Cp4.1LG14g06660 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g06660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG14 : 275564 .. 280533 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATATAAATTTACAAGCAATGTTGTGTAATGGCCTTCCACCTATTAACATAGCTCCTTTAAGAAATGCTTCTTTTTCTCCTCTTGCTCTGTTTAGTCTGTTTCCTCTGTTTGTTCAGCCCTGCATCCACCTCTGAACTCTGTTTCCACTCCAGCTGCGATGGCGATTTTCAGACCATTCAATTCCCTTTCAGAATTGAAAACCAACAGCCCAAATCATGTGGGTATCCAGGCTTTGATTTGACCTGCCCCTCCACAGGTCAACCACTTCTCCATCTTCCTTCTTCAGGGGATTTCACTGTTCAGTACATAGATTACGAGAACCAAGAAATTTTGGTCAATGATCCAAACAAATGTCTTCCCCGAAAGATTCTGTCTCTCGAGCTTTCTGGGTCGCCGTTTCATGGCACAAATAGTGAAGATTTCACCTTCTTTAATTGTTCGTGGAGTGATCCAATCCCATCTGAGTTTAACTTGAATCCAATATATTGCCTCAGTGGGTTGTCGTATGCAGTTTTCGCATCACCTTCTTCATTTGTAAATGAGATTTTGTCGTCGAGTTGTGTTGCGATGAAGACTGTATCGGTGCCGTATTCATGGTCGTTTTCGACGGATTTGACGAATGATCTTCGATTGGGGTGGAAAAAGCCTAATTGTAGAAGGTGCGAGTCACACGGTGGAATATGTGGCCTCAAACCCAATTCTACCGATCAAATCCAATGCAAACACAGTGCTCAACCTCGACATGGTATGCTTCCACTTCTCCCTCTACCTCCGTTTAGTGCTTTCAACATTTTACAAAAGAACCCACCTTGTAAATAACATCACAAAATTTCAAACACCTTACAAGTATGGATGTTCATATAAGAGTGTGTGAAAGAAAAAGCTACCATTTTTCATATTTATTTTTGTAGTTCCAATAACTAATTTTTATTTATTTATTGACTAGTAAATTGGATAAGAGTAAACTTTTAATAATAATAGATTTATTTGCATCAATTGGGTAGGTAAGCTCACATTTTTTTAATTTTTTTTTTTACAAAAATTAGTATAAAAGTATTTTTAAAAAATAATTATTGAGGGTGGTTGATCCACCTTATAATAAAATAGGTAATAGACTTTTGGTTAGTATGAGCGCACGTCTTCATAGGATTTTTTTGCCCTAATCTTAGGGTCACCATATTGTTATATAGTAATTTTCTTTTAGTTAGGGGTGAACTATGTAAATTATTAATTGTAATATAAGATGTATATATATATATATTATTTTTTTAAAAAAATTATTATTAGGGATCCCGAGAGGTGCTCGCTATGCTGTATCCATAGGAGTGGGAGTCCCAGCGACCATGTGCATTTTGGGCTTCTTATGTTGCTTTTGTGCTCGAGTCAGATCCTACTCGAGAGGCCGAAACTCCAGCATTGAGGCCCATTGGGTCATCTCTTCTCGGCCCACTTTAATGGGCCTAGATGAGCCCACTATCGATTCCTATCCAAAAATTGAATTGGGTGAAAGCCTGCGTCTACCAAAGCCCAATGACAATATTTGCGCAATTTGCCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGAGTATACCCCAATGTCAACATTTCTTCCATCAAGATTGTATTGATGAATGGCTGCGATTGAATCCCTCCTGCCCTGTTTGTAGAATGCCTCCCGTCAAATCTCCGCCGTCCGATTCTTCCCTCTAACACCGTCCGTTGTAAATACTTCAGATTTTCTTTTTTCTTTTTTTTTCTTTTTCTTTCAAGGCTAAAACTTAGCTTTTTCTAAAGACCTACAAAAATGATGTAATATGGGTCTTTGGAATTTTTTGTATTCTTANTTTTTTTGCTTTAATATTTGAATTCTGGACTAAAAATTAAAAATTTAGAAATTTATGAAATTTATATATCTATTAAATATAAAATTGAGAGATATAATTAAAATGAATAATTTTTGGACCATTGAAATTTGAAAATCTTATCCATTTGAAACGGCAGTTGCAAATCCAATCTAAATAGCCCAACCAAGGCGCGAAAAAGAGCAACCGGTAATACAGTTAGAAGGTGAAGATGCAGAGTCTGCCTCCTCCCACTACCCTCAAAATTCCCTCCCTTTCTTCAAATCCCTCCCCTTCTCTCCAATTCCCCACATTTTCAACGAATCGTTTGATCCGCCAAATCAACGATGGCCGCCTTCGTACAGCGATCTCAACTCTCGAACACATGGTGCAGCACGGAACCCATCCTGATCTTCAAACCTATTCACTTTTCCTCAAAAGATGTATTAGAACTCGTAGTTTTGATCTTGGTAGGCTCGTTCATGAAAACCTCACTCAGTCGGACCTCCAGCTCGACTCTGTGACTCTCAATTCTTTGATTAGCTTGTACTCCAAGAGCGGGCAGTGGGAGAAAGCAAAATCCATTTTTGAGCGCATGGGAAATAGTAGGGATTTGATTTCGTGGAGTGCGATGGTCTCTTGCTTTGCCAATAACAAGATGGGGTTTGAGGCGCTTCATACGTTTCTTGATATGATCCAAAATGGTTATTACCCAAATGAGTATTGCTTTTCCGCCGCAATTCGCGCGTGTTCCACTGTTGAATTTGCATCGGTGGGTGACTCTATTTTTGGATATGTTATTAAAACTGGATATTTTGCTTCAGATGTATGCGTTGGGTGTGGCTTGATTGATATGTTTGTGAAGGGCCGCGGCGATTTGGTTTCTGCCTTTGAGGTGTTTGAGAAAATGCCGGAAAGAAATGCAGTTACTTGGACACTGATGATTACTAGATTTATGCAATTTGGGTACGCAGGGGAAGCCATTGATGTATTTTTGGATATGATATTAAGTGGATACGAACCTGATAGATTCACATTAAGTGCTGTGATATCAGCTAGTGCAAAGCTAGAATTGTTATCGTTAGGGCAGCAGTTGCACTCTCAAGCCATAAAACATGGGTTGACTCTGGATCGTTGTGTTGGTTGTTGTCTAATAAATATGTATGCTAAATGCTCTGTGGATGGATCCATGAGTGAATCCAGAAAGATTTTTGATCAGATTCTGGATCACAACGTCATCTCTTGGACTGCAATGATCACAGGATATGTTCAAAAAGGGGGATATGATAAAGAAGCTCTTGACCTTTTTCGTGGGATGATCTTGACTCACGTTCTACCCAACCATTTTACGTTTTCCAGCACTCTCAAGGCCTGTGCAAATCTAGCCGATCTACGGATTGGCGAACAGGTTTTTACTCATGCAGTAAAGCTCGGTTTCTCAATAGTTAATTGTGTTGCAAACTCACTTATTAGCATGTATGCACGATCTGGCAAAATTGATGATGCAAGGAAAGCGTTCGATATTCTGTTTGAGAAGAATTTGATTTCTTATAATACGGTAATTGATGCATATTCTAAGAACTTAAATTCTGAAGAAGCTTTTGAACTTTTCAATGAGATTGAGGATCAAGGGATGGGGGCTAGTGCTTTCACATTTGCTAGCCTTCTGAGTGGAGCAGCCAGCATTGGTACAATAGGGAAGGGCGAGCAAATTCATGCTCGCGTGATAAAGTCAGGTTTGAAGTCAAATCAATCCATATGCAATGCCTTAATCTCTATGTATTCCAAGTGTGGAGACATTGATTCTGCTTTCCAAGTTTTTGAAGACATGGACGACAGAAATGTCATCTCTTGGACTTCAATTATCACAGGGTTTGCAAAACATGGGTTTGCAACAAAAGCCTTGGAGCTGTTCCACAAGATGCTCGAGGCTGGTATTAGACCAAATGAGGTCTCCTACATTGCTGTTTTATCTGCTTGTAGTCACGTGGGTCTTGTTAATGAGGGTTGGAAACACTTCAAATCAATGTACGCAGAGCATGGAGTCACTCCGAGAATGGAACATTATGCTTGTATGGTTGACATACTGGGTCGTTCAGGATCTCTCTCTGAAGCCATTCAGTTTATCAACTCAATGCCTTTCAAAGCCGATGCACTTGTGTGGCGAACATTTCTCGGAGCATGTCGAGTTCACGACAACCTAGAATTGGGGAAACATGCTGCAAAAATGATCATCGAACAAGAGCCACAGGATCCTGCTGCATATATCTTGCTATCAAATTTGTATGCATCCACCTCGCAATGGGAAGAAGTTGCAAGTATTAGAAAGGTAATGAAACAAAAAAACTTGATCAAAGAAGCAGGCTGCAGCTGGGTAGAGATTGAAAATAAAGTACACAAGTTTTATGTGGGTGATACATCACATTCAAAAGCTGAGGAAATATATGATGAACTTGAACACTTGTCTTTAAAAATAAAGAAATTGGGATATGTCCCCAACATGGATTTTGTGCTTCATGATGTGGAGGAAGAGAAAAAGGAGAAATATTTGTTTCAGCACAGTGAAAGAATAGCAGTAGCCTTTGGTCTTATCAGCATATCTAAGTCGAAGCCCATCAGAGTTTTCAAGAATCTACGAATTTGTGGGGACTGTCACTCTGCAATCAAATACATTTCATTGGCCACAGGCAGAGAGATCATCGTTAGAGATGCAAACAGGTTTCATCATATTAAGGATGGAAGATGCTCCTGCAATGAGTATTGGTGATGATGTTAAAACTTAAAACTGAAGCTGATTTCACCATCATTTGGACAATGACTGATGCTGCAGTAACGAAACCTGGTGATTAAAGGGTGCTCGAAAACCGACGGTCGAAATCGGGTATGTCTTCTTCATCCAAAACTGGTGATTAAAGGGTGTTCCATATTCATTTTAATTTAGATAACCCCTCGTAGACATGGCTTGATTTACTTGATTTTCTACTTTCAATTCATTGTCTTTATCCTTTTTCTGATGCATAAAGATGAGTCCATATTAGAAACGTTCATAAATTAAGGGATAAGAATGGTGAATGATTCTGAGAAGAGACCATTGGTTCTGTTGCAACTACATTCTGAATACACC

