + I  I     A LL  ++ +   +  + NR+    + + N D +    EEF+D     
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 138 LHEPWHVATNGLDEAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAF 197
            H  W + T GL ++++ SITIC YKRGDGL+E +DC VCL+EF+ED+SLRLLPKC+HAF
Sbjct: 142 -HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAF 201

Query: 198 HLQCIDTWLKSHSNCPLCRANIVSVDASPPVH------LPASNAYPITNETMPETSQTHD 247
           H+ CIDTWL SH+NCPLCRA I  +  + P +       P  +   + N+ + E      
Sbjct: 202 HISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEEDHGEI 261

[Close]
BLAST of Cp4.1LG15g02080 vs. TAIR10
Match: AT4G33565.1 (AT4G33565.1 RING/U-box superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 99/300 (33.00%), Postives = 156/300 (52.00%), Query Frame = 1 

Query: 22  GFCSVYC----PQWCYIMLSP--PPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYT 81
           G+CS YC    P  C I++     PP E   DD+      L+I+   I+ + FLL +   
Sbjct: 87  GYCSSYCLDECPSICEIVVISGLSPPAEIHHDDNLKRI--LIISASSIITTLFLL-TLLV 146

Query: 82  IISKYCGNTNRLFGTGNHDPNEEFE----DNHNPTL--HEPWHVATNGLDEAMVKSITIC 141
           +  K+     R   T      EE      D   P +  H  WH+ T GL+  ++ SI +C
Sbjct: 147 LCFKFYYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVC 206

Query: 142 KYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIV 201
           +Y + DG+VEG+DCSVCLSEF+E+++LRLLPKC HAFHL CIDTWL+SH+NCPLCRA IV
Sbjct: 207 QYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV 266

Query: 202 SVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFRSNCGKNSVRAFSDLGV 261
             +     H   S      +  +PE +     E + ++ +  F SN  ++          
Sbjct: 267 EANTMIDDH---SEGLEEISVMIPEENGDDTDEEIEEERD-GFVSNISRDH--------- 326

Query: 262 LEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSGDVGSSKCSV 310
                      + + Q++RRS+S+D  S + + +++V+ +  ++ +     ++GS + S+
Sbjct: 327 ----------GESQQQRVRRSVSLD--SLSGLRVSEVV-VGREKEKLKRGNNIGSGRSSL 357

[Close]
BLAST of Cp4.1LG15g02080 vs. NCBI nr
Match: gi|659132043|ref|XP_008465985.1| (PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis melo])

HSP 1 Score: 621.3 bits (1601), Expect = 1.0e-174
Identity = 301/358 (84.08%), Postives = 327/358 (91.34%), Query Frame = 1 

Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPDD+S PNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASA LL++YYTIISKYCGNTNRL GTGN+DP+EE+EDNHNPTLHEPWHVAT GLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 MVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSIT+CKYKRGDGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFRSNCGKNSV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PE+SQ +D EAVS DS +SF +   KNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEY----EAG 301
           RAFSDLG LEKRDT IELRDG LQQIRRSISMDHCSQN +IIADVLRLN+DE+    EAG
Sbjct: 244 RAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHREIARV 356
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+EHR IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]
BLAST of Cp4.1LG15g02080 vs. NCBI nr
Match: gi|778687904|ref|XP_011652647.1| (PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis sativus])

HSP 1 Score: 619.8 bits (1597), Expect = 3.0e-174
Identity = 302/358 (84.36%), Postives = 328/358 (91.62%), Query Frame = 1 

Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPD+ S P+FSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDN-SGPHFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASAFLL++YYTIISKYCGNTNRL GTGNHDP+EE+EDNHNPT HEPWHVAT GLDEA
Sbjct: 64  GILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEA 123

Query: 122 MVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSIT+CKYKR DGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFRSNCGKNSV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PETSQ +D EAVS DS +SF +  GKNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSV 243

Query: 242 RAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEY----EAG 301
           RAFSDLG LEKRDT+IELRDG LQQIRRSISMDHCSQNHIIIADVLRLN+D++    EAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHREIARV 356
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+EHR IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 360

