Carg23597 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23597
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	dolichol phosphate-mannose biosynthesis regulatory protein
Location	Cucurbita_argyrosperma_scaffold_235 : 248593 .. 251890 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCAGATTCTGTCTCATTCCTTAATCCTTCCAACATTTTCCGGCGACGAAGAATCGGGTATGAGCTTTATACCATGCTAATCTGTATCACGTCGATTAACTCTTGCTGCTAAAATTTCGACGATCTTTGATCTTGGTTTCGATTTTTATTGCGCGAATTCCTTGATTTCATTTGAAAAAATGAGCTCTGCAAATATTAATCTGTGTTTAGAGGAACTGAATTGAATTTTTAAGGTGGTACTATGATTAGCTTGATCGATGTTGGCTGCATCTGTTTGCTATATCTCCAGCACCATTAGATTCAATTTCTTTACATTGCTCTTTTTTCCCTTAGAAGTGTTGAAGATTAGCAGGACTATTCGTGAAAACAAAAATTACAGAAGAAATAACAGGGAAAAAAAGAACAAAAACCTACAATGTTCAAGTTATGGTATGAAGATTGTTTGTGATTAGATTGCTTCATGATACCATATACGCAATGTGCATTTTTGGTTCTAATTTAGTAATTGTCTGCAAGACACAGACGGTATTGGCTATTGAATACTTCTCCTTCATTGTTTAGGTCTAGTTTGATAACCATTTGGTTTTTGTTTTTAGATTTCTTAGCGTTGTGTTTGTTTTCTCCCTATTTTTTGTAACAATTTTCATGGAAAGATTTGAATTCTTAGCCAAATTCCAAAAACGAAAACATTTTTTAAAACTACTGTTTTTTTTAAGCAAAATTCTATCGTTCTGTTTCAAAATTCAAACGTCGTATTTCGAAGCAGTCTCTTACTTTATAATTAGGACCCACCTCTTCTACCTTTTAAGGTTTTAGATTTTGCTTCTTCTTTTCTATATCCCCTTTGCAAGCCAATAAGGTCCCATCTTCATGTCTAAACGTATTTCGTAGGTATTTATGGTCCCAGTGTGCTGATCTCAAGTCTTCTGGAATCCATTTCAGGTCCTCCATGCCAGTGGAAGTGCATTTGTGAGACTATTAGATGTTCTGTTTTGCCAGTTTTGAAATTTGATTCACACCTGGATCTAGTACAAGTTAGATCTTTCTTGGATGGTTATGAAACCTTTGCTCTAGGTTTTCGTGCTCTTATTCTCTTGAAGTTTGATTTGCGTTCTAAATATTGAATTGCATGTCATCCTTGTGGTGTATTTCTTACAATCCACCTATAGGAATGGAAGACTAAGAATCAATAATAATCTAATTCAAACATATGGTTCTGAATTGTTCACCTGATGTTCCTCTTACTTAATATACAATAAGGAACTTTTTCATTGAAAAAACTCCTTCATTGAGAAAAATGTACACATGAGGGTAATACAAATCATAGGCTGGGGTCTAGAAGAAAGTTCTAGTTATTTTTTGATGTCTGGATGTCATCTACATGTGCATTCCCGTATGTTGATGACGGAGTTTGTTCTGGTTTATTTATTTATTATTGTCTATTAGCACCAGGATGCACATCGATCTATAATGTGTGAGATCCCACATCGGTTAGGGAGGAGAACGAAACATCCTTTATAAGGGAGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAATCTTGAGGGGAAGTCCCGAAAGGAAAAGTCTAAAGAGAATAATATATACTAGCGGTGGGCTTGGACCATTACATAATATCATGATGGATTAGGCTGATCGTATATCTTATCTTTATGAAAGATCATACTAATCCCAGAATCAAATGAAATAAGATTATTTACTTAACAATCTAGTTTAAATACGTGAGAGACACTTGACTTGAATGACTTGTCAAAATTAATGATCTACTAAAATATCTGAGAGCTTTTTGATGAGATTGGCAGTAAGTACTAATAAGGGTAAAGCTTTCCCCTTGTTGTGAACTCTTGTCTAGTAGTCGACTGAATTCATATAGCAGGCCAAAGCAATGCAACATGGGATGACACACGTTGTGCCTAATGGTACTGCAAGGCCCCAAATTACTCAAACATATGGTAGGAGGGGGGAAAAAGGGAAAGGAGGGTAATCAGACATGAGTAAGGGGGGTGTGAGCGCGTTGTTGTTGTACGGCAAGTCAGCAAGGGGAGTGTCGTTATTCTGGGATTTGAGTACATGTAAGCTCTTTTACGAGTTGTGTGGCTAAGGCTTTGAGTAGGAGATGCTCCCAGCTCTCTCGAAGTAGCTGGAGAAGTTTGTTTCCTGTTTGTGTATTTTCCTATTGTTTAGTTCCTTGTAATCATTCGTCTTCCGAGCCATTATCAATAGAACAGTGTCTCCCCCTGTTCCATCACTGGTTTCTGGTGCATTTTGTGTTACTTAGCGTTATTGCAGGTTGTTGTTAGGGAGAGATTCCTTATAGGTACATGGTAATCTGTATATTTAGGCTAAGTTTGGAAGTAATTTAATGGTTTTTTTACCAAAAAAATGCGTGTTTTTGGCGCAAATGGTTAATCCAGAAGCACTTAAAAGTGATTTTAAGAGAGTAAAACTAAATATCAAACTGATTTGTTATTGAATACTCGGTAGTAAAGTGCTTATAATTACAATACTTGACACCCAAATGGGTATCGTATGTTGTTCACAGGAAATAATAACACCTCTAAATGGAGTTAGCAGACAAGACTGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGGTAAGTTCATCTTCCATGTTCATAGATGCTCTACCAAATGATTTCATTCGATGTACTTGATCGTGTTACTGCCGGTTAAAGTATTGATATAATTAAACTTGTCTTAACTCGTCTACTTCAAGATTGATGGGTGATTTAACCTGGTACTAGAGCGTTTCGTGAACTTCTGTAATGTCATTCTTTTTATAAATTAATATTAATTTCTACTCGTTGGATCTTCAACAAATTTTCAAACGTGCGTGCGAGAAGGAGATTGTTAGAGTATTTGATATAATTAAATTTATCATAGCTCGTGAACTTAAATTGTATTTTGCTTTGTTTAATGGCAGCCGTTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGAGGACAACTCTTTGGCTGTTCGTTTTTTTTTTTGTTTTTTTTATTCTAATGGGTCGGAGATCAAACCATTGACTTTTGTATGTTTATCCACTAAATTACGTTAAAAGCTAGCTATGTAAATATAATGTGGTTTTTTTTTTTTT

