CmaCh19G002310 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G002310
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ring finger protein, putative
Location	Cma_Chr19 : 1586009 .. 1587076 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGAAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCTGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAGACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGGAGTTTGAGAAGTGATTGTGGGAAGACCACGGTTCGTGCCTTCAGTGACCTCGGAGTACCGGAGAAAAGAGACACGGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCAGATGTTCTACATCTAAATGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACACTGGGAAATCGCCCGTGTCTGA

mRNA sequence

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGAAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCTGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAGACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGGAGTTTGAGAAGTGATTGTGGGAAGACCACGGTTCGTGCCTTCAGTGACCTCGGAGTACCGGAGAAAAGAGACACGGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCAGATGTTCTACATCTAAATGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACACTGGGAAATCGCCCGTGTCTGA

Coding sequence (CDS)

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGAAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCTGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAGACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGGAGTTTGAGAAGTGATTGTGGGAAGACCACGGTTCGTGCCTTCAGTGACCTCGGAGTACCGGAGAAAAGAGACACGGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCAGATGTTCTACATCTAAATGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACACTGGGAAATCGCCCGTGTCTGA

Protein sequence

MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHWEIARV

Homology

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BLAST of CmaCh19G002310 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.0e-65
Identity = 162/371 (43.67%), Postives = 218/371 (58.76%), Query Frame = 1


Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDD---SSPNFSPLVIAIIG 65
           +P  W PY S  DCSQG C++YCPQWCY++  PPPP  F DDD   SS +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPT--LHEPWHVATN--GL 125
           IL SA +L+SYYT+ISKYC   ++         +E    NHN          ++TN  GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQT------SSSETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 126 DEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSH 185
           +E+M+KSITV KYK GDG V+GSDCSVCLSEF+E++SLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 186 SNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQ------------ 245
           SNCPLCRA +  V+ +P   +  + +  + N    +++  H   +VS+            
Sbjct: 184 SNCPLCRAFVTGVN-NPTASVGQNVSVVVAN----QSNSAHQTGSVSEINLNLAGYESQT 243

Query: 246 ---DSERSLRS-DCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHII 305
              DS   +   + G     A S+L +PE+R    E +D +   IRRS+S++  S   + 
Sbjct: 244 GDFDSVVVIEDLEIGSRNSDARSELQLPEERR---ETKDEDSLPIRRSVSLN--SGVVVS 303

Query: 306 IADVLHLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVS------IKRSFS 348
           IADVL   +D  E G SG VG+S+    E+ +    KTI     +  S        RS S
Sbjct: 304 IADVLREIED--EEGESGGVGTSQRR--EEGEDGDGKTIPPTEANQRSGGVSGFFVRSLS 354

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BLAST of CmaCh19G002310 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 9.7e-64
Identity = 162/370 (43.78%), Postives = 200/370 (54.05%), Query Frame = 1


Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFP----DDDSSPNFSPLVIAII 65
           S   W+PY   +DCSQG CS+YCPQWCY +  PPPP +      DD S P FSPLVIAII
Sbjct: 4   SAPAWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAII 63

Query: 66  GILASAFLLLSYYTIISKYCGNTN----RLFGT-------GNHDPNEEFEDNHNPTLHEP 125
           G+LASAFLL+SYYT ISKYCG  +    R+FG+       G    +     +     HE 
Sbjct: 64  GVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHES 123

Query: 126 WHVAT-NGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQ 185
           W+V+  +GLDE ++  ITVCKY+RGDG V  +DCSVCL EF + +SLRLLP+CSHAFH Q
Sbjct: 124 WNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQ 183

Query: 186 CIDTWLKSHSNCPLCRANIVSVD---ASPPVH--LPASNAYPITNETMP-----ETSQTH 245
           CIDTWLKSHSNCPLCRANI  V    ASP      P       T+E +      E     
Sbjct: 184 CIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHEVVVVMDGLENLCEE 243

Query: 246 DPEAVSQDSERSLRSDCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQN 305
             EAVS+ S      D  K            E+ +   E+R+      R + S D    N
Sbjct: 244 QQEAVSRASTADDDHD-AKDVAEGM------EEANGAAEIREEGSPPKRGASSFDLHRDN 303

Query: 306 HIIIADVLHLN-DDEYEAGS-----SGDVGSSKCSVGEDSKS----SHRKTILHCVMSPV 340
            + IADVL  + +DE  A       +G  G+S+   GE+SK     S R   L   M  +
Sbjct: 304 RMCIADVLQESMEDELTAARESGLLAGGAGTSRRCHGENSKGRGGRSRRALQLQDAMEAL 363

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BLAST of CmaCh19G002310 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-61
Identity = 159/336 (47.32%), Postives = 199/336 (59.23%), Query Frame = 1


