CmaCh16G011790 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G011790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Dolichol phosphate-mannose biosynthesis regulatory protein
Location	Cma_Chr16 : 9019162 .. 9022394 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCACATGGGTTATCGAATTTAGCTTCCAAATAGGATCATTCTTCGGAAAAACCTTTCCAGATTCTGTTTCATTCCTTGATCCTTCCAACATTTTCCGGCGACGAAGAATCAGGTATGAGCTTTATACCATGCTATCTGTATCACGTCGATTAACTCTTGCTGCTAAAATTTCGACGATCTTTGATCTTGGTTTCGATTTTTATTGCGCGAATTCCTTGATTTCATTTGAAAAAATGAGCTCTACAAATATTGTTCTGTATTTAGAGGAATTGAATTGATTTTTTAAGGTGGTAGTATGATTAGCTTGATCGATATTGGCTGCATCTGTTTACTATATCTCCAGCACCATTAGATTCAATTTCTTCACATTGCTCTTTTTTCCCTTAGAAGTGTTGAAGATTAGCAGGACTATTCGTGAAAACAAAAATTACAGAAGAAATAACAGGGACAAAAAAAAAACAAAAACCTACAATGTTCAAGTTATGGTATGAAGATTGTTTTTGATTAGATTGCTTCATGACACCATACGCAATGGGCATTTTTGGTTCTAGAATTTAGCAGTTTTCTGTAAGACACAGATGGTATTGGCTATTGGATACTTCTCCTTCATTATCTAGGTCTAGTTTGATAACCATTTGGTTTTTGTTTTTAGATTTTTTAGTGTTGTGTTTGTTTTATCCCTATTTGTTTGTAACAATTTTCATGGAAAGATTTGAATTCTTAGCCAAATTCCAAAAACGAAAACATTTTTTAAAACTACTTTTTTAAGCAAAATTCTATTGTTCTGTTTCAAAATTCAAGTGTCATATTTTGAAGCAGTCTCTTACTTTATAATTAGGACCCTCCTCTTCTACCCTTTAAGGTTTTATATTTTTCTTCTTCTTTCCTATATCCCCTTTGCAAGCCAATAAGGTCTCATCTTCATGTCTAACGTATTTCCTAAGTATTTATGGTCCCAGTGGGCTGATCCCAAGTCTTTTGGAATCCATTTCAGGTCCTCCATGCCAGTGGAAGTGCATTTGTGAGACTATTAGATGTTCTGTTTTGCCAGTTTTGAAATTTGATTCACACCTGGATCTAGTACAAGTTAGATCTTTCTTGGATGGTTATGAAACATTTGCTCTAGGTTTTCGTGCTCTTATTCTCTTGAAGTTTGATTTCCATTCTAAATATTGAATTGCATATCATCCTTGTAGTGTATTTCTTACAATCCACCTATAGGAATGGAAGACTAAGAATCAATGGTAATCTAATTCAAACATATGGGTCTGAATTGTTCACCTGATGTTCCCCTTACTTAATATACAATAAGGAACTTTTTCATTGAAAAAACTCCTTCATTGAGAAAAATGTATGAATACATGAGGATAATACGAATCATAGGCTGGGGTCTAGAAGAAATTTCTAGTTATTTTTTGATGTCGGGATGTCATCTACAAGTGCATTCCCGTTCTCCGAAGTGAAAATAAAAGGTGGAAAACAAAGAAGTTGAGCGATGTTGATGAAGGAGTTTGTTCTGGTTTATTTATTTATATTGTCTATTAGCACCAGGATGCATATCGATCTATAATGTGTGAGATCCCACATCGGTTGTGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCTTTTAAAAATCTTGAGGGGAAGCCCGAAAGGAAAAGTCTAAAGAGGACAATATATGCTAACGGTGAGCTTGGACCATTACATAATGTCACGATGGATTAGGCTGATCGTATATCTTATCTTTATAAAAGATGATACTAATCCCAGAATAAAATGAAATAAGATTATTTATTCAACAATCTAGTTAAATAAGTGAGAGAATTGTTTTTACTTGAATGACTTGTCAAAATTAATCATCTACTAAAATATCTGAGAGCTTTTTGATGAGATTAGCAGTCAGTACTAATAAGAGCACGGCTTCCCCTTGTTGTGAACTCTTGTCTAGCAGTCGACTGAATTCTTATATAACAGGCCAAAGCAATGCAACATGTGATGACACACGTTGTGCCTAATGGTACTGCAAGGCCCCAAATTACCCAAACATATGGTAGGAGGGGGGAAAAAGGGAAAGGAGGGTAATCTGACATGAGTAAGGGGGGTGTGAGCTCGTTGTTGTTGTATGGCAATTCGGCAAGGGGAGTGTCGTTATTTTGGGATTTGAGTACATGTAGGTTTTTTTATGAATTATGTGGCTAAGGCTTTGGGAAGGAGATGCTCCCAGCTCTCTCAAAGTAGCTGGAGAAGGTTGTTTGCTGTTCGGGTAGTTTCCTATTGTTTAATCGCTTGTAATCATTCGTTTCCGAGCCATTATCAATAGAACAGTGTCTCCCCCTGTTCCATCTCTGGTTTCTGGTGCATTTTGTGTTACTTAGCGTTATTGCAGGTTGTTGTTAGGGAGAGATTCCTTATAGGTACATGGTAATCTGTATATTTAGGCTAGGTTGGGAAGTAATTTAATGTGCTTTTGACCTCAAAAAAGTGTGTTTTTGGCGCAAATGGTTAATCCATTACAATACTTGACACCCAAATGGGTATTGTATGTTGTTCACAGGAAATAATAACACCTCTAAATGGAGTTAGCAGACAAGACGGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTGCTGTACTTTCTGGGTCATTATCCTGGTAAGTTCATCTTCCATGTTCTAGATGCTCTACCAAATGATTTCGTTCGATGTACTTGATCGCGTTACTGTCAGTTAAAGTATTGATATAATTAAACTTGTCTTAACTCATTTACTTCAACTTTTAGATTGATGGGTGATTTAACCTAGTACTAGAGCGTCTCGTGTTTGAACTCCTATAATGTCATTTTTTTATTAATTAATATTAATTTCTACTTGTTGGATCTTCAACAAATTTTCAAGTGCGTGAGCGAGAGCGAGAGTGAGATTGTTGAAGTATTTGATATAATTAAATTTATCATAGCTCGTGTATTTTAATGTATTTTGCTTTGTTTTAATGGCAGCCATTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGTTTATTAGGCATATTTGTTGGAATTGTAATGCTCAAATCCAAAAGGAAGAAGGCATGAGGACAACTCTTAAAAGCTAGCTTTAACTATGTAAATATAATGTGGT

