Cp4.1LG14g03570 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAGATCCCTTAGTTTTACTTCCACTGGTCACCACTGATCCAGGTCGCAACAATGGAGGAGAAGAAATTGTTCCATTTTTATTCATAAATTCCAAAAATCAAATTTGAGCTCAGAATTTGTTCTTCCTTGACCAAGACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCATCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTCCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGTTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCGGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGTTCGTCTATGATCCTTTCTCCTGAAATTTCATTTGAGTTTTGTGTTTGCTTAGTTGATTGATTGGTGGGATTTCGTTGTTCTCTAGGTTTTTTCTGGATTGAATTGGCTGTTTTATTGATTGATTGCTGTTCTTCATTGTTCTTCATTGTTGTTGTGATTGAATAATTCTAGTATGCTGCACCTATCTGTTTAGATGATCAATTAAAGACAAATGGTGTTAAATCATAGGGGGTTTGGATTGTTTCTACTTCATAATTGCTTCAGATTATTGTTATGGAATACTTAGATTGTTTTACAGACGTGAATTGATTCTGAAAGTACTGGATGCACAGCTCTGAGGTTCATTGTCAAGTTGAAGACTGACTGTTACTTCTCTTAAAATTTTCACCTTTCTTCAAAGGGCTTGGTTGGGGAGGAGAACGTAGCATTCTTTATAAGGGTGTGGAAACTTCTTCCTACCATACGCGTTTTAGAAACCGTGAGGGAAAGCCTAAAAGGGAAAGGCTAAAGAGGACAATATCTACTAGGTGGACTTGAGCTGTTACAAATGGTATTAGAACTAGACACTGGGCGATGTGCCAGCGAGAGGCTGAGCCCCGAATAAGGGTGGACATGAGGTGGTGTGCCAATAAGGACGTTGGAACTCGAAGGGGGGTGAATTGGGGAGTCCCACATCAATTGGAGAAGGAAACGAGTGCCAACGAGGACGTTGGGTCCTGAAAGGGGGTGGATTGTGAGATTTTTCACATTGGTTGGGGAGGAGAATGAAGTACTCTTTATAAGGTGTGGAAACCTCTCCCTAGCAGATGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCTGAAGAGGCCAATATCTGCTGGCAGTGGACTTAAGCTGTTACAAATGGTATTAGAGCCAGACACGGGGCGATGTGTCAGTGAGGAGACTGAACCCCGAAGGAAGTGGACACGAGGCGGTGTGTTAGCAAGGACGCTGGCCCCGAAGGGGCTGGACTGGAGGGTCCCACATCGATTGAAGAAGGGAACGAGTGCTAGCGAGGACGCTGGGCCCCGAAGAGGGGTGGATTGTGAGATCCCATGTCGGTTGGAAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGGAGATGCGTTTTAAAAACCTTGAGGAGAAGCCCGAAAGGGAAAGGCCGAAGAGGACAACTGCTAGCGGTGGGTTTGAGCCGCGTTACAAATGAACTATCAACATTTTCTTAATCTTGTTTGCTCTTTACATTTATTTCGGTGACTGGAAGCTACAGAACTGCCTCTTTCAGCAACGCTAATAGCCCTCCTGCTGAAATTCTATTTCCCAGGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGAAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAATCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTAAGTAATCCATTCCTGCTCGATCTTGATCAAGCACATATTTTATCTTCTAATCATCATATTTCTCGAGTTCGTAGTTTTCAGGAGAATTTTCAAACAATATTGATACGAATAAGGTGTCTTAATCATTCACGTTATTGTCTTGATTAAGCTATCTTGTGGAATGATTCGAATCATGAGTTTAGAAACGAGGTTTCTTTACTCTTGATCTTGATCATCAAGGTAATCCGTTCCAAAACTTTCACTTGGGTTGATTCCTTGTCGTTTTTTGAGTTCTTGGATAATTTAGATCAAGAGATCTCGTTCTTTAACAAAGTTTTTAGATCGAATCCCAGGAGTTTCATAAGTATAGTTTATGTTTTTCAATTCCTCGGATGAACATGTTATGTGTTTCACTGATTCACTGATGATTCATTTCAAATCAGGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTATCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACGTAATTATTTCAATCCTTTCCTACTCGTTTCGTATTGCTCGTTCTTTAACAAGGTTTTTAGATCAAATCTCCATCGACGTTGATGCAGATAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGGTAAGTAACTGAAGTTTGTGATCTCTGATTGTCTTAGTCTGATTATGTTGTTTGTTCATGAGTTGAACTGTTCTTCTGTTATTGCCTGCTATCATGTAATGTTGGCTCGAGTGACTCAGCTGAAGGGTCTTGATTGAGCAACTGCTCATTGGTACGAGGTCTTTTAGGCAAAGTCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTAGGGAAGTTCGTGGTTTCTAAAATGGTATCAGAGTCATACCCTTAACTTAGCCATGACTATAGAATCCTCAAGTGTCGAATAAAAAAATTGAGTCTCGAAGGTGTAGCCAAAGGTGACTTAAGGGTAGAAAAAAGTGTACTTTGTTCGAGGGCTCCAGAGAAGAAGTCGAGTCTCGACTAAGGGGAGGCTGTTCGAGGGCTCCATAGGCCTCAGGGAGGCTATATAGTGTACTTTGTTCGAGGGGAGGATTGTTGAGAGAGGAGTCTTGGAAGATCATAGATTTATGAGTAAGGAATACTATCTTTATTGGTACGAGACCTTTTGGGAAAACCAAAAGCAAAACCACGAGTGCTTATGTTTAAAGTGGACAATATTATACGATTACGGAGGTTCGTGTTTACTAACAGAAACTCCTTCCCCTCCCTTCTCGGTTGATATGTTTCCGGTTTCCATTATGTTCTGGTCGTACGTCTTTGATCTGATTCTTTCTTATTCTATTTGCAGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATGGGCAGCATTTTAGCTATCTTGATGCAGCAACTCATACTCGGTCACTGACACATTCATACTCGGATGGAGCTCTCTCACCTTCTCAAGTGATCAGGTGGTGTTCTCCCTTATAGAAAGCTGCAATGGATGGATGGACGAGACGACCGAAGCCTTCCCCCGGAATCGTTTCGACGAATTGCTTCGATTAAATTCTTGCTTTGAGAATGGACGCTGGTATTCAGCAGCAGTGAGCAAAATGCAAGTACAGGTTCTTAAAATGAGGACTGCAGATTCAATGCTTTGACCTCTAATATCACACTTTGTAGTTAATTATCTCTTTTTCTTTTAAGGGGAGAATCATACGTAAATATATTTCGTAGGGAATCGAATAGGTGCACCACTTTCGATTTTATATTAAATAAGTTCTTAAACTTTTAATTACGTGTCTAA TAGAGATCCCTTAGTTTTACTTCCACTGGTCACCACTGATCCAGGTCGCAACAATGGAGGAGAAGAAATTGTTCCATTTTTATTCATAAATTCCAAAAATCAAATTTGAGCTCAGAATTTGTTCTTCCTTGACCAAGACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCATCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTCCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGTTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCGGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGAAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAATCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTATCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACATAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATGGGCAGCATTTTAGCTATCTTGATGCAGCAACTCATACTCGGTCACTGACACATTCATACTCGGATGGAGCTCTCTCACCTTCTCAAGTGATCAGGTGGTGTTCTCCCTTATAGAAAGCTGCAATGGATGGATGGACGAGACGACCGAAGCCTTCCCCCGGAATCGTTTCGACGAATTGCTTCGATTAAATTCTTGCTTTGAGAATGGACGCTGGTATTCAGCAGCAGTGAGCAAAATGCAAGTACAGGTTCTTAAAATGAGGACTGCAGATTCAATGCTTTGACCTCTAATATCACACTTTGTAGTTAATTATCTCTTTTTCTTTTAAGGGGAGAATCATACGTAAATATATTTCGTAGGGAATCGAATAGGTGCACCACTTTCGATTTTATATTAAATAAGTTCTTAAACTTTTAATTACGTGTCTAA ATGGCCACGGCGTTGCTGCCCTCAACTCATCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTCCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGTTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCGGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGAAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAATCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTATCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACATAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATGGGCAGCATTTTAGCTATCTTGATGCAGCAACTCATACTCGGTCACTGA MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLVSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMGSILAILMQQLILGH
BLAST of Cp4.1LG14g03570 vs. Swiss-Prot
Match: VTE6_ARATH (Protein VTE6, chloroplastic OS=Arabidopsis thaliana GN=VTE6 PE=1 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 1.5e-103 Identity = 214/323 (66.25%), Postives = 251/323 (77.71%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. Swiss-Prot
Match: Y875_SYNY3 (Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 6.4e-43 Identity = 108/237 (45.57%), Postives = 150/237 (63.29%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. Swiss-Prot
