CmaCh16G004240 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G004240
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionIntegral membrane family protein
LocationCma_Chr16 : 2117076 .. 2121062 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACGTGACCATTGACCCAGGTCGCAACAATGGTGGAGAAGAAATTGTTACATTTTTTTTCATAAATTCCAAAAATCAAATTTGAGCTCAGAATTTGTTCTTCCTCGACCAATACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCACCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTGCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGGTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGTGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCTGCTTTCTTGCTTGGTACTCTCACATGGCGTGCCTTTGGGCCTTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGTTCGTCTATGATCCTTTTTCCTGAAATTCCATTTGAGTTTTGTGTTTGCTTCGTTGATTGGTTGATTGATTGGTGGGGTTTCGTTGTTCTCTAGCATTTTTATGGCTTGAATTGGCTGTTTTATTGATTGATTGTTGTTCTTCATTGTTCTTCTTTGTTGTTGTGATTGAATAATTCTAGTATGCTTGCACCCATCTGTTTAGATGATCAATTAAAGACAAATGGTGTTAAATCATAGGGGGTTTGGATTGTTTCTGCTTCAGATTATTGTTATGGAATACTTAGATTGTTTTACAGACGTGAATTGATTCTCCAAGTACTGTATGCACAGCTCTGAGGTTCATTGTCAAGTTGAAGACTTACTGATTGTTATTTCTCTTAAAATGTTCACCTTCTTCAAAGGGCTTCTCTCAAACCATGATTTATCCTTGACTGAGATTGAGATTGAGATGATGTGAGATCCCACATCGGTTGGGGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTAACAACCTTGAGGGGAAGCCTGAAAGGGAAAGCCCGAAGAGGACAATATCTACTAGCGGTAGACTTGAGCTGTTACAAATGGTATTAGAGCTAGACAAGAGGCGATGTGTCAGCAAGGAAGCTGAGCTCCAAATGAAGGTGGATTGGGGAGCCCACATCGATTGGAGAAGGGAACGTGTGCAAGCGAGGACGCTGGGCCCCGAAGGGGAGTGGATTGTTAGATCCCATATCGGTTGGGGAGGAGAATGAAGTACTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCATTTTAAAAACTTTGAGGGGAAGCCTGAAAGAGAAAGTCCAAAGAGGACAATATCTGTTAGTAGTGGACTTGAGTTGTTACAAACGGTATCAGAGCCAGACATCGAGCGATGCGCCAGTGAGGAGGCTGAGCCCCAAAGGGGGTGGACATGAGGCGGTGTGCCAGTAAGGACACTAGGACCTGAAGGGGCTGGATTGGGGGGTCCCACATCAATTGGAGAAGGAAATGAGTGCCAATGAAGACGTTGGGTCCCGGAGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGATGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGGAGACGCGTTTTAAAAACCTTGAGGAGAAGCCCGAAGAAGATAATATCTACTAGCGGTGGGCTTGGGCCATTACAGATAAACTATCAAAATTTTCCTAATCTTGTTTTCTTCTGTGCTTGAGAAAGTATTTATTCCAGTACAAAGCTACAGAACTGCCTCTTTCAGCAACGCTAATAACCCTCCTGCTGAAATTCTGTTTCCCAGGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGACAAGGAAGAAGAGGACTTGGTAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTTATGATAAACAACATTGGAGGAGAAGCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGCGAAATAGGGAAGGCATATGGTCGGATAACGTAAGTAATCCATTCCTGCTCGAACTGGATCAAGCACACATTTTATATTCTAATCATCATTTTTCTCAGAGTTCGTAGTTTTCAGGAGAATTTTCAAATAATTTTGATACGAATCAGGTGTCTTAATCATTCATGTTATTGTTTTAGTATGAAGATTTTGGATATTATAATGAAAGATGCATATTATGCTTCTTAAGCCAATAGAGTTATTCAAGTAGTCTTGATCAAGCTATCTTATCAAATCACGAAGTTTCTTTACTCTTGATCTTGATCATCAAGGTAATACGTTCCAAAACTTTCACTTGGGTTGATTCCTTATCGTTTTTGGAGTTCTTAGATAATTTAGATCAAGAGATCTCGTTATTTAACAAAGTTTTTAGAAACTCAAGTATAGTTTATGTTTTTCAATTCCTTGGATGAACACGATGATTCATTTCAAATCAGGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGATGTAATTATTTCAATCCTTCCCTACTCGTTTCATATGCTCATTCTTTAACAAGGTTTTTAGATCAAATCTTTGTCGACGTTGATGCAGGCAACTGCATCTGGAGCAATTGTATGCGTCATAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGGTAAGCAAGTGAAGTTTGTGATCTCTGATTGCCTTAGTTTGATTATGAGTTGAACTGTTCTTCTGTTATTGCCTGCTCTCATGTAATGTTGGCTTGGTCGGGTCATCACGAACAATGGGTTTGCTCATTGGTATGAGGTCTTTTAGGCAAAGTCACAAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGGAAAAATTTGTGGTTTCTAACATGGTATCAGAGTCATACCCTTAACTTAGTCATGACAATAGAATCCTCAAGTGTCGAACAAAAAAGTTGTGAGTCTCGAAGGTGTAGCCAAAGGTGACTAAAGTGTAGAAAAAAGTGTACTTTGTTCGAGGGCTCTAGAGAAGAAGTCGAAGTCGAGCCTTGAAGAGGAGGCTATTCAAGGGCTCCATAGGCCTTAGGGGAGGCGATATGGTGTACTTTATTCGAGAGGAGGATTGTTGAGAATCGTTGAGAGAGGAGTCTCGAAAGATCATTAGTTTATAAGTAAGGAATACTATCTTCATTGGTACGAGGCCTTTTGGAAAAACCAAAAGCAAAACCACGAGTGTTTATGCTTAAATTGGACAATATTATACCATTATGGAGGTGCGAGTTTACTAACAGAAACTCCTTCCCCTCCCTTCTCGGTCAACTGATATGTTTCCGGTTTCCATTATGTTCTGGTCATACTTCTTCGATCTGATTCTTTCATATTCTATTTGCAGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATAGGCAGCATTTTAGCTATCTCGATGCAGCAACTCATACTTGGTCACTGACACATTCATACTCGGATGGAGCTCTCTCACCTTCTCAAGTGATCAGGTGGTGTTCTCCCTTGATAGAAAGCTGCAACGGATGGACGAGACGACCAAAGCCTCCCCTCGGAATCGTTACGACGATTCAATGCTTTGACCTCTAATATCACTTTGTAGGAAATGGAATATGTGCACCATATTCAATTTTATATTAAATAAATTTTAAACTTTTAATTGCGTTGTTATTGATTTATTCAGTGTTTTTTAAAACTCACCGACC

