CmoCh16G000660 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G000660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRing finger protein, putative
LocationCmo_Chr16 : 300577 .. 303252 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCATATGGTCTCTTCTATCATGTTGATAGGTGTTTCTAAAATCCCCCCCCCCCCCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAACCCCCCCCCCCCCCTTTTCTATGTTATAGATAGTTGGCCCTGTTTTCACAAAGATGAATAATGTACAGTTGGCTCAATCTTTTGGTTATATTGTTATTGGTTGTTGGCAAGTTAAAATGTTCTTGCTTGCCCTCTGAAGTTAATGTAATCTTCACATCAGAATTTTCCTTCCAACCTTGTGACCTATTTGGCTTGTTCAAAGTTGTATCTTTTAACCCAATTCCTTTTTGACTGATTCTTAAGATCATCTTCTCAATTACCATTCTCTCAAAACAGCTATAAGTTCTATATTACTATTGGGAATGAACGAGGAAAGGTCTAGGAGTATGATTAGTGCAACAATACCCAACGGTGCCTTGATGAGTTTTCAAACCTTTCACTTTCTATTTTATAAAGTATATCTTACCTTATCAGTTGAGCTCTTTGGAAGTTGATATAATAATGAAACCTCCATATTTGTTTATTGTACTCAAAAGAAACTTTTAATATCAATGACATATCTTAATGACGACATCCAAAGTTCCATATTTGTTTAATTGTAGCATCAAAGAAAACATCAAATTTTTGTATGAGTTATTCTATTTTATTGCACTCGAGTTGACCTACTGCTAACTCTTTGATCAGGTCCTTCTTCAACATAATCTCCCAAAGGGGAAAGGAAAAACACTTCCCTCAAATCATCAAACCATGGTACAAACCATTAGACTTCATCAATACTCTTTCTCTACGTCGATACGATATATTGGTTTAGAAAATAAAAACTTGACTTGTTCTTTGTTGCTTTGTTGTCATTGTCCTAAGATCACATCATATGGAGCTTTCTTGGCGCCCACCAATCATGCTTCATTCAATAGCGTTATATTTGACTTTTAAGCTTAGTTAATGCCATTTGTTTCGTTGGAACAACCCAATTCTTTTTGAGTGTGGAAACAAGTTTCCTCTTTTTTCTTTTTTTTTTTTTGGAAAGAATATATAAATTTACGAGCAATGTTGTGTAATGGCCTTCCACCCATTAACATAGCTCCTTTAAGAAATGCTTCTTTTTCTCCTCTTGCTCTGTTTACTCTGTTTCCTCTGTTTGTTCAGCCCTGCATCCACCTCTGAACTCTGTTTCCACTCCAGCTGCAATGGTGATTTTCAAACCATTCAATTCCCTTTCAGAATTGAAAACCAACAGCCCAAATCATGCGGGTATCCAGGCTTTGATTTGACCTGCCCCTCCACAGGTCAACCACTCCTCCATCTTCCTTCTTCAGGGGATTTCACTGTTCAGTACATAGATTACGAGAACCAAGAAATTTTGGTCAATGATCCAAACAAATGTCTTCCCCGAAAGATTCTGTCTCTCGAGCTTTCTGGGTCGCCGTTTCATGCCACAAATAGTGAAGATTTCACCTTCTTTAATTGTTCGTGGAGTGATCCAATCCCATCTGAGTTTAACTTGAATCCAATATATTGCCTCAGTGGGTTGTCGTATGCAGTTTTCGCATCACCTTCTTCATTTGTAAATGAGATTTTGTCGTCGAGTTGTGTTGCGATGAAGACTGTATCGGTGCCGTATTCATGGTCGTTTTCGGCGGATTTGACGAATGATCTTCGATTGGGGTGGAAAAAGCCTAATTGTAGAAGGTGCGAGTCACAGGGTGGAATATGTGGCCTCGCACCCAATTCTACCGATCAAATCCAATGCAAACACAGTGCTCAACCTCGACATGGTATGCTTTCACTTCTCCCTCTACCTCCCTTTAGTGCTTTCAACATTTTACAAAAGAACCCACCTTGTAAATTTCAAACACCTTACAAGTATGGATGTTCATATAGGAGTGTGTGA

mRNA sequence

ATGGCTTCATATGGTCTCTTCTATCATGTTGATAGCCCTGCATCCACCTCTGAACTCTGTTTCCACTCCAGCTGCAATGGTGATTTTCAAACCATTCAATTCCCTTTCAGAATTGAAAACCAACAGCCCAAATCATGCGGGTATCCAGGCTTTGATTTGACCTGCCCCTCCACAGGTCAACCACTCCTCCATCTTCCTTCTTCAGGGGATTTCACTGTTCAGTACATAGATTACGAGAACCAAGAAATTTTGGTCAATGATCCAAACAAATGTCTTCCCCGAAAGATTCTGTCTCTCGAGCTTTCTGGGTCGCCGTTTCATGCCACAAATAGTGAAGATTTCACCTTCTTTAATTGTTCGTGGAGTGATCCAATCCCATCTGAGTTTAACTTGAATCCAATATATTGCCTCAGTGGGTTGTCGTATGCAGTTTTCGCATCACCTTCTTCATTTGTAAATGAGATTTTGTCGTCGAGTTGTGTTGCGATGAAGACTGTATCGGTGCCGTATTCATGGTCGTTTTCGGCGGATTTGACGAATGATCTTCGATTGGGGTGGAAAAAGCCTAATTGTAGAAGGTGCGAGTCACAGGGTGGAATATGTGGCCTCGCACCCAATTCTACCGATCAAATCCAATGCAAACACAGTGCTCAACCTCGACATGGTATGCTTTCACTTCTCCCTCTACCTCCCTTTAGTGCTTTCAACATTTTACAAAAGAACCCACCTTGTAAATTTCAAACACCTTACAAGTATGGATGTTCATATAGGAGTGTGTGA

Coding sequence (CDS)

ATGGCTTCATATGGTCTCTTCTATCATGTTGATAGCCCTGCATCCACCTCTGAACTCTGTTTCCACTCCAGCTGCAATGGTGATTTTCAAACCATTCAATTCCCTTTCAGAATTGAAAACCAACAGCCCAAATCATGCGGGTATCCAGGCTTTGATTTGACCTGCCCCTCCACAGGTCAACCACTCCTCCATCTTCCTTCTTCAGGGGATTTCACTGTTCAGTACATAGATTACGAGAACCAAGAAATTTTGGTCAATGATCCAAACAAATGTCTTCCCCGAAAGATTCTGTCTCTCGAGCTTTCTGGGTCGCCGTTTCATGCCACAAATAGTGAAGATTTCACCTTCTTTAATTGTTCGTGGAGTGATCCAATCCCATCTGAGTTTAACTTGAATCCAATATATTGCCTCAGTGGGTTGTCGTATGCAGTTTTCGCATCACCTTCTTCATTTGTAAATGAGATTTTGTCGTCGAGTTGTGTTGCGATGAAGACTGTATCGGTGCCGTATTCATGGTCGTTTTCGGCGGATTTGACGAATGATCTTCGATTGGGGTGGAAAAAGCCTAATTGTAGAAGGTGCGAGTCACAGGGTGGAATATGTGGCCTCGCACCCAATTCTACCGATCAAATCCAATGCAAACACAGTGCTCAACCTCGACATGGTATGCTTTCACTTCTCCCTCTACCTCCCTTTAGTGCTTTCAACATTTTACAAAAGAACCCACCTTGTAAATTTCAAACACCTTACAAGTATGGATGTTCATATAGGAGTGTGTGA
Homology
[Close]
BLAST of CmoCh16G000660 vs. Swiss-Prot
Match: ATL22_ARATH (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31
Identity = 76/221 (34.39%), Postives = 111/221 (50.23%), Query Frame = 1 

Query: 6   LFYHVDSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHL 65
           LF+     AS  + C+  SC+ +    +FPF + + QP+SCGY GF+L C       L L
Sbjct: 15  LFFFPLLNASEQKPCYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDDANTTLKL 74

Query: 66  PSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPI 125
           P S  F V+ IDYE Q I +NDP  CL R++L+ + SGSPF    S ++TF  C     I
Sbjct: 75  PKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKEANI 134

Query: 126 PSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFS------ADLT 185
            + F    I CL   + + F      +   + SSC   K + +P+SW  +         +
Sbjct: 135 TASF--RAIDCLGNTTSSFFVVQFENLGS-MPSSCHIFKILPLPFSWFVAYTTYPDGQNS 194

Query: 186 NDLRLGWKKPNCRRCESQ-GGICGLAPNSTDQIQCKHSAQP 220
            D+ L W  P+CR CE +    CG   N++ Q++C  S  P
Sbjct: 195 RDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVECFSSVNP 232

[Close]
BLAST of CmoCh16G000660 vs. Swiss-Prot
Match: AT21A_ARATH (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.7e-30
Identity = 73/208 (35.10%), Postives = 114/208 (54.81%), Query Frame = 1 

Query: 14  ASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTV 73
           AS  + C  SSC  D   ++FPF + ++QP+ CG+ GF+L C ++ +  L LP+SG F V
Sbjct: 20  ASHPQQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPKTALKLPNSGTFLV 79

Query: 74  QYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNP 133
           + IDY +Q+I + DP  CL RK+L+ ++S SPF A     +TF +C   + +      + 
Sbjct: 80  REIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSC--PNEVAKSSRFDS 139

Query: 134 IYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYS-------WSFSADLTN-DLRLG 193
           I CL   + +  A+ S  + + +  SC  +KT+ VP S         FS D+ + DL L 
Sbjct: 140 IPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLK 199

Query: 194 WKKPNCRRCESQGGICGLAPNSTDQIQC 214
           W  P+C  CE     CG   N++ Q++C
Sbjct: 200 WDSPSCSDCERDFLRCGFRSNTSLQVKC 225

[Close]
BLAST of CmoCh16G000660 vs. Swiss-Prot
Match: AT21B_ARATH (Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana GN=ATL21B PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 67/195 (34.36%), Postives = 98/195 (50.26%), Query Frame = 1 

Query: 32  IQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQYIDYENQEILVNDPNKC 91
           I+FPF         C +P F+L C +    +L LP SG F VQYIDY  Q+I +NDP  C
Sbjct: 46  IRFPF---------CDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENC 105

Query: 92  LPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPIYCLSGLSYAVFASPSSF 151
           L +++L+  +SGSPF       +TF  C     +PS +   P  CLS  + + FA+ +  
Sbjct: 106 LAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWYPSIP--CLSNSTSSFFATSNFA 165

Query: 152 VNEILSSSCVAMKTVSVP-----YSWSFSADLTNDLRLGWKKPNCRRCESQGGICGLAPN 211
           + E +  SC  +K + VP         FS+ L   L L W  PNCR CE     CG    
Sbjct: 166 LAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNK 225

Query: 212 STDQIQCKHSAQPRH 222
           ++ +++C  + +  H
Sbjct: 226 ASPEVKCFGAKKSGH 229

[Close]
BLAST of CmoCh16G000660 vs. Swiss-Prot
Match: AT21C_ARATH (Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana GN=ATL21C PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-18
Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 1 

Query: 32  IQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQYIDYENQEILVNDPNKC 91
           I+FPF         C +  F+L C    + +L LP SG F V+ IDY  Q+I +NDPN C
Sbjct: 46  IRFPF---------CNHARFNLHCTDLNKTVLELPMSGTFLVRDIDYRRQKIYINDPN-C 105

Query: 92  LPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPIYCLSGLSYAVFASPSSF 151
           L +++L+  +SGSPF       +TF +C     +PS +   P  CLS  + + FA+ +  
Sbjct: 106 LAKRLLTFNISGSPFSPHFDILYTFLSCPNEVVLPSWYPSIP--CLSNSTSSFFATSNYS 165

Query: 152 VNEILSSSCVAMKTVSVPYS-----WSFSADLTN-DLRLGWKKPNCR 193
           + + +  SC  +K + VP +       FS+DL N  L L W  P+CR
Sbjct: 166 LAQSMLPSCQIVKRLHVPATSPFGETRFSSDLNNQSLLLEWALPDCR 200

[Close]
BLAST of CmoCh16G000660 vs. Swiss-Prot
Match: ATL20_ARATH (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 4.6e-15
Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 1 

Query: 68  SGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPS 127
           SG F V  I+Y+ Q+I ++DP  C+ +++L+   SGSPF    S  +TF  C     IP 
Sbjct: 2   SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIP- 61

Query: 128 EFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFSADLTND------ 187
            ++L  I CLS  + + FA+ +   +++L  SC  +K + VP    +   +T +      
Sbjct: 62  VWSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPVDVIYKDVITEEKGFSTV 121

Query: 188 -----LRLGWKKPNCRRCESQGGICGLAPNSTDQIQCKHSAQP 220
                + L W  PNCR CE +   CG    ++  ++ K+ A P
Sbjct: 122 PWLGNVLLEWSSPNCRGCEKESLRCGFKNKAS--LEVKYLADP 161

[Close]
BLAST of CmoCh16G000660 vs. TrEMBL
Match: A0A0A0LC42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603590 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.0e-86
Identity = 153/210 (72.86%), Postives = 174/210 (82.86%), Query Frame = 1 

Query: 15  STSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQ 74
           +TSELC  S+CNG FQTI+FPFRI+NQQPKSCGYP FDLTC  +GQPL+HLP SG+F VQ
Sbjct: 22  TTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQ 81

Query: 75  YIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPI 134
           YIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFTFFNCS SD IP +FNLNPI
Sbjct: 82  YIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPI 141

Query: 135 YCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSW-SFSADLTNDLRLGWKKPNCRR 194
            CLSGLSYAVFAS SS VNEILSS C  +KTVSVP S  ++S DL NDLRLGWKKPNC++
Sbjct: 142 SCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPNCKK 201

Query: 195 CESQGGICGLAPNSTDQIQCKHSAQPRHGM 224
           CE  GGICG+ PNST++IQCK++   + GM
Sbjct: 202 CELNGGICGIKPNSTNEIQCKYNTSTQSGM 231

[Close]
BLAST of CmoCh16G000660 vs. TrEMBL
Match: A0A0A0L8U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603600 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-61
Identity = 121/211 (57.35%), Postives = 153/211 (72.51%), Query Frame = 1 

Query: 6   LFYHVDSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHL 65
           LF+   + A++SELCF S C GD+QTI+FPFRI N QPKSCGYPGFDL+C  TG+PLLHL
Sbjct: 8   LFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGEPLLHL 67

Query: 66  PSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPI 125
           P SGDF VQ IDY +QEI +NDP+ CLP+KIL L LSGSPF   NS+   FFNCS S+ I
Sbjct: 68  PHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS-SNYI 127

Query: 126 PSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFSADLTNDLRLG 185
           P  +N +PIYCLS  S+ V+AS S  +  +  S+C  +KTVSVP S+S+S++L   L L 
Sbjct: 128 PYWYN-DPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWEYLLLK 187

Query: 186 WKKPNCRRCESQGGICGLAPNSTDQIQCKHS 217
           W+ P+C RCES G  C +  NS+++IQC  S
Sbjct: 188 WENPDCGRCESVGQRCEVKSNSSNEIQCTDS 216