mRNA sequence

TTTCTCACATGGGTTATCGAATTTAGCTTCCAAATAGGATCATTCTTCGGAAAAACCTTTCCAGATTCTGTTTCATTCCTTGATCCTTCCAACATTTTCCGGCGACGAAGAATCAGGTCCTCCATGCCAGTGGAAGTGCATTTGTGAGACTATTAGATGTTCTGTTTTGCCAGTTTTGAAATTTGATTCACACCTGGATCTAGTACAAGTTAGATCTTTCTTGGATGGTTATGAAACATTTGCTCTAGGAAATAATAACACCTCTAAATGGAGTTAGCAGACAAGACGGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTGCTGTACTTTCTGGGTCATTATCCTGCCATTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGTTTATTAGGCATATTTGTTGGAATTGTAATGCTCAAATCCAAAAGGAAGAAGGCATGAGGACAACTCTTAAAAGCTAGCTTTAACTATGTAAATATAATGTGGT

Coding sequence (CDS)

ATGGAGTTAGCAGACAAGACGGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTGCTGTACTTTCTGGGTCATTATCCTGCCATTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGTTTATTAGGCATATTTGTTGGAATTGTAATGCTCAAATCCAAAAGGAAGAAGGCATGA

Protein sequence

MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLLGIFVGIVMLKSKRKKA

Homology

[Close]

BLAST of CmaCh16G011790 vs. Swiss-Prot
Match: DPM2_CRIGR (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus GN=DPM2 PE=3 SV=3)

HSP 1 Score: 80.9 bits (198), Expect = 7.1e-15
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 1


Query: 5  DKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VGF L   SL IFT  T WVI+LPF+DS H IH YFLP+ +A+LIP+  G++LL  +
Sbjct: 6  DQVVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLIPLATGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  VMLKS+R  KKA
Sbjct: 66 GLFITYVMLKSRRLTKKA 83

[Close]

BLAST of CmaCh16G011790 vs. Swiss-Prot
Match: DPM2_MOUSE (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus GN=Dpm2 PE=3 SV=3)

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-14
Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1


Query: 5  DKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VGF L   SL IFT  T WVI+LPF+DS H IH YFLP+ +A+L+P+ AG++LL  +
Sbjct: 6  DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  VMLKS++  KKA
Sbjct: 66 GLFITYVMLKSQKITKKA 83

[Close]

BLAST of CmaCh16G011790 vs. Swiss-Prot
Match: DPM2_HUMAN (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens GN=DPM2 PE=1 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 2.7e-14
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 1


Query: 5  DKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VG  L   SL IFT  T WVI+LPF+DS H IH YFLP+ +A+ IP+ AG++LL  +
Sbjct: 6  DQVVGLGLVAVSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAVAIPLAAGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  VMLK+KR  KKA
Sbjct: 66 GLFISYVMLKTKRVTKKA 83

[Close]

BLAST of CmaCh16G011790 vs. Swiss-Prot
Match: DPM2_RAT (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus GN=Dpm2 PE=1 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 2.7e-14
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1


Query: 5  DKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VGF L   SL IFT  T WVI+LPF+DS H IH YFLP+ +A+L+P+ AG++LL  +
Sbjct: 6  DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  V+LKS++  KKA
Sbjct: 66 GLFITYVLLKSQKVTKKA 83

[Close]

BLAST of CmaCh16G011790 vs. Swiss-Prot
Match: DPM2_BOVIN (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Bos taurus GN=DPM2 PE=3 SV=3)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 1


Query: 5  DKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VG  L   SL IFT  T WVI+LPF+DS H IH YFLP+ +AI IP+ AG +LL  +
Sbjct: 6  DQVVGLGLVALSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAIAIPLAAGHLLLLFV 65

Query: 65 GIFVGIVMLKSK 77
          GIF+  VMLK++
Sbjct: 66 GIFITYVMLKNQ 77

[Close]

BLAST of CmaCh16G011790 vs. TrEMBL
Match: A0A0A0L3V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008860 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-30
Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFT  TFWV+ILPFVDSDHFIH+YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVG VMLKSK+KKA
Sbjct: 61 LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. TrEMBL
Match: B9MU62_POPTR (Dolichol phosphate-mannose biosynthesis regulatory family protein OS=Populus trichocarpa GN=POPTR_0001s02060g PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-27
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VGFLLSLTS+SIFT  TFWVIILPFVDSDHF+H YFLPQE+AIL+PVFAG+VL
Sbjct: 1  MELADRAVGFLLSLTSISIFTYYTFWVIILPFVDSDHFVHQYFLPQEYAILVPVFAGMVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LC L +FVG VMLKSK+KKA
Sbjct: 61 LCFLCVFVGFVMLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. TrEMBL
Match: W9RBD6_9ROSA (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Morus notabilis GN=L484_017751 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.5e-27
Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VGFLLSL SLSIFT  TFWVIILPFVDSDHFI  YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADRAVGFLLSLISLSIFTYYTFWVIILPFVDSDHFIQQYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLL +FVG+VMLKSK+KKA
Sbjct: 61 LCLLCVFVGLVMLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. TrEMBL
Match: A0A059CID9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02219 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 9.6e-27
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 1


Query: 1   MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
           MELAD+ VGFLL+L SLSIFT  TFWVIILPFVDSDHF+H YFLPQE+AILIPVFAGVVL
Sbjct: 103 MELADRAVGFLLTLVSLSIFTYYTFWVIILPFVDSDHFVHQYFLPQEYAILIPVFAGVVL 162

Query: 61  LCLLGIFVGIVMLKSKRKKA 81
           LC L +F+G+VMLK K+KKA
Sbjct: 163 LCFLCVFIGLVMLKPKKKKA 182

[Close]

BLAST of CmaCh16G011790 vs. TrEMBL
Match: A0A0D2R726_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G182800 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-26
Identity = 66/80 (82.50%), Postives = 74/80 (92.50%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VGFLLS+TSLSIFT  TFWVIILPFVDSD+FIH+YFLPQE+AILIPV AGVVL
Sbjct: 1  MELADRAVGFLLSITSLSIFTYYTFWVIILPFVDSDNFIHNYFLPQEYAILIPVCAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLL IF+G V+LKSK+KKA
Sbjct: 61 LCLLCIFIGFVLLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. TAIR10
Match: AT1G74340.1 (AT1G74340.1 dolichol phosphate-mannose biosynthesis regulatory protein-related)

HSP 1 Score: 119.8 bits (299), Expect = 7.8e-28
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VG LLS  SLSIFT  TFWVIILPFVDSDHFIH YFLPQ++AIL+PVFAG+ L
Sbjct: 1  MELADRAVGLLLSSISLSIFTYYTFWVIILPFVDSDHFIHKYFLPQDYAILVPVFAGIAL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          L L+ +F+G+VMLKSK+KKA
Sbjct: 61 LSLISVFIGMVMLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. NCBI nr
Match: gi|449462047|ref|XP_004148753.1| (PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-30
Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFT  TFWV+ILPFVDSDHFIH+YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVG VMLKSK+KKA
Sbjct: 61 LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. NCBI nr
Match: gi|659095576|ref|XP_008448655.1| (PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-30
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 1


Query: 1   MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
           MELADKTVGFLLSLTSLSIFT  TFWV+ILPFVDSDHF+H+YFLPQE+AILIPVFAGVVL
Sbjct: 50  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFVHNYFLPQEYAILIPVFAGVVL 109

Query: 61  LCLLGIFVGIVMLKSKRKKA 81
           LCLLGIFVG VMLKSK+KKA
Sbjct: 110 LCLLGIFVGTVMLKSKKKKA 129

[Close]

BLAST of CmaCh16G011790 vs. NCBI nr
Match: gi|566146711|ref|XP_006368363.1| (dolichol phosphate-mannose biosynthesis regulatory family protein [Populus trichocarpa])

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-27
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VGFLLSLTS+SIFT  TFWVIILPFVDSDHF+H YFLPQE+AIL+PVFAG+VL
Sbjct: 1  MELADRAVGFLLSLTSISIFTYYTFWVIILPFVDSDHFVHQYFLPQEYAILVPVFAGMVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LC L +FVG VMLKSK+KKA
Sbjct: 61 LCFLCVFVGFVMLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. NCBI nr
Match: gi|703100504|ref|XP_010096937.1| (Dolichol phosphate-mannose biosynthesis regulatory protein [Morus notabilis])

HSP 1 Score: 129.0 bits (323), Expect = 3.6e-27
Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 1  MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VGFLLSL SLSIFT  TFWVIILPFVDSDHFI  YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADRAVGFLLSLISLSIFTYYTFWVIILPFVDSDHFIQQYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLL +FVG+VMLKSK+KKA
Sbjct: 61 LCLLCVFVGLVMLKSKKKKA 80

[Close]

BLAST of CmaCh16G011790 vs. NCBI nr
Match: gi|629113014|gb|KCW77974.1| (hypothetical protein EUGRSUZ_D02219 [Eucalyptus grandis])

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-26
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 1


Query: 1   MELADKTVGFLLSLTSLSIFTCCTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
           MELAD+ VGFLL+L SLSIFT  TFWVIILPFVDSDHF+H YFLPQE+AILIPVFAGVVL
Sbjct: 103 MELADRAVGFLLTLVSLSIFTYYTFWVIILPFVDSDHFVHQYFLPQEYAILIPVFAGVVL 162

Query: 61  LCLLGIFVGIVMLKSKRKKA 81
           LC L +F+G+VMLK K+KKA
Sbjct: 163 LCFLCVFIGLVMLKPKKKKA 182

The following BLAST results are available for this feature:

BLAST of CmaCh16G011790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPM2_CRIGR	7.1e-15	56.41	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus...	[more]
DPM2_MOUSE	1.2e-14	55.13	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus GN=Dp...	[more]
DPM2_HUMAN	2.7e-14	55.13	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens GN=DP...	[more]
DPM2_RAT	2.7e-14	53.85	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus ...	[more]
DPM2_BOVIN	1.5e-12	55.56	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Bos taurus GN=DPM2...	[more]

BLAST of CmaCh16G011790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3V9_CUCSA	1.1e-30	91.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008860 PE=4 SV=1	[more]
B9MU62_POPTR	1.9e-27	81.25	Dolichol phosphate-mannose biosynthesis regulatory family protein OS=Populus tri...	[more]
W9RBD6_9ROSA	2.5e-27	85.00	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Morus notabilis GN...	[more]
A0A059CID9_EUCGR	9.6e-27	80.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02219 PE=4 SV=1	[more]
A0A0D2R726_GOSRA	1.6e-26	82.50	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G182800 PE=4 SV=1	[more]

BLAST of CmaCh16G011790 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74340.1	7.8e-28	75.00	dolichol phosphate-mannose biosynthesis regulatory protein-related	[more]

BLAST of CmaCh16G011790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462047\|ref\|XP_004148753.1\|	1.6e-30	91.25	PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis s...	[more]
gi\|659095576\|ref\|XP_008448655.1\|	2.1e-30	90.00	PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis m...	[more]
gi\|566146711\|ref\|XP_006368363.1\|	2.8e-27	81.25	dolichol phosphate-mannose biosynthesis regulatory family protein [Populus trich...	[more]
gi\|703100504\|ref\|XP_010096937.1\|	3.6e-27	85.00	Dolichol phosphate-mannose biosynthesis regulatory protein [Morus notabilis]	[more]
gi\|629113014\|gb\|KCW77974.1\|	1.4e-26	80.00	hypothetical protein EUGRSUZ_D02219 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009914	DPM2