mRNA sequence

CCACGTGACCATTGACCCAGGTCGCAACAATGGTGGAGAAGAAATTGTTACATTTTTTTTCATAAATTCCAAAAATCAAATTTGAGCTCAGAATTTGTTCTTCCTCGACCAATACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCACCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTGCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGGTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGTGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCTGCTTTCTTGCTTGGTACTCTCACATGGCGTGCCTTTGGGCCTTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGACAAGGAAGAAGAGGACTTGGTAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTTATGATAAACAACATTGGAGGAGAAGCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGCGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGATGCAACTGCATCTGGAGCAATTGTATGCGTCATAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATAGGCAGCATTTTAGCTATCTCGATGCAGCAACTCATACTTGGTCACTGACACATTCATACTCGGATGGAGCTCTCTCACCTTCTCAAGTGATCAGGTGGTGTTCTCCCTTGATAGAAAGCTGCAACGGATGGACGAGACGACCAAAGCCTCCCCTCGGAATCGTTACGACGATTCAATGCTTTGACCTCTAATATCACTTTGTAGGAAATGGAATATGTGCACCATATTCAATTTTATATTAAATAAATTTTAAACTTTTAATTGCGTTGTTATTGATTTATTCAGTGTTTTTTAAAACTCACCGACC

Coding sequence (CDS)

ATGGCCACGGCGTTGCTGCCCTCAACTCACCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTGCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGGTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGTGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCTGCTTTCTTGCTTGGTACTCTCACATGGCGTGCCTTTGGGCCTTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGACAAGGAAGAAGAGGACTTGGTAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTTATGATAAACAACATTGGAGGAGAAGCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGCGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGATGCAACTGCATCTGGAGCAATTGTATGCGTCATAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATAGGCAGCATTTTAGCTATCTCGATGCAGCAACTCATACTTGGTCACTGA

Protein sequence

MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIGSILAISMQQLILGH
Homology
[Close]
BLAST of CmaCh16G004240 vs. Swiss-Prot
Match: VTE6_ARATH (Protein VTE6, chloroplastic OS=Arabidopsis thaliana GN=VTE6 PE=1 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.8e-102
Identity = 211/323 (65.33%), Postives = 249/323 (77.09%), Query Frame = 1 

Query: 2   ATALLPSTHP-FPLRF-------SPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRA 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+      A
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRADGATAAA 65

Query: 62  ESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWR 121
            S++ +++ A+ ++QS  PTW+SA+  NLLIFV+GSP+L +GLS SGIA+AFLLGTLTWR
Sbjct: 66  ASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWR 125