mRNA sequence

TTCCAGATTCTGTCTCATTCCTTAATCCTTCCAACATTTTCCGGCGACGAAGAATCGGGAAATAATAACACCTCTAAATGGAGTTAGCAGACAAGACTGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGCCGTTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGAGGACAACTCTTTGGCTGTTCGTTTTTTTTTTTGTTTTTTTTATTCTAATGGGTCGGAGATCAAACCATTGACTTTTGTATGTTTATCCACTAAATTACGTTAAAAGCTAGCTATGTAAATATAATGTGGTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGAGTTAGCAGACAAGACTGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGCCGTTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGA

Protein sequence

MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLLGIFVGIVMLKSKRKKA

Homology

[Close]

BLAST of Carg23597 vs. NCBI nr
Match: XP_022923351.1 (dolichol-phosphate mannose synthase subunit 2-like [Cucurbita moschata] >XP_022923352.1 dolichol-phosphate mannose synthase subunit 2-like [Cucurbita moschata])

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVGIVMLKSKRKKA
Sbjct: 61 LCLLGIFVGIVMLKSKRKKA 80

[Close]

BLAST of Carg23597 vs. NCBI nr
Match: XP_023552505.1 (dolichol-phosphate mannose synthase subunit 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGV+L
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVIL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVGIVMLKSKRKKA
Sbjct: 61 LCLLGIFVGIVMLKSKRKKA 80

[Close]

BLAST of Carg23597 vs. NCBI nr
Match: XP_004148753.1 (PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis sativus] >KGN55729.1 hypothetical protein Csa_3G008860 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 5.6e-32
Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFTYYTFWV+ILPFVDSDHFIH+YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVG VMLKSK+KKA
Sbjct: 61 LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. NCBI nr
Match: XP_023540556.1 (dolichol-phosphate mannose synthase subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.0 bits (367), Expect = 5.6e-32
Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIH+YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLL IFVGIVMLKSK+KKA
Sbjct: 61 LCLLAIFVGIVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. NCBI nr
Match: XP_008448655.2 (PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-32
Identity = 74/80 (92.50%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFTYYTFWV+ILPFVDSDHF+H+YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFVHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVG VMLKSK+KKA
Sbjct: 61 LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. TAIR10
Match: AT1G74340.1 (dolichol phosphate-mannose biosynthesis regulatory protein-related)

HSP 1 Score: 125.6 bits (314), Expect = 1.4e-29
Identity = 62/80 (77.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VG LLS  SLSIFTYYTFWVIILPFVDSDHFIH YFLPQ++AIL+PVFAG+ L
Sbjct: 1  MELADRAVGLLLSSISLSIFTYYTFWVIILPFVDSDHFIHKYFLPQDYAILVPVFAGIAL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          L L+ +F+G+VMLKSK+KKA
Sbjct: 61 LSLISVFIGMVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. Swiss-Prot
Match: sp|Q9CA79|DPM2_ARATH (Dolichol-phosphate mannose synthase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=DPMS2 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.6e-28
Identity = 62/80 (77.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VG LLS  SLSIFTYYTFWVIILPFVDSDHFIH YFLPQ++AIL+PVFAG+ L
Sbjct: 1  MELADRAVGLLLSSISLSIFTYYTFWVIILPFVDSDHFIHKYFLPQDYAILVPVFAGIAL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          L L+ +F+G+VMLKSK+KKA
Sbjct: 61 LSLISVFIGMVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. Swiss-Prot
Match: sp|Q9Z1P1|DPM2_CRIGR (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus OX=10029 GN=DPM2 PE=3 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-16
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 5  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VGF L   SL IFTYYT WVI+LPF+DS H IH YFLP+ +A+LIP+  G++LL  +
Sbjct: 6  DQVVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLIPLATGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  VMLKS+R  KKA
Sbjct: 66 GLFITYVMLKSRRLTKKA 83

[Close]

BLAST of Carg23597 vs. Swiss-Prot
Match: sp|Q9Z324|DPM2_MOUSE (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus OX=10090 GN=Dpm2 PE=3 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 5  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VGF L   SL IFTYYT WVI+LPF+DS H IH YFLP+ +A+L+P+ AG++LL  +
Sbjct: 6  DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  VMLKS++  KKA
Sbjct: 66 GLFITYVMLKSQKITKKA 83

[Close]

BLAST of Carg23597 vs. Swiss-Prot
Match: sp|O94777|DPM2_HUMAN (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens OX=9606 GN=DPM2 PE=1 SV=3)

HSP 1 Score: 84.7 bits (208), Expect = 5.0e-16
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 5  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VG  L   SL IFTYYT WVI+LPF+DS H IH YFLP+ +A+ IP+ AG++LL  +
Sbjct: 6  DQVVGLGLVAVSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAVAIPLAAGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  VMLK+KR  KKA
Sbjct: 66 GLFISYVMLKTKRVTKKA 83

[Close]

BLAST of Carg23597 vs. Swiss-Prot
Match: sp|Q9Z325|DPM2_RAT (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus OX=10116 GN=Dpm2 PE=1 SV=3)