mRNA sequence

AATATATAAATTTACAAGCAATGTTGTGTAATGGCCTTCCACCTATTAACATAGCTCCTTTAAGAAATGCTTCTTTTTCTCCTCTTGCTCTGTTTAGTCTGTTTCCTCTCCCTGCATCCACCTCTGAACTCTGTTTCCACTCCAGCTGCGATGGCGATTTTCAGACCATTCAATTCCCTTTCAGAATTGAAAACCAACAGCCCAAATCATGTGGGTATCCAGGCTTTGATTTGACCTGCCCCTCCACAGGTCAACCACTTCTCCATCTTCCTTCTTCAGGGGATTTCACTGTTCAGTACATAGATTACGAGAACCAAGAAATTTTGGTCAATGATCCAAACAAATGTCTTCCCCGAAAGATTCTGTCTCTCGAGCTTTCTGGGTCGCCGTTTCATGGCACAAATAGTGAAGATTTCACCTTCTTTAATTGTTCGTGGAGTGATCCAATCCCATCTGAGTTTAACTTGAATCCAATATATTGCCTCAGTGGGTTGTCGTATGCAGTTTTCGCATCACCTTCTTCATTTGTAAATGAGATTTTGTCGTCGAGTTGTGTTGCGATGAAGACTGTATCGGTGCCGTATTCATGGTCGTTTTCGACGGATTTGACGAATGATCTTCGATTGGGGTGGAAAAAGCCTAATTGTAGAAGGTGCGAGTCACACGGTGGAATATGTGGCCTCAAACCCAATTCTACCGATCAAATCCAATGCAAACACAGTGCTCAACCTCGACATGGGATCCCGAGAGGTGCTCGCTATGCTGTATCCATAGGAGTGGGAGTCCCAGCGACCATGTGCATTTTGGGCTTCTTATGTTGCTTTTGTGCTCGAGTCAGATCCTACTCGAGAGGCCGAAACTCCAGCATTGAGGCCCATTGGGTCATCTCTTCTCGGCCCACTTTAATGGGCCTAGATGAGCCCACTATCGATTCCTATCCAAAAATTGAATTGGGTGAAAGCCTGCGTCTACCAAAGCCCAATGACAATATTTGCGCAATTTGCCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGAGTATACCCCAATGTCAACATTTCTTCCATCAAGATTGTATTGATGAATGGCTGCGATTGAATCCCTCCTGCCCTAATGCCTCCCGTCAAATCTCCGCCGTCCGATTCTTCCCTCTAACACCGTCCGTTAGTCTGCCTCCTCCCACTACCCTCAAAATTCCCTCCCTTTCTTCAAATCCCTCCCCTTCTCTCCAATTCCCCACATTTTCAACGAATCGTTTGATCCGCCAAATCAACGATGGCCGCCTTCGTACAGCGATCTCAACTCTCGAACACATGGTGCAGCACGGAACCCATCCTGATCTTCAAACCTATTCACTTTTCCTCAAAAGATGTATTAGAACTCGTAGTTTTGATCTTGGTAGGCTCGTTCATGAAAACCTCACTCAGTCGGACCTCCAGCTCGACTCTGTGACTCTCAATTCTTTGATTAGCTTGTACTCCAAGAGCGGGCAGTGGGAGAAAGCAAAATCCATTTTTGAGCGCATGGGAAATAGTAGGGATTTGATTTCGTGGAGTGCGATGGTCTCTTGCTTTGCCAATAACAAGATGGGGTTTGAGGCGCTTCATACGTTTCTTGATATGATCCAAAATGGTTATTACCCAAATGAGTATTGCTTTTCCGCCGCAATTCGCGCGTGTTCCACTGTTGAATTTGCATCGGTGGGTGACTCTATTTTTGGATATGTTATTAAAACTGGATATTTTGCTTCAGATGTATGCGTTGGGTGTGGCTTGATTGATATGTTTGTGAAGGGCCGCGGCGATTTGGTTTCTGCCTTTGAGGTGTTTGAGAAAATGCCGGAAAGAAATGCAGTTACTTGGACACTGATGATTACTAGATTTATGCAATTTGGGTACGCAGGGGAAGCCATTGATGTATTTTTGGATATGATATTAAGTGGATACGAACCTGATAGATTCACATTAAGTGCTGTGATATCAGCTAGTGCAAAGCTAGAATTGTTATCGTTAGGGCAGCAGTTGCACTCTCAAGCCATAAAACATGGGTTGACTCTGGATCGTTGTGTTGGTTGTTGTCTAATAAATATGTATGCTAAATGCTCTGTGGATGGATCCATGAGTGAATCCAGAAAGATTTTTGATCAGATTCTGGATCACAACGTCATCTCTTGGACTGCAATGATCACAGGATATGTTCAAAAAGGGGGATATGATAAAGAAGCTCTTGACCTTTTTCGTGGGATGATCTTGACTCACGTTCTACCCAACCATTTTACGTTTTCCAGCACTCTCAAGGCCTGTGCAAATCTAGCCGATCTACGGATTGGCGAACAGGTTTTTACTCATGCAGTAAAGCTCGGTTTCTCAATAGTTAATTGTGTTGCAAACTCACTTATTAGCATGTATGCACGATCTGGCAAAATTGATGATGCAAGGAAAGCGTTCGATATTCTGTTTGAGAAGAATTTGATTTCTTATAATACGGTAATTGATGCATATTCTAAGAACTTAAATTCTGAAGAAGCTTTTGAACTTTTCAATGAGATTGAGGATCAAGGGATGGGGGCTAGTGCTTTCACATTTGCTAGCCTTCTGAGTGGAGCAGCCAGCATTGGGATAAGAATGGTGAATGATTCTGAGAAGAGACCATTGGTTCTGTTGCAACTACATTCTGAATACACC

Coding sequence (CDS)