Query: 122 AFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLM 181
           A+G +GFLLVA YFVIGTAATKVKM QKEAQGVAEKR+GRRG  SVIGSSAAGCVCA L 
Sbjct: 126 AYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLS 185

Query: 182 INNIGGEAFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSL 241
           I  +GG AF QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTF+IVPRGTEGA+SL
Sbjct: 186 IYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSL 245

Query: 242 EGTFAGLLAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNN 301
           EGT AGLLA+  LA VGC LG  T   A VCV+ASQIANLGESIIGA  Q+KEGF+WLNN
Sbjct: 246 EGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNN 305

Query: 302 DVVNVINISIGSILAISMQQLIL 317
           DVVNVINIS+GSI+AI MQQ IL
Sbjct: 306 DVVNVINISLGSIVAILMQQFIL 328

[Close]
BLAST of CmaCh16G004240 vs. Swiss-Prot
Match: Y875_SYNY3 (Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.6e-44
Identity = 109/240 (45.42%), Postives = 153/240 (63.75%), Query Frame = 1 

Query: 74  WQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAA 133
           W SA++ N  +  + +      L+  G   A++LG + W A G  G+L+V  YF +G+A 
Sbjct: 18  WLSAVILNSFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAV 77

Query: 134 TKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLW-RLGFVA 193
           T++   +KEA G+AEKR G+RG  +V GS+    +CAL +    G E + QLW  LG+VA
Sbjct: 78  TRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAIA--FGPEPW-QLWLALGYVA 137

Query: 194 SFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCL 253
           SF TKLSDT +SE+GKAYG+ T+L+TT + VPRGTEGAVS+EGT AG  A   LA +G  
Sbjct: 138 SFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGTLAGFAAGLALAVLGYG 197

Query: 254 LGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIGSILAISMQ 313
           +G  +  G I   +A+ IA   ES+IGA LQ K  + WL N+VVN IN  +G+ +AI ++
Sbjct: 198 VGLISFGGIIFSTLAAFIATNLESVIGATLQNK--WPWLTNEVVNGINTFLGAAIAIGIE 252

[Close]
BLAST of CmaCh16G004240 vs. Swiss-Prot
Match: Y933_METJA (Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 73/237 (30.80%), Postives = 127/237 (53.59%), Query Frame = 1 

Query: 78  LLTNLLIFVVGSPILASG--LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATK 137
           L  ++LI  V + ++     L   G+  + ++G +     G    +L+ ++F++G   ++
Sbjct: 12  LFVSILIICVLALMIKKSRCLDNEGVIGSSIMGFILLYFCGFKYLILLLSFFILGVLVSR 71

Query: 138 VKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLWRL-GFVASF 197
           V + +K+A+ + E     R L +V+ +     + A+L I       F   W L G+++S 
Sbjct: 72  VGLEKKKAKKMDETC---RSLKNVLANGLIPILFAILAI-------FGFNWALIGYISSI 131

Query: 198 CTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCLL- 257
               SDT SSE+G        L+TTF +V +GT+GA+++ GT AG+L A ++   G LL 
Sbjct: 132 AAATSDTFSSELGILSNEKPRLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGLFGYLLF 191

Query: 258 GDATASGAIVCVIASQIA-NLGESIIGAVLQEKEGFQWLNNDVVNVINISIGSILAI 310
           GD      ++C  A  IA NL +S++GA L E++G   LNN+ VN+I   +G I+ +
Sbjct: 192 GDIK---IVLCGTAGGIAGNLADSLVGA-LFERKGI--LNNEHVNLIATIVGGIIGV 232

[Close]
BLAST of CmaCh16G004240 vs. TrEMBL
Match: A0A0A0KVG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083590 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.9e-135
Identity = 263/314 (83.76%), Postives = 280/314 (89.17%), Query Frame = 1 

Query: 5   LLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLVSGAV 64
           ++ ST PFPL  SP    K  QF  LP P KPL  KSNPN S K VVRA+S ++L SGAV
Sbjct: 4   MISSTLPFPLLLSP----KRHQFPLLPFPLKPLITKSNPNPSSKMVVRAQSFETLASGAV 63

Query: 65  NIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVA 124
           N++QSNP TW SALL+NLLIF++GSPIL SGLS SGIASAFLLGTLTWRAFGPSGFLLVA
Sbjct: 64  NLLQSNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLVA 123

Query: 125 TYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQ 184
           TYFVIGTAATKVKMAQKEAQGVAEKR+GRRG GSVIGSSAAGCVCA+LMIN +GGEAF Q
Sbjct: 124 TYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFAQ 183

Query: 185 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAAS 244
           LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT F++VPRGTEGAVSLEGTFAGLLAA 
Sbjct: 184 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAI 243

Query: 245 VLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIG 304
            LAFVGCLLGD TAS AIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINIS+G
Sbjct: 244 ALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG 303

Query: 305 SILAISMQQLILGH 319
           SILA+ MQQLILGH
Sbjct: 304 SILAVLMQQLILGH 313

[Close]
BLAST of CmaCh16G004240 vs. TrEMBL
Match: B9T1K0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0216620 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-110
Identity = 220/315 (69.84%), Postives = 252/315 (80.00%), Query Frame = 1 

Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLV 60
           MA ++    +P PL  S      +R    L L   P   K  P         A S+Q  +
Sbjct: 1   MALSIFLQVNPSPLPPSQFNKSTIRLKKILTLNSNPGLPKMLPQEKQTQTPNAVSMQGAL 60

Query: 61  SGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120
           SGA+N++QS PPTWQSAL+ N+LIF++GSPIL SGLS+SGI +AFLLGTLTWRAFGPSGF
Sbjct: 61  SGAMNLIQSAPPTWQSALVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTWRAFGPSGF 120

Query: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGE 180
           LLVA YFVIGTAATKVKMAQKEAQGVAEKR+GRRG GSVIGSSAAGCVCA L I  +GGE
Sbjct: 121 LLVACYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGE 180

Query: 181 AFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGL 240
           AF +LW LGFVASFCTKLSDTVSSEIGKAYG+ITYLVTTF+IVPRGTEGAVS+EGT AGL
Sbjct: 181 AFSRLWELGFVASFCTKLSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEGTLAGL 240

Query: 241 LAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300
           LA+ +LA +GC LG+     A++CVIASQIAN+GESIIGA  QEKEGF+WLNNDVVNV+N
Sbjct: 241 LASILLASIGCFLGEIHIPEAVICVIASQIANVGESIIGATFQEKEGFRWLNNDVVNVLN 300

Query: 301 ISIGSILAISMQQLI 316
           ISIGSILA+ MQQL+
Sbjct: 301 ISIGSILAVLMQQLL 315

[Close]
BLAST of CmaCh16G004240 vs. TrEMBL
Match: A0A0R0HJH1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G233800 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 7.3e-110
Identity = 221/308 (71.75%), Postives = 253/308 (82.14%), Query Frame = 1 

Query: 8   STHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLVSGAVNIV 67
           S HPFPL  +P+ SP    FS     PKP+    NP R L   + A  +Q  V GA+ +V
Sbjct: 45  SFHPFPLHLTPSLSP----FS-----PKPI--SFNPLRPLPRTMHATRIQDAVGGALALV 104

Query: 68  QSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYF 127
           QS+P TWQSALL+N LIF++GSPIL SGLS+SGI +AFLLGTLTWRAFGPSGF LVATYF
Sbjct: 105 QSSPATWQSALLSNALIFLLGSPILVSGLSLSGIGAAFLLGTLTWRAFGPSGFFLVATYF 164

Query: 128 VIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLWR 187
           VIGTAATKVKMAQK AQGVAEKR+GRRG GSVIGSSAAGC+CA L I  +GGEAF +LWR
Sbjct: 165 VIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFLTIFGVGGEAFSRLWR 224

Query: 188 LGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLA 247
           LGFVASFCTKLSDTVSSEIGKAYG+ TYLVTTF+IVPRGTEGAVS+EGT AG+LA+ VLA
Sbjct: 225 LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKIVPRGTEGAVSVEGTLAGILASIVLA 284

Query: 248 FVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIGSIL 307
            V  L+G+  +  AI+CV+A+QIANLGESIIGA LQEKEGF+WLNND VNVINIS+GSI+
Sbjct: 285 LVSFLMGEVGSHEAIICVLAAQIANLGESIIGAALQEKEGFKWLNNDAVNVINISMGSII 341

Query: 308 AISMQQLI 316
           AI MQQ +
Sbjct: 345 AIFMQQAL 341

[Close]
BLAST of CmaCh16G004240 vs. TrEMBL
Match: I1LVA1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 405.2 bits (1040), Expect = 7.3e-110
Identity = 221/308 (71.75%), Postives = 253/308 (82.14%), Query Frame = 1 

Query: 8   STHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLVSGAVNIV 67
           S HPFPL  +P+ SP    FS     PKP+    NP R L   + A  +Q  V GA+ +V
Sbjct: 73  SFHPFPLHLTPSLSP----FS-----PKPI--SFNPLRPLPRTMHATRIQDAVGGALALV 132

Query: 68  QSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYF 127
           QS+P TWQSALL+N LIF++GSPIL SGLS+SGI +AFLLGTLTWRAFGPSGF LVATYF
Sbjct: 133 QSSPATWQSALLSNALIFLLGSPILVSGLSLSGIGAAFLLGTLTWRAFGPSGFFLVATYF 192

Query: 128 VIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLWR 187
           VIGTAATKVKMAQK AQGVAEKR+GRRG GSVIGSSAAGC+CA L I  +GGEAF +LWR
Sbjct: 193 VIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFLTIFGVGGEAFSRLWR 252

Query: 188 LGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLA 247
           LGFVASFCTKLSDTVSSEIGKAYG+ TYLVTTF+IVPRGTEGAVS+EGT AG+LA+ VLA
Sbjct: 253 LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKIVPRGTEGAVSVEGTLAGILASIVLA 312

Query: 248 FVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIGSIL 307
            V  L+G+  +  AI+CV+A+QIANLGESIIGA LQEKEGF+WLNND VNVINIS+GSI+
Sbjct: 313 LVSFLMGEVGSHEAIICVLAAQIANLGESIIGAALQEKEGFKWLNNDAVNVINISMGSII 369

Query: 308 AISMQQLI 316
           AI MQQ +
Sbjct: 373 AIFMQQAL 369

[Close]
BLAST of CmaCh16G004240 vs. TrEMBL
Match: A0A068UBW1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021402001 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107
Identity = 209/270 (77.41%), Postives = 238/270 (88.15%), Query Frame = 1 

Query: 47  LKTVVRAESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFL 106
           L T + A +  SLV  A+ +V+S+PPTWQS+LL+NLLIF++GSPIL SGLS+SGIA+AFL
Sbjct: 2   LTTPLAAATDLSLVQQAIKLVRSSPPTWQSSLLSNLLIFILGSPILVSGLSLSGIAAAFL 61

Query: 107 LGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAG 166
           LGTLTWRAFGPSGF LVA+YFVIGTAATKVKMAQKEAQGVAEKR+GRRG GSVIGSSAAG
Sbjct: 62  LGTLTWRAFGPSGFFLVASYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAG 121

Query: 167 CVCALLMINNIGGEAFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRG 226
           CVCA+L I  IGG+AF  LW LGFVASFCTKLSDTVSSEIGKAYGR TYLVTTF++VPRG
Sbjct: 122 CVCAVLSIYRIGGKAFSPLWLLGFVASFCTKLSDTVSSEIGKAYGRTTYLVTTFKVVPRG 181

Query: 227 TEGAVSLEGTFAGLLAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKE 286
           TEGAVS+EGT AGLLA+ +LA VGCL+G+   S AI+CV+ASQIANLGES IGA  Q KE
Sbjct: 182 TEGAVSVEGTLAGLLASILLASVGCLMGNIKPSEAIICVVASQIANLGESFIGAEFQGKE 241

Query: 287 GFQWLNNDVVNVINISIGSILAISMQQLIL 317
           GF+WLNND VN+INIS+GSILA+ MQQLIL
Sbjct: 242 GFKWLNNDAVNIINISLGSILAVLMQQLIL 271

[Close]
BLAST of CmaCh16G004240 vs. TAIR10
Match: AT1G78620.2 (AT1G78620.2 Protein of unknown function DUF92, transmembrane)

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-101
Identity = 211/332 (63.55%), Postives = 249/332 (75.00%), Query Frame = 1 

Query: 2   ATALLPSTHP-FPLRF-------SPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRA 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+      A
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRADGATAAA 65

Query: 62  ESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWR 121
            S++ +++ A+ ++QS  PTW+SA+  NLLIFV+GSP+L +GLS SGIA+AFLLGTLTWR
Sbjct: 66  ASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWR 125

Query: 122 AFGPSGFLLVATYFVI---------GTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSA 181
           A+G +GFLLVA YFVI         GTAATKVKM QKEAQGVAEKR+GRRG  SVIGSSA
Sbjct: 126 AYGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSA 185

Query: 182 AGCVCALLMINNIGGEAFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVP 241
           AGCVCA L I  +GG AF QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTF+IVP
Sbjct: 186 AGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVP 245

Query: 242 RGTEGAVSLEGTFAGLLAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQE 301
           RGTEGA+SLEGT AGLLA+  LA VGC LG  T   A VCV+ASQIANLGESIIGA  Q+
Sbjct: 246 RGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQD 305

Query: 302 KEGFQWLNNDVVNVINISIGSILAISMQQLIL 317
           KEGF+WLNNDVVNVINIS+GSI+AI MQQ IL
Sbjct: 306 KEGFKWLNNDVVNVINISLGSIVAILMQQFIL 337