Query: 1   MGSYGSPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMLSPPPP--LEFPDDDSSPNFSPLV 60
           MGS G+P  W   Y S +DCSQG CSVYCPQWCY++  PPP   L+  DD SS +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLLSYYTIISKYCGNT------------NRLFGT----GNHDPNEEFED 120
           IA+IGILASAF+L+SYYT+ISKYC               NR+       G ++ N     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 NHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPK 180
           N N T+        +GLDE+++KSITV KY++ DG VE SDCSVCLSEFQE++SLRLLPK
Sbjct: 121 NPNQTIGGG---GGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 180

Query: 181 CSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDP 240
           C+HAFH+ CIDTWLKSHSNCPLCRA IV+  A   V L  +N   +T      T      
Sbjct: 181 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--TNQQIVTENNSISTGD-DSV 240

Query: 241 EAVSQDSERSLRSDCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHI 300
             V+ D E S   +    TV   S    PE +D+    RDGE    RRS S+ +     +
Sbjct: 241 VVVNLDLENSRSRN---ETVNEGSTPKPPEMQDS----RDGE---ERRSASL-NSGGGVV 300

Query: 301 IIADVL-HLNDDEYEAGSSGDVGSSK-CSVGEDSKS 316
            IAD+L  + DDE  AG    VG+S+    GE  K+
Sbjct: 301 SIADILREIEDDEESAG----VGTSRWVEEGEGEKT 315

[Close]

BLAST of CmaCh19G002310 vs. Swiss-Prot
Match: ATL53_ARATH (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 9.7e-48
Identity = 100/210 (47.62%), Postives = 132/210 (62.86%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMLSPPPPL--EFPDDD--SSPNFSP 60
           M S  +P  W  Y++ +DC+QG CS +CPQWC YI  SPPP    +F +D   S+PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTL---HEPWH 120
           LVIAI GI A+AFLL +YYT++SKYC N            ++   D ++P      +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATNGLDEAMVKSITVCKYKRGDG--LVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHL 180
           +  +T GLD+ ++K I   K K+      + G+DCS+CL EF ED+SLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVDASPPVH 199
            CID WLKSHSNCPLCRA I+      P H
Sbjct: 181 VCIDRWLKSHSNCPLCRAKIIVPTTQQPEH 210

[Close]

BLAST of CmaCh19G002310 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 5.9e-37
Identity = 95/266 (35.71%), Postives = 131/266 (49.25%), Query Frame = 1


Query: 18  DCSQGFCSVYCPQWCY-----IMLSPPPP------------------LEFPDDDSSPNFS 77
           DCS G C   CP  CY       +SP  P                  +  P  DSS +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PLVIAIIGILASAFLLLSYYTIISKYCGNTNRL----FGTGNHDPN----EEFEDNHNPT 137
            + I  I     A LL  ++ +   +  + NR+    + + N D +    EEF+D     
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 138 LHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAF 197
            H  W + T GL ++++ SIT+C YKRGDGL+E +DC VCL+EF+ED+SLRLLPKC+HAF
Sbjct: 142 -HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAF 201

Query: 198 HLQCIDTWLKSHSNCPLCRANIVSVDASPPVH------LPASNAYPITNETMPETSQTHD 247
           H+ CIDTWL SH+NCPLCRA I  +  + P +       P  +   + N+ + E      
Sbjct: 202 HISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEEDHGEI 261

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BLAST of CmaCh19G002310 vs. TrEMBL
Match: A0A0A0LH71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901190 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 6.3e-171
Identity = 297/358 (82.96%), Postives = 324/358 (90.50%), Query Frame = 1


Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPD+ S P+FSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDN-SGPHFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASAFLL++YYTIISKYCGNTNRL GTGNHDP+EE+EDNHNPT HEPWHVAT GLDEA
Sbjct: 64  GILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEA 123

Query: 122 MVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSITVCKYKR DGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKTTV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PETSQ +D EAVS DS +S  ++ GK +V
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSV 243

Query: 242 RAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDEY----EAG 301
           RAFSDLG  EKRDT+IELRDG LQQIRRSISMDHCSQNHIIIADVL LN+D++    EAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHWEIARV 356
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+EH  IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 360

[Close]

BLAST of CmaCh19G002310 vs. TrEMBL
Match: A0A061GAA2_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015695 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.2e-123
Identity = 226/363 (62.26%), Postives = 275/363 (75.76%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGS G+P+TW+PYM+ KDCSQGFCS+YCPQWCYI+  PPPP+EFPDDDS PNFSPLVIAI
Sbjct: 1   MGSIGNPRTWVPYMNTKDCSQGFCSLYCPQWCYIIFPPPPPIEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLL+SYYTIISKYCGN +      NHDP E  EDNH+P++HEPW  +T GLDE
Sbjct: 61  IGILASAFLLVSYYTIISKYCGNVDPSRRRENHDPGEVLEDNHSPSVHEPWQTSTTGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSITVCKYK+GDGL+EG+DCSVCLSEFQED+SLRLLPKCSHAFH+ CIDTWL+SHSN
Sbjct: 121 ALIKSITVCKYKKGDGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHVHCIDTWLRSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQ-THDPEAVSQDSER-------SL 240
           CPLCRANI+ + ASP    PA    P  NE++ +    T++  A +QDS R         
Sbjct: 181 CPLCRANIIFISASPLPLPPALTESPPGNESLQDRQPVTNEYAAAAQDSGRRSMQEVDRF 240