Match: Y933_METJA (Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.3e-16 Identity = 72/219 (32.88%), Postives = 122/219 (55.71%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. TrEMBL
Match: A0A0A0KVG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083590 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 1.0e-135 Identity = 263/314 (83.76%), Postives = 281/314 (89.49%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. TrEMBL
Match: B9T1K0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0216620 PE=4 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 1.7e-111 Identity = 220/315 (69.84%), Postives = 254/315 (80.63%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. TrEMBL
Match: M5WGB4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008701mg PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 7.3e-110 Identity = 222/315 (70.48%), Postives = 259/315 (82.22%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. TrEMBL
Match: I1LVA1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 404.8 bits (1039), Expect = 9.5e-110 Identity = 220/308 (71.43%), Postives = 253/308 (82.14%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. TrEMBL
Match: A0A0R0HJH1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G233800 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 9.5e-110 Identity = 220/308 (71.43%), Postives = 253/308 (82.14%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. TAIR10
Match: AT1G78620.2 (AT1G78620.2 Protein of unknown function DUF92, transmembrane) HSP 1 Score: 369.8 bits (948), Expect = 1.7e-102 Identity = 214/332 (64.46%), Postives = 251/332 (75.60%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: gi|449438893|ref|XP_004137222.1| (PREDICTED: uncharacterized protein LOC101208301 [Cucumis sativus]) HSP 1 Score: 491.1 bits (1263), Expect = 1.4e-135 Identity = 263/314 (83.76%), Postives = 281/314 (89.49%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: gi|659101669|ref|XP_008451729.1| (PREDICTED: uncharacterized protein LOC103492936 [Cucumis melo]) HSP 1 Score: 489.2 bits (1258), Expect = 5.5e-135 Identity = 262/314 (83.44%), Postives = 280/314 (89.17%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: gi|255582681|ref|XP_002532119.1| (PREDICTED: uncharacterized membrane protein sll0875 [Ricinus communis]) HSP 1 Score: 410.6 bits (1054), Expect = 2.5e-111 Identity = 220/315 (69.84%), Postives = 254/315 (80.63%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: gi|645239870|ref|XP_008226335.1| (PREDICTED: uncharacterized protein LOC103325927 [Prunus mume]) HSP 1 Score: 407.9 bits (1047), Expect = 1.6e-110 Identity = 222/315 (70.48%), Postives = 259/315 (82.22%), Query Frame = 1
BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: gi|595863709|ref|XP_007211638.1| (hypothetical protein PRUPE_ppa008701mg [Prunus persica]) HSP 1 Score: 405.2 bits (1040), Expect = 1.0e-109 Identity = 222/315 (70.48%), Postives = 259/315 (82.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|