[Close]
BLAST of CmoCh16G000660 vs. TrEMBL
Match: A0A061G8Y3_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015374 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.9e-53
Identity = 106/207 (51.21%), Postives = 138/207 (66.67%), Query Frame = 1 

Query: 15  STSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQ 74
           ++++ C  ++C      I+FPFRIE +Q KSCGYPGF L+C S+ Q +L LP SG F+VQ
Sbjct: 26  TSTDTCIRAACRSTKPEIRFPFRIEGRQSKSCGYPGFHLSCDSSNQTILELPYSGKFSVQ 85

Query: 75  YIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPI 134
            IDY  QEI +NDPN CLP++IL L LSGSPF+  N + FTFFNCS       ++  NPI
Sbjct: 86  GIDYAAQEIWINDPNNCLPQRILWLNLSGSPFNGVNYQKFTFFNCSLD---YLKYGFNPI 145

Query: 135 YCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWS-----FSADLTNDLRLGWKKP 194
            CLSG +Y VFA+ S+ V   LSSSC  + TV+VP  W+       +DL+N+LRL W KP
Sbjct: 146 ACLSGGNYTVFATSSTKVVSSLSSSCQRVTTVAVPVEWASHDQILKSDLSNNLRLTWDKP 205

Query: 195 NCRRCESQGGICGLAPNSTDQIQCKHS 217
            CR+CES+GG C L  NST Q  C ++
Sbjct: 206 KCRKCESRGGECRLKANSTRQTICSNA 229

[Close]
BLAST of CmoCh16G000660 vs. TrEMBL
Match: A0A059DFG9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01473 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 108/223 (48.43%), Postives = 142/223 (63.68%), Query Frame = 1 

Query: 6   LFYHVDSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHL 65
           LF+ +    ++++ C  + C+ D   I FPFRI   QP+SCGYPGFDL+C    + +L L
Sbjct: 11  LFFFLLCTEASAKTCTPAFCHRDEPMIHFPFRIGTLQPESCGYPGFDLSCDGVNRTVLEL 70

Query: 66  PSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPI 125
           P+SG FTVQ IDY  QE+ VNDP  CLP+++LSL LSGSPF    S++FTFFNCS S   
Sbjct: 71  PNSGPFTVQGIDYAGQEMWVNDPEACLPKRLLSLNLSGSPFAGVYSQNFTFFNCSSS--- 130

Query: 126 PSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSF-----SADLTN 185
              + L+PI CLSG +Y VFA+ S +V   L SSC  +KTV VP  + F     S++L++
Sbjct: 131 YIRYGLDPIACLSGSNYRVFATSSPYVVNTLPSSCALVKTVPVPVEFPFFEQVISSNLSS 190

Query: 186 DLRLGWKKPNCRRCESQGGICGLAPNSTDQIQCKHSAQPRHGM 224
           DL L W  P C RC  +GG CGL  NST +IQC +  Q   G+
Sbjct: 191 DLPLQWGVPQCGRCVVRGGRCGLKGNSTTEIQCANVPQRVSGI 230

[Close]
BLAST of CmoCh16G000660 vs. TrEMBL
Match: A0A0D2P196_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G014700 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.1e-51
Identity = 110/221 (49.77%), Postives = 146/221 (66.06%), Query Frame = 1 

Query: 6   LFYHVDSPASTSELCFHSSCNGDFQT--IQFPFRIENQQPKSCGYPGFDLTCP-STGQPL 65
           +++ + S  ST + C  S C     +  I+FPFR+  +QPKSCG+PGFDL+C   + Q L
Sbjct: 11  VYFSLHSATSTMDPCTESVCQSTKSSPLIRFPFRLIGRQPKSCGFPGFDLSCNYKSTQTL 70

Query: 66  LHLPSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWS 125
           L LP SG+FT++ IDY  Q+I VNDPN CLPR+ILSL  SGSPF A   +D+TFFNC+  
Sbjct: 71  LQLPYSGNFTIEAIDYGAQQIWVNDPNNCLPRRILSLNFSGSPFTAVYDQDYTFFNCTLD 130

Query: 126 DPIPSEFNLNPIYCLSGLSYAVFASPSSFVNEILS-SSCVAMKTVSVPYSWSF-----SA 185
               S + LN I CLSG +Y VFA+ S+ V + LS S+C  + TVSVP  W F     S+
Sbjct: 131 ---YSRYGLNLIGCLSGDNYTVFATLSNEVVDSLSLSTCRRVATVSVPVGWPFYGGVSSS 190

Query: 186 DLTNDLRLGWKKPNCRRCESQGGICGLAPNSTDQIQCKHSA 218
           +LT+DL L W  P CR+CES+G  CGL PNST++I C  ++
Sbjct: 191 NLTDDLWLTWSNPKCRKCESRGAKCGLKPNSTNEISCSSAS 228

[Close]
BLAST of CmoCh16G000660 vs. TAIR10
Match: AT5G53110.1 (AT5G53110.1 RING/U-box superfamily protein)

HSP 1 Score: 188.0 bits (476), Expect = 7.5e-48
Identity = 99/210 (47.14%), Postives = 131/210 (62.38%), Query Frame = 1 

Query: 20  CFHSSCNGDFQTIQFPFRIENQQPKSCGYP-GFDLTCP--STGQPLLHLPSSGDFTVQYI 79
           C ++ C  D   I+FPFR+++QQ  SCGY  GFDLTC   +  +  + LP SG+FTV+ I
Sbjct: 30  CTNAVCRRDGPIIRFPFRLKHQQSHSCGYDKGFDLTCDINAGNRTTITLPFSGNFTVEEI 89

Query: 80  DYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPIYC 139
           DY  QEI +NDPN CLP++IL L L+ +PF       FTFFNC  S+ +     LNPI C
Sbjct: 90  DYAAQEIWINDPNNCLPQRILQLNLNSTPFSGVYMRQFTFFNCPTSEYLRFR-PLNPITC 149

Query: 140 LSGLSYAVFASPS-SFVNEILSSSCVAMKTVSVPYSWSF------SADLTNDLRLGWKKP 199
           LSG +  VFA+PS   +N + S SC  MKTV VP  W F      S+DL+++L L W+ P
Sbjct: 150 LSGKNSTVFATPSPRVINYLSSQSCRLMKTVYVPVRWPFYEQIVSSSDLSDNLWLTWRVP 209

Query: 200 NCRRCESQGGICGLAPNSTDQIQCKHSAQP 220
            C RCE +GG CG+  NS+ +I C H  +P
Sbjct: 210 RCSRCEIKGGKCGIKSNSSREIICSHVHKP 238

[Close]
BLAST of CmoCh16G000660 vs. TAIR10
Match: AT2G25410.1 (AT2G25410.1 RING/U-box superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 6.8e-33
Identity = 76/221 (34.39%), Postives = 111/221 (50.23%), Query Frame = 1 

Query: 6   LFYHVDSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHL 65
           LF+     AS  + C+  SC+ +    +FPF + + QP+SCGY GF+L C       L L
Sbjct: 15  LFFFPLLNASEQKPCYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDDANTTLKL 74

Query: 66  PSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPI 125
           P S  F V+ IDYE Q I +NDP  CL R++L+ + SGSPF    S ++TF  C     I
Sbjct: 75  PKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKEANI 134

Query: 126 PSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFS------ADLT 185
            + F    I CL   + + F      +   + SSC   K + +P+SW  +         +
Sbjct: 135 TASF--RAIDCLGNTTSSFFVVQFENLGS-MPSSCHIFKILPLPFSWFVAYTTYPDGQNS 194

Query: 186 NDLRLGWKKPNCRRCESQ-GGICGLAPNSTDQIQCKHSAQP 220
            D+ L W  P+CR CE +    CG   N++ Q++C  S  P
Sbjct: 195 RDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVECFSSVNP 232

[Close]
BLAST of CmoCh16G000660 vs. TAIR10
Match: AT2G46495.1 (AT2G46495.1 RING/U-box superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 3.8e-31
Identity = 73/208 (35.10%), Postives = 114/208 (54.81%), Query Frame = 1 

Query: 14  ASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTV 73
           AS  + C  SSC  D   ++FPF + ++QP+ CG+ GF+L C ++ +  L LP+SG F V
Sbjct: 20  ASHPQQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPKTALKLPNSGTFLV 79

Query: 74  QYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNP 133
           + IDY +Q+I + DP  CL RK+L+ ++S SPF A     +TF +C   + +      + 
Sbjct: 80  REIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSC--PNEVAKSSRFDS 139

Query: 134 IYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYS-------WSFSADLTN-DLRLG 193
           I CL   + +  A+ S  + + +  SC  +KT+ VP S         FS D+ + DL L 
Sbjct: 140 IPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLK 199

Query: 194 WKKPNCRRCESQGGICGLAPNSTDQIQC 214
           W  P+C  CE     CG   N++ Q++C
Sbjct: 200 WDSPSCSDCERDFLRCGFRSNTSLQVKC 225

[Close]
BLAST of CmoCh16G000660 vs. TAIR10
Match: AT5G36001.1 (AT5G36001.1 RING/U-box superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-28
Identity = 72/208 (34.62%), Postives = 111/208 (53.37%), Query Frame = 1 

Query: 7   FYHVDSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLP 66
           FY     AS  + C+ SSC G+   + FPF +  +Q  SC YPGF+L C    +  L LP
Sbjct: 17  FYFPLLNASKPKRCYSSSCGGNNLDVSFPFWLSPEQSSSCDYPGFNLHC----ETALKLP 76

Query: 67  SSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIP 126
           +S  F VQ  D ++Q I + DP+ CL R++LS + S SPF   +  ++TF +C  ++ + 
Sbjct: 77  NSRRFLVQ--DIKSQRIHLRDPDNCLARRLLSFDASMSPFSPLHLVNYTFLSCH-NENVK 136

Query: 127 SEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFSADLT-NDLRLG 186
           S  +L PI+CL+       ++PS      + SSC  +KT+ +P S   + DL   DL L 
Sbjct: 137 SS-SLEPIHCLTN------STPSDLTGS-MPSSCQTLKTLLLPVSSPLAGDLNKQDLWLK 196

Query: 187 WKKPNCRRCESQGGICGLAPNSTDQIQC 214
           W  P+C  C     +C    N+  +++C
Sbjct: 197 WDSPDCTGCVDFSPLCSFINNTILKVKC 209

[Close]
BLAST of CmoCh16G000660 vs. TAIR10
Match: AT2G46494.1 (AT2G46494.1 RING/U-box superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-27
Identity = 67/195 (34.36%), Postives = 98/195 (50.26%), Query Frame = 1 

Query: 32  IQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQYIDYENQEILVNDPNKC 91
           I+FPF         C +P F+L C +    +L LP SG F VQYIDY  Q+I +NDP  C
Sbjct: 46  IRFPF---------CDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENC 105

Query: 92  LPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPIYCLSGLSYAVFASPSSF 151
           L +++L+  +SGSPF       +TF  C     +PS +   P  CLS  + + FA+ +  
Sbjct: 106 LAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWYPSIP--CLSNSTSSFFATSNFA 165

Query: 152 VNEILSSSCVAMKTVSVP-----YSWSFSADLTNDLRLGWKKPNCRRCESQGGICGLAPN 211
           + E +  SC  +K + VP         FS+ L   L L W  PNCR CE     CG    
Sbjct: 166 LAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNK 225

Query: 212 STDQIQCKHSAQPRH 222
           ++ +++C  + +  H
Sbjct: 226 ASPEVKCFGAKKSGH 229

[Close]
BLAST of CmoCh16G000660 vs. NCBI nr
Match: gi|778681878|ref|XP_011651602.1| (PREDICTED: RING-H2 finger protein ATL20-like [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 8.6e-86
Identity = 153/210 (72.86%), Postives = 174/210 (82.86%), Query Frame = 1 

Query: 15  STSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQ 74
           +TSELC  S+CNG FQTI+FPFRI+NQQPKSCGYP FDLTC  +GQPL+HLP SG+F VQ
Sbjct: 22  TTSELCLDSTCNGSFQTIRFPFRIQNQQPKSCGYPAFDLTCHPSGQPLIHLPFSGEFIVQ 81

Query: 75  YIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPI 134
           YIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFTFFNCS SD IP +FNLNPI
Sbjct: 82  YIDYKNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPI 141

Query: 135 YCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSW-SFSADLTNDLRLGWKKPNCRR 194
            CLSGLSYAVFAS SS VNEILSS C  +KTVSVP S  ++S DL NDLRLGWKKPNC++
Sbjct: 142 SCLSGLSYAVFASSSSMVNEILSSRCELVKTVSVPMSLETYSWDLRNDLRLGWKKPNCKK 201

Query: 195 CESQGGICGLAPNSTDQIQCKHSAQPRHGM 224
           CE  GGICG+ PNST++IQCK++   + GM
Sbjct: 202 CELNGGICGIKPNSTNEIQCKYNTSTQSGM 231

[Close]
BLAST of CmoCh16G000660 vs. NCBI nr
Match: gi|659082012|ref|XP_008441618.1| (PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 3.3e-85
Identity = 152/212 (71.70%), Postives = 174/212 (82.08%), Query Frame = 1 

Query: 15  STSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHLPSSGDFTVQ 74
           +TSELCF S+CNG+FQTI+FPFRI+N+QPKSCGYPGFDLTC  TGQPL+HLP SG+F VQ
Sbjct: 23  TTSELCFDSTCNGNFQTIRFPFRIQNKQPKSCGYPGFDLTCHPTGQPLIHLPLSGEFIVQ 82

Query: 75  YIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPIPSEFNLNPI 134
           YIDY+NQEI VNDPN CLPRKILSL L GSPF A N+ DFTFFNCS SD IP +FNLNPI
Sbjct: 83  YIDYQNQEIWVNDPNNCLPRKILSLMLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPI 142

Query: 135 YCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPY---SWSFSADLTNDLRLGWKKPNC 194
            CLSGLSYAVFAS SS VN ILSS C  +KTVSVP    S+S+  DL NDLRL WKKPNC
Sbjct: 143 SCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNC 202

Query: 195 RRCESQGGICGLAPNSTDQIQCKHSAQPRHGM 224
           ++CE  GG+CG+ PNST++IQCK++     GM
Sbjct: 203 KKCELNGGVCGIKPNSTNEIQCKYNTSTPSGM 234

[Close]
BLAST of CmoCh16G000660 vs. NCBI nr
Match: gi|659082008|ref|XP_008441616.1| (PREDICTED: putative RING-H2 finger protein ATL21A isoform X1 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 4.1e-64
Identity = 125/211 (59.24%), Postives = 155/211 (73.46%), Query Frame = 1 

Query: 6   LFYHVDSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHL 65
           LF+   + A+TSELCF S C GD+QTI+FPFRI N QPKSCGYPGFDL+C  TG+ LLHL
Sbjct: 6   LFFSFFNLATTSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGETLLHL 65

Query: 66  PSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPI 125
           P SGDF VQ IDY +QEI +NDP+ CLP+KILSL LSGSPF   NS+ F F+NCS S  +
Sbjct: 66  PPSGDFIVQTIDYMHQEIRINDPDNCLPKKILSLNLSGSPFVKKNSQSFAFYNCS-SSYM 125

Query: 126 PSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFSADLTNDLRLG 185
           P  + ++PIYCLS LSY V+AS S  +  +  S+CV +KTVSVP S S+S+ L +DL L 
Sbjct: 126 PYWY-IDPIYCLSSLSYTVYASSSPLLINMFESNCVMIKTVSVPSSSSYSSKLWDDLLLK 185

Query: 186 WKKPNCRRCESQGGICGLAPNSTDQIQCKHS 217
           W+ P+C RCES G  C L  NS++ IQC +S
Sbjct: 186 WENPDCGRCESIGQRCELKSNSSNGIQCTNS 214

[Close]
BLAST of CmoCh16G000660 vs. NCBI nr
Match: gi|778688699|ref|XP_004151260.2| (PREDICTED: putative RING-H2 finger protein ATL21B [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 1.5e-61
Identity = 121/211 (57.35%), Postives = 153/211 (72.51%), Query Frame = 1 

Query: 6   LFYHVDSPASTSELCFHSSCNGDFQTIQFPFRIENQQPKSCGYPGFDLTCPSTGQPLLHL 65
           LF+   + A++SELCF S C GD+QTI+FPFRI N QPKSCGYPGFDL+C  TG+PLLHL
Sbjct: 8   LFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGEPLLHL 67

Query: 66  PSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPI 125
           P SGDF VQ IDY +QEI +NDP+ CLP+KIL L LSGSPF   NS+   FFNCS S+ I
Sbjct: 68  PHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS-SNYI 127

Query: 126 PSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSFSADLTNDLRLG 185
           P  +N +PIYCLS  S+ V+AS S  +  +  S+C  +KTVSVP S+S+S++L   L L 
Sbjct: 128 PYWYN-DPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWEYLLLK 187

Query: 186 WKKPNCRRCESQGGICGLAPNSTDQIQCKHS 217
           W+ P+C RCES G  C +  NS+++IQC  S
Sbjct: 188 WENPDCGRCESVGQRCEVKSNSSNEIQCTDS 216

[Close]
BLAST of CmoCh16G000660 vs. NCBI nr
Match: gi|1009122805|ref|XP_015878200.1| (PREDICTED: putative RING-H2 finger protein ATL21A [Ziziphus jujuba])

HSP 1 Score: 217.2 bits (552), Expect = 3.3e-53
Identity = 107/215 (49.77%), Postives = 141/215 (65.58%), Query Frame = 1 

Query: 7   FYHVDSPASTSELCFHSSCNGDFQTIQFPFRIEN-QQPKSCGYPGFDLTCPSTGQPLLHL 66
           F+      ++ E+C  + C  D   I+FPF+++N QQ +SCGYPGFDL+C    Q +L L
Sbjct: 15  FFSFSYLVTSLEVCTEAVCARDEPKIRFPFQLKNRQQAESCGYPGFDLSCDMKSQTILKL 74

Query: 67  PSSGDFTVQYIDYENQEILVNDPNKCLPRKILSLELSGSPFHATNSEDFTFFNCSWSDPI 126
           P++G+FTVQ IDY  QEI +NDPN CLP++ILSL LSGSPF+    +DF FFNCS S   
Sbjct: 75  PNAGEFTVQAIDYGTQEIWINDPNNCLPKRILSLNLSGSPFYGVFYQDFAFFNCSSSY-- 134

Query: 127 PSEFNLNPIYCLSGLSYAVFASPSSFVNEILSSSCVAMKTVSVPYSWSF-----SADLTN 186
             ++ LNPI CLSG +Y +FA+ S+ +  +LSS C ++ T  VP  W+F     SADL  
Sbjct: 135 -LDYGLNPIACLSGSTYTIFATASTAMANLLSSQCYSVGTFPVPVQWTFYEKVMSADLGE 194

Query: 187 DLRLGWKKPNCRRCESQGGICGLAPNSTDQIQCKH 216
           DLRL W  P C RCESQGG CG   NS+ +I C +
Sbjct: 195 DLRLTWDVPTCGRCESQGGRCGYKSNSSREIVCSN 226

The following BLAST results are available for this feature:
BLAST of CmoCh16G000660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL22_ARATH1.2e-3134.39RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2[more]
AT21A_ARATH6.7e-3035.10Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV... [more]
AT21B_ARATH5.8e-2634.36Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana GN=ATL21B PE=3 SV... [more]
AT21C_ARATH3.4e-1835.33Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana GN=ATL21C PE=3 SV... [more]
ATL20_ARATH4.6e-1530.67RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2 SV=2[more]
BLAST of CmoCh16G000660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC42_CUCSA6.0e-8672.86Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603590 PE=4 SV=1[more]
A0A0A0L8U8_CUCSA1.0e-6157.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603600 PE=4 SV=1[more]
A0A061G8Y3_THECC3.9e-5351.21RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015374 PE=4 S... [more]
A0A059DFG9_EUCGR1.6e-5148.43Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01473 PE=4 SV=1[more]
A0A0D2P196_GOSRA2.1e-5149.77Uncharacterized protein OS=Gossypium raimondii GN=B456_007G014700 PE=4 SV=1[more]
BLAST of CmoCh16G000660 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53110.17.5e-4847.14 RING/U-box superfamily protein[more]
AT2G25410.16.8e-3334.39 RING/U-box superfamily protein[more]
AT2G46495.13.8e-3135.10 RING/U-box superfamily protein[more]
AT5G36001.13.9e-2834.62 RING/U-box superfamily protein[more]
AT2G46494.13.3e-2734.36 RING/U-box superfamily protein[more]
BLAST of CmoCh16G000660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778681878|ref|XP_011651602.1|8.6e-8672.86PREDICTED: RING-H2 finger protein ATL20-like [Cucumis sativus][more]
gi|659082012|ref|XP_008441618.1|3.3e-8571.70PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo][more]
gi|659082008|ref|XP_008441616.1|4.1e-6459.24PREDICTED: putative RING-H2 finger protein ATL21A isoform X1 [Cucumis melo][more]
gi|778688699|ref|XP_004151260.2|1.5e-6157.35PREDICTED: putative RING-H2 finger protein ATL21B [Cucumis sativus][more]
gi|1009122805|ref|XP_015878200.1|3.3e-5349.77PREDICTED: putative RING-H2 finger protein ATL21A [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025287WAK_GUB
Vocabulary: Molecular Function
TermDefinition
GO:0030247polysaccharide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G000660.1CmoCh16G000660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025287Wall-associated receptor kinase, galacturonan-binding domainPFAMPF13947GUB_WAK_bindcoord: 22..120
score: 6.
NoneNo IPR availablePANTHERPTHR27009FAMILY NOT NAMEDcoord: 14..214
score: 2.0
NoneNo IPR availablePANTHERPTHR27009:SF18SUBFAMILY NOT NAMEDcoord: 14..214
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G000660CmaCh16G000600Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G000660Csa3G603590Cucumber (Chinese Long) v2cmocuB314
CmoCh16G000660ClCG05G008830Watermelon (Charleston Gray)cmowcgB290
CmoCh16G000660CSPI03G26480Wild cucumber (PI 183967)cmocpiB322
CmoCh16G000660Lsi05G000890Bottle gourd (USVL1VR-Ls)cmolsiB307
CmoCh16G000660Lsi05G021200Bottle gourd (USVL1VR-Ls)cmolsiB308
CmoCh16G000660Cp4.1LG14g06660Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G000660MELO3C008479.2Melon (DHL92) v3.6.1cmomedB318
CmoCh16G000660MELO3C006027.2Melon (DHL92) v3.6.1cmomedB327
CmoCh16G000660CsaV3_3G008090Cucumber (Chinese Long) v3cmocucB0374
CmoCh16G000660CsaV3_4G006580Cucumber (Chinese Long) v3cmocucB0394
CmoCh16G000660Cla97C05G091100Watermelon (97103) v2cmowmbB331
CmoCh16G000660Cla97C05G081010Watermelon (97103) v2cmowmbB328
CmoCh16G000660Bhi01G000347Wax gourdcmowgoB0440
CmoCh16G000660Bhi01G001100Wax gourdcmowgoB0435
CmoCh16G000660CsGy3G024720Cucumber (Gy14) v2cgybcmoB308
CmoCh16G000660CsGy3G008110Cucumber (Gy14) v2cgybcmoB307
CmoCh16G000660Carg15073Silver-seed gourdcarcmoB1326
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G000660Silver-seed gourdcarcmoB0692
CmoCh16G000660Silver-seed gourdcarcmoB0730
CmoCh16G000660Cucumber (Chinese Long) v3cmocucB0398
CmoCh16G000660Watermelon (97103) v2cmowmbB307
CmoCh16G000660Wax gourdcmowgoB0424
CmoCh16G000660Cucurbita moschata (Rifu)cmocmoB236
CmoCh16G000660Cucurbita moschata (Rifu)cmocmoB275
CmoCh16G000660Cucurbita moschata (Rifu)cmocmoB281
CmoCh16G000660Cucumber (Gy14) v1cgycmoB0601
CmoCh16G000660Cucurbita maxima (Rimu)cmacmoB289
CmoCh16G000660Cucurbita maxima (Rimu)cmacmoB405
CmoCh16G000660Cucurbita maxima (Rimu)cmacmoB587
CmoCh16G000660Wild cucumber (PI 183967)cmocpiB337
CmoCh16G000660Cucumber (Chinese Long) v2cmocuB329
CmoCh16G000660Melon (DHL92) v3.5.1cmomeB275
CmoCh16G000660Melon (DHL92) v3.5.1cmomeB289
CmoCh16G000660Watermelon (Charleston Gray)cmowcgB282
CmoCh16G000660Watermelon (97103) v1cmowmB310
CmoCh16G000660Watermelon (97103) v1cmowmB312
CmoCh16G000660Cucurbita pepo (Zucchini)cmocpeB303
CmoCh16G000660Cucurbita pepo (Zucchini)cmocpeB306
CmoCh16G000660Cucurbita pepo (Zucchini)cmocpeB322
CmoCh16G000660Bottle gourd (USVL1VR-Ls)cmolsiB286
CmoCh16G000660Cucumber (Gy14) v2cgybcmoB594
CmoCh16G000660Melon (DHL92) v3.6.1cmomedB312
CmoCh16G000660Melon (DHL92) v3.6.1cmomedB334