[Close]
BLAST of Cp4.1LG15g02080 vs. NCBI nr
Match: gi|225427183|ref|XP_002277896.1| (PREDICTED: E3 ubiquitin-protein ligase Os04g0590900 [Vitis vinifera])

HSP 1 Score: 453.4 bits (1165), Expect = 3.7e-124
Identity = 229/360 (63.61%), Postives = 264/360 (73.33%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGS GSPK W+PY+S KDCSQGFCS+YCPQWCYI   PPP  EFPD++S PNFSPLVIAI
Sbjct: 1   MGSLGSPKIWVPYISTKDCSQGFCSLYCPQWCYIPAPPPPYFEFPDENSGPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLL+SYYTIISKYCGN  R     N D NEE EDNHNP LHEPWHVAT GLDE
Sbjct: 61  IGILASAFLLVSYYTIISKYCGNMERE-RRENQDINEELEDNHNPALHEPWHVATTGLDE 120

Query: 121 AMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSIT+CKYK+GDGLVEG+DCSVCLSEF+E++SLRLLPKCSHAFH+QCIDTWLKSHSN
Sbjct: 121 ALIKSITLCKYKKGDGLVEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFRSN----- 240
           CPLCRANIV    SP    P     P+ NE   ++   H+  AV +D ER          
Sbjct: 181 CPLCRANIVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHENVAVGEDLERVAEEEEIMRN 240

Query: 241 --CGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDE 300
               K   R FSDLG  E+RDT+IE+RD   QQIRRSIS+D+  Q  + +AD+L +N+DE
Sbjct: 241 EVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLDYSCQTRLSVADILLMNEDE 300

Query: 301 ------YEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGK 348
                  +    G VGSSK +VGE SK SHR  +LHCVMSPVS+KRSFSSGR    RH +
Sbjct: 301 DPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLLFTRHAR 359

[Close]
BLAST of Cp4.1LG15g02080 vs. NCBI nr
Match: gi|590675526|ref|XP_007039473.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 445.7 bits (1145), Expect = 7.8e-122
Identity = 223/363 (61.43%), Postives = 272/363 (74.93%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGS G+P+TW+PYM+ KDCSQGFCS+YCPQWCYI+  PPPP+EFPDDDS PNFSPLVIAI
Sbjct: 1   MGSIGNPRTWVPYMNTKDCSQGFCSLYCPQWCYIIFPPPPPIEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLL+SYYTIISKYCGN +      NHDP E  EDNH+P++HEPW  +T GLDE
Sbjct: 61  IGILASAFLLVSYYTIISKYCGNVDPSRRRENHDPGEVLEDNHSPSVHEPWQTSTTGLDE 120

Query: 121 AMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSIT+CKYK+GDGL+EG+DCSVCLSEFQED+SLRLLPKCSHAFH+ CIDTWL+SHSN
Sbjct: 121 ALIKSITVCKYKKGDGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHVHCIDTWLRSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQ-THDPEAVSQDSER--------- 240
           CPLCRANI+ + ASP    PA    P  NE++ +    T++  A +QDS R         
Sbjct: 181 CPLCRANIIFISASPLPLPPALTESPPGNESLQDRQPVTNEYAAAAQDSGRRSMQEVDRF 240

Query: 241 -SFRSNCGKNSVRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRL 300
            S  S   K   RAFSDLG  + RD+VIE+R+   QQ+RRS+SMDH  Q+ + +AD+L +
Sbjct: 241 QSDLSRLPKTPSRAFSDLGNAQGRDSVIEIREESYQQMRRSVSMDHPCQSQLSVADILHM 300

Query: 301 NDDEYEAG-----SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIR 348
           N +E         SSG  GSSK S  E SK S++  +LHCVM+PV++KRSFSSGRF L R
Sbjct: 301 NQEEDSRVEECHFSSGIAGSSKQSA-EGSKLSNKMRVLHCVMNPVAMKRSFSSGRFFLTR 360

[Close]
BLAST of Cp4.1LG15g02080 vs. NCBI nr
Match: gi|566146771|ref|XP_006368390.1| (hypothetical protein POPTR_0001s02360g [Populus trichocarpa])