ATGTTGTGTAATGGCCTTCCACCTATTAACATAGCTCCTTTAAGAAATGCTTCTTTTTCTCCTCTTGCTCTGTTTAGTCTGTTTCCTCTCCCTGCATCCACCTCTGAACTCTGTTTCCACTCCAGCTGCGATGGCGATTTTCAGACCATTCAATTCCCTTTCAGAATTGAAAACCAACAGCCCAAATCATGTGGGTATCCAGGCTTTGATTTGACCTGCCCCTCCACAGGTCAACCACTTCTCCATCTTCCTTCTTCAGGGGATTTCACTGTTCAGTACATAGATTACGAGAACCAAGAAATTTTGGTCAATGATCCAAACAAATGTCTTCCCCGAAAGATTCTGTCTCTCGAGCTTTCTGGGTCGCCGTTTCATGGCACAAATAGTGAAGATTTCACCTTCTTTAATTGTTCGTGGAGTGATCCAATCCCATCTGAGTTTAACTTGAATCCAATATATTGCCTCAGTGGGTTGTCGTATGCAGTTTTCGCATCACCTTCTTCATTTGTAAATGAGATTTTGTCGTCGAGTTGTGTTGCGATGAAGACTGTATCGGTGCCGTATTCATGGTCGTTTTCGACGGATTTGACGAATGATCTTCGATTGGGGTGGAAAAAGCCTAATTGTAGAAGGTGCGAGTCACACGGTGGAATATGTGGCCTCAAACCCAATTCTACCGATCAAATCCAATGCAAACACAGTGCTCAACCTCGACATGGGATCCCGAGAGGTGCTCGCTATGCTGTATCCATAGGAGTGGGAGTCCCAGCGACCATGTGCATTTTGGGCTTCTTATGTTGCTTTTGTGCTCGAGTCAGATCCTACTCGAGAGGCCGAAACTCCAGCATTGAGGCCCATTGGGTCATCTCTTCTCGGCCCACTTTAATGGGCCTAGATGAGCCCACTATCGATTCCTATCCAAAAATTGAATTGGGTGAAAGCCTGCGTCTACCAAAGCCCAATGACAATATTTGCGCAATTTGCCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGAGTATACCCCAATGTCAACATTTCTTCCATCAAGATTGTATTGATGAATGGCTGCGATTGAATCCCTCCTGCCCTAATGCCTCCCGTCAAATCTCCGCCGTCCGATTCTTCCCTCTAACACCGTCCGTTAGTCTGCCTCCTCCCACTACCCTCAAAATTCCCTCCCTTTCTTCAAATCCCTCCCCTTCTCTCCAATTCCCCACATTTTCAACGAATCGTTTGATCCGCCAAATCAACGATGGCCGCCTTCGTACAGCGATCTCAACTCTCGAACACATGGTGCAGCACGGAACCCATCCTGATCTTCAAACCTATTCACTTTTCCTCAAAAGATGTATTAGAACTCGTAGTTTTGATCTTGGTAGGCTCGTTCATGAAAACCTCACTCAGTCGGACCTCCAGCTCGACTCTGTGACTCTCAATTCTTTGATTAGCTTGTACTCCAAGAGCGGGCAGTGGGAGAAAGCAAAATCCATTTTTGAGCGCATGGGAAATAGTAGGGATTTGATTTCGTGGAGTGCGATGGTCTCTTGCTTTGCCAATAACAAGATGGGGTTTGAGGCGCTTCATACGTTTCTTGATATGATCCAAAATGGTTATTACCCAAATGAGTATTGCTTTTCCGCCGCAATTCGCGCGTGTTCCACTGTTGAATTTGCATCGGTGGGTGACTCTATTTTTGGATATGTTATTAAAACTGGATATTTTGCTTCAGATGTATGCGTTGGGTGTGGCTTGATTGATATGTTTGTGAAGGGCCGCGGCGATTTGGTTTCTGCCTTTGAGGTGTTTGAGAAAATGCCGGAAAGAAATGCAGTTACTTGGACACTGATGATTACTAGATTTATGCAATTTGGGTACGCAGGGGAAGCCATTGATGTATTTTTGGATATGATATTAAGTGGATACGAACCTGATAGATTCACATTAAGTGCTGTGATATCAGCTAGTGCAAAGCTAGAATTGTTATCGTTAGGGCAGCAGTTGCACTCTCAAGCCATAAAACATGGGTTGACTCTGGATCGTTGTGTTGGTTGTTGTCTAATAAATATGTATGCTAAATGCTCTGTGGATGGATCCATGAGTGAATCCAGAAAGATTTTTGATCAGATTCTGGATCACAACGTCATCTCTTGGACTGCAATGATCACAGGATATGTTCAAAAAGGGGGATATGATAAAGAAGCTCTTGACCTTTTTCGTGGGATGATCTTGACTCACGTTCTACCCAACCATTTTACGTTTTCCAGCACTCTCAAGGCCTGTGCAAATCTAGCCGATCTACGGATTGGCGAACAGGTTTTTACTCATGCAGTAAAGCTCGGTTTCTCAATAGTTAATTGTGTTGCAAACTCACTTATTAGCATGTATGCACGATCTGGCAAAATTGATGATGCAAGGAAAGCGTTCGATATTCTGTTTGAGAAGAATTTGATTTCTTATAATACGGTAATTGATGCATATTCTAAGAACTTAAATTCTGAAGAAGCTTTTGAACTTTTCAATGAGATTGAGGATCAAGGGATGGGGGCTAGTGCTTTCACATTTGCTAGCCTTCTGAGTGGAGCAGCCAGCATTGGGATAAGAATGGTGAATGATTCTGAGAAGAGACCATTGGTTCTGTTGCAACTACATTCTGAATACACC

Protein sequence

MLCNGLPPINIAPLRNASFSPLALFSLFPLPASTSELCFHSSCDGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHGTNSEDFTFFNCSWSDPIPSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFSTDLTNDLRLGWKKPNCRRCESHGGICGLKPNSTDQIQCKHSAQPRHGIPRGARYAVSIGVGVPATMCILGFLCCFCARVRSYSRGRNSSIEAHWVISSRPTLMGLDEPTIDSYPKIELGESLRLPKPNDNICAICLSEYRPKETVKSIPQCQHFFHQDCIDEWLRLNPSCPNASRQISAVRFFPLTPSVSLPPPTTLKIPSLSSNPSPSLQFPTFSTNRLIRQINDGRLRTAISTLEHMVQHGTHPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFASLLSGAASIGIRMVNDSEKRPLVLLQLHSEYT
Homology
[Close]
BLAST of Cp4.1LG14g06660 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.1e-137
Identity = 260/491 (52.95%), Postives = 343/491 (69.86%), Query Frame = 1 

Query: 381 SVSLPPPTTLKIPSLSSNPSPSLQFPTFSTNRLI-RQINDGRLRTAISTLEHMVQHGTHP 440
           S S P P  L I S      PS+       +RLI R +N G LR A+S L+ M + G  P
Sbjct: 5   SFSFPSPAKLPIKS-----QPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRP 64

Query: 441 -DLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSI 500
            D  T+S  LK CIR R F LG+LVH  L + D++ DSV  NSLISLYSKSG   KA+ +
Sbjct: 65  MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 124

Query: 501 FERMGN--SRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTV 560
           FE M     RD++SWSAM++C+ NN    +A+  F++ ++ G  PN+YC++A IRACS  
Sbjct: 125 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 184

Query: 561 EFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTL 620
           +F  VG    G+++KTG+F SDVCVGC LIDMFVKG     +A++VF+KM E N VTWTL
Sbjct: 185 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 244

Query: 621 MITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHG 680
           MITR MQ G+  EAI  FLDM+LSG+E D+FTLS+V SA A+LE LSLG+QLHS AI+ G
Sbjct: 245 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 304

Query: 681 LTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEAL 740
           L  D  V C L++MYAKCS DGS+ + RK+FD++ DH+V+SWTA+ITGY++      EA+
Sbjct: 305 LVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 364

Query: 741 DLFRGMILT-HVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISM 800
           +LF  MI   HV PNHFTFSS  KAC NL+D R+G+QV   A K G +  + VANS+ISM
Sbjct: 365 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 424

Query: 801 YARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTF 860
           + +S +++DA++AF+ L EKNL+SYNT +D   +NLN E+AF+L +EI ++ +G SAFTF
Sbjct: 425 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 484

Query: 861 ASLLSGAASIG 867
           ASLLSG A++G
Sbjct: 485 ASLLSGVANVG 488

[Close]
BLAST of Cp4.1LG14g06660 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 6.6e-61
Identity = 158/472 (33.47%), Postives = 245/472 (51.91%), Query Frame = 1 

Query: 456 SFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSIFERMGNSRDLISWSAMV 515
           S + GR V + + Q ++     T NS+++  +K G  ++A S+F  M   RD  +W++MV
Sbjct: 70  SLEDGRQVFDKMPQRNIY----TWNSVVTGLTKLGFLDEADSLFRSMPE-RDQCTWNSMV 129

Query: 516 SCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVEFASVGDSIFGYVIKTGYF 575
           S FA +    EAL  F  M + G+  NEY F++ + ACS +   + G  +   + K+  F
Sbjct: 130 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP-F 189

Query: 576 ASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLMITRFMQFGYAGEAIDVFL 635
            SDV +G  L+DM+ K  G++  A  VF++M +RN V+W  +IT F Q G A EA+DVF 
Sbjct: 190 LSDVYIGSALVDMYSKC-GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 249

Query: 636 DMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHG-LTLDRCVGCCLINMYAKC 695
            M+ S  EPD  TL++VISA A L  + +GQ++H + +K+  L  D  +    ++MYAKC
Sbjct: 250 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 309

Query: 696 S----------------------------VDGSMSESRKIFDQILDHNVISWTAMITGYV 755
           S                            +  S   +R +F ++ + NV+SW A+I GY 
Sbjct: 310 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 369

Query: 756 QKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVN 815
           Q G  ++EAL LF  +    V P H++F++ LKACA+LA+L +G Q   H +K GF   +
Sbjct: 370 QNGE-NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 429

Query: 816 ------CVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELF 875
                  V NSLI MY + G +++    F  + E++ +S+N +I  +++N    EA ELF
Sbjct: 430 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 489

Query: 876 NEIEDQGMGASAFTFASLLSGAASIGI----RMVNDSEKRPLVLLQLHSEYT 889
            E+ + G      T   +LS     G     R    S  R   +  L   YT
Sbjct: 490 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT 533

[Close]
BLAST of Cp4.1LG14g06660 vs. Swiss-Prot
Match: PP319_ARATH (Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.5e-60
Identity = 144/442 (32.58%), Postives = 237/442 (53.62%), Query Frame = 1 

Query: 425 AISTLEHMVQHGTH-PDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLI 484
           A +  E  V+HG    + + +   L  C R   F+LGR VH N+ +  +  + +  +SL+
Sbjct: 167 AFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLV 226

Query: 485 SLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNE 544
             Y++ G+   A   F+ M   +D+ISW+A++S  +    G +A+  F+ M+ + + PNE
Sbjct: 227 YFYAQCGELTSALRAFDMM-EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNE 286

Query: 545 YCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVF 604
           +   + ++ACS  +    G  +   V+K     +DV VG  L+DM+ K  G++    +VF
Sbjct: 287 FTVCSILKACSEEKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKC-GEISDCRKVF 346

Query: 605 EKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLS 664
           + M  RN VTWT +I    + G+  EAI +F  M       +  T+ +++ A   +  L 
Sbjct: 347 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 406

Query: 665 LGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMIT 724
           LG++LH+Q IK+ +  +  +G  L+ +Y KC   G   ++  +  Q+   +V+SWTAMI+
Sbjct: 407 LGKELHAQIIKNSIEKNVYIGSTLVWLYCKC---GESRDAFNVLQQLPSRDVVSWTAMIS 466

Query: 725 GYVQKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFS 784
           G     G++ EALD  + MI   V PN FT+SS LKACAN   L IG  + + A K    
Sbjct: 467 G-CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 526

Query: 785 IVNCVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEI 844
               V ++LI MYA+ G + +A + FD + EKNL+S+  +I  Y++N    EA +L   +
Sbjct: 527 SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 586

