Cp4.1LG14g09860 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTATCGAATTTAGCCTTCCAAATTGGATCATTCTTCGGAAAAACCTTACCAGATTCTGTCTCATTCCTTAATCCTTCCAACATTTTCCGGCGACGAAGAATCGGGTATGAGCTTTATACCATGCTATCTGTATCACGTCGATTAACTCTTGCTGCTAAAATTTCGACGATCTTTGATCTTGGTTTCGATTTTTATTGCGCGAATTCCTTGATTTCATTTGAAAAAATGAGCTCTACAAATATTATTCTGTGTTTAGAGGAATTGAATTGAATTTTTAAGGTGGTAGTATGATTAGCTTGATCGATATTGGCTGCATCTGTTTACTATCTCCAGCACCATTAGATTCAATTTCTTCACATTGCTCTTTTTTCCCTTAGAAGTGTTGAAGATTAGCAGGACTCTTCGTGAAAACTAAATAATGTGAGCATAAACCAATTTGGTGAAGAAAAATTACAGAAGAAATAACAGACGGTATGAAGATTGTTTGTGATTAGATTGCTTCATGACACCATACGCAATGTGCATTTTTGGTTCTAGAATTTAGCAGTTGTCTGCAAGACACAGATGGTATTGGCTATTGGATACTTCTCCTTCATTATCTAGGTCTAGTTTGATAACCATTTGGTTTTTGTTTTTAGATTTTTTTAGCGTTGTGTTTGTTTTCTCCCTATTTTTTGTAACAATTTTCATGGAAGGATTTGAATTCTTAGCCAAATTCCATAAACGAAAACATTTTTCAAAACTACTGTTTTTTTTTAAGCAAAATTCTATCGTTCTGTTTCAAAATTCAAACGTCGATTTTGAAGCAGTCTCTTACTTTATAATTAGGACCCACCTCTTCTACCTTTTAAGGTTTTAGATTTTTCTTCTTCTTATCTATATCCTCTTTGCAAGCCAGTAAGGTCCCATCTTCATGTCTAAACGTATTTCCTAGGTATTTATGGTCCCAGTGGGCTGATCTCAAGTCTTCTGGAATCCATTTCAGGTCCTCCATGCCAGTGGAAGTGCATTTGTGAGACTATTAGATGTTCTGTTTTGCCAGTTTTGAAATTTGATTCACACCTGGATCTAGTACAAGTTAGATCTTTCTTGGATGGTTATGAAACCTTTGCTCTAGGTTTTCGTGCTCTTATTCTCTTGAAGTTTGATTTGCGTTCTAAATATTGAATTGCATATCATCCTTGTGGTGTATTTCTTACAAGCCACCTATAGGAATGGATGATAATCTAATTCAAACATATGGTTCTGAATTGTTCACCTGATGTTCCTCTTACTTAATATACAATAAGGAACTTTTTCATTGAAAAAACTCTATTGAGAAAAATGTATGAATACATGAGGGTAATACAAATCATAGGCTGGGGTCGAGAAGAAATTTCTAGTTATTTTTTGATGTCGGGATGTCATCTACATGTGCATTCCCGTTCTCCGAAGTGAAAATAAAAGGTGGAAAACAAAGAAGTTGAGCTATGTTGACTATGGAGGTTGTTCTGGTTTATTTATTTATATTGTCTATTAGCACCCGGATGCACATCGATCTATAATGTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATCCTTTATAAGGGTGTGGAAATCTCTCCCCTAGCAGATGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGTGTAAAGAAGGCAATATCTGCTAGTGATGGGTTTGGGCCATTACATAATGTGACGATGGATTAAGCTGATCATATATCTTATCTTTATAAAAGAGCATACTAATCCCAGAATCAAATGAAATAAGATTATTTATTCAACAATCTAGTTTAAATAAGTGAGAGATAATTGTTTTCACTTGAATGACTTGTCAAAATTAATCATCTACTAAAATATCTGAGAGCTTTTTGATGAGATTAGCAGTAAGTACTAATAAGGGTAAAGCTTCCCCTTGTTGTGAACTCTTGTCTAGTAGTCGACTGAATTCATATAGCAGGCCAAAGCAATGCAACATGTGATGACACACGTTGTGCCTAATGGTACTGCAAGGCCCCAAATTACCCAAACATATGGTAGGAGGGGGGAAAAAGGGAAAGGAGGGTAATCTGACATGAGTAAGGGGGGTGTGAGCTCGTTGTTGTTGTATGGTAAGTCGGCGAGGGGAGTGTCGTTATTTTGGGATTTGAGTACATGTAAGCTCTTTTACGAGTTGTGTGGCTAAGGCTTTGGGTAGGAGATGCTCCCAGCTCTCTCGAAGTAGCTGGAGAAGTTTGTTTCCTGTTTGTGCATTTTCCTATTGTTTAGTTGCTTGTTGTAATCATTCGTTTCCGAGCCATTATCAATAGAACAGTGTCTCCCCCTGTTCCATCTCTGGTTTCTGGTGCATTTTGTGTTACTTAGCGTTATTGCAGGTTGTTGTTAGGGAGAGATTCCTTATAGGTACATGGTAATCTGTATATTTAGGCCAAGTTTGGAAGTAATTTAATGGTTTTTTTACCAAAAAAATGTGTGTTTTTGGCGCAAATGGTTAATCCAGAAGCACTTAAAAGTGATTTTAAGAGTGTATAACTAAACATCAAACTGATTTGTTATCGAGTACTCGGTTGTTTAGACACATACCTACACAAAATTTTTCGACGATGTTGTTTACCAAGCTTTATCTTGGCGTAAACTGTCTAATATTTTTATTTCCTATAGTTATACCTTCCTCGTTGCAAATTGGGAAAGTCTTTTGTGAACACATGGACCGTCCCTTTTGTAAATTTCAATCATCAATTATTGTCTCTTATTAAAAAAGAAAAAAAAAATCGAGTACACGACTAGTAAAGTGATTATAATTACAATACTTGACCCCCAAATGGGTATTGTATGTTGTTCACAGGAAATAATAACACCTCTAAATGGAGTTAGCAGACAAGACGGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGGTAAGTTCATCTTCCATGTTCATAGATGCTCTACCAAATGATTTCATTCGGTGTACTTGATCGTGTTACTGTCGGTTAAAGTATTGATATAACTAAATTTGTCTTAACTCGTCTACTCCAACTTTTAGATTGATGGGTGATTTAACCTGGTACTAGAGGGTTTCGTGTTTGAACTCATGTAATGTCATTCTTTTATTAATTAATATTAATTTCTACTCGTTGGATCGAGATTGTTAAAGTATTTGATATAATTAAATTTATGATAGCTCGTGAACTTAGGTGATTTTAATGTATTTTGCTTTGTTTAATGGCAGCCGTTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGATACTTCTTTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGA ATGGACAAGACGGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGATACTTCTTTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGA ATGGACAAGACGGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGATACTTCTTTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGA MDKTVGFLLSLTSLSIFTYYTFWVIILEFAILIPVFAGVILLCLLGIFVGIVMLKSKRKKA
BLAST of Cp4.1LG14g09860 vs. TrEMBL
Match: A0A0A0L3V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008860 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.6e-16 Identity = 55/76 (72.37%), Postives = 59/76 (77.63%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. TrEMBL
Match: W9RBD6_9ROSA (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Morus notabilis GN=L484_017751 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 5.4e-14 Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. TrEMBL
Match: B9MU62_POPTR (Dolichol phosphate-mannose biosynthesis regulatory family protein OS=Populus trichocarpa GN=POPTR_0001s02060g PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 2.7e-13 Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. TrEMBL
Match: A0A0D2R726_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G182800 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 6.0e-13 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. TrEMBL
Match: A0A0B0NSY7_GOSAR (Dolichol phosphate-mannose biosynthesis regulatory OS=Gossypium arboreum GN=F383_20657 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-12 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. TAIR10
Match: AT1G74340.1 (AT1G74340.1 dolichol phosphate-mannose biosynthesis regulatory protein-related) HSP 1 Score: 72.0 bits (175), Expect = 1.4e-13 Identity = 44/76 (57.89%), Postives = 52/76 (68.42%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. NCBI nr
Match: gi|449462047|ref|XP_004148753.1| (PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 3.8e-16 Identity = 55/76 (72.37%), Postives = 59/76 (77.63%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. NCBI nr
Match: gi|659095576|ref|XP_008448655.1| (PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis melo]) HSP 1 Score: 92.0 bits (227), Expect = 3.8e-16 Identity = 55/76 (72.37%), Postives = 59/76 (77.63%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. NCBI nr
Match: gi|703100504|ref|XP_010096937.1| (Dolichol phosphate-mannose biosynthesis regulatory protein [Morus notabilis]) HSP 1 Score: 84.3 bits (207), Expect = 7.8e-14 Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. NCBI nr
Match: gi|566146711|ref|XP_006368363.1| (dolichol phosphate-mannose biosynthesis regulatory family protein [Populus trichocarpa]) HSP 1 Score: 82.0 bits (201), Expect = 3.9e-13 Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 1
BLAST of Cp4.1LG14g09860 vs. NCBI nr
Match: gi|823151668|ref|XP_012475661.1| (PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Gossypium raimondii]) HSP 1 Score: 80.9 bits (198), Expect = 8.6e-13 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |