CsaV3_3G027940 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G027940
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	RING-H2 finger protein ATL20-like
Location	chr3 : 24407993 .. 24411070 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAAGATCACATCAAGTGTAGATGGTAGCTTTCTTGGTCCTTAGGCCTACCAATCTTACTTCATTTCAATAGTTTCATTTGACTTTTCCCTTAGTTAATGCCATTTGTTTAATTAGAATCTACAACCAACTTGGGATTTCTTTAGAAGACAATATATATAAATCCACAACCAATATTATACAAATCCCTTCTTCTTCTCCCCTTTTTCCTTTTCTAAAAAAGTAAAAATAAATCATGCTTCATAATCGTCTCCTCGTCCCCTGCTTTCTCTGCTTCCTCTGTTTCCTCAACCTCACAACAACCTCAGAACTCTGTTTGGACTCCACCTGCAATGGTAGTTTTCAAACCATCCGATTCCCGTTCAGAATTCAAAACCAACAACCAAAATCATGTGGATACCCCGCGTTTGACTTAACATGTCATCCCTCAGGTCAACCATTAATCCATCTCCCATTTTCAGGGGAATTCATAGTTCAATACATAGATTACAAGAACCAAGAAATTTGGGTCAATGATCCAAACAACTGTCTTCCTCGAAAGATTCTGTCTCTTATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCCGTATTTGCTTCTTCTTCTTCAATGGTGAATGAGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTTGGAGACGTATTCATGGGATTTGAGGAATGATCTGAGATTGGGGTGGAAAAAGCCTAATTGTAAGAAGTGCGAGTTAAATGGTGGAATATGTGGGATTAAACCCAATTCAACTAATGAAATTCAATGCAAATACAATACTTCGACTCAAAGTGGTAAGTTTCTTCTTTTCTTCATATTGTCTTTTCCTCTCCCTTTATACGTAACTTTACATGTCACCTTACAGACAAGTAGCTAGTTATTATAGTTTACGATTATATAGTTTAAGGTGTGATTAATTTAATTTGGATTATAGTACGAGTTTGTGTAAACTATTTTAATATAGAAAAATATAATTAAAGCTACAACAAAACATAAAAAGTAATAAATATAAAATATTAAAAAGTTAGCCGTAGTTAATTAGAAAATAAAAATAGTATTTACAACAATCAGAGGTAATTATTATAGTCTTATTAAATTATTGTCCAAACATTTTCTTAGTGTGGAAGGAAAAAAATTGATTGGAATAATAGGTGAAAGTTTTTATCTTTCTTAACCAGCATTGTCTTGGAAAACGAGTTATAATAGTTTTCTTATTCGTACGTTTTGGCCTAGATCGATGTTGAGATGAGAAATGTTTGTTTTCTTTAAGCAATGATTAAGTGCAACTAGTTTTATACATTATCTTTTTTCTTAAGATTTTTATAAAATCCTTTTTTGATAAACAAACTACCCGAAATTTGGTAGTTTTTCATTTGACTGTTGTCTGGGTTATGCCAATATGTTACTTATACGTGTAAAACATGGAAAACTAGCAAAAAAATAAAAAATATTTATACTTGTGTATTGAATTTGTGTCATTTTGTGATTTTTTTTAGCATGAAACCTAAATAGTTTGTTTTTTTCTATTAAACTATTTTATTATACTTAATTCTCTTTTTCTATAACTACTAGTGACTTGTAAAATAATTATTTCTTGCACTTCCAATGCGACTCACACTCTGATCCTTTTTCATGTTCCACTATATCTAAGGTATGGACGGTTTGATGAAGATTTGAAAACATAAAAGATGGCATAAAATTTGAAAAGATTAATATGTACAATGTTCACTTCAGCCAGATTTTACCATAAAAATTTTAAAAGACAAAGAAAAAACGTTAAAATTTTTATTCGAATCTCGATTGTCAATCATAATTGAAAAAATTATTTCAACGAATTCTGTTAAAGAGTGGAAAGTGTGAAAAATGAAAATATTTGAGTTGTTATTTGTACCTTTTTATACTTTCAATTTAAAAGAATTTTATTCTGTGTTTGGTAGATTCCATTAGTTAGGGTTAGACCAAATTGTTAGTTGACTATCATATGGATAAAAATCAACTATCAACAATAAATTTATTCGAATCAAAGAGTTAGGTAAAGTTTCATTTTCGATTTGTCATTTTAATTAGTTTTTAAACTTAGTTATTGATGGTTGTTGCCTTGATGATTCATCATCAAACACTAGGACATATGATATTATAAAAGAAAAAAAAACTTTAAATTAAAATAGATAAAACTCTAATGAAGCAAAACAAGAAAAAAATGATAGCTATGTTTGTGATTGTTACAGCTTTATTATAAGACATATTAGGTTTAAAAAATGAATGTTTAAACTTGTCCCCTACTTTTCACAAGTAAATAATAAATCAAATTTAAAATAATTAAAGAAAAAATTGTACTAATGATCCTTAATGTCTATTTGGTGATTGAGGTTTGAAAAGAAAATTATTATAACTAAACTTGAAAGATTAAAGTGTGATTAAAGATGAAATAGACTCAAACTTGATTTTGAGTATATTTAGAATTGTTGTAGGGATGGCAAGAGGAGCTCGGTATGCAATATCAATTGGAGTTGGAGTACCAGTAACGATGTGTGTTTTGGGGTTCTTATGTTGCCTTTGTGCTAGAGTCAGATCCTCCACAAGTGGGCGCAATTCAAGCATTGAGGCCCATTGGGTTATCTCTTCTCGGCCCATTACAATGGGCCTTGATGGGCCCACTATCGATTCATATCCAAAAATTGTATTGGGCGAAAGCTTGCGTCTACCAAAGCCCACTGACAATATATGCCCAATTTGCCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGACAATTCCACAATGTCAACATTTCTTCCATCAAGATTGTATTGACGAATGGCTGAGATTGAATCCCTCTTGCCCACTTTGTAGAATGCCTCCCCTTAAATCTCCACCGTCCCATTTTCCCCTCTAAATACCCTTCATCTTTCCCCACCTCACTTTACTTTCCATTTATCCAATCTGTA

mRNA sequence

ATGCTTCATAATCGTCTCCTCGTCCCCTGCTTTCTCTGCTTCCTCTGTTTCCTCAACCTCACAACAACCTCAGAACTCTGTTTGGACTCCACCTGCAATGGTAGTTTTCAAACCATCCGATTCCCGTTCAGAATTCAAAACCAACAACCAAAATCATGTGGATACCCCGCGTTTGACTTAACATGTCATCCCTCAGGTCAACCATTAATCCATCTCCCATTTTCAGGGGAATTCATAGTTCAATACATAGATTACAAGAACCAAGAAATTTGGGTCAATGATCCAAACAACTGTCTTCCTCGAAAGATTCTGTCTCTTATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCCGTATTTGCTTCTTCTTCTTCAATGGTGAATGAGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTTGGAGACGTATTCATGGGATTTGAGGAATGATCTGAGATTGGGGTGGAAAAAGCCTAATTGTAAGAAGTGCGAGTTAAATGGTGGAATATGTGGGATTAAACCCAATTCAACTAATGAAATTCAATGCAAATACAATACTTCGACTCAAAGTGGGATGGCAAGAGGAGCTCGGTATGCAATATCAATTGGAGTTGGAGTACCAGTAACGATGTGTGTTTTGGGGTTCTTATGTTGCCTTTGTGCTAGAGTCAGATCCTCCACAAGTGGGCGCAATTCAAGCATTGAGGCCCATTGGGTTATCTCTTCTCGGCCCATTACAATGGGCCTTGATGGGCCCACTATCGATTCATATCCAAAAATTGTATTGGGCGAAAGCTTGCGTCTACCAAAGCCCACTGACAATATATGCCCAATTTGCCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGACAATTCCACAATGTCAACATTTCTTCCATCAAGATTGTATTGACGAATGGCTGAGATTGAATCCCTCTTGCCCACTTTGTAGAATGCCTCCCCTTAAATCTCCACCGTCCCATTTTCCCCTCTAA

Coding sequence (CDS)

ATGCTTCATAATCGTCTCCTCGTCCCCTGCTTTCTCTGCTTCCTCTGTTTCCTCAACCTCACAACAACCTCAGAACTCTGTTTGGACTCCACCTGCAATGGTAGTTTTCAAACCATCCGATTCCCGTTCAGAATTCAAAACCAACAACCAAAATCATGTGGATACCCCGCGTTTGACTTAACATGTCATCCCTCAGGTCAACCATTAATCCATCTCCCATTTTCAGGGGAATTCATAGTTCAATACATAGATTACAAGAACCAAGAAATTTGGGTCAATGATCCAAACAACTGTCTTCCTCGAAAGATTCTGTCTCTTATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCCGTATTTGCTTCTTCTTCTTCAATGGTGAATGAGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTTGGAGACGTATTCATGGGATTTGAGGAATGATCTGAGATTGGGGTGGAAAAAGCCTAATTGTAAGAAGTGCGAGTTAAATGGTGGAATATGTGGGATTAAACCCAATTCAACTAATGAAATTCAATGCAAATACAATACTTCGACTCAAAGTGGGATGGCAAGAGGAGCTCGGTATGCAATATCAATTGGAGTTGGAGTACCAGTAACGATGTGTGTTTTGGGGTTCTTATGTTGCCTTTGTGCTAGAGTCAGATCCTCCACAAGTGGGCGCAATTCAAGCATTGAGGCCCATTGGGTTATCTCTTCTCGGCCCATTACAATGGGCCTTGATGGGCCCACTATCGATTCATATCCAAAAATTGTATTGGGCGAAAGCTTGCGTCTACCAAAGCCCACTGACAATATATGCCCAATTTGCCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGACAATTCCACAATGTCAACATTTCTTCCATCAAGATTGTATTGACGAATGGCTGAGATTGAATCCCTCTTGCCCACTTTGTAGAATGCCTCCCCTTAAATCTCCACCGTCCCATTTTCCCCTCTAA

Protein sequence

MLHNRLLVPCFLCFLCFLNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPPLKSPPSHFPL

Homology

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BLAST of CsaV3_3G027940 vs. NCBI nr
Match: XP_011651602.1 (PREDICTED: RING-H2 finger protein ATL20-like [Cucumis sativus] >KGN58272.1 hypothetical protein Csa_3G603590 [Cucumis sativus])

HSP 1 Score: 771.9 bits (1992), Expect = 9.6e-220
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60
           MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL
Sbjct: 1   MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60

Query: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120
           TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD
Sbjct: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120

Query: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180
           FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE
Sbjct: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180

Query: 181 TYSWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAIS 240
           TYSWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAIS
Sbjct: 181 TYSWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAIS 240

Query: 241 IGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIV 300
           IGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIV
Sbjct: 241 IGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIV 300

Query: 301 LGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 360
           LGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP
Sbjct: 301 LGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 360

Query: 361 LKSPPSHFPL 371
           LKSPPSHFPL
Sbjct: 361 LKSPPSHFPL 370

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BLAST of CsaV3_3G027940 vs. NCBI nr
Match: XP_008441618.1 (PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo])

HSP 1 Score: 713.8 bits (1841), Expect = 3.1e-202
Identity = 345/373 (92.49%), Postives = 353/373 (94.64%), Query Frame = 0


Query: 1   MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60
           MLH  LL PC  XXXXXXNLTTTSELC DSTCNG+FQTIRFPFRIQN+QPKSCGYP FDL
Sbjct: 2   MLHYHLLFPCXXXXXXXXNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDL 61

Query: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120
           TCHP+GQPLIHLP SGEFIVQYIDY+NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD
Sbjct: 62  TCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 121

Query: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180
           FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVN ILSSRCELVKTVSVPMS E
Sbjct: 122 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSE 181

Query: 181 TYSW--DLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYA 240
           +YSW  DLRNDLRL WKKPNCKKCELNGG+CGIKPNSTNEIQCKYNTST SGM RGARYA
Sbjct: 182 SYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPSGMPRGARYA 241

Query: 241 ISIGVGVPVTMCVLGFLCCLCARVR-SSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYP 300
           ISIGVGVP TMCVLGFLCC CARVR SST GRNSSIEAHWVISSRPITMGLDGPTIDSYP
Sbjct: 242 ISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRPITMGLDGPTIDSYP 301

Query: 301 KIVLGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCR 360
           KIVLGESLRLPKP+DNICPICLSEYRPKETVKTIPQC+HFFHQDCIDEWLRLNPSCPLCR
Sbjct: 302 KIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCIDEWLRLNPSCPLCR 361

Query: 361 MPPLKSPPSHFPL 371
           MPPLKSPPS FPL
Sbjct: 362 MPPLKSPPSDFPL 374

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BLAST of CsaV3_3G027940 vs. NCBI nr
Match: XP_023553169.1 (RING-H2 finger protein ATL22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.2 bits (1489), Expect = 2.0e-161
Identity = 269/345 (77.97%), Postives = 299/345 (86.67%), Query Frame = 0