Query: 845 EDQGMGASAFTFASLLSGAASI 866
           E +G     + FA++LS    I
Sbjct: 587 EAEGFEVDDYIFATILSTCGDI 600

[Close]
BLAST of Cp4.1LG14g06660 vs. Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-58
Identity = 137/451 (30.38%), Postives = 239/451 (52.99%), Query Frame = 1 

Query: 419 DGRLRTAISTLEHMVQHGTHPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVT 478
           +G+   AI     M+Q    PD   +   +K C  +    LG+ +H  + + +     + 
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205

Query: 479 LNSLISLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNG 538
            N+LI++Y +  Q   A  +F  +   +DLISWS++++ F+     FEAL    +M+  G
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 265

Query: 539 -YYPNEYCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLV 598
            ++PNEY F ++++ACS++     G  I G  IK+   A +   GC L DM+ +  G L 
Sbjct: 266 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS-ELAGNAIAGCSLCDMYAR-CGFLN 325

Query: 599 SAFEVFEKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASA 658
           SA  VF+++   +  +W ++I      GYA EA+ VF  M  SG+ PD  +L +++ A  
Sbjct: 326 SARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 385

Query: 659 KLELLSLGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDH-NVI 718
           K   LS G Q+HS  IK G   D  V   L+ MY  CS    +     +F+   ++ + +
Sbjct: 386 KPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS---DLYCCFNLFEDFRNNADSV 445

Query: 719 SWTAMITGYVQKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTH 778
           SW  ++T  +Q      E L LF+ M+++   P+H T  + L+ C  ++ L++G QV  +
Sbjct: 446 SWNTILTACLQH-EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 505

Query: 779 AVKLGFSIVNCVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEA 838
           ++K G +    + N LI MYA+ G +  AR+ FD +  ++++S++T+I  Y+++   EEA
Sbjct: 506 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 565

Query: 839 FELFNEIEDQGMGASAFTFASLLSGAASIGI 868
             LF E++  G+  +  TF  +L+  + +G+
Sbjct: 566 LILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589

[Close]
BLAST of Cp4.1LG14g06660 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-58
Identity = 145/465 (31.18%), Postives = 246/465 (52.90%), Query Frame = 1 

Query: 408 FSTNRLIRQINDGRLRTAISTL-EHMVQHGTHPDLQTYSLFLKRCIR-TRSFDLGRLVHE 467
           F+ N++I+++    L   +  L   MV     P+  T+S  L+ C   + +FD+   +H 
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHA 211

Query: 468 NLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGF 527
            +    L+  +V  N LI LYS++G  + A+ +F+ +   +D  SW AM+S  + N+   
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RLKDHSSWVAMISGLSKNECEA 271

Query: 528 EALHTFLDMIQNGYYPNEYCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGL 587
           EA+  F DM   G  P  Y FS+ + AC  +E   +G+ + G V+K G F+SD  V   L
Sbjct: 272 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNAL 331

Query: 588 IDMFVKGRGDLVSAFEVFEKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPD 647
           + ++    G+L+SA  +F  M +R+AVT+  +I    Q GY  +A+++F  M L G EPD
Sbjct: 332 VSLYFH-LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 391

Query: 648 RFTLSAVISASAKLELLSLGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRK 707
             TL++++ A +    L  GQQLH+   K G   +  +   L+N+YAKC+    +  +  
Sbjct: 392 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA---DIETALD 451

Query: 708 IFDQILDHNVISWTAMITGYVQKGGYD--KEALDLFRGMILTHVLPNHFTFSSTLKACAN 767
            F +    NV+ W  M+  Y   G  D  + +  +FR M +  ++PN +T+ S LK C  
Sbjct: 452 YFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 511

Query: 768 LADLRIGEQVFTHAVKLGFSIVNCVANSLISMYARSGKIDDARKAFDILFE---KNLISY 827
           L DL +GEQ+ +  +K  F +   V + LI MYA+ GK+D    A+DIL     K+++S+
Sbjct: 512 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD---TAWDILIRFAGKDVVSW 571

Query: 828 NTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFASLLSGAASI 866
            T+I  Y++    ++A   F ++ D+G+ +      + +S  A +
Sbjct: 572 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604

[Close]
BLAST of Cp4.1LG14g06660 vs. TrEMBL
Match: A0A0A0LBE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603610 PE=4 SV=1)

HSP 1 Score: 851.7 bits (2199), Expect = 8.2e-244
Identity = 427/489 (87.32%), Postives = 451/489 (92.23%), Query Frame = 1 

Query: 383 SLPPPTTLKIPSLSSNPSPSLQFPTFS-----TNRLIRQINDGRLRTAISTLEHMVQHGT 442
           SLP PTTLKIP  SSNPS SLQFPTF+     T RLI++IN+GRL  AISTLEHMV  G+
Sbjct: 3   SLPLPTTLKIPFPSSNPSSSLQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGS 62

Query: 443 HPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKS 502
           HPDLQTYSLFLK+CIRTRSFD+G LVHE LTQSDLQLDSVTLNSLISLYSK GQWEKA S
Sbjct: 63  HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATS 122

Query: 503 IFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVE 562
           IF+ MG+SRDLISWSAMVSCFANN MGF AL TF+DMI+NGYYPNEYCF+AA RACST E
Sbjct: 123 IFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAE 182

Query: 563 FASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLM 622
           F SVGDSIFG+V+KTGY  SDVCVGCGLIDMFVKGRGDLVSAF+VFEKMPERNAVTWTLM
Sbjct: 183 FVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLM 242

Query: 623 ITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHGL 682
           ITR MQFGYAGEAID+FL+MILSGYEPDRFTLS VISA A +ELL LGQQLHSQAI+HGL
Sbjct: 243 ITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302

Query: 683 TLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEALD 742
           TLDRCVGCCLINMYAKCSVDGSM  +RKIFDQILDHNV SWTAMITGYVQKGGYD+EALD
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362

Query: 743 LFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISMYA 802
           LFRGMILTHV+PNHFTFSSTLKACANLA LRIGEQVFTHAVKLGFS VNCVANSLISMYA
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422

Query: 803 RSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFAS 862
           RSG+IDDARKAFDILFEKNLISYNTVIDAY+KNLNSEEA ELFNEIEDQGMGASAFTFAS
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482

Query: 863 LLSGAASIG 867
           LLSGAASIG
Sbjct: 483 LLSGAASIG 491

[Close]
BLAST of Cp4.1LG14g06660 vs. TrEMBL
Match: B9IDW4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s02060g PE=4 SV=2)

HSP 1 Score: 612.5 bits (1578), Expect = 8.4e-172
Identity = 288/444 (64.86%), Postives = 360/444 (81.08%), Query Frame = 1 

Query: 423 RTAISTLEHMVQHGTHPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSL 482
           + AISTL+ M   GTHPDL TYSL LK CIR+ ++ LG LVH  LTQS L+LDSV LNSL
Sbjct: 130 KKAISTLDQMSLQGTHPDLITYSLLLKSCIRSHNYQLGHLVHHRLTQSGLELDSVILNSL 189

Query: 483 ISLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPN 542
           ISLYSK G W++A  IFE MGN RDL+SWSA++SC+ANN+  FEA+  F DM++ G+YPN
Sbjct: 190 ISLYSKCGDWQQAHEIFESMGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPN 249

Query: 543 EYCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEV 602
           EYCF+   RACS  E  S+G  IFG+++KTGYF SDVCVGC LIDMFVKG GDL SA++V
Sbjct: 250 EYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKV 309

Query: 603 FEKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELL 662
           F++MP+RN VTWTLMITRF Q G++ +A+D+FLDM+LSGY PDRFTLS V+SA A++ LL
Sbjct: 310 FDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLL 369

Query: 663 SLGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMI 722
           SLG+Q H   +K GL LD CVGC L++MYAKC  DGS+ ++RK+FD++  HNV+SWTA+I
Sbjct: 370 SLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAII 429

Query: 723 TGYVQKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGF 782
           TGYVQ GG D+EA++LF  M+   V PNHFTFSS LKACANL+D+ +GEQV+   VK+  
Sbjct: 430 TGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRL 489

Query: 783 SIVNCVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNE 842
           + +NCV NSLISMY+R G +++ARKAFD+LFEKNL+SYNT+++AY+K+LNSEEAFELFNE
Sbjct: 490 ASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNE 549

Query: 843 IEDQGMGASAFTFASLLSGAASIG 867
           IE  G G +AFTFASLLSGA+SIG
Sbjct: 550 IEGAGTGVNAFTFASLLSGASSIG 573

[Close]
BLAST of Cp4.1LG14g06660 vs. TrEMBL
Match: M5WX51_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001611mg PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 7.1e-171
Identity = 293/434 (67.51%), Postives = 355/434 (81.80%), Query Frame = 1 

Query: 432 MVQHGTHPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQ 491
           M Q GTHPDL  YSL LK CIR+R+FDLGRLVH  L  S L+LD V LNSLISLYSKS  
Sbjct: 1   MAQRGTHPDLPIYSLLLKSCIRSRNFDLGRLVHARLVHSQLELDPVVLNSLISLYSKSRD 60

Query: 492 WEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIR 551
           W+KA SIFE MGN R+L+SWSAMVSCFANN MG EA+ TFLDM+++G+YPNEYCF++ IR
Sbjct: 61  WKKANSIFENMGNKRNLVSWSAMVSCFANNDMGLEAILTFLDMLEDGFYPNEYCFASVIR 120

Query: 552 ACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNA 611
           ACS  +   +G+ IFG VIK+GY  SDVCVGC LIDMF KG G+L  A++VFE MPE +A
Sbjct: 121 ACSNAQNIRIGNIIFGSVIKSGYLGSDVCVGCSLIDMFAKGSGELDDAYKVFETMPETDA 180