[Close]
BLAST of CmaCh16G004240 vs. NCBI nr
Match: gi|449438893|ref|XP_004137222.1| (PREDICTED: uncharacterized protein LOC101208301 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 4.2e-135
Identity = 263/314 (83.76%), Postives = 280/314 (89.17%), Query Frame = 1 

Query: 5   LLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLVSGAV 64
           ++ ST PFPL  SP    K  QF  LP P KPL  KSNPN S K VVRA+S ++L SGAV
Sbjct: 4   MISSTLPFPLLLSP----KRHQFPLLPFPLKPLITKSNPNPSSKMVVRAQSFETLASGAV 63

Query: 65  NIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVA 124
           N++QSNP TW SALL+NLLIF++GSPIL SGLS SGIASAFLLGTLTWRAFGPSGFLLVA
Sbjct: 64  NLLQSNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLVA 123

Query: 125 TYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQ 184
           TYFVIGTAATKVKMAQKEAQGVAEKR+GRRG GSVIGSSAAGCVCA+LMIN +GGEAF Q
Sbjct: 124 TYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFAQ 183

Query: 185 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAAS 244
           LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT F++VPRGTEGAVSLEGTFAGLLAA 
Sbjct: 184 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAI 243

Query: 245 VLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIG 304
            LAFVGCLLGD TAS AIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINIS+G
Sbjct: 244 ALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG 303

Query: 305 SILAISMQQLILGH 319
           SILA+ MQQLILGH
Sbjct: 304 SILAVLMQQLILGH 313

[Close]
BLAST of CmaCh16G004240 vs. NCBI nr
Match: gi|659101669|ref|XP_008451729.1| (PREDICTED: uncharacterized protein LOC103492936 [Cucumis melo])

HSP 1 Score: 484.2 bits (1245), Expect = 1.8e-133
Identity = 261/314 (83.12%), Postives = 278/314 (88.54%), Query Frame = 1 

Query: 5   LLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLVSGAV 64
           ++ ST PFPL  SP    K  QF  LPLP KPL  KSNPN S + VVRA+S  +L SGA 
Sbjct: 4   MISSTLPFPLLLSP----KRHQFPLLPLPLKPLIPKSNPNPSSQMVVRAQSFHTLASGAF 63

Query: 65  NIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVA 124
           N++QSNP TWQSALL+NLLIFV+GSPIL SGLS+SGIASAFLLGTLTWRAFGPSGFLLVA
Sbjct: 64  NLLQSNPSTWQSALLSNLLIFVLGSPILVSGLSLSGIASAFLLGTLTWRAFGPSGFLLVA 123

Query: 125 TYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQ 184
           TYFVIGTAATKVKMAQKEAQGVAEKR+GRRG GSVIGSSAAGCVCA+LMIN +GGEAF Q
Sbjct: 124 TYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFSQ 183

Query: 185 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAAS 244
           LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT F++VPRGTEGAVSLEGTFAGLLAA 
Sbjct: 184 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAI 243

Query: 245 VLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIG 304
            LA  GCLLGD TA  AIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINIS+G
Sbjct: 244 TLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG 303

Query: 305 SILAISMQQLILGH 319
           SILA+ MQQLILGH
Sbjct: 304 SILAVLMQQLILGH 313

[Close]
BLAST of CmaCh16G004240 vs. NCBI nr
Match: gi|255582681|ref|XP_002532119.1| (PREDICTED: uncharacterized membrane protein sll0875 [Ricinus communis])

HSP 1 Score: 407.9 bits (1047), Expect = 1.6e-110
Identity = 220/315 (69.84%), Postives = 252/315 (80.00%), Query Frame = 1 

Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLV 60
           MA ++    +P PL  S      +R    L L   P   K  P         A S+Q  +
Sbjct: 1   MALSIFLQVNPSPLPPSQFNKSTIRLKKILTLNSNPGLPKMLPQEKQTQTPNAVSMQGAL 60

Query: 61  SGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120
           SGA+N++QS PPTWQSAL+ N+LIF++GSPIL SGLS+SGI +AFLLGTLTWRAFGPSGF
Sbjct: 61  SGAMNLIQSAPPTWQSALVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTWRAFGPSGF 120

Query: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGE 180
           LLVA YFVIGTAATKVKMAQKEAQGVAEKR+GRRG GSVIGSSAAGCVCA L I  +GGE
Sbjct: 121 LLVACYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGE 180

Query: 181 AFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGL 240
           AF +LW LGFVASFCTKLSDTVSSEIGKAYG+ITYLVTTF+IVPRGTEGAVS+EGT AGL
Sbjct: 181 AFSRLWELGFVASFCTKLSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEGTLAGL 240