Query: 241 RSDCG---KTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHL 300
           +SD     KT  RAFSDLG  + RD+VIE+R+   QQ+RRS+SMDH  Q+ + +AD+LH+
Sbjct: 241 QSDLSRLPKTPSRAFSDLGNAQGRDSVIEIREESYQQMRRSVSMDHPCQSQLSVADILHM 300

Query: 301 NDDEYEA-----GSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIR 348
           N +E         SSG  GSSK S  E SK S++  +LHCVM+PV++KRSFSSGRF L R
Sbjct: 301 NQEEDSRVEECHFSSGIAGSSKQS-AEGSKLSNKMRVLHCVMNPVAMKRSFSSGRFFLTR 360

[Close]

BLAST of CmaCh19G002310 vs. TrEMBL
Match: U5GS45_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02360g PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 4.7e-118
Identity = 224/361 (62.05%), Postives = 271/361 (75.07%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PKT IPY++NKDCSQGFCS+YCPQWCYI+  PPPPLEF DD+SSP  SPLVIAI
Sbjct: 1   MASLGTPKTRIPYVNNKDCSQGFCSLYCPQWCYIIFPPPPPLEFLDDNSSPKISPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTG-NHDPNEEFEDNHNPTLHEPWHVATNGLD 120
           IGIL SAFLL+ YYTIISKYCGN +       NH  NEEFE +HNP+LHEPWH AT GLD
Sbjct: 61  IGILLSAFLLVIYYTIISKYCGNNDPARRRDQNHGQNEEFEGDHNPSLHEPWHAATTGLD 120

Query: 121 EAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHS 180
           EA+++SITVCKYK+GDGL++G+DCSVCLSEFQED+S+RLLPKCSHAFH+ CIDTWL+SHS
Sbjct: 121 EALIRSITVCKYKKGDGLIDGTDCSVCLSEFQEDESIRLLPKCSHAFHVPCIDTWLRSHS 180

Query: 181 NCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSD---- 240
           NCPLCRANIV   ASPP   P     P  NE+   + +++D  A +Q +ER  R +    
Sbjct: 181 NCPLCRANIVFFSASPPQLPPPVAETPRGNESWQNSQRSNDNVAATQGTERVARDEQVMQ 240

Query: 241 ----CGKTTVRAFSDLGVPEKRDTVIELRDGE-LQQIRRSISMDHCSQNHIIIADVLHLN 300
                 KT  R FSDLG  E+RDT+IE+RD +  Q+IRRS+SMDH  Q+H  +AD+L +N
Sbjct: 241 NPAGDPKTPWRVFSDLGNLEERDTIIEMRDIDGYQRIRRSVSMDHPCQSHASVADILRMN 300

Query: 301 DDEY--EAGSSGDVGSSKCSVGEDSK--SSHRKTILHCVMSPVSIKRSFSSGRFSLIRHG 348
            D        SGDVGSSK S  EDSK  SS+R+ +LHCV++PV++KRSFSSGRF    HG
Sbjct: 301 QDGVVRVEDCSGDVGSSKHS-AEDSKFTSSNRRRVLHCVLNPVTMKRSFSSGRFFPTGHG 360

[Close]

BLAST of CmaCh19G002310 vs. TrEMBL
Match: A0A0B2PB01_GLYSO (E3 ubiquitin-protein ligase OS=Glycine soja GN=glysoja_024234 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 4.2e-114
Identity = 209/359 (58.22%), Postives = 265/359 (73.82%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PK+W+PYM+NKDCSQGFCS+YCPQWCY++  PPPP EFPDDDSSPNFSPLVIA+
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAV 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IG+L SAFLL+SYYTIISKYCG+      + NH+ N E E++HNP+LHEPWH  T GLDE
Sbjct: 61  IGVLVSAFLLVSYYTIISKYCGSRESS-QSENHEENVELEEDHNPSLHEPWHAPTIGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSITVCKYK+GDGLVE +DCSVCLSEFQ+D+S+RLLPKCSHAFHL CIDTWLKSHS+
Sbjct: 121 ALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRLLPKCSHAFHLPCIDTWLKSHSS 180