Query: 612 VTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQ 671
           VTWTLMITR  Q G  GEAID+++DM+ SG  PD+FTLS VISA  KL+ LSLGQQLHS 
Sbjct: 181 VTWTLMITRLAQMGCPGEAIDLYVDMLWSGLMPDQFTLSGVISACTKLDSLSLGQQLHSW 240

Query: 672 AIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGY 731
            I+ GL L  CVGCCL++MYAKC+ DGSM ++RK+FD++ +HNV+SWT++I GYVQ G  
Sbjct: 241 VIRSGLALGHCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVLSWTSIINGYVQSGEG 300

Query: 732 DKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANS 791
           D+EA+ LF GM+  HV PNHFTFSS LKACANL+DLR G+QV + AVKLG + VNCV NS
Sbjct: 301 DEEAIKLFVGMMTGHVPPNHFTFSSILKACANLSDLRKGDQVHSLAVKLGLASVNCVGNS 360

Query: 792 LISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGAS 851
           LISMY+RSG+++DARKAFDIL+EKNLISYNT++DAY+K+ ++EEAF +F+EI+D G GAS
Sbjct: 361 LISMYSRSGQVEDARKAFDILYEKNLISYNTIVDAYAKHSDTEEAFGIFHEIQDTGFGAS 420

Query: 852 AFTFASLLSGAASI 866
           AFTF+SLLSGAASI
Sbjct: 421 AFTFSSLLSGAASI 434

[Close]
BLAST of Cp4.1LG14g06660 vs. TrEMBL
Match: A0A061G281_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_015369 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 4.6e-170
Identity = 302/494 (61.13%), Postives = 379/494 (76.72%), Query Frame = 1 

Query: 380 PSVSLPPPTTLKI---PSLSSNPSPSLQFPTFST--NRLIRQINDGRLRTAISTLEHMVQ 439
           PS + PPP +LK    P  +  P   ++   F T  NRLI  +++G L  A+STL+ M +
Sbjct: 9   PSPAKPPPHSLKPSTRPRQTLAPPSVIRPVNFETLRNRLINHLDEGHLHKAVSTLDVMAR 68

Query: 440 HGTHPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEK 499
             THPDL TYSL LK CIR+R F LG++VH NL QS L+LDSV  NSLISLYSKSG W +
Sbjct: 69  QNTHPDLITYSLLLKACIRSRDFQLGKIVHTNLNQSKLELDSVLFNSLISLYSKSGDWAR 128

Query: 500 AKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACS 559
           A  IF+RM + RDL+SWSAM+SCFANNKM F+A+ TFLDM++NG+YPNEYCF+A +RACS
Sbjct: 129 AHKIFQRMEDKRDLVSWSAMISCFANNKMEFKAILTFLDMLENGFYPNEYCFTAVVRACS 188

Query: 560 TVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTW 619
             EF S+G+ I G+++K+GY  SD  VGC LIDMFVKG  DL SAF+VF+KMP +N V W
Sbjct: 189 KAEFFSIGEIILGFLVKSGYLESDTNVGCALIDMFVKGNSDLASAFKVFDKMPAKNVVAW 248

Query: 620 TLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKL--ELLSLGQQLHSQA 679
           TLMITR  Q GY  +AID+FLDM+L GY PDRFTLS +ISA  +L  E LSLG+QLHS  
Sbjct: 249 TLMITRCTQLGYPRDAIDLFLDMVLGGYVPDRFTLSGIISACTELESESLSLGKQLHSWV 308

Query: 680 IKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYD 739
           I+ G  LD C+GC L++MYAKC+V GS+ +SRK+F ++ +HNV+SWTA+ITGYVQ GG D
Sbjct: 309 IRSGFALDVCIGCSLVDMYAKCTVGGSLDDSRKVFGRMEEHNVMSWTAIITGYVQCGGRD 368

Query: 740 KEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSL 799
           KEAL+LF  M+   V PNHFTFSS LKAC NL+D   GEQ + HAVK GF+  +CV NSL
Sbjct: 369 KEALELFSKMMGGPVQPNHFTFSSVLKACGNLSDSCTGEQFYAHAVKHGFASDDCVGNSL 428

Query: 800 ISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASA 859
           ISMYARSG++D+A+KAF+ LFEKNL+SYNT++DA +KNL+SE AFELF+E+ D  +  +A
Sbjct: 429 ISMYARSGRMDNAQKAFESLFEKNLVSYNTIVDACAKNLDSEGAFELFHELTDSKIELNA 488

Query: 860 FTFASLLSGAASIG 867
           FTFASLLSGA+S+G
Sbjct: 489 FTFASLLSGASSVG 502

[Close]
BLAST of Cp4.1LG14g06660 vs. TrEMBL
Match: V4RMD3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006927mg PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 6.6e-169
Identity = 307/503 (61.03%), Postives = 385/503 (76.54%), Query Frame = 1 

Query: 381 SVSLPPPTTLKIPSLSS----NPS----------PSLQFPTFS---TNRLIRQINDGRLR 440
           ++SLP P   KIP LSS    NPS          P +  PT S   +NRLI  +N+GR++
Sbjct: 3   TLSLPAPA--KIPPLSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNEGRVQ 62

Query: 441 TAISTLEHMVQHGTHPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLI 500
            AI TL+ M Q G HPDL TYSL LK CIR+R+F LG+LVH  LT+S L+ +SV LNSLI
Sbjct: 63  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 122

Query: 501 SLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNE 560
           SLYSK G   +A  IF+ MGN RD++SWS+M+S + N     +A+H F++M++ G+ PNE
Sbjct: 123 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 182

Query: 561 YCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVF 620
           YCFSA IRACS  E  ++G  I+G+++K GYF SDVCVGC LIDMFVKG  DL SA++VF
Sbjct: 183 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 242

Query: 621 EKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLS 680
           +KM E+N V WTLMITR  Q G   +AI +FLDMILSG+ PDRFTLS V+SA ++LEL +
Sbjct: 243 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 302

Query: 681 LGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMIT 740
            G+QLHS AI+ GL LD CVGC L++MYAKC+VDGS+ +SRK+FD++LDHNV+SWTA+IT
Sbjct: 303 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 362

Query: 741 GYVQKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFS 800
           GYVQ GG DKEA+ LF  MI   V PNHFTF+S LKAC NL D  + EQV+THAVK G +
Sbjct: 363 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSSVAEQVYTHAVKRGRA 422

Query: 801 IVNCVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEI 860
           + +CV NSLISMYARSG+++DARKAF+ LFEKNL+SYNT++DAY+KNLNSE+AFEL +EI
Sbjct: 423 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 482

Query: 861 EDQGMGASAFTFASLLSGAASIG 867
           ED G+G SA+TFASLLSGA+SIG
Sbjct: 483 EDTGVGTSAYTFASLLSGASSIG 503

[Close]
BLAST of Cp4.1LG14g06660 vs. TAIR10
Match: AT3G49170.1 (AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 492.3 bits (1266), Expect = 6.4e-139
Identity = 260/491 (52.95%), Postives = 343/491 (69.86%), Query Frame = 1 

Query: 381 SVSLPPPTTLKIPSLSSNPSPSLQFPTFSTNRLI-RQINDGRLRTAISTLEHMVQHGTHP 440
           S S P P  L I S      PS+       +RLI R +N G LR A+S L+ M + G  P
Sbjct: 5   SFSFPSPAKLPIKS-----QPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRP 64

Query: 441 -DLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSI 500
            D  T+S  LK CIR R F LG+LVH  L + D++ DSV  NSLISLYSKSG   KA+ +
Sbjct: 65  MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 124

Query: 501 FERMGN--SRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTV 560
           FE M     RD++SWSAM++C+ NN    +A+  F++ ++ G  PN+YC++A IRACS  
Sbjct: 125 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 184

Query: 561 EFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTL 620
           +F  VG    G+++KTG+F SDVCVGC LIDMFVKG     +A++VF+KM E N VTWTL
Sbjct: 185 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 244

Query: 621 MITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHG 680
           MITR MQ G+  EAI  FLDM+LSG+E D+FTLS+V SA A+LE LSLG+QLHS AI+ G
Sbjct: 245 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 304

Query: 681 LTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEAL 740
           L  D  V C L++MYAKCS DGS+ + RK+FD++ DH+V+SWTA+ITGY++      EA+
Sbjct: 305 LVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 364

Query: 741 DLFRGMILT-HVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISM 800
           +LF  MI   HV PNHFTFSS  KAC NL+D R+G+QV   A K G +  + VANS+ISM
Sbjct: 365 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 424

Query: 801 YARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTF 860
           + +S +++DA++AF+ L EKNL+SYNT +D   +NLN E+AF+L +EI ++ +G SAFTF
Sbjct: 425 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 484

Query: 861 ASLLSGAASIG 867
           ASLLSG A++G
Sbjct: 485 ASLLSGVANVG 488

[Close]
BLAST of Cp4.1LG14g06660 vs. TAIR10
Match: AT5G53110.1 (AT5G53110.1 RING/U-box superfamily protein)

HSP 1 Score: 338.6 bits (867), Expect = 1.2e-92
Identity = 182/375 (48.53%), Postives = 239/375 (63.73%), Query Frame = 1 

Query: 18  SFSPLALFSLFPLPASTSEL--CFHSSCDGDFQTIQFPFRIENQQPKSCGYP-GFDLTCP 77
           SFS L L  L P   +T+    C ++ C  D   I+FPFR+++QQ  SCGY  GFDLTC 
Sbjct: 8   SFSLLFLSLLIPTTTTTTSTVTCTNAVCRRDGPIIRFPFRLKHQQSHSCGYDKGFDLTCD 67