HSP 1 Score: 84.7 bits (208), Expect = 5.0e-16
Identity = 44/78 (56.41%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 5  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLL 64
          D+ VGF L   SL IFTYYT WVI+LPF+DS H IH YFLP+ +A+L+P+ AG++LL  +
Sbjct: 6  DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 65 GIFVGIVMLKSKR--KKA 81
          G+F+  V+LKS++  KKA
Sbjct: 66 GLFITYVLLKSQKVTKKA 83

[Close]

BLAST of Carg23597 vs. TrEMBL
Match: tr|A0A0A0L3V9|A0A0A0L3V9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008860 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.7e-32
Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFTYYTFWV+ILPFVDSDHFIH+YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVG VMLKSK+KKA
Sbjct: 61 LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. TrEMBL
Match: tr|A0A1S3BL34|A0A1S3BL34_CUCME (dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis melo OX=3656 GN=LOC103490758 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-32
Identity = 74/80 (92.50%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELADKTVGFLLSLTSLSIFTYYTFWV+ILPFVDSDHF+H+YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFVHNYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLLGIFVG VMLKSK+KKA
Sbjct: 61 LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. TrEMBL
Match: tr|B9MU62|B9MU62_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G138100v3 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-29
Identity = 67/80 (83.75%), Postives = 75/80 (93.75%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VGFLLSLTS+SIFTYYTFWVIILPFVDSDHF+H YFLPQE+AIL+PVFAG+VL
Sbjct: 1  MELADRAVGFLLSLTSISIFTYYTFWVIILPFVDSDHFVHQYFLPQEYAILVPVFAGMVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LC L +FVG VMLKSK+KKA
Sbjct: 61 LCFLCVFVGFVMLKSKKKKA 80

[Close]

BLAST of Carg23597 vs. TrEMBL
Match: tr|A0A2K2BX66|A0A2K2BX66_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_001G138100v3 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-29
Identity = 67/80 (83.75%), Postives = 75/80 (93.75%), Query Frame = 0


Query: 1   MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
           MELAD+ VGFLLSLTS+SIFTYYTFWVIILPFVDSDHF+H YFLPQE+AIL+PVFAG+VL
Sbjct: 40  MELADRAVGFLLSLTSISIFTYYTFWVIILPFVDSDHFVHQYFLPQEYAILVPVFAGMVL 99

Query: 61  LCLLGIFVGIVMLKSKRKKA 81
           LC L +FVG VMLKSK+KKA
Sbjct: 100 LCFLCVFVGFVMLKSKKKKA 119

[Close]

BLAST of Carg23597 vs. TrEMBL
Match: tr|W9RBD6|W9RBD6_9ROSA (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Morus notabilis OX=981085 GN=L484_017751 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.5e-29
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 0


Query: 1  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60
          MELAD+ VGFLLSL SLSIFTYYTFWVIILPFVDSDHFI  YFLPQE+AILIPVFAGVVL
Sbjct: 1  MELADRAVGFLLSLISLSIFTYYTFWVIILPFVDSDHFIQQYFLPQEYAILIPVFAGVVL 60

Query: 61 LCLLGIFVGIVMLKSKRKKA 81
          LCLL +FVG+VMLKSK+KKA
Sbjct: 61 LCLLCVFVGLVMLKSKKKKA 80

The following BLAST results are available for this feature:

BLAST of Carg23597 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923351.1	1.0e-33	100.00	dolichol-phosphate mannose synthase subunit 2-like [Cucurbita moschata] >XP_0229...	[more]
XP_023552505.1	1.3e-33	98.75	dolichol-phosphate mannose synthase subunit 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_004148753.1	5.6e-32	93.75	PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis s...	[more]
XP_023540556.1	5.6e-32	95.00	dolichol-phosphate mannose synthase subunit 2 [Cucurbita pepo subsp. pepo]	[more]
XP_008448655.2	7.3e-32	92.50	PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Cucumis m...	[more]

BLAST of Carg23597 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74340.1	1.4e-29	77.50	dolichol phosphate-mannose biosynthesis regulatory protein-related	[more]