Vocabulary: **Biological Process**
Term	Definition
GO:0019348	dolichol metabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0030176	integral component of endoplasmic reticulum membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0030234	enzyme regulator activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019348	dolichol metabolic process
biological_process	GO:0009059	macromolecule biosynthetic process
biological_process	GO:0006506	GPI anchor biosynthetic process
biological_process	GO:0035269	protein O-linked mannosylation
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0033185	dolichol-phosphate-mannose synthase complex
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
molecular_function	GO:0030234	enzyme regulator activity
molecular_function	GO:0004582	dolichyl-phosphate beta-D-mannosyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G011790.1	CmaCh16G011790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009914	Dolichol phosphate-mannose biosynthesis regulatory	PFAM	PF07297	DPM2	coord: 4..79 score: 2.7
None	No IPR available	PANTHER	PTHR15039	FAMILY NOT NAMED	coord: 1..80 score: 4.0
None	No IPR available	PANTHER	PTHR15039:SF11	DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN	coord: 1..80 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G011790	Cucsa.322010	Cucumber (Gy14) v1	cgycmaB0887
CmaCh16G011790	Cla008829	Watermelon (97103) v1	cmawmB292
CmaCh16G011790	Csa3G008860	Cucumber (Chinese Long) v2	cmacuB326
CmaCh16G011790	MELO3C013830	Melon (DHL92) v3.5.1	cmameB291
CmaCh16G011790	ClCG10G001370	Watermelon (Charleston Gray)	cmawcgB284
CmaCh16G011790	CmoCh06G006410	Cucurbita moschata (Rifu)	cmacmoB344
CmaCh16G011790	CmoCh16G012290	Cucurbita moschata (Rifu)	cmacmoB323
CmaCh16G011790	Cp4.1LG14g09860	Cucurbita pepo (Zucchini)	cmacpeB345
CmaCh16G011790	Cp4.1LG08g08670	Cucurbita pepo (Zucchini)	cmacpeB363
CmaCh16G011790	MELO3C013830.2	Melon (DHL92) v3.6.1	cmamedB342
CmaCh16G011790	CsaV3_3G001440	Cucumber (Chinese Long) v3	cmacucB0380
CmaCh16G011790	Cla97C10G185980	Watermelon (97103) v2	cmawmbB337
CmaCh16G011790	CsGy3G001310	Cucumber (Gy14) v2	cgybcmaB339
CmaCh16G011790	Carg23597	Silver-seed gourd	carcmaB1453
CmaCh16G011790	Carg23396	Silver-seed gourd	carcmaB1329

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G011790	Cucurbita maxima (Rimu)	cmacmaB343
CmaCh16G011790	Cucurbita maxima (Rimu)	cmacmaB344
CmaCh16G011790	Cucurbita maxima (Rimu)	cmacmaB357
CmaCh16G011790	Cucumber (Gy14) v1	cgycmaB0862
CmaCh16G011790	Cucurbita moschata (Rifu)	cmacmoB331
CmaCh16G011790	Cucurbita moschata (Rifu)	cmacmoB332
CmaCh16G011790	Wild cucumber (PI 183967)	cmacpiB332
CmaCh16G011790	Wild cucumber (PI 183967)	cmacpiB336
CmaCh16G011790	Cucumber (Chinese Long) v2	cmacuB330
CmaCh16G011790	Melon (DHL92) v3.5.1	cmameB288
CmaCh16G011790	Watermelon (Charleston Gray)	cmawcgB279
CmaCh16G011790	Watermelon (97103) v1	cmawmB291
CmaCh16G011790	Cucurbita pepo (Zucchini)	cmacpeB349
CmaCh16G011790	Cucurbita pepo (Zucchini)	cmacpeB360
CmaCh16G011790	Bottle gourd (USVL1VR-Ls)	cmalsiB297
CmaCh16G011790	Bottle gourd (USVL1VR-Ls)	cmalsiB324
CmaCh16G011790	Cucumber (Gy14) v2	cgybcmaB344
CmaCh16G011790	Melon (DHL92) v3.6.1	cmamedB333
CmaCh16G011790	Silver-seed gourd	carcmaB1077
CmaCh16G011790	Cucumber (Chinese Long) v3	cmacucB0385
CmaCh16G011790	Watermelon (97103) v2	cmawmbB357
CmaCh16G011790	Wax gourd	cmawgoB0424
CmaCh16G011790	Wax gourd	cmawgoB0444