Query: 181 CPLCRANIVSVDAS----------PPVHLPASNAYPITNETMPETSQTHDPEAVSQDSER 240
           CPLCRA+I + +A+          PP     S+     +E +   ++  + +AV  +   
Sbjct: 181 CPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAVEGEVTL 240

Query: 241 SLRSDCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQ--NHIIIADVLH 300
           +      K+ +RA SDLG    R +VIE+RD     IRR++SMDH  Q  + + IADVLH
Sbjct: 241 THGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLSIADVLH 300

Query: 301 LNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGK 348
           +N +    G S   G SK S GE SKSS+R+ +LHCV+SP+++KRSFSSGRFSL R+G+
Sbjct: 301 VNQE--HEGCSNGAGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLSRNGR 356

[Close]

BLAST of CmaCh19G002310 vs. TrEMBL
Match: I1J4U6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G017300 PE=4 SV=2)

HSP 1 Score: 419.5 bits (1077), Expect = 4.2e-114
Identity = 209/359 (58.22%), Postives = 265/359 (73.82%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PK+W+PYM+NKDCSQGFCS+YCPQWCY++  PPPP EFPDDDSSPNFSPLVIA+
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAV 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IG+L SAFLL+SYYTIISKYCG+      + NH+ N E E++HNP+LHEPWH  T GLDE
Sbjct: 61  IGVLVSAFLLVSYYTIISKYCGSRESS-QSENHEENVELEEDHNPSLHEPWHAPTIGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSITVCKYK+GDGLVE +DCSVCLSEFQ+D+S+RLLPKCSHAFHL CIDTWLKSHS+
Sbjct: 121 ALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRLLPKCSHAFHLPCIDTWLKSHSS 180

Query: 181 CPLCRANIVSVDAS----------PPVHLPASNAYPITNETMPETSQTHDPEAVSQDSER 240
           CPLCRA+I + +A+          PP     S+     +E +   ++  + +AV  +   
Sbjct: 181 CPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAVEGEVTL 240

Query: 241 SLRSDCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQ--NHIIIADVLH 300
           +      K+ +RA SDLG    R +VIE+RD     IRR++SMDH  Q  + + IADVLH
Sbjct: 241 THGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLSIADVLH 300

Query: 301 LNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGK 348
           +N +    G S   G SK S GE SKSS+R+ +LHCV+SP+++KRSFSSGRFSL R+G+
Sbjct: 301 VNQE--HEGCSNGAGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLSRNGR 356

[Close]

BLAST of CmaCh19G002310 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 251.9 bits (642), Expect = 5.8e-67
Identity = 162/371 (43.67%), Postives = 218/371 (58.76%), Query Frame = 1


Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDD---SSPNFSPLVIAIIG 65
           +P  W PY S  DCSQG C++YCPQWCY++  PPPP  F DDD   SS +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPT--LHEPWHVATN--GL 125
           IL SA +L+SYYT+ISKYC   ++         +E    NHN          ++TN  GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQT------SSSETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 126 DEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSH 185
           +E+M+KSITV KYK GDG V+GSDCSVCLSEF+E++SLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 186 SNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQ------------ 245
           SNCPLCRA +  V+ +P   +  + +  + N    +++  H   +VS+            
Sbjct: 184 SNCPLCRAFVTGVN-NPTASVGQNVSVVVAN----QSNSAHQTGSVSEINLNLAGYESQT 243

Query: 246 ---DSERSLRS-DCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHII 305
              DS   +   + G     A S+L +PE+R    E +D +   IRRS+S++  S   + 
Sbjct: 244 GDFDSVVVIEDLEIGSRNSDARSELQLPEERR---ETKDEDSLPIRRSVSLN--SGVVVS 303

Query: 306 IADVLHLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVS------IKRSFS 348
           IADVL   +D  E G SG VG+S+    E+ +    KTI     +  S        RS S
Sbjct: 304 IADVLREIED--EEGESGGVGTSQRR--EEGEDGDGKTIPPTEANQRSGGVSGFFVRSLS 354

[Close]

BLAST of CmaCh19G002310 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 237.3 bits (604), Expect = 1.5e-62
Identity = 159/336 (47.32%), Postives = 199/336 (59.23%), Query Frame = 1


Query: 1   MGSYGSPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMLSPPPP--LEFPDDDSSPNFSPLV 60
           MGS G+P  W   Y S +DCSQG CSVYCPQWCY++  PPP   L+  DD SS +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLLSYYTIISKYCGNT------------NRLFGT----GNHDPNEEFED 120
           IA+IGILASAF+L+SYYT+ISKYC               NR+       G ++ N     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 NHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPK 180
           N N T+        +GLDE+++KSITV KY++ DG VE SDCSVCLSEFQE++SLRLLPK
Sbjct: 121 NPNQTIGGG---GGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 180

Query: 181 CSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDP 240
           C+HAFH+ CIDTWLKSHSNCPLCRA IV+  A   V L  +N   +T      T      
Sbjct: 181 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--TNQQIVTENNSISTGD-DSV 240

Query: 241 EAVSQDSERSLRSDCGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHI 300
             V+ D E S   +    TV   S    PE +D+    RDGE    RRS S+ +     +
Sbjct: 241 VVVNLDLENSRSRN---ETVNEGSTPKPPEMQDS----RDGE---ERRSASL-NSGGGVV 300

Query: 301 IIADVL-HLNDDEYEAGSSGDVGSSK-CSVGEDSKS 316
            IAD+L  + DDE  AG    VG+S+    GE  K+
Sbjct: 301 SIADILREIEDDEESAG----VGTSRWVEEGEGEKT 315

[Close]

BLAST of CmaCh19G002310 vs. TAIR10
Match: AT4G17905.1 (AT4G17905.1 RING/U-box superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 5.5e-49
Identity = 100/210 (47.62%), Postives = 132/210 (62.86%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMLSPPPPL--EFPDDD--SSPNFSP 60
           M S  +P  W  Y++ +DC+QG CS +CPQWC YI  SPPP    +F +D   S+PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTL---HEPWH 120
           LVIAI GI A+AFLL +YYT++SKYC N            ++   D ++P      +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATNGLDEAMVKSITVCKYKRGDG--LVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHL 180
           +  +T GLD+ ++K I   K K+      + G+DCS+CL EF ED+SLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVDASPPVH 199
            CID WLKSHSNCPLCRA I+      P H
Sbjct: 181 VCIDRWLKSHSNCPLCRAKIIVPTTQQPEH 210

[Close]

BLAST of CmaCh19G002310 vs. TAIR10
Match: AT1G72220.1 (AT1G72220.1 RING/U-box superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-38
Identity = 95/266 (35.71%), Postives = 131/266 (49.25%), Query Frame = 1


Query: 18  DCSQGFCSVYCPQWCY-----IMLSPPPP------------------LEFPDDDSSPNFS 77
           DCS G C   CP  CY       +SP  P                  +  P  DSS +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PLVIAIIGILASAFLLLSYYTIISKYCGNTNRL----FGTGNHDPN----EEFEDNHNPT 137
            + I  I     A LL  ++ +   +  + NR+    + + N D +    EEF+D     
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 138 LHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAF 197
            H  W + T GL ++++ SIT+C YKRGDGL+E +DC VCL+EF+ED+SLRLLPKC+HAF
Sbjct: 142 -HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAF 201

Query: 198 HLQCIDTWLKSHSNCPLCRANIVSVDASPPVH------LPASNAYPITNETMPETSQTHD 247
           H+ CIDTWL SH+NCPLCRA I  +  + P +       P  +   + N+ + E      
Sbjct: 202 HISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEEDHGEI 261

[Close]

BLAST of CmaCh19G002310 vs. TAIR10
Match: AT4G33565.1 (AT4G33565.1 RING/U-box superfamily protein)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-34
Identity = 101/300 (33.67%), Postives = 154/300 (51.33%), Query Frame = 1


Query: 22  GFCSVYC----PQWCYIMLSP--PPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYT 81
           G+CS YC    P  C I++     PP E   DD+      L+I+   I+ + FLL +   
Sbjct: 87  GYCSSYCLDECPSICEIVVISGLSPPAEIHHDDNLKRI--LIISASSIITTLFLL-TLLV 146

Query: 82  IISKYCGNTNRLFGTGNHDPNEEFE----DNHNPTL--HEPWHVATNGLDEAMVKSITVC 141
           +  K+     R   T      EE      D   P +  H  WH+ T GL+  ++ SI VC
Sbjct: 147 LCFKFYYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVC 206

Query: 142 KYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIV 201
           +Y + DG+VEG+DCSVCLSEF+E+++LRLLPKC HAFHL CIDTWL+SH+NCPLCRA IV
Sbjct: 207 QYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV 266

Query: 202 SVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKTTVRAFSDLGV 261
             +     H          +E + E S    PE    D++  +  +          D G 
Sbjct: 267 EANTMIDDH----------SEGLEEIS-VMIPEENGDDTDEEIEEERDGFVSNISRDHG- 326

Query: 262 PEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDEYEAGSSGDVGSSKCSV 310
                      + + Q++RRS+S+D  S + + +++V+ +  ++ +     ++GS + S+
Sbjct: 327 -----------ESQQQRVRRSVSLD--SLSGLRVSEVV-VGREKEKLKRGNNIGSGRSSL 357

[Close]

BLAST of CmaCh19G002310 vs. NCBI nr
Match: gi|659132043|ref|XP_008465985.1| (PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis melo])

HSP 1 Score: 610.1 bits (1572), Expect = 2.4e-171
Identity = 296/358 (82.68%), Postives = 323/358 (90.22%), Query Frame = 1


Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPDD+S PNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASA LL++YYTIISKYCGNTNRL GTGN+DP+EE+EDNHNPTLHEPWHVAT GLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 MVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSITVCKYKRGDGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKTTV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PE+SQ +D EAVS DS +S  ++  K +V
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDEY----EAG 301
           RAFSDLG  EKRDT IELRDG LQQIRRSISMDHCSQN +IIADVL LN+DE+    EAG
Sbjct: 244 RAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHWEIARV 356
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+EH  IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of CmaCh19G002310 vs. NCBI nr
Match: gi|778687904|ref|XP_011652647.1| (PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis sativus])

HSP 1 Score: 608.2 bits (1567), Expect = 9.1e-171
Identity = 297/358 (82.96%), Postives = 324/358 (90.50%), Query Frame = 1


Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPD+ S P+FSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDN-SGPHFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASAFLL++YYTIISKYCGNTNRL GTGNHDP+EE+EDNHNPT HEPWHVAT GLDEA
Sbjct: 64  GILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEA 123

Query: 122 MVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSITVCKYKR DGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKTTV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PETSQ +D EAVS DS +S  ++ GK +V
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSV 243

Query: 242 RAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDEY----EAG 301
           RAFSDLG  EKRDT+IELRDG LQQIRRSISMDHCSQNHIIIADVL LN+D++    EAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHWEIARV 356
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+EH  IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 360

[Close]

BLAST of CmaCh19G002310 vs. NCBI nr
Match: gi|225427183|ref|XP_002277896.1| (PREDICTED: E3 ubiquitin-protein ligase Os04g0590900 [Vitis vinifera])

HSP 1 Score: 456.1 bits (1172), Expect = 5.8e-125
Identity = 230/360 (63.89%), Postives = 266/360 (73.89%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGS GSPK W+PY+S KDCSQGFCS+YCPQWCYI   PPP  EFPD++S PNFSPLVIAI
Sbjct: 1   MGSLGSPKIWVPYISTKDCSQGFCSLYCPQWCYIPAPPPPYFEFPDENSGPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLL+SYYTIISKYCGN  R     N D NEE EDNHNP LHEPWHVAT GLDE
Sbjct: 61  IGILASAFLLVSYYTIISKYCGNMERE-RRENQDINEELEDNHNPALHEPWHVATTGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSIT+CKYK+GDGLVEG+DCSVCLSEF+E++SLRLLPKCSHAFH+QCIDTWLKSHSN
Sbjct: 121 ALIKSITLCKYKKGDGLVEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSD----- 240
           CPLCRANIV    SP    P     P+ NE   ++   H+  AV +D ER    +     
Sbjct: 181 CPLCRANIVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHENVAVGEDLERVAEEEEIMRN 240

Query: 241 --CGKTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDE 300
               KT  R FSDLG  E+RDT+IE+RD   QQIRRSIS+D+  Q  + +AD+L +N+DE
Sbjct: 241 EVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLDYSCQTRLSVADILLMNEDE 300

Query: 301 ------YEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGK 348
                  +    G VGSSK +VGE SK SHR  +LHCVMSPVS+KRSFSSGR    RH +
Sbjct: 301 DPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLLFTRHAR 359

[Close]

BLAST of CmaCh19G002310 vs. NCBI nr
Match: gi|590675526|ref|XP_007039473.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 450.3 bits (1157), Expect = 3.2e-123
Identity = 226/363 (62.26%), Postives = 275/363 (75.76%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGS G+P+TW+PYM+ KDCSQGFCS+YCPQWCYI+  PPPP+EFPDDDS PNFSPLVIAI
Sbjct: 1   MGSIGNPRTWVPYMNTKDCSQGFCSLYCPQWCYIIFPPPPPIEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLL+SYYTIISKYCGN +      NHDP E  EDNH+P++HEPW  +T GLDE
Sbjct: 61  IGILASAFLLVSYYTIISKYCGNVDPSRRRENHDPGEVLEDNHSPSVHEPWQTSTTGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSITVCKYK+GDGL+EG+DCSVCLSEFQED+SLRLLPKCSHAFH+ CIDTWL+SHSN
Sbjct: 121 ALIKSITVCKYKKGDGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHVHCIDTWLRSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQ-THDPEAVSQDSER-------SL 240
           CPLCRANI+ + ASP    PA    P  NE++ +    T++  A +QDS R         
Sbjct: 181 CPLCRANIIFISASPLPLPPALTESPPGNESLQDRQPVTNEYAAAAQDSGRRSMQEVDRF 240

Query: 241 RSDCG---KTTVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHL 300
           +SD     KT  RAFSDLG  + RD+VIE+R+   QQ+RRS+SMDH  Q+ + +AD+LH+
Sbjct: 241 QSDLSRLPKTPSRAFSDLGNAQGRDSVIEIREESYQQMRRSVSMDHPCQSQLSVADILHM 300

Query: 301 NDDEYEA-----GSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIR 348
           N +E         SSG  GSSK S  E SK S++  +LHCVM+PV++KRSFSSGRF L R
Sbjct: 301 NQEEDSRVEECHFSSGIAGSSKQS-AEGSKLSNKMRVLHCVMNPVAMKRSFSSGRFFLTR 360

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BLAST of CmaCh19G002310 vs. NCBI nr
Match: gi|566146771|ref|XP_006368390.1| (hypothetical protein POPTR_0001s02360g [Populus trichocarpa])

HSP 1 Score: 432.6 bits (1111), Expect = 6.8e-118
Identity = 224/361 (62.05%), Postives = 271/361 (75.07%), Query Frame = 1


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           M S G+PKT IPY++NKDCSQGFCS+YCPQWCYI+  PPPPLEF DD+SSP  SPLVIAI
Sbjct: 1   MASLGTPKTRIPYVNNKDCSQGFCSLYCPQWCYIIFPPPPPLEFLDDNSSPKISPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTG-NHDPNEEFEDNHNPTLHEPWHVATNGLD 120
           IGIL SAFLL+ YYTIISKYCGN +       NH  NEEFE +HNP+LHEPWH AT GLD
Sbjct: 61  IGILLSAFLLVIYYTIISKYCGNNDPARRRDQNHGQNEEFEGDHNPSLHEPWHAATTGLD 120

Query: 121 EAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHS 180
           EA+++SITVCKYK+GDGL++G+DCSVCLSEFQED+S+RLLPKCSHAFH+ CIDTWL+SHS
Sbjct: 121 EALIRSITVCKYKKGDGLIDGTDCSVCLSEFQEDESIRLLPKCSHAFHVPCIDTWLRSHS 180

Query: 181 NCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSD---- 240
           NCPLCRANIV   ASPP   P     P  NE+   + +++D  A +Q +ER  R +    
Sbjct: 181 NCPLCRANIVFFSASPPQLPPPVAETPRGNESWQNSQRSNDNVAATQGTERVARDEQVMQ 240

Query: 241 ----CGKTTVRAFSDLGVPEKRDTVIELRDGE-LQQIRRSISMDHCSQNHIIIADVLHLN 300
                 KT  R FSDLG  E+RDT+IE+RD +  Q+IRRS+SMDH  Q+H  +AD+L +N
Sbjct: 241 NPAGDPKTPWRVFSDLGNLEERDTIIEMRDIDGYQRIRRSVSMDHPCQSHASVADILRMN 300

Query: 301 DDEY--EAGSSGDVGSSKCSVGEDSK--SSHRKTILHCVMSPVSIKRSFSSGRFSLIRHG 348
            D        SGDVGSSK S  EDSK  SS+R+ +LHCV++PV++KRSFSSGRF    HG
Sbjct: 301 QDGVVRVEDCSGDVGSSKHS-AEDSKFTSSNRRRVLHCVLNPVTMKRSFSSGRFFPTGHG 360

The following BLAST results are available for this feature:

BLAST of CmaCh19G002310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL52_ARATH	1.0e-65	43.67	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1	[more]
ATL41_ORYSJ	9.7e-64	43.78	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04...	[more]
ATL51_ARATH	2.6e-61	47.32	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2	[more]
ATL53_ARATH	9.7e-48	47.62	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2	[more]
ATL54_ARATH	5.9e-37	35.71	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2	[more]

BLAST of CmaCh19G002310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH71_CUCSA	6.3e-171	82.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901190 PE=4 SV=1	[more]
A0A061GAA2_THECC	2.2e-123	62.26	RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015695 PE=4 S...	[more]
U5GS45_POPTR	4.7e-118	62.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02360g PE=4 SV=1	[more]
A0A0B2PB01_GLYSO	4.2e-114	58.22	E3 ubiquitin-protein ligase OS=Glycine soja GN=glysoja_024234 PE=4 SV=1	[more]
I1J4U6_SOYBN	4.2e-114	58.22	Uncharacterized protein OS=Glycine max GN=GLYMA_01G017300 PE=4 SV=2	[more]

BLAST of CmaCh19G002310 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17600.1	5.8e-67	43.67	RING/U-box superfamily protein	[more]
AT3G03550.1	1.5e-62	47.32	RING/U-box superfamily protein	[more]
AT4G17905.1	5.5e-49	47.62	RING/U-box superfamily protein	[more]
AT1G72220.1	3.3e-38	35.71	RING/U-box superfamily protein	[more]
AT4G33565.1	1.3e-34	33.67	RING/U-box superfamily protein	[more]