Query: 241 LAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300
           LA+ +LA +GC LG+     A++CVIASQIAN+GESIIGA  QEKEGF+WLNNDVVNV+N
Sbjct: 241 LASILLASIGCFLGEIHIPEAVICVIASQIANVGESIIGATFQEKEGFRWLNNDVVNVLN 300

Query: 301 ISIGSILAISMQQLI 316
           ISIGSILA+ MQQL+
Sbjct: 301 ISIGSILAVLMQQLL 315

[Close]
BLAST of CmaCh16G004240 vs. NCBI nr
Match: gi|571494797|ref|XP_003540509.2| (PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max])

HSP 1 Score: 405.2 bits (1040), Expect = 1.0e-109
Identity = 221/308 (71.75%), Postives = 253/308 (82.14%), Query Frame = 1 

Query: 8   STHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLVSGAVNIV 67
           S HPFPL  +P+ SP    FS     PKP+    NP R L   + A  +Q  V GA+ +V
Sbjct: 45  SFHPFPLHLTPSLSP----FS-----PKPI--SFNPLRPLPRTMHATRIQDAVGGALALV 104

Query: 68  QSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYF 127
           QS+P TWQSALL+N LIF++GSPIL SGLS+SGI +AFLLGTLTWRAFGPSGF LVATYF
Sbjct: 105 QSSPATWQSALLSNALIFLLGSPILVSGLSLSGIGAAFLLGTLTWRAFGPSGFFLVATYF 164

Query: 128 VIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLWR 187
           VIGTAATKVKMAQK AQGVAEKR+GRRG GSVIGSSAAGC+CA L I  +GGEAF +LWR
Sbjct: 165 VIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFLTIFGVGGEAFSRLWR 224

Query: 188 LGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLA 247
           LGFVASFCTKLSDTVSSEIGKAYG+ TYLVTTF+IVPRGTEGAVS+EGT AG+LA+ VLA
Sbjct: 225 LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKIVPRGTEGAVSVEGTLAGILASIVLA 284

Query: 248 FVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISIGSIL 307
            V  L+G+  +  AI+CV+A+QIANLGESIIGA LQEKEGF+WLNND VNVINIS+GSI+
Sbjct: 285 LVSFLMGEVGSHEAIICVLAAQIANLGESIIGAALQEKEGFKWLNNDAVNVINISMGSII 341

Query: 308 AISMQQLI 316
           AI MQQ +
Sbjct: 345 AIFMQQAL 341

[Close]
BLAST of CmaCh16G004240 vs. NCBI nr
Match: gi|645239870|ref|XP_008226335.1| (PREDICTED: uncharacterized protein LOC103325927 [Prunus mume])

HSP 1 Score: 401.7 bits (1031), Expect = 1.2e-108
Identity = 221/317 (69.72%), Postives = 257/317 (81.07%), Query Frame = 1 

Query: 8   STHPFPLRFSPTPSPKL-----RQFSSLP---LPPKPLFAKSNPNRSLKTVVRAESLQSL 67
           STH   L   P P P         FS LP   L P P   K  P + +    +A S+QS 
Sbjct: 4   STHLL-LHIKPPPVPSFIKSHRSSFSILPRNFLIPSPCHRK--PIKEIVMKPQAASVQSA 63

Query: 68  VSGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 127
           VS  ++++QS+PPTWQSA+L+NLLIF++GSPIL SGLSVSGIA+AFLLGTLTWRAFG SG
Sbjct: 64  VSEVMSLIQSSPPTWQSAILSNLLIFLLGSPILVSGLSVSGIAAAFLLGTLTWRAFGSSG 123

Query: 128 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGG 187
           FLLVATYFVIGTA TKV+MAQKEA+GVAEKR+GRRG GSVIGSSAAGC+CA L I   GG
Sbjct: 124 FLLVATYFVIGTAVTKVRMAQKEAEGVAEKRKGRRGPGSVIGSSAAGCICAFLAIFGAGG 183

Query: 188 EAFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 247
             + +LW+LGFVASFCTKLSDTVSSEIGKAYG+ TYLVTT ++VPRGTEGAVS+EGTFAG
Sbjct: 184 TGYSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKVVPRGTEGAVSVEGTFAG 243

Query: 248 LLAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI 307
           LLAA +LAFVGCL+G+ TA  AI+CVIASQIAN GESIIGA LQ+KEGF+WLNND VNVI
Sbjct: 244 LLAAILLAFVGCLVGEITAPEAIICVIASQIANFGESIIGAALQDKEGFRWLNNDAVNVI 303