Query: 78  --STGQPLLHLPSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHGTNSEDF 137
             +  +  + LP SG+FTV+ IDY  QEI +NDPN CLP++IL L L+ +PF G     F
Sbjct: 68  INAGNRTTITLPFSGNFTVEEIDYAAQEIWINDPNNCLPQRILQLNLNSTPFSGVYMRQF 127

Query: 138 TFFNCSWSDPIPSEFNLNPIYCLSGLSYAVFASPSS-FVNEILSSSCVAMKTVSVPYSWS 197
           TFFNC  S+ +     LNPI CLSG +  VFA+PS   +N + S SC  MKTV VP  W 
Sbjct: 128 TFFNCPTSEYLRFR-PLNPITCLSGKNSTVFATPSPRVINYLSSQSCRLMKTVYVPVRWP 187

Query: 198 F------STDLTNDLRLGWKKPNCRRCESHGGICGLKPNSTDQIQCKHSAQPRHGIPRGA 257
           F      S+DL+++L L W+ P C RCE  GG CG+K NS+ +I C H  +P   IPR A
Sbjct: 188 FYEQIVSSSDLSDNLWLTWRVPRCSRCEIKGGKCGIKSNSSREIICSHVHKP--AIPRRA 247

Query: 258 RYAVSIGVGVPATMCILGFLCCFCARVRSYSRGRN-------SSIEAHWVISSRPTLMGL 317
           RYA+++G G+P  + + G  C   +++ S  + R        ++ +AH++ SS   +MGL
Sbjct: 248 RYAIAVGAGIPGALIVFGLFCFVYSKISSCIKRRRLVPTPEINNAQAHYLHSS-VIVMGL 307

Query: 318 DEPTIDSYPKIELGESLRLPKPNDNICAICLSEYRPKETVKSIPQCQHFFHQDCIDEWLR 371
           D PTI+SYPKI LGES RLPK +D  CAICLSEY PKET+++IPQCQH FH DCIDEWL+
Sbjct: 308 DGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLK 367

[Close]
BLAST of Cp4.1LG14g06660 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 237.3 bits (604), Expect = 3.7e-62
Identity = 158/472 (33.47%), Postives = 245/472 (51.91%), Query Frame = 1 

Query: 456 SFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSIFERMGNSRDLISWSAMV 515
           S + GR V + + Q ++     T NS+++  +K G  ++A S+F  M   RD  +W++MV
Sbjct: 70  SLEDGRQVFDKMPQRNIY----TWNSVVTGLTKLGFLDEADSLFRSMPE-RDQCTWNSMV 129

Query: 516 SCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVEFASVGDSIFGYVIKTGYF 575
           S FA +    EAL  F  M + G+  NEY F++ + ACS +   + G  +   + K+  F
Sbjct: 130 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP-F 189

Query: 576 ASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLMITRFMQFGYAGEAIDVFL 635
            SDV +G  L+DM+ K  G++  A  VF++M +RN V+W  +IT F Q G A EA+DVF 
Sbjct: 190 LSDVYIGSALVDMYSKC-GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 249

Query: 636 DMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHG-LTLDRCVGCCLINMYAKC 695
            M+ S  EPD  TL++VISA A L  + +GQ++H + +K+  L  D  +    ++MYAKC
Sbjct: 250 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 309

Query: 696 S----------------------------VDGSMSESRKIFDQILDHNVISWTAMITGYV 755
           S                            +  S   +R +F ++ + NV+SW A+I GY 
Sbjct: 310 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 369

Query: 756 QKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVN 815
           Q G  ++EAL LF  +    V P H++F++ LKACA+LA+L +G Q   H +K GF   +
Sbjct: 370 QNGE-NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 429

Query: 816 ------CVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELF 875
                  V NSLI MY + G +++    F  + E++ +S+N +I  +++N    EA ELF
Sbjct: 430 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 489

Query: 876 NEIEDQGMGASAFTFASLLSGAASIGI----RMVNDSEKRPLVLLQLHSEYT 889
            E+ + G      T   +LS     G     R    S  R   +  L   YT
Sbjct: 490 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT 533

[Close]
BLAST of Cp4.1LG14g06660 vs. TAIR10
Match: AT4G18520.1 (AT4G18520.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 236.1 bits (601), Expect = 8.3e-62
Identity = 144/442 (32.58%), Postives = 237/442 (53.62%), Query Frame = 1 

Query: 425 AISTLEHMVQHGTH-PDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLI 484
           A +  E  V+HG    + + +   L  C R   F+LGR VH N+ +  +  + +  +SL+
Sbjct: 167 AFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLV 226

Query: 485 SLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNE 544
             Y++ G+   A   F+ M   +D+ISW+A++S  +    G +A+  F+ M+ + + PNE
Sbjct: 227 YFYAQCGELTSALRAFDMM-EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNE 286

Query: 545 YCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVF 604
           +   + ++ACS  +    G  +   V+K     +DV VG  L+DM+ K  G++    +VF
Sbjct: 287 FTVCSILKACSEEKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKC-GEISDCRKVF 346

Query: 605 EKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLS 664
           + M  RN VTWT +I    + G+  EAI +F  M       +  T+ +++ A   +  L 
Sbjct: 347 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 406

Query: 665 LGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMIT 724
           LG++LH+Q IK+ +  +  +G  L+ +Y KC   G   ++  +  Q+   +V+SWTAMI+
Sbjct: 407 LGKELHAQIIKNSIEKNVYIGSTLVWLYCKC---GESRDAFNVLQQLPSRDVVSWTAMIS 466

Query: 725 GYVQKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFS 784
           G     G++ EALD  + MI   V PN FT+SS LKACAN   L IG  + + A K    
Sbjct: 467 G-CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 526

Query: 785 IVNCVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEI 844
               V ++LI MYA+ G + +A + FD + EKNL+S+  +I  Y++N    EA +L   +
Sbjct: 527 SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 586

Query: 845 EDQGMGASAFTFASLLSGAASI 866
           E +G     + FA++LS    I
Sbjct: 587 EAEGFEVDDYIFATILSTCGDI 600

[Close]
BLAST of Cp4.1LG14g06660 vs. TAIR10
Match: AT3G53360.1 (AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 229.9 bits (585), Expect = 5.9e-60
Identity = 137/451 (30.38%), Postives = 239/451 (52.99%), Query Frame = 1 

Query: 419 DGRLRTAISTLEHMVQHGTHPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVT 478
           +G+   AI     M+Q    PD   +   +K C  +    LG+ +H  + + +     + 
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205

Query: 479 LNSLISLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNG 538
            N+LI++Y +  Q   A  +F  +   +DLISWS++++ F+     FEAL    +M+  G
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 265

Query: 539 -YYPNEYCFSAAIRACSTVEFASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLV 598
            ++PNEY F ++++ACS++     G  I G  IK+   A +   GC L DM+ +  G L 
Sbjct: 266 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS-ELAGNAIAGCSLCDMYAR-CGFLN 325

Query: 599 SAFEVFEKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASA 658
           SA  VF+++   +  +W ++I      GYA EA+ VF  M  SG+ PD  +L +++ A  
Sbjct: 326 SARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 385

Query: 659 KLELLSLGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDH-NVI 718
           K   LS G Q+HS  IK G   D  V   L+ MY  CS    +     +F+   ++ + +
Sbjct: 386 KPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS---DLYCCFNLFEDFRNNADSV 445

Query: 719 SWTAMITGYVQKGGYDKEALDLFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTH 778
           SW  ++T  +Q      E L LF+ M+++   P+H T  + L+ C  ++ L++G QV  +
Sbjct: 446 SWNTILTACLQH-EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 505

Query: 779 AVKLGFSIVNCVANSLISMYARSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEA 838
           ++K G +    + N LI MYA+ G +  AR+ FD +  ++++S++T+I  Y+++   EEA
Sbjct: 506 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 565

Query: 839 FELFNEIEDQGMGASAFTFASLLSGAASIGI 868
             LF E++  G+  +  TF  +L+  + +G+
Sbjct: 566 LILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589

[Close]
BLAST of Cp4.1LG14g06660 vs. NCBI nr
Match: gi|449467092|ref|XP_004151259.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Cucumis sativus])

HSP 1 Score: 851.7 bits (2199), Expect = 1.2e-243
Identity = 427/489 (87.32%), Postives = 451/489 (92.23%), Query Frame = 1 

Query: 383 SLPPPTTLKIPSLSSNPSPSLQFPTFS-----TNRLIRQINDGRLRTAISTLEHMVQHGT 442
           SLP PTTLKIP  SSNPS SLQFPTF+     T RLI++IN+GRL  AISTLEHMV  G+
Sbjct: 3   SLPLPTTLKIPFPSSNPSSSLQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGS 62

Query: 443 HPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKS 502
           HPDLQTYSLFLK+CIRTRSFD+G LVHE LTQSDLQLDSVTLNSLISLYSK GQWEKA S
Sbjct: 63  HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATS 122

Query: 503 IFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVE 562
           IF+ MG+SRDLISWSAMVSCFANN MGF AL TF+DMI+NGYYPNEYCF+AA RACST E
Sbjct: 123 IFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAE 182

Query: 563 FASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLM 622
           F SVGDSIFG+V+KTGY  SDVCVGCGLIDMFVKGRGDLVSAF+VFEKMPERNAVTWTLM
Sbjct: 183 FVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLM 242