HSP 1 Score: 433.7 bits (1114), Expect = 3.1e-118
Identity = 224/361 (62.05%), Postives = 272/361 (75.35%), Query Frame = 1 

Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PKT IPY++NKDCSQGFCS+YCPQWCYI+  PPPPLEF DD+SSP  SPLVIAI
Sbjct: 1   MASLGTPKTRIPYVNNKDCSQGFCSLYCPQWCYIIFPPPPPLEFLDDNSSPKISPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTG-NHDPNEEFEDNHNPTLHEPWHVATNGLD 120
           IGIL SAFLL+ YYTIISKYCGN +       NH  NEEFE +HNP+LHEPWH AT GLD
Sbjct: 61  IGILLSAFLLVIYYTIISKYCGNNDPARRRDQNHGQNEEFEGDHNPSLHEPWHAATTGLD 120

Query: 121 EAMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHS 180
           EA+++SIT+CKYK+GDGL++G+DCSVCLSEFQED+S+RLLPKCSHAFH+ CIDTWL+SHS
Sbjct: 121 EALIRSITVCKYKKGDGLIDGTDCSVCLSEFQEDESIRLLPKCSHAFHVPCIDTWLRSHS 180

Query: 181 NCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFR------ 240
           NCPLCRANIV   ASPP   P     P  NE+   + +++D  A +Q +ER  R      
Sbjct: 181 NCPLCRANIVFFSASPPQLPPPVAETPRGNESWQNSQRSNDNVAATQGTERVARDEQVMQ 240

Query: 241 --SNCGKNSVRAFSDLGVLEKRDTVIELRDGE-LQQIRRSISMDHCSQNHIIIADVLRLN 300
             +   K   R FSDLG LE+RDT+IE+RD +  Q+IRRS+SMDH  Q+H  +AD+LR+N
Sbjct: 241 NPAGDPKTPWRVFSDLGNLEERDTIIEMRDIDGYQRIRRSVSMDHPCQSHASVADILRMN 300

Query: 301 DDEY--EAGSSGDVGSSKCSVGEDSK--SSHRKTILHCVMSPVSIKRSFSSGRFSLIRHG 348
            D        SGDVGSSK S  EDSK  SS+R+ +LHCV++PV++KRSFSSGRF    HG
Sbjct: 301 QDGVVRVEDCSGDVGSSKHS-AEDSKFTSSNRRRVLHCVLNPVTMKRSFSSGRFFPTGHG 360

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g02080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL52_ARATH2.3e-6543.43RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1[more]
ATL41_ORYSJ2.5e-6442.74E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04... [more]
ATL51_ARATH2.6e-6146.73RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2[more]
ATL53_ARATH7.4e-4847.62Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2[more]
ATL54_ARATH1.3e-3635.71RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2[more]
BLAST of Cp4.1LG15g02080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH71_CUCSA2.1e-17484.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901190 PE=4 SV=1[more]
A0A061GAA2_THECC5.4e-12261.43RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015695 PE=4 S... [more]
U5GS45_POPTR2.1e-11862.05Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02360g PE=4 SV=1[more]
A0A0B2PB01_GLYSO4.2e-11457.94E3 ubiquitin-protein ligase OS=Glycine soja GN=glysoja_024234 PE=4 SV=1[more]
I1J4U6_SOYBN4.2e-11457.94Uncharacterized protein OS=Glycine max GN=GLYMA_01G017300 PE=4 SV=2[more]
BLAST of Cp4.1LG15g02080 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17600.11.3e-6643.43 RING/U-box superfamily protein[more]
AT3G03550.11.5e-6246.73 RING/U-box superfamily protein[more]
AT4G17905.14.2e-4947.62 RING/U-box superfamily protein[more]
AT1G72220.17.4e-3835.71 RING/U-box superfamily protein[more]
AT4G33565.11.7e-3433.00 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG15g02080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659132043|ref|XP_008465985.1|1.0e-17484.08PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis melo][more]
gi|778687904|ref|XP_011652647.1|3.0e-17484.36PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis sativus][more]
gi|225427183|ref|XP_002277896.1|3.7e-12463.61PREDICTED: E3 ubiquitin-protein ligase Os04g0590900 [Vitis vinifera][more]
gi|590675526|ref|XP_007039473.1|7.8e-12261.43RING/U-box superfamily protein, putative [Theobroma cacao][more]
gi|566146771|ref|XP_006368390.1|3.1e-11862.05hypothetical protein POPTR_0001s02360g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g02080.1Cp4.1LG15g02080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 142..185
score: 1.7
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 143..184
score: 8.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 143..185
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 139..188
score: 4.8
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 6..210
score: 8.5E
NoneNo IPR availablePANTHERPTHR14155:SF94RING-H2 FINGER PROTEIN ATL33-RELATEDcoord: 6..210
score: 8.5E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 137..193
score: 1.49