Query: 22  TTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQ 81
           +TSELC  S+C+G FQTI+FPFRI+NQQPKSCGYP FDLTC  +GQPL+HLP SG+F VQ
Sbjct: 21  STSELCFHSSCDGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQ 80

Query: 82  YIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPI 141
           YIDY+NQEI VNDPN CLPRKILSL L GSPF   N+ DFTFFNCS SD IP +FNLNPI
Sbjct: 81  YIDYENQEILVNDPNKCLPRKILSLELSGSPFHGTNSEDFTFFNCSWSDPIPSEFNLNPI 140

Query: 142 SCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPNCKK 201
            CLSGLSYAVFAS SS VNEILSS C  +KTVSVP S  ++S DL NDLRLGWKKPNC++
Sbjct: 141 YCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSW-SFSTDLTNDLRLGWKKPNCRR 200

Query: 202 CELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCAR 261
           CE +GGICG+KPNST++IQCK++   + G+ RGARYA+SIGVGVP TMC+LGFLCC CAR
Sbjct: 201 CESHGGICGLKPNSTDQIQCKHSAQPRHGIPRGARYAVSIGVGVPATMCILGFLCCFCAR 260

Query: 262 VRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSE 321
           VRS + GRNSSIEAHWVISSRP  MGLD PTIDSYPKI LGESLRLPKP DNIC ICLSE
Sbjct: 261 VRSYSRGRNSSIEAHWVISSRPTLMGLDEPTIDSYPKIELGESLRLPKPNDNICAICLSE 320

Query: 322 YRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPPLKSPPS 367
           YRPKETVK+IPQCQHFFHQDCIDEWLRLNPSCP+CRMPP+KSPPS
Sbjct: 321 YRPKETVKSIPQCQHFFHQDCIDEWLRLNPSCPVCRMPPVKSPPS 364

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BLAST of CsaV3_3G027940 vs. NCBI nr
Match: XP_022922932.1 (RING-H2 finger protein ATL22-like [Cucurbita moschata])

HSP 1 Score: 573.2 bits (1476), Expect = 6.6e-160
Identity = 268/345 (77.68%), Postives = 297/345 (86.09%), Query Frame = 0


Query: 22  TTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQ 81
           +TSELC  S+CNG FQTI+FPFRI+NQQPKSCGYP FDLTC  +GQPL+HLP SG+F VQ
Sbjct: 21  STSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQ 80

Query: 82  YIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPI 141
           YIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFTFFNCS SD IP +FNLNPI
Sbjct: 81  YIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPI 140

Query: 142 SCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPNCKK 201
            CLSGLSYAVFAS SS VNEILSS C  +KTVSVP S  ++S DL NDLRLGWKKPNC++
Sbjct: 141 YCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSW-SFSADLTNDLRLGWKKPNCRR 200

Query: 202 CELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCAR 261
           CE  GGICG+ PNST++IQCK++   + G+ RGARYA+SIGVGVPV+MC+LGFLCC CAR
Sbjct: 201 CESQGGICGLAPNSTDQIQCKHSAQPRHGIPRGARYAVSIGVGVPVSMCILGFLCCFCAR 260

Query: 262 VRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSE 321
           V S + GRNSSIEAHWVISSRP  MGLD PTIDSYPKI LGESLRLPKP DNIC ICLSE
Sbjct: 261 VGSYSRGRNSSIEAHWVISSRPTLMGLDEPTIDSYPKIELGESLRLPKPNDNICAICLSE 320

Query: 322 YRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPPLKSPPS 367
           YRPKETVK+IPQCQHFFHQDCI EWLRLNPSCP+CRMPP+KSPPS
Sbjct: 321 YRPKETVKSIPQCQHFFHQDCIHEWLRLNPSCPVCRMPPVKSPPS 364

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BLAST of CsaV3_3G027940 vs. NCBI nr
Match: XP_022984777.1 (RING-H2 finger protein ATL22-like [Cucurbita maxima])

HSP 1 Score: 567.4 bits (1461), Expect = 3.6e-158
Identity = 265/345 (76.81%), Postives = 296/345 (85.80%), Query Frame = 0


Query: 22  TTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQ 81
           +TSELC  S+CNG FQTI+FPFRI+NQQPKSCGYP FDLTC  +GQPL+HLP SG+F VQ
Sbjct: 21  STSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQ 80

Query: 82  YIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPI 141
           YIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFT FNCS SD IP + NLNPI
Sbjct: 81  YIDYENQEILVNDPNKCLPRKILSLELSGSPFQATNSEDFTLFNCSWSDPIPSELNLNPI 140

Query: 142 SCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPNCKK 201
            CLSGLSYAVFAS SS VNEILSSRC  +KTVSVP S  ++S DL NDLRLGWKKPNC++
Sbjct: 141 YCLSGLSYAVFASPSSFVNEILSSRCVAMKTVSVPYSW-SFSPDLTNDLRLGWKKPNCRR 200

Query: 202 CELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCAR 261
           CE +GGICG++PNST++IQCK++   + G+ RGARYA+SIGVGVPV+MCVLGFLCC CAR
Sbjct: 201 CESHGGICGLEPNSTDQIQCKHSAQPRHGIPRGARYAVSIGVGVPVSMCVLGFLCCFCAR 260

Query: 262 VRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSE 321
           VRS + GRNSSIEAHWVISSRP  MGLD PTIDSYPK  LGESLRLPKP DNIC ICLSE
Sbjct: 261 VRSYSRGRNSSIEAHWVISSRPTLMGLDEPTIDSYPKFELGESLRLPKPNDNICAICLSE 320

Query: 322 YRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPPLKSPPS 367
           YRPKE VK+IP C+HFFHQDCIDEWLRLN SCP+CRMPP+KSPPS
Sbjct: 321 YRPKEIVKSIPHCRHFFHQDCIDEWLRLNASCPVCRMPPVKSPPS 364

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BLAST of CsaV3_3G027940 vs. TAIR10
Match: AT5G53110.1 (RING/U-box superfamily protein)

HSP 1 Score: 330.1 bits (845), Expect = 1.8e-90
Identity = 175/348 (50.29%), Postives = 224/348 (64.37%), Query Frame = 0


Query: 29  DSTCNGSFQTIRFPFRIQNQQPKSCGY-PAFDLTC--HPSGQPLIHLPFSGEFIVQYIDY 88
           ++ C      IRFPFR+++QQ  SCGY   FDLTC  +   +  I LPFSG F V+ IDY
Sbjct: 32  NAVCRRDGPIIRFPFRLKHQQSHSCGYDKGFDLTCDINAGNRTTITLPFSGNFTVEEIDY 91

Query: 89  KNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLS 148
             QEIW+NDPNNCLP++IL L L  +PF       FTFFNC  S+ + +   LNPI+CLS
Sbjct: 92  AAQEIWINDPNNCLPQRILQLNLNSTPFSGVYMRQFTFFNCPTSEYLRFR-PLNPITCLS 151

Query: 149 GLSYAVFASSSSMVNEILSSR-CELVKTVSVPMSLETY-----SWDLRNDLRLGWKKPNC 208
           G +  VFA+ S  V   LSS+ C L+KTV VP+    Y     S DL ++L L W+ P C
Sbjct: 152 GKNSTVFATPSPRVINYLSSQSCRLMKTVYVPVRWPFYEQIVSSSDLSDNLWLTWRVPRC 211

Query: 209 KKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLC 268
            +CE+ GG CGIK NS+ EI C +    +  + R ARYAI++G G+P  + V G  C + 
Sbjct: 212 SRCEIKGGKCGIKSNSSREIICSH--VHKPAIPRRARYAIAVGAGIPGALIVFGLFCFVY 271

Query: 269 ARVRSSTSGRN-------SSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPTD 328
           +++ S    R        ++ +AH++ SS  I MGLDGPTI+SYPKIVLGES RLPK  D
Sbjct: 272 SKISSCIKRRRLVPTPEINNAQAHYLHSS-VIVMGLDGPTIESYPKIVLGESKRLPKVDD 331

Query: 329 NICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 361
             C ICLSEY PKET++TIPQCQH FH DCIDEWL+LN +CP+CR  P
Sbjct: 332 ATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNSP 375

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BLAST of CsaV3_3G027940 vs. TAIR10
Match: AT2G46495.1 (RING/U-box superfamily protein)

HSP 1 Score: 221.9 bits (564), Expect = 6.7e-58
Identity = 132/352 (37.50%), Postives = 194/352 (55.11%), Query Frame = 0


Query: 27  CLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYK 86
           C  S+C      +RFPF + ++QP+ CG+  F+L C  S +  + LP SG F+V+ IDY 
Sbjct: 26  CSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPKTALKLPNSGTFLVREIDYL 85

Query: 87  NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSG 146
           +Q+I + DP NCL RK+L+  +  SPF A   V +TF +C   +E+      + I CL  
Sbjct: 86  SQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSC--PNEVAKSSRFDSIPCLGN 145

Query: 147 LSYAVFASSSSMVNEILSSRCELVKTVSVPMSLET------YSWDLRN-DLRLGWKKPNC 206
            + +  A++S  + + +   C++VKT+ VP+S         +S D+ + DL L W  P+C
Sbjct: 146 STTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLKWDSPSC 205

Query: 207 KKCELNGGICGIKPNSTNEIQC------KYNTSTQSGMARGARYAISIGVGVPVTMCVLG 266
             CE +   CG + N++ +++C       YNT  Q          I + +  P+T+    
Sbjct: 206 SDCERDFLRCGFRSNTSLQVKCFPFENSGYNTEPQ------VLKIILLSIIGPLTIFATC 265

Query: 267 FLCCLCARVR-SSTSGRNSSIEA---HWVISSRPITMGLDGPTIDSYPKIVLGESLRLPK 326
               +C   R +S   RN +I A   + VI    +T GLD   I+SY K  LGES RLP 
Sbjct: 266 IAVGVCTSERFASLIQRNVAIAALQPNEVI----VTTGLDESIIESYKKTELGESRRLPG 325

Query: 327 PTDNI-CPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 361
             D+I CPICLSEY  KETV+ IP+C H FH +CID WL+++ SCPLCR  P
Sbjct: 326 NNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSP 365

[Close]

BLAST of CsaV3_3G027940 vs. TAIR10
Match: AT2G46494.1 (RING/U-box superfamily protein)

HSP 1 Score: 215.3 bits (547), Expect = 6.3e-56
Identity = 118/328 (35.98%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 39  IRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNC 98
           IRFPF         C +P F+L C      ++ LP SG F VQYIDY+ Q+I++NDP NC
Sbjct: 46  IRFPF---------CDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENC 105

Query: 99  LPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSM 158
           L +++L+  + GSPF  +    +TF  C     +P  +    I CLS  + + FA+S+  
Sbjct: 106 LAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWY--PSIPCLSNSTSSFFATSNFA 165

Query: 159 VNEILSSRCELVKTVSVPMS---LET-YSWDLRNDLRLGWKKPNCKKCELNGGICGIKPN 218
           + E +   C++VK + VP      ET +S  L   L L W  PNC+ CE++   CG K  
Sbjct: 166 LAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNK 225

Query: 219 STNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSI- 278
           ++ E++C +       ++R     +++ + + +   V+ F+ C+  R+ ++   R+ ++ 
Sbjct: 226 ASPEVKC-FGAKKSGHLSRA---VVAVLICLSIIGAVILFVTCIAIRIHNTPRRRHWAVP 285

Query: 279 EAHWVISSRP----ITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKETVK 338
            A   +  +P     T GLD  TI+ Y  + LGES R P     +CPICLSEY  KETV+
Sbjct: 286 AAAATVMQQPREVMATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVR 345

Query: 339 TIPQCQHFFHQDCIDEWLRLNPSCPLCR 358
            IP+C H FH  CID WL+++ SCPLCR
Sbjct: 346 FIPECDHCFHAKCIDVWLKIHGSCPLCR 358

[Close]

BLAST of CsaV3_3G027940 vs. TAIR10
Match: AT2G25410.1 (RING/U-box superfamily protein)

HSP 1 Score: 209.1 bits (531), Expect = 4.5e-54
Identity = 128/352 (36.36%), Postives = 183/352 (51.99%), Query Frame = 0


Query: 27  CLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYK 86
           C   +C+      RFPF + + QP+SCGY  F+L C       + LP S  F+V+ IDY+
Sbjct: 29  CYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDDANTTLKLPKSEPFLVKEIDYE 88

Query: 87  NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSG 146
            Q I +NDP NCL R++L+    GSPF    + ++TF  C     I   F    I CL  
Sbjct: 89  TQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKEANITASF--RAIDCLGN 148

Query: 147 LSYAVFASSSSMVNEILSSRCELVKTVSVPMS----LETYSWDLRN--DLRLGWKKPNCK 206
            + + F      +  + SS C + K + +P S      TY  D +N  D+ L W  P+C+
Sbjct: 149 TTSSFFVVQFENLGSMPSS-CHIFKILPLPFSWFVAYTTYP-DGQNSRDMWLKWDSPDCR 208

Query: 207 KCE-LNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISI------GVGVPVTMCVLG 266
            CE      CG K N++++++C   +S   G+       + I      G    +T CV G
Sbjct: 209 DCERRTNSRCGFKNNTSHQVEC--FSSVNPGLHNTGLQVLKIMCLSLVGPLTALTFCV-G 268

Query: 267 FLCCLCARVRSSTSGRNSSIEAHWVISSRP----ITMGLDGPTIDSYPKIVLGESLRLPK 326
            + C   RV SS   +         ++S+P      +GLD  TI+SY K+ LGES RLP 
Sbjct: 269 LVMCSSERV-SSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESRRLPT 328

Query: 327 -PTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 361
              D +CPICLSEY  KETV+ +P+C+H FH +CID WL+L+ SCP+CR  P
Sbjct: 329 GSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNP 372

[Close]

BLAST of CsaV3_3G027940 vs. TAIR10
Match: AT1G28040.1 (RING/U-box superfamily protein)

HSP 1 Score: 184.9 bits (468), Expect = 9.1e-47
Identity = 106/310 (34.19%), Postives = 161/310 (51.94%), Query Frame = 0


Query: 75  SGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPY 134
           SG F+V  I+Y+ Q+I ++DP NC+ +++L+    GSPF    +  +TF  C     IP 
Sbjct: 2   SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIPV 61

Query: 135 DFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSL------------ETY 194
            ++L  I CLS  + + FA+S+   +++L   C++VK + VP+ +             T 
Sbjct: 62  -WSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPVDVIYKDVITEEKGFSTV 121

Query: 195 SWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIG 254
            W    ++ L W  PNC+ CE     CG K  ++ E+  KY            R  I   
Sbjct: 122 PW--LGNVLLEWSSPNCRGCEKESLRCGFKNKASLEV--KYLADPPDETKSRLRPLI--- 181

Query: 255 VGVPVTMCVLGFLCCLC---------------ARVRSSTSGRNSSIEAHWVISSRPITMG 314
               +T+C++G +   C                R  ++ + RN++ +   V+    +T G
Sbjct: 182 ----ITLCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPRGVV----VTTG 241

Query: 315 LDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWL 358
           LD  TI+SY K+ LGES RLP     ICPICLSEY  KETV+ +P+C H FH  CIDEWL
Sbjct: 242 LDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWL 295

[Close]

BLAST of CsaV3_3G027940 vs. Swiss-Prot
Match: sp|P0CH01|AT21A_ARATH (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-56
Identity = 132/352 (37.50%), Postives = 194/352 (55.11%), Query Frame = 0


Query: 27  CLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYK 86
           C  S+C      +RFPF + ++QP+ CG+  F+L C  S +  + LP SG F+V+ IDY 
Sbjct: 26  CSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPKTALKLPNSGTFLVREIDYL 85

Query: 87  NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSG 146
           +Q+I + DP NCL RK+L+  +  SPF A   V +TF +C   +E+      + I CL  
Sbjct: 86  SQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSC--PNEVAKSSRFDSIPCLGN 145

Query: 147 LSYAVFASSSSMVNEILSSRCELVKTVSVPMSLET------YSWDLRN-DLRLGWKKPNC 206
            + +  A++S  + + +   C++VKT+ VP+S         +S D+ + DL L W  P+C
Sbjct: 146 STTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLKWDSPSC 205

Query: 207 KKCELNGGICGIKPNSTNEIQC------KYNTSTQSGMARGARYAISIGVGVPVTMCVLG 266
             CE +   CG + N++ +++C       YNT  Q          I + +  P+T+    
Sbjct: 206 SDCERDFLRCGFRSNTSLQVKCFPFENSGYNTEPQ------VLKIILLSIIGPLTIFATC 265

Query: 267 FLCCLCARVR-SSTSGRNSSIEA---HWVISSRPITMGLDGPTIDSYPKIVLGESLRLPK 326
               +C   R +S   RN +I A   + VI    +T GLD   I+SY K  LGES RLP 
Sbjct: 266 IAVGVCTSERFASLIQRNVAIAALQPNEVI----VTTGLDESIIESYKKTELGESRRLPG 325

Query: 327 PTDNI-CPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 361
             D+I CPICLSEY  KETV+ IP+C H FH +CID WL+++ SCPLCR  P
Sbjct: 326 NNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSP 365

[Close]

BLAST of CsaV3_3G027940 vs. Swiss-Prot
Match: sp|P0CH02|AT21B_ARATH (Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana OX=3702 GN=ATL21B PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-54
Identity = 118/328 (35.98%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 39  IRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNC 98
           IRFPF         C +P F+L C      ++ LP SG F VQYIDY+ Q+I++NDP NC
Sbjct: 46  IRFPF---------CDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENC 105

Query: 99  LPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSM 158
           L +++L+  + GSPF  +    +TF  C     +P  +    I CLS  + + FA+S+  
Sbjct: 106 LAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWY--PSIPCLSNSTSSFFATSNFA 165

Query: 159 VNEILSSRCELVKTVSVPMS---LET-YSWDLRNDLRLGWKKPNCKKCELNGGICGIKPN 218
           + E +   C++VK + VP      ET +S  L   L L W  PNC+ CE++   CG K  
Sbjct: 166 LAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNK 225

Query: 219 STNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSI- 278
           ++ E++C +       ++R     +++ + + +   V+ F+ C+  R+ ++   R+ ++ 
Sbjct: 226 ASPEVKC-FGAKKSGHLSRA---VVAVLICLSIIGAVILFVTCIAIRIHNTPRRRHWAVP 285

Query: 279 EAHWVISSRP----ITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKETVK 338
            A   +  +P     T GLD  TI+ Y  + LGES R P     +CPICLSEY  KETV+
Sbjct: 286 AAAATVMQQPREVMATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVR 345

Query: 339 TIPQCQHFFHQDCIDEWLRLNPSCPLCR 358
            IP+C H FH  CID WL+++ SCPLCR
Sbjct: 346 FIPECDHCFHAKCIDVWLKIHGSCPLCR 358

[Close]

BLAST of CsaV3_3G027940 vs. Swiss-Prot
Match: sp|Q9SKK8|ATL22_ARATH (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 8.1e-53
Identity = 128/352 (36.36%), Postives = 183/352 (51.99%), Query Frame = 0


Query: 27  CLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYK 86
           C   +C+      RFPF + + QP+SCGY  F+L C       + LP S  F+V+ IDY+
Sbjct: 29  CYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDDANTTLKLPKSEPFLVKEIDYE 88

Query: 87  NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSG 146
            Q I +NDP NCL R++L+    GSPF    + ++TF  C     I   F    I CL  
Sbjct: 89  TQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKEANITASF--RAIDCLGN 148

Query: 147 LSYAVFASSSSMVNEILSSRCELVKTVSVPMS----LETYSWDLRN--DLRLGWKKPNCK 206
            + + F      +  + SS C + K + +P S      TY  D +N  D+ L W  P+C+
Sbjct: 149 TTSSFFVVQFENLGSMPSS-CHIFKILPLPFSWFVAYTTYP-DGQNSRDMWLKWDSPDCR 208

Query: 207 KCE-LNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISI------GVGVPVTMCVLG 266
            CE      CG K N++++++C   +S   G+       + I      G    +T CV G
Sbjct: 209 DCERRTNSRCGFKNNTSHQVEC--FSSVNPGLHNTGLQVLKIMCLSLVGPLTALTFCV-G 268

Query: 267 FLCCLCARVRSSTSGRNSSIEAHWVISSRP----ITMGLDGPTIDSYPKIVLGESLRLPK 326
            + C   RV SS   +         ++S+P      +GLD  TI+SY K+ LGES RLP 
Sbjct: 269 LVMCSSERV-SSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESRRLPT 328

Query: 327 -PTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 361
              D +CPICLSEY  KETV+ +P+C+H FH +CID WL+L+ SCP+CR  P
Sbjct: 329 GSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNP 372

[Close]

BLAST of CsaV3_3G027940 vs. Swiss-Prot
Match: sp|Q9C7E9|ATL20_ARATH (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-45
Identity = 106/310 (34.19%), Postives = 161/310 (51.94%), Query Frame = 0


Query: 75  SGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPY 134
           SG F+V  I+Y+ Q+I ++DP NC+ +++L+    GSPF    +  +TF  C     IP 
Sbjct: 2   SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIPV 61

Query: 135 DFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSL------------ETY 194
            ++L  I CLS  + + FA+S+   +++L   C++VK + VP+ +             T 
Sbjct: 62  -WSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPVDVIYKDVITEEKGFSTV 121

Query: 195 SWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIG 254
            W    ++ L W  PNC+ CE     CG K  ++ E+  KY            R  I   
Sbjct: 122 PW--LGNVLLEWSSPNCRGCEKESLRCGFKNKASLEV--KYLADPPDETKSRLRPLI--- 181

Query: 255 VGVPVTMCVLGFLCCLC---------------ARVRSSTSGRNSSIEAHWVISSRPITMG 314
               +T+C++G +   C                R  ++ + RN++ +   V+    +T G
Sbjct: 182 ----ITLCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPRGVV----VTTG 241

Query: 315 LDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWL 358
           LD  TI+SY K+ LGES RLP     ICPICLSEY  KETV+ +P+C H FH  CIDEWL
Sbjct: 242 LDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWL 295

[Close]

BLAST of CsaV3_3G027940 vs. Swiss-Prot
Match: sp|P0CH03|AT21C_ARATH (Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana OX=3702 GN=ATL21C PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.3e-44
Identity = 118/330 (35.76%), Postives = 173/330 (52.42%), Query Frame = 0


Query: 39  IRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNC 98
           IRFPF         C +  F+L C    + ++ LP SG F+V+ IDY+ Q+I++NDP NC
Sbjct: 46  IRFPF---------CNHARFNLHCTDLNKTVLELPMSGTFLVRDIDYRRQKIYINDP-NC 105

Query: 99  LPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSM 158
           L +++L+  + GSPF     + +TF +C     +P  +    I CLS  + + FA+S+  
Sbjct: 106 LAKRLLTFNISGSPFSPHFDILYTFLSCPNEVVLPSWY--PSIPCLSNSTSSFFATSNYS 165

Query: 159 VNEILSSRCELVKTVSVPMSL---ET-YSWDLRN-DLRLGWKKPNCK-KCELNGGICGIK 218
           + + +   C++VK + VP +    ET +S DL N  L L W  P+C+ KC       G  
Sbjct: 166 LAQSMLPSCQIVKRLHVPATSPFGETRFSSDLNNQSLLLEWALPDCRAKCLGATKKTGTI 225

Query: 219 PNSTNEIQCKYNTSTQS-GMARGARYAISIGVGVPVTMCVLGFLCCLCARVRSSTSGRNS 278
            NS N   C ++    S  +      +  + V V     V  F+   C  +R   S R  
Sbjct: 226 YNS-NIFSCSFSFLYDSRELFINGNLSSGVLVLVISLSAVTVFVFPTCIAIRLYDSERFD 285

Query: 279 SIEAHWVISSRP----ITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKET 338
           S  A   +  +P       GLD  TI+++ K+ LGES RL      +CPICLSEY  KET
Sbjct: 286 SAIAAATVMQQPREVMARRGLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKET 345

Query: 339 VKTIPQCQHFFHQDCIDEWLRLNPSCPLCR 358
           V+ IP+C H FH +CID WL+++ SCPLCR
Sbjct: 346 VRFIPECDHCFHVECIDVWLKIHGSCPLCR 362

[Close]

BLAST of CsaV3_3G027940 vs. TrEMBL
Match: tr|A0A0A0LC42|A0A0A0LC42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603590 PE=4 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 6.4e-220
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60
           MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL
Sbjct: 1   MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60

Query: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120
           TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD
Sbjct: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120

Query: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180
           FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE
Sbjct: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180

Query: 181 TYSWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAIS 240
           TYSWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAIS
Sbjct: 181 TYSWDLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAIS 240

Query: 241 IGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIV 300
           IGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIV
Sbjct: 241 IGVGVPVTMCVLGFLCCLCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIV 300

Query: 301 LGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 360
           LGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP
Sbjct: 301 LGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 360

Query: 361 LKSPPSHFPL 371
           LKSPPSHFPL
Sbjct: 361 LKSPPSHFPL 370

[Close]

BLAST of CsaV3_3G027940 vs. TrEMBL
Match: tr|A0A1S3B3U1|A0A1S3B3U1_CUCME (RING-H2 finger protein ATL20-like OS=Cucumis melo OX=3656 GN=LOC103485700 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 2.1e-202
Identity = 345/373 (92.49%), Postives = 353/373 (94.64%), Query Frame = 0


Query: 1   MLHNRLLVPCFLXXXXXXNLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDL 60
           MLH  LL PC  XXXXXXNLTTTSELC DSTCNG+FQTIRFPFRIQN+QPKSCGYP FDL
Sbjct: 2   MLHYHLLFPCXXXXXXXXNLTTTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDL 61

Query: 61  TCHPSGQPLIHLPFSGEFIVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 120
           TCHP+GQPLIHLP SGEFIVQYIDY+NQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD
Sbjct: 62  TCHPTGQPLIHLPLSGEFIVQYIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVD 121

Query: 121 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLE 180
           FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVN ILSSRCELVKTVSVPMS E
Sbjct: 122 FTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSE 181

Query: 181 TYSW--DLRNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYA 240
           +YSW  DLRNDLRL WKKPNCKKCELNGG+CGIKPNSTNEIQCKYNTST SGM RGARYA
Sbjct: 182 SYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPSGMPRGARYA 241

Query: 241 ISIGVGVPVTMCVLGFLCCLCARVR-SSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYP 300
           ISIGVGVP TMCVLGFLCC CARVR SST GRNSSIEAHWVISSRPITMGLDGPTIDSYP
Sbjct: 242 ISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRPITMGLDGPTIDSYP 301

Query: 301 KIVLGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCR 360
           KIVLGESLRLPKP+DNICPICLSEYRPKETVKTIPQC+HFFHQDCIDEWLRLNPSCPLCR
Sbjct: 302 KIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCIDEWLRLNPSCPLCR 361

Query: 361 MPPLKSPPSHFPL 371
           MPPLKSPPS FPL
Sbjct: 362 MPPLKSPPSDFPL 374

[Close]

BLAST of CsaV3_3G027940 vs. TrEMBL
Match: tr|A0A1S3B3D1|A0A1S3B3D1_CUCME (putative RING-H2 finger protein ATL21A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485698 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.7e-111
Identity = 202/352 (57.39%), Postives = 253/352 (71.88%), Query Frame = 0


Query: 19  NLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEF 78
           NL TTSELC DS C G +QTIRFPFRI N QPKSCGYP FDL+CHP+G+ L+HLP SG+F
Sbjct: 12  NLATTSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGETLLHLPPSGDF 71

Query: 79  IVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNL 138
           IVQ IDY +QEI +NDP+NCLP+KILSL L GSPF  KN+  F F+NCS S  +PY + +
Sbjct: 72  IVQTIDYMHQEIRINDPDNCLPKKILSLNLSGSPFVKKNSQSFAFYNCS-SSYMPY-WYI 131

Query: 139 NPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPN 198
           +PI CLS LSY V+ASSS ++  +  S C ++KTVSVP S  +YS  L +DL L W+ P+
Sbjct: 132 DPIYCLSSLSYTVYASSSPLLINMFESNCVMIKTVSVPSS-SSYSSKLWDDLLLKWENPD 191

Query: 199 CKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVG-VPVTMCVLGFLCC 258
           C +CE  G  C +K NS+N IQC    +   G +R     +SI +G V   +C LG LCC
Sbjct: 192 CGRCESIGQRCELKSNSSNGIQC----TNSQGRSRVGANVVSIAMGVVAAVICFLGLLCC 251

Query: 259 LCARVRSSTSGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPI 318
           LC ++    +  NSS  AHW++SS+    GL+G TIDSYPK VL ESL LPKP +N+CPI
Sbjct: 252 LCFKINFRRTRSNSSNIAHWIVSSQ----GLNGLTIDSYPKFVLDESLSLPKPNNNVCPI 311

Query: 319 CLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPPLKSPPSHFP 370
           CL++YRPKE VK+IP CQH FH+ CIDEWLRL  SCP+CR  PL++PPS+ P
Sbjct: 312 CLAQYRPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPLEAPPSNPP 352

[Close]

BLAST of CsaV3_3G027940 vs. TrEMBL
Match: tr|A0A0A0L8U8|A0A0A0L8U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603600 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 201/351 (57.26%), Postives = 252/351 (71.79%), Query Frame = 0


Query: 19  NLTTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEF 78
           NL T+SELC DS C G +QTIRFPFRI N QPKSCGYP FDL+CHP+G+PL+HLP SG+F
Sbjct: 14  NLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGEPLLHLPHSGDF 73

Query: 79  IVQYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNL 138
           IVQ IDY +QEI +NDP+ CLP+KIL L L GSPF  KN+    FFNCS S+ IPY +N 
Sbjct: 74  IVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS-SNYIPYWYN- 133

Query: 139 NPISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPN 198
           +PI CLS  S+ V+ASSS M+  +  S C ++KTVSVP S  +YS +L   L L W+ P+
Sbjct: 134 DPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSF-SYSSNLWEYLLLKWENPD 193

Query: 199 CKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVG-VPVTMCVLGFLCC 258
           C +CE  G  C +K NS+NEIQC    +   G +R     +SI +G V   +C LG LCC
Sbjct: 194 CGRCESVGQRCEVKSNSSNEIQC----TDSQGRSRVGANVVSIAMGVVAAVICFLGVLCC 253

Query: 259 LCARVRSSTSGRNSSIEAHWVISS-RPITMGLDGPTIDSYPKIVLGESLRLPKPTDNICP 318
           LC ++     G +SSI AHW +SS R  TMGL+G TI+SYPK VL ESL LPKP +N+CP
Sbjct: 254 LCFKINFRRRGSSSSI-AHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPNNNVCP 313

Query: 319 ICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPPLKSPPSH 368
           ICL++Y+PKE VK+IP CQH FH+ CIDEWLRL  SCP+CR  P+++PPS+
Sbjct: 314 ICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSN 356

[Close]

BLAST of CsaV3_3G027940 vs. TrEMBL
Match: tr|A0A061G8Y3|A0A061G8Y3_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015374 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.1e-105
Identity = 190/345 (55.07%), Postives = 242/345 (70.14%), Query Frame = 0


Query: 21  TTTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIV 80
           TT+++ C+ + C  +   IRFPFRI+ +Q KSCGYP F L+C  S Q ++ LP+SG+F V
Sbjct: 25  TTSTDTCIRAACRSTKPEIRFPFRIEGRQSKSCGYPGFHLSCDSSNQTILELPYSGKFSV 84

Query: 81  QYIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNP 140
           Q IDY  QEIW+NDPNNCLP++IL L L GSPF+  N   FTFFNCS  D + Y F  NP
Sbjct: 85  QGIDYAAQEIWINDPNNCLPQRILWLNLSGSPFNGVNYQKFTFFNCS-LDYLKYGF--NP 144

Query: 141 ISCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSW----DLRNDLRLGWKK 200
           I+CLSG +Y VFA+SS+ V   LSS C+ V TV+VP+   ++      DL N+LRL W K
Sbjct: 145 IACLSGGNYTVFATSSTKVVSSLSSSCQRVTTVAVPVEWASHDQILKSDLSNNLRLTWDK 204

Query: 201 PNCKKCELNGGICGIKPNSTNEIQCKYNTSTQSGMARGARYAISIGVGVPVTMCVLGFLC 260
           P C+KCE  GG C +K NST +  C  + +   G+ R  RYAI++G GVP  +C+LG LC
Sbjct: 205 PKCRKCESRGGECRLKANSTRQTIC--SNAPGRGITRSVRYAITVGAGVPTLLCILGLLC 264

Query: 261 CLCARVRSSTSGRNSSIEAHWVISSRP-ITMGLDGPTIDSYPKIVLGESLRLPKPTDNIC 320
            +C +V+S T  RNS  E +  ++ +P I  GLDGPTI+SYPKIV+GES RLPKP DN C
Sbjct: 265 FVCGKVQSCTVRRNSIPELNATVAPQPTIEDGLDGPTIESYPKIVIGESRRLPKPDDNTC 324

Query: 321 PICLSEYRPKETVKTIPQCQHFFHQDCIDEWLRLNPSCPLCRMPP 361
           PICL EY PKET+++IPQCQH FH DCIDEWLRLN +CP+CR  P
Sbjct: 325 PICLCEYWPKETLRSIPQCQHCFHADCIDEWLRLNATCPICRNSP 364

The following BLAST results are available for this feature:

BLAST of CsaV3_3G027940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651602.1	9.6e-220	100.00	PREDICTED: RING-H2 finger protein ATL20-like [Cucumis sativus] >KGN58272.1 hypot...	[more]
XP_008441618.1	3.1e-202	92.49	PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo]	[more]
XP_023553169.1	2.0e-161	77.97	RING-H2 finger protein ATL22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922932.1	6.6e-160	77.68	RING-H2 finger protein ATL22-like [Cucurbita moschata]	[more]
XP_022984777.1	3.6e-158	76.81	RING-H2 finger protein ATL22-like [Cucurbita maxima]	[more]

BLAST of CsaV3_3G027940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53110.1	1.8e-90	50.29	RING/U-box superfamily protein	[more]
AT2G46495.1	6.7e-58	37.50	RING/U-box superfamily protein	[more]
AT2G46494.1	6.3e-56	35.98	RING/U-box superfamily protein	[more]
AT2G25410.1	4.5e-54	36.36	RING/U-box superfamily protein	[more]
AT1G28040.1	9.1e-47	34.19	RING/U-box superfamily protein	[more]

BLAST of CsaV3_3G027940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CH01\|AT21A_ARATH	1.2e-56	37.50	Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A...	[more]
sp\|P0CH02\|AT21B_ARATH	1.1e-54	35.98	Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana OX=3702 GN=ATL21B...	[more]
sp\|Q9SKK8\|ATL22_ARATH	8.1e-53	36.36	RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2	[more]
sp\|Q9C7E9\|ATL20_ARATH	1.6e-45	34.19	RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2	[more]
sp\|P0CH03\|AT21C_ARATH	5.3e-44	35.76	Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana OX=3702 GN=ATL21C...	[more]

BLAST of CsaV3_3G027940 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LC42\|A0A0A0LC42_CUCSA	6.4e-220	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603590 PE=4 SV=1	[more]
tr\|A0A1S3B3U1\|A0A1S3B3U1_CUCME	2.1e-202	92.49	RING-H2 finger protein ATL20-like OS=Cucumis melo OX=3656 GN=LOC103485700 PE=4 S...	[more]
tr\|A0A1S3B3D1\|A0A1S3B3D1_CUCME	3.7e-111	57.39	putative RING-H2 finger protein ATL21A isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0L8U8\|A0A0A0L8U8_CUCSA	2.7e-109	57.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603600 PE=4 SV=1	[more]
tr\|A0A061G8Y3\|A0A061G8Y3_THECC	3.1e-105	55.07	RING/U-box superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_01537...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0030247	polysaccharide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR025287	WAK_GUB
IPR032872	WAK_assoc_C
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G027940.1	CsaV3_3G027940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 315..356 e-value: 1.8E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 314..357 e-value: 1.7E-13 score: 50.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 315..357 score: 12.873
IPR032872	Wall-associated receptor kinase, C-terminal	PFAM	PF14380	WAK_assoc	coord: 176..224 e-value: 2.2E-7 score: 31.4
IPR025287	Wall-associated receptor kinase, galacturonan-binding domain	PFAM	PF13947	GUB_WAK_bind	coord: 30..96 e-value: 4.1E-7 score: 30.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 284..361 e-value: 9.3E-19 score: 68.9
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 12..361
None	No IPR available	PANTHER	PTHR14155:SF444	RING-H2 FINGER PROTEIN ATL21A-RELATED	coord: 12..361
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 309..361

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G027940	CSPI03G26480	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G027940	Cucsa.040640	Cucumber (Gy14) v1	cgycucB016
CsaV3_3G027940	CmaCh16G000600	Cucurbita maxima (Rimu)	cmacucB0378
CsaV3_3G027940	Cp4.1LG14g06660	Cucurbita pepo (Zucchini)	cpecucB0253
CsaV3_3G027940	CsGy3G024720	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G027940	Carg15073	Silver-seed gourd	carcucB1031
CsaV3_3G027940	ClCG05G008830	Watermelon (Charleston Gray)	cucwcgB247
CsaV3_3G027940	Lsi05G000890	Bottle gourd (USVL1VR-Ls)	cuclsiB238
CsaV3_3G027940	MELO3C008479.2	Melon (DHL92) v3.6.1	cucmedB196
CsaV3_3G027940	Cla97C05G091090	Watermelon (97103) v2	cucwmbB226
CsaV3_3G027940	Bhi01G001100	Wax gourd	cucwgoB297

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G027940	Cucurbita maxima (Rimu)	cmacucB0492
CsaV3_3G027940	Cucurbita moschata (Rifu)	cmocucB0481
CsaV3_3G027940	Cucurbita pepo (Zucchini)	cpecucB0038
CsaV3_3G027940	Watermelon (97103) v1	cucwmB263