BLAST of CmaCh19G002310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132043\|ref\|XP_008465985.1\|	2.4e-171	82.68	PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis melo]	[more]
gi\|778687904\|ref\|XP_011652647.1\|	9.1e-171	82.96	PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis sativus]	[more]
gi\|225427183\|ref\|XP_002277896.1\|	5.8e-125	63.89	PREDICTED: E3 ubiquitin-protein ligase Os04g0590900 [Vitis vinifera]	[more]
gi\|590675526\|ref\|XP_007039473.1\|	3.2e-123	62.26	RING/U-box superfamily protein, putative [Theobroma cacao]	[more]
gi\|566146771\|ref\|XP_006368390.1\|	6.8e-118	62.05	hypothetical protein POPTR_0001s02360g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G002310.1	CmaCh19G002310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 142..185 score: 1.7
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 143..184 score: 8.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 143..185 score: 1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 139..188 score: 4.8
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 6..210 score: 2.8E
None	No IPR available	PANTHER	PTHR14155:SF94	RING-H2 FINGER PROTEIN ATL33-RELATED	coord: 6..210 score: 2.8E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 137..193 score: 1.31

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G002310	Cucsa.313020	Cucumber (Gy14) v1	cgycmaB0867
CmaCh19G002310	Csa3G901190	Cucumber (Chinese Long) v2	cmacuB510
CmaCh19G002310	MELO3C003420	Melon (DHL92) v3.5.1	cmameB472
CmaCh19G002310	CSPI03G46600	Wild cucumber (PI 183967)	cmacpiB517
CmaCh19G002310	CmoCh19G002460	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G002310	CmoCh02G016620	Cucurbita moschata (Rifu)	cmacmoB523
CmaCh19G002310	LsiUNG000310	Bottle gourd (USVL1VR-Ls)	cmalsiB462
CmaCh19G002310	Lsi03G007300	Bottle gourd (USVL1VR-Ls)	cmalsiB482
CmaCh19G002310	Cp4.1LG05g00050	Cucurbita pepo (Zucchini)	cmacpeB543
CmaCh19G002310	Cp4.1LG15g02080	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G002310	MELO3C003420.2	Melon (DHL92) v3.6.1	cmamedB546
CmaCh19G002310	CsaV3_3G049060	Cucumber (Chinese Long) v3	cmacucB0615
CmaCh19G002310	Cla97C09G177750	Watermelon (97103) v2	cmawmbB552
CmaCh19G002310	Bhi05G000739	Wax gourd	cmawgoB0655
CmaCh19G002310	Bhi05G000316	Wax gourd	cmawgoB0644
CmaCh19G002310	CsGy3G044050	Cucumber (Gy14) v2	cgybcmaB376
CmaCh19G002310	Carg08844	Silver-seed gourd	carcmaB1082
CmaCh19G002310	Carg24526	Silver-seed gourd	carcmaB1339

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G002310	CmaCh11G016590	Cucurbita maxima (Rimu)	cmacmaB153
CmaCh19G002310	CmaCh02G016170	Cucurbita maxima (Rimu)	cmacmaB450

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G002310	Cucumber (Gy14) v2	cgybcmaB378
CmaCh19G002310	Melon (DHL92) v3.6.1	cmamedB556
CmaCh19G002310	Silver-seed gourd	carcmaB0698
CmaCh19G002310	Silver-seed gourd	carcmaB1330
CmaCh19G002310	Cucumber (Chinese Long) v3	cmacucB0617
CmaCh19G002310	Watermelon (97103) v2	cmawmbB523
CmaCh19G002310	Watermelon (97103) v2	cmawmbB548
CmaCh19G002310	Cucurbita maxima (Rimu)	cmacmaB343
CmaCh19G002310	Cucurbita maxima (Rimu)	cmacmaB459
CmaCh19G002310	Cucumber (Gy14) v1	cgycmaB0891
CmaCh19G002310	Cucurbita moschata (Rifu)	cmacmoB504
CmaCh19G002310	Cucurbita moschata (Rifu)	cmacmoB531
CmaCh19G002310	Wild cucumber (PI 183967)	cmacpiB519
CmaCh19G002310	Cucumber (Chinese Long) v2	cmacuB512
CmaCh19G002310	Melon (DHL92) v3.5.1	cmameB480
CmaCh19G002310	Watermelon (Charleston Gray)	cmawcgB441
CmaCh19G002310	Watermelon (Charleston Gray)	cmawcgB452
CmaCh19G002310	Watermelon (97103) v1	cmawmB471
CmaCh19G002310	Watermelon (97103) v1	cmawmB483
CmaCh19G002310	Cucurbita pepo (Zucchini)	cmacpeB521
CmaCh19G002310	Cucurbita pepo (Zucchini)	cmacpeB555
CmaCh19G002310	Bottle gourd (USVL1VR-Ls)	cmalsiB496