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g02080Cucsa.313020Cucumber (Gy14) v1cgycpeB0817
Cp4.1LG15g02080CmaCh02G016170Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g02080CmaCh11G016590Cucurbita maxima (Rimu)cmacpeB120
Cp4.1LG15g02080CmaCh19G002310Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g02080CmoCh02G016620Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g02080CmoCh11G014770Cucurbita moschata (Rifu)cmocpeB094
Cp4.1LG15g02080CmoCh19G002460Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g02080Csa3G901190Cucumber (Chinese Long) v2cpecuB239
Cp4.1LG15g02080MELO3C003420Melon (DHL92) v3.5.1cpemeB232
Cp4.1LG15g02080CSPI03G46600Wild cucumber (PI 183967)cpecpiB243
Cp4.1LG15g02080LsiUNG000310Bottle gourd (USVL1VR-Ls)cpelsiB190
Cp4.1LG15g02080Lsi03G007300Bottle gourd (USVL1VR-Ls)cpelsiB206
Cp4.1LG15g02080MELO3C003420.2Melon (DHL92) v3.6.1cpemedB271
Cp4.1LG15g02080CsaV3_3G049060Cucumber (Chinese Long) v3cpecucB0298
Cp4.1LG15g02080CsGy3G044050Cucumber (Gy14) v2cgybcpeB332
Cp4.1LG15g02080Carg08844Silver-seed gourdcarcpeB1094
Cp4.1LG15g02080Carg24526Silver-seed gourdcarcpeB1344
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g02080Cp4.1LG04g07030Cucurbita pepo (Zucchini)cpecpeB268
Cp4.1LG15g02080Cp4.1LG05g00050Cucurbita pepo (Zucchini)cpecpeB273
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g02080Cucumber (Gy14) v2cgybcpeB334
Cp4.1LG15g02080Melon (DHL92) v3.6.1cpemedB281
Cp4.1LG15g02080Silver-seed gourdcarcpeB0703
Cp4.1LG15g02080Silver-seed gourdcarcpeB1335
Cp4.1LG15g02080Cucumber (Chinese Long) v3cpecucB0300
Cp4.1LG15g02080Wax gourdcpewgoB0319
Cp4.1LG15g02080Cucurbita pepo (Zucchini)cpecpeB231
Cp4.1LG15g02080Cucurbita pepo (Zucchini)cpecpeB285
Cp4.1LG15g02080Cucumber (Gy14) v1cgycpeB0848
Cp4.1LG15g02080Cucurbita maxima (Rimu)cmacpeB349
Cp4.1LG15g02080Cucurbita maxima (Rimu)cmacpeB819
Cp4.1LG15g02080Cucurbita moschata (Rifu)cmocpeB310
Cp4.1LG15g02080Cucurbita moschata (Rifu)cmocpeB773
Cp4.1LG15g02080Wild cucumber (PI 183967)cpecpiB245
Cp4.1LG15g02080Cucumber (Chinese Long) v2cpecuB241
Cp4.1LG15g02080Bottle gourd (USVL1VR-Ls)cpelsiB218
Cp4.1LG15g02080Watermelon (Charleston Gray)cpewcgB216
Cp4.1LG15g02080Watermelon (Charleston Gray)cpewcgB227
Cp4.1LG15g02080Watermelon (97103) v1cpewmB235
Cp4.1LG15g02080Watermelon (97103) v1cpewmB249
Cp4.1LG15g02080Melon (DHL92) v3.5.1cpemeB240