BLAST of Carg23597 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CA79\|DPM2_ARATH	2.6e-28	77.50	Dolichol-phosphate mannose synthase subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9Z1P1\|DPM2_CRIGR	1.3e-16	58.97	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus...	[more]
sp\|Q9Z324\|DPM2_MOUSE	2.2e-16	57.69	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus OX=10...	[more]
sp\|O94777\|DPM2_HUMAN	5.0e-16	57.69	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens OX=96...	[more]
sp\|Q9Z325\|DPM2_RAT	5.0e-16	56.41	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus ...	[more]

BLAST of Carg23597 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3V9\|A0A0A0L3V9_CUCSA	3.7e-32	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008860 PE=4 SV=1	[more]
tr\|A0A1S3BL34\|A0A1S3BL34_CUCME	4.8e-32	92.50	dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis melo OX=36...	[more]
tr\|B9MU62\|B9MU62_POPTR	6.5e-29	83.75	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G138100v3 PE=...	[more]
tr\|A0A2K2BX66\|A0A2K2BX66_POPTR	6.5e-29	83.75	Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_001G1...	[more]
tr\|W9RBD6\|W9RBD6_9ROSA	8.5e-29	87.50	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Morus notabilis OX...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0030234	enzyme regulator activity

Vocabulary: **Biological Process**
Term	Definition
GO:0019348	dolichol metabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0030176	integral component of endoplasmic reticulum membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR009914	DPM2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019348	dolichol metabolic process
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
molecular_function	GO:0030234	enzyme regulator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23597-RA	Carg23597-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009914	Dolichol phosphate-mannose biosynthesis regulatory	PFAM	PF07297	DPM2	coord: 4..79 e-value: 2.9E-34 score: 117.1
IPR009914	Dolichol phosphate-mannose biosynthesis regulatory	PANTHER	PTHR15039	FAMILY NOT NAMED	coord: 4..79
None	No IPR available	PANTHER	PTHR15039:SF11	DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN	coord: 4..79

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23597	Cla008829	Watermelon (97103) v1	carwmB1049
Carg23597	Csa3G008860	Cucumber (Chinese Long) v2	carcuB1064
Carg23597	MELO3C013830	Melon (DHL92) v3.5.1	carmeB1017
Carg23597	ClCG10G001370	Watermelon (Charleston Gray)	carwcgB1021
Carg23597	CSPI03G01410	Wild cucumber (PI 183967)	carcpiB1085
Carg23597	Cucsa.322010	Cucumber (Gy14) v1	carcgyB1164
Carg23597	CmaCh16G011790	Cucurbita maxima (Rimu)	carcmaB1453
Carg23597	CmoCh06G006410	Cucurbita moschata (Rifu)	carcmoB1409
Carg23597	CmoCh16G012290	Cucurbita moschata (Rifu)	carcmoB1407
Carg23597	Cp4.1LG14g09860	Cucurbita pepo (Zucchini)	carcpeB1461
Carg23597	Cp4.1LG08g08670	Cucurbita pepo (Zucchini)	carcpeB1463
Carg23597	CsGy3G001310	Cucumber (Gy14) v2	carcgybB1033
Carg23597	MELO3C013830.2	Melon (DHL92) v3.6.1	carmedB1029
Carg23597	CsaV3_3G001440	Cucumber (Chinese Long) v3	carcucB1097
Carg23597	Cla97C10G185980	Watermelon (97103) v2	carwmbB1107

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23597	Carg23396	Silver-seed gourd	carcarB651

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23597	Silver-seed gourd	carcarB613
Carg23597	Cucurbita maxima (Rimu)	carcmaB1454
Carg23597	Cucurbita moschata (Rifu)	carcmoB1408
Carg23597	Cucurbita pepo (Zucchini)	carcpeB1462
Carg23597	Bottle gourd (USVL1VR-Ls)	carlsiB957
Carg23597	Bottle gourd (USVL1VR-Ls)	carlsiB958
Carg23597	Wax gourd	carwgoB1230
Carg23597	Wax gourd	carwgoB1231