Query: 623 ITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHGL 682
           ITR MQFGYAGEAID+FL+MILSGYEPDRFTLS VISA A +ELL LGQQLHSQAI+HGL
Sbjct: 243 ITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302

Query: 683 TLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEALD 742
           TLDRCVGCCLINMYAKCSVDGSM  +RKIFDQILDHNV SWTAMITGYVQKGGYD+EALD
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362

Query: 743 LFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISMYA 802
           LFRGMILTHV+PNHFTFSSTLKACANLA LRIGEQVFTHAVKLGFS VNCVANSLISMYA
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422

Query: 803 RSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFAS 862
           RSG+IDDARKAFDILFEKNLISYNTVIDAY+KNLNSEEA ELFNEIEDQGMGASAFTFAS
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482

Query: 863 LLSGAASIG 867
           LLSGAASIG
Sbjct: 483 LLSGAASIG 491

[Close]
BLAST of Cp4.1LG14g06660 vs. NCBI nr
Match: gi|659082006|ref|XP_008441615.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Cucumis melo])

HSP 1 Score: 843.6 bits (2178), Expect = 3.2e-241
Identity = 424/489 (86.71%), Postives = 450/489 (92.02%), Query Frame = 1 

Query: 383 SLPPPTTLKIPSLSSNPSPSLQFPTFS-----TNRLIRQINDGRLRTAISTLEHMVQHGT 442
           SLP PTTLKIP  S NPS SLQFP+F+     T+RLI++IN+GRL  AISTLEHMV  G+
Sbjct: 3   SLPLPTTLKIPFPSPNPSSSLQFPSFTNPNPLTDRLIQEINNGRLHKAISTLEHMVHQGS 62

Query: 443 HPDLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKS 502
           HPDLQTYSLFLK+CIRTRSFDLG LVHE LT+S+LQLDSVTLNSLISLYSK GQWEKA S
Sbjct: 63  HPDLQTYSLFLKKCIRTRSFDLGTLVHEKLTRSNLQLDSVTLNSLISLYSKCGQWEKATS 122

Query: 503 IFERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVE 562
           IF+RMG+SRDLISWSAMVSCFANN MGF AL TF+DMI+NGYYPNEYCF+AA RACS+ E
Sbjct: 123 IFQRMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSSAE 182

Query: 563 FASVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLM 622
           F SVGDSIFG+VIKTGYF SDVCVGCGLIDMFVKGRGDLVSAF+VFEKMPERNAVTWTLM
Sbjct: 183 FVSVGDSIFGFVIKTGYFESDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLM 242

Query: 623 ITRFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHGL 682
           ITR MQFG AGEAID+FLDMILSGYEPDRFTLS VISA A +ELL LGQQLHSQAIKHGL
Sbjct: 243 ITRLMQFGCAGEAIDLFLDMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIKHGL 302

Query: 683 TLDRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEALD 742
           TLDRCVGCCLINMYAKCSVDGSM  +RK+FDQILDHNV SWTAMITGYVQKGGYD+EALD
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCPARKVFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362

Query: 743 LFRGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISMYA 802
           LFRGMI THV+PNHFTFSSTLKACANLA LRIGEQVFTHAVKLGFS VNCVANSLISMYA
Sbjct: 363 LFRGMISTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422

Query: 803 RSGKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFAS 862
           RSG+IDDARKAFDILFEKNLISYNTVIDAY+ NLNSEEAF LFNEIEDQGMGASAFTFAS
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYATNLNSEEAFVLFNEIEDQGMGASAFTFAS 482

Query: 863 LLSGAASIG 867
           LLSGAASIG
Sbjct: 483 LLSGAASIG 491

[Close]
BLAST of Cp4.1LG14g06660 vs. NCBI nr
Match: gi|645248512|ref|XP_008230331.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Prunus mume])

HSP 1 Score: 632.1 bits (1629), Expect = 1.5e-177
Identity = 316/485 (65.15%), Postives = 383/485 (78.97%), Query Frame = 1 

Query: 381 SVSLPPPTTLKIPSLSSNPSPSLQFPTFSTNRLIRQINDGRLRTAISTLEHMVQHGTHPD 440
           S+SL  P  L +P  S  P  S  F + + NRLI  IN G LR AI+TL+ M Q GTHPD
Sbjct: 5   SLSLHAPAKLPLPP-SLRPQKSPNFDSLN-NRLISHINVGHLRKAITTLDLMAQRGTHPD 64

Query: 441 LQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSIFE 500
           L  YSL LK CIR+R+FDLGRLVH  L  S L+LD V LNSLISLYSKS  W+ A SIFE
Sbjct: 65  LPIYSLLLKSCIRSRNFDLGRLVHARLVHSQLELDPVVLNSLISLYSKSRDWKMANSIFE 124

Query: 501 RMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVEFAS 560
            MGN R+L+SWSAMVSCFANN MG EA+ TFLDM++NG+YPNEYCF++ IRACS  +   
Sbjct: 125 NMGNKRNLVSWSAMVSCFANNDMGLEAILTFLDMLENGFYPNEYCFASVIRACSKAQNIR 184

Query: 561 VGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLMITR 620
           +G+ IFG VIK+GY  SDVCVGC LIDMF KG G+L  A++VFE MPE +AVTWTLMITR
Sbjct: 185 IGNIIFGSVIKSGYLGSDVCVGCSLIDMFAKGSGELDDAYKVFETMPETDAVTWTLMITR 244

Query: 621 FMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHGLTLD 680
             Q G  GEAID+++DM+ SG  PD+FTLS VISA  KL+ LSLGQQLHS  I+ GL L 
Sbjct: 245 LAQMGCPGEAIDLYVDMLWSGLMPDQFTLSGVISACTKLDSLSLGQQLHSWVIRSGLALG 304

Query: 681 RCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEALDLFR 740
            CVGCCL++MYAKC+ DGSM ++RK+FD++ +HNV+SWT++I GYVQ G  D+EA+ LF 
Sbjct: 305 HCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVMSWTSIINGYVQSGEGDEEAIKLFV 364

Query: 741 GMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISMYARSG 800
           GM+  +V PNHFTFSS LKACANL+DLR G+QV + AVKLG + VNCV NSLISMY+RSG
Sbjct: 365 GMMTGYVPPNHFTFSSILKACANLSDLRKGDQVHSLAVKLGLASVNCVGNSLISMYSRSG 424

Query: 801 KIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFASLLS 860
           +++DARKAFDIL+EKNLISYNT++DAY+K+ ++EEAF LF+EI+D G GASAFTF+SLLS
Sbjct: 425 QVEDARKAFDILYEKNLISYNTIVDAYAKHSDTEEAFGLFHEIQDTGFGASAFTFSSLLS 484

Query: 861 GAASI 866
           GAASI
Sbjct: 485 GAASI 487

[Close]
BLAST of Cp4.1LG14g06660 vs. NCBI nr
Match: gi|296083564|emb|CBI23556.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 630.9 bits (1626), Expect = 3.3e-177
Identity = 313/469 (66.74%), Postives = 377/469 (80.38%), Query Frame = 1 

Query: 400 SPSLQFPTFST--NRLIRQINDGRLRTAISTLEHMVQHGTHPDLQTYSLFLKRCIRTRSF 459
           S SL+ P F    NRLIRQ++ GRL  A STL+ M Q    PDL TYS+ LK CIR R+F
Sbjct: 1   SLSLKNPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNF 60

Query: 460 DLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSIFERMGNSRDLISWSAMVSC 519
            LG+LVH  L QS L+LDSV LN+LISLYSK G  E A+ IFE MGN RDL+SWSAMVSC
Sbjct: 61  QLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSC 120

Query: 520 FANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVEFASVGDSIFGYVIKTGYFAS 579
           FANN M ++A+ TFLDM++ G+YPNEYCF+A IRACS   +A VG+ I+G+V+KTGY  +
Sbjct: 121 FANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA 180

Query: 580 DVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLMITRFMQFGYAGEAIDVFLDM 639
           DVCVGC LIDMFVKG GDL SA++VF+KMPERN VTWTLMITRF Q G A +AID+FLDM
Sbjct: 181 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 240

Query: 640 ILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHGLTLDRCVGCCLINMYAKCSVD 699
            LSGY PDRFT S+V+SA  +L LL+LG+QLHS+ I+ GL LD CVGC L++MYAKC+ D
Sbjct: 241 ELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD 300

Query: 700 GSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEALDLFRGMILTHVLPNHFTFSST 759
           GS+ +SRK+F+Q+ +HNV+SWTA+IT YVQ G  DKEA++LF  MI  H+ PNHF+FSS 
Sbjct: 301 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSV 360

Query: 760 LKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISMYARSGKIDDARKAFDILFEKNL 819
           LKAC NL+D   GEQV+++AVKLG + VNCV NSLISMYARSG+++DARKAFDILFEKNL
Sbjct: 361 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 420

Query: 820 ISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFASLLSGAASIG 867
           +SYN ++D Y+KNL SEEAF LFNEI D G+G SAFTFASLLSGAASIG
Sbjct: 421 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 469

[Close]
BLAST of Cp4.1LG14g06660 vs. NCBI nr
Match: gi|694396949|ref|XP_009373739.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 628.2 bits (1619), Expect = 2.1e-176
Identity = 309/486 (63.58%), Postives = 383/486 (78.81%), Query Frame = 1 

Query: 380 PSVSLPPPTTLKIPSLSSNPSPSLQFPTFSTNRLIRQINDGRLRTAISTLEHMVQHGTHP 439
           P +SL  P   K+P        +  F   + NRLI QIN G LR AI+TL+ + Q G HP
Sbjct: 2   PGLSLSLPAPAKLPPPPPLGPKATNFELLN-NRLINQINVGHLRKAITTLDLLAQRGIHP 61

Query: 440 DLQTYSLFLKRCIRTRSFDLGRLVHENLTQSDLQLDSVTLNSLISLYSKSGQWEKAKSIF 499
           DL TYSL +K CIR+R+FDLG+LVH+ L  S L+ D V LNSLISLYSKSG W+KA SIF
Sbjct: 62  DLPTYSLLIKSCIRSRNFDLGKLVHDRLAHSQLEPDPVLLNSLISLYSKSGDWKKANSIF 121

Query: 500 ERMGNSRDLISWSAMVSCFANNKMGFEALHTFLDMIQNGYYPNEYCFSAAIRACSTVEFA 559
           E MG+ R+L+SWSAMVSCFANN MGFEA+ TFLDM+++G+YPNEYCF++ IRACS     
Sbjct: 122 ENMGSERNLVSWSAMVSCFANNDMGFEAITTFLDMLEHGFYPNEYCFASVIRACSNARNI 181

Query: 560 SVGDSIFGYVIKTGYFASDVCVGCGLIDMFVKGRGDLVSAFEVFEKMPERNAVTWTLMIT 619
            +G  IFG VIK GY  SDVCVGC LIDMF KG GDL  A++VFE+MPE +AVTWTLMIT
Sbjct: 182 GIGKIIFGSVIKGGYLGSDVCVGCSLIDMFAKGGGDLGEAYKVFEEMPETDAVTWTLMIT 241

Query: 620 RFMQFGYAGEAIDVFLDMILSGYEPDRFTLSAVISASAKLELLSLGQQLHSQAIKHGLTL 679
           RF Q G+  EAI +++DM+LSG+ PD+F LS VISA  KLE LSLGQQLHS  I+ GL L
Sbjct: 242 RFAQMGFPREAIGLYVDMLLSGFMPDQFALSGVISACTKLESLSLGQQLHSWVIRSGLAL 301

Query: 680 DRCVGCCLINMYAKCSVDGSMSESRKIFDQILDHNVISWTAMITGYVQKGGYDKEALDLF 739
             CVGCCL++MYAKC+ DGSM+++RK+FD++ +HNV+SWTA+I GYVQ G  D+EA+ LF
Sbjct: 302 GHCVGCCLVDMYAKCAADGSMNDARKVFDRMPNHNVMSWTAIINGYVQSGKGDEEAIKLF 361

Query: 740 RGMILTHVLPNHFTFSSTLKACANLADLRIGEQVFTHAVKLGFSIVNCVANSLISMYARS 799
             M+  HV PNHFTFSS LKACANL+DLR GEQ+ + AVK G + VNCV NSLI+MY++S
Sbjct: 362 VEMMSGHVPPNHFTFSSILKACANLSDLRKGEQIHSLAVKSGLASVNCVGNSLITMYSKS 421

Query: 800 GKIDDARKAFDILFEKNLISYNTVIDAYSKNLNSEEAFELFNEIEDQGMGASAFTFASLL 859
           G+++DARK+FD+L+EKNLISYNT++DAY+K+L++EEAF LF+EI+D G GASAFTF+SLL
Sbjct: 422 GQVEDARKSFDVLYEKNLISYNTIVDAYAKHLDAEEAFGLFHEIQDTGYGASAFTFSSLL 481

Query: 860 SGAASI 866
           SGAASI
Sbjct: 482 SGAASI 486

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g06660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP272_ARATH1.1e-13752.95Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
PP151_ARATH6.6e-6133.47Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP319_ARATH1.5e-6032.58Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN... [more]
PP280_ARATH1.1e-5830.38Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... [more]
PP307_ARATH2.3e-5831.18Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... [more]
BLAST of Cp4.1LG14g06660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBE4_CUCSA8.2e-24487.32Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603610 PE=4 SV=1[more]
B9IDW4_POPTR8.4e-17264.86Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s02060g PE=4 SV=2[more]
M5WX51_PRUPE7.1e-17167.51Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001611mg PE=4 SV=1[more]
A0A061G281_THECC4.6e-17061.13Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0153... [more]
V4RMD3_9ROSI6.6e-16961.03Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006927mg PE=4 SV=1[more]
BLAST of Cp4.1LG14g06660 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49170.16.4e-13952.95 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G53110.11.2e-9248.53 RING/U-box superfamily protein[more]
AT2G13600.13.7e-6233.47 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G18520.18.3e-6232.58 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53360.15.9e-6030.38 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cp4.1LG14g06660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449467092|ref|XP_004151259.1|1.2e-24387.32PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic ... [more]
gi|659082006|ref|XP_008441615.1|3.2e-24186.71PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic ... [more]
gi|645248512|ref|XP_008230331.1|1.5e-17765.15PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic ... [more]
gi|296083564|emb|CBI23556.3|3.3e-17766.74unnamed protein product [Vitis vinifera][more]
gi|694396949|ref|XP_009373739.1|2.1e-17663.58PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030247polysaccharide binding
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR025287WAK_GUB
IPR013083Znf_RING/FYVE/PHD
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006468 protein phosphorylation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g06660.1Cp4.1LG14g06660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 324..365
score: 4.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 325..366
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 325..364
score: 10
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 477..503
score: 6.8E-7coord: 509..538
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 610..657
score: 4.9E-8coord: 815..862
score: 3.3E-10coord: 714..762
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 612..645
score: 0.0019coord: 818..848
score: 2.3E-6coord: 509..543
score: 3.8E-5coord: 477..502
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 542..576
score: 5.13coord: 816..850
score: 10.819coord: 578..609
score: 6.577coord: 440..474
score: 6.906coord: 507..541
score: 9.756coord: 610..644
score: 10.106coord: 750..784
score: 7.169coord: 785..815
score: 6.971coord: 475..505
score: 10.731coord: 645..679
score: 6.818coord: 714..749
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 478..538
score: 4.0E-6coord: 749..842
score: 4.0E-6coord: 360..375
score: 4.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 321..359
score: 2.2
IPR025287Wall-associated receptor kinase, galacturonan-binding domainPFAMPF13947GUB_WAK_bindcoord: 40..137
score: 5.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 786..866
score: 2.6E-216coord: 379..407
score: 2.6E-216coord: 464..750
score: 2.6E
NoneNo IPR availablePANTHERPTHR24015:SF154SUBFAMILY NOT NAMEDcoord: 464..750
score: 2.6E-216coord: 786..866
score: 2.6E-216coord: 379..407
score: 2.6E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 319..365
score: 1.44

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g06660CmaCh16G000600Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g06660CmoCh16G000660Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g06660Cla004244Watermelon (97103) v1cpewmB227
Cp4.1LG14g06660Csa3G603590Cucumber (Chinese Long) v2cpecuB211
Cp4.1LG14g06660ClCG05G008830Watermelon (Charleston Gray)cpewcgB207
Cp4.1LG14g06660CSPI03G26480Wild cucumber (PI 183967)cpecpiB214
Cp4.1LG14g06660Lsi05G000880Bottle gourd (USVL1VR-Ls)cpelsiB178
Cp4.1LG14g06660MELO3C006027.2Melon (DHL92) v3.6.1cpemedB225
Cp4.1LG14g06660CsaV3_3G027940Cucumber (Chinese Long) v3cpecucB0253
Cp4.1LG14g06660Bhi01G001099Wax gourdcpewgoB0296
Cp4.1LG14g06660CsGy3G024720Cucumber (Gy14) v2cgybcpeB323
Cp4.1LG14g06660CsGy3G008110Cucumber (Gy14) v2cgybcpeB321
Cp4.1LG14g06660Carg15073Silver-seed gourdcarcpeB1376
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g06660Cp4.1LG08g00720Cucurbita pepo (Zucchini)cpecpeB254
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g06660Silver-seed gourdcarcpeB0714
Cp4.1LG14g06660Silver-seed gourdcarcpeB0761
Cp4.1LG14g06660Cucumber (Chinese Long) v3cpecucB0275
Cp4.1LG14g06660Wax gourdcpewgoB0285
Cp4.1LG14g06660Cucurbita pepo (Zucchini)cpecpeB023
Cp4.1LG14g06660Cucurbita pepo (Zucchini)cpecpeB197
Cp4.1LG14g06660Cucurbita pepo (Zucchini)cpecpeB242
Cp4.1LG14g06660Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG14g06660Cucumber (Gy14) v1cgycpeB0573
Cp4.1LG14g06660Cucurbita maxima (Rimu)cmacpeB307
Cp4.1LG14g06660Cucurbita maxima (Rimu)cmacpeB425
Cp4.1LG14g06660Cucurbita maxima (Rimu)cmacpeB608
Cp4.1LG14g06660Cucurbita moschata (Rifu)cmocpeB270
Cp4.1LG14g06660Cucurbita moschata (Rifu)cmocpeB386
Cp4.1LG14g06660Cucurbita moschata (Rifu)cmocpeB557
Cp4.1LG14g06660Wild cucumber (PI 183967)cpecpiB227
Cp4.1LG14g06660Cucumber (Chinese Long) v2cpecuB225
Cp4.1LG14g06660Bottle gourd (USVL1VR-Ls)cpelsiB163
Cp4.1LG14g06660Watermelon (Charleston Gray)cpewcgB199
Cp4.1LG14g06660Watermelon (97103) v1cpewmB229
Cp4.1LG14g06660Melon (DHL92) v3.5.1cpemeB179
Cp4.1LG14g06660Cucumber (Gy14) v2cgybcpeB617
Cp4.1LG14g06660Melon (DHL92) v3.6.1cpemedB215