Query: 308 NISIGSILAISMQQLIL 317
           NIS+GSI+A+ MQQ++L
Sbjct: 304 NISMGSIIAVFMQQVLL 317

The following BLAST results are available for this feature:
BLAST of CmaCh16G004240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VTE6_ARATH2.8e-10265.33Protein VTE6, chloroplastic OS=Arabidopsis thaliana GN=VTE6 PE=1 SV=1[more]
Y875_SYNY37.6e-4445.42Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 /... [more]
Y933_METJA1.7e-1430.80Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain... [more]
BLAST of CmaCh16G004240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVG7_CUCSA2.9e-13583.76Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083590 PE=4 SV=1[more]
B9T1K0_RICCO1.1e-11069.84Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0216620 PE=4 SV=1[more]
A0A0R0HJH1_SOYBN7.3e-11071.75Uncharacterized protein OS=Glycine max GN=GLYMA_12G233800 PE=4 SV=1[more]
I1LVA1_SOYBN7.3e-11071.75Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
A0A068UBW1_COFCA2.0e-10777.41Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021402001 PE=4 SV=1[more]
BLAST of CmaCh16G004240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78620.23.2e-10163.55 Protein of unknown function DUF92, transmembrane[more]
BLAST of CmaCh16G004240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438893|ref|XP_004137222.1|4.2e-13583.76PREDICTED: uncharacterized protein LOC101208301 [Cucumis sativus][more]
gi|659101669|ref|XP_008451729.1|1.8e-13383.12PREDICTED: uncharacterized protein LOC103492936 [Cucumis melo][more]
gi|255582681|ref|XP_002532119.1|1.6e-11069.84PREDICTED: uncharacterized membrane protein sll0875 [Ricinus communis][more]
gi|571494797|ref|XP_003540509.2|1.0e-10971.75PREDICTED: uncharacterized membrane protein sll0875-like [Glycine max][more]
gi|645239870|ref|XP_008226335.1|1.2e-10869.72PREDICTED: uncharacterized protein LOC103325927 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002794DUF92_TMEM19
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0048767 root hair elongation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009706 chloroplast inner membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G004240.1CmaCh16G004240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002794Protein of unknown function DUF92, TMEM19PANTHERPTHR13353FAMILY NOT NAMEDcoord: 23..316
score: 6.5E
IPR002794Protein of unknown function DUF92, TMEM19PFAMPF01940DUF92coord: 84..304
score: 3.5
NoneNo IPR availablePANTHERPTHR13353:SF7SUBFAMILY NOT NAMEDcoord: 23..316
score: 6.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G004240Cucsa.273580Cucumber (Gy14) v1cgycmaB0759
CmaCh16G004240Cla002442Watermelon (97103) v1cmawmB311
CmaCh16G004240Csa4G083590Cucumber (Chinese Long) v2cmacuB337
CmaCh16G004240MELO3C016111Melon (DHL92) v3.5.1cmameB301
CmaCh16G004240ClCG07G010100Watermelon (Charleston Gray)cmawcgB300
CmaCh16G004240CSPI04G08030Wild cucumber (PI 183967)cmacpiB342
CmaCh16G004240CmoCh16G004560Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G004240CmoCh04G007090Cucurbita moschata (Rifu)cmacmoB340
CmaCh16G004240Lsi07G002920Bottle gourd (USVL1VR-Ls)cmalsiB329
CmaCh16G004240Cp4.1LG14g03570Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G004240Cp4.1LG01g00650Cucurbita pepo (Zucchini)cmacpeB353
CmaCh16G004240MELO3C016111.2Melon (DHL92) v3.6.1cmamedB351
CmaCh16G004240CsaV3_4G008250Cucumber (Chinese Long) v3cmacucB0393
CmaCh16G004240Cla97C07G136780Watermelon (97103) v2cmawmbB350
CmaCh16G004240Bhi01G002501Wax gourdcmawgoB0437
CmaCh16G004240Carg13093Silver-seed gourdcarcmaB0052
CmaCh16G004240Carg11355Silver-seed gourdcarcmaB0924
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G004240CmaCh04G006610Cucurbita maxima (Rimu)cmacmaB353
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G004240Silver-seed gourdcarcmaB0053
CmaCh16G004240Cucumber (Chinese Long) v3cmacucB0396
CmaCh16G004240Watermelon (97103) v2cmawmbB340
CmaCh16G004240Wax gourdcmawgoB0451
CmaCh16G004240Cucurbita maxima (Rimu)cmacmaB351
CmaCh16G004240Cucurbita moschata (Rifu)cmacmoB338
CmaCh16G004240Wild cucumber (PI 183967)cmacpiB345
CmaCh16G004240Watermelon (Charleston Gray)cmawcgB288
CmaCh16G004240Watermelon (97103) v1cmawmB325
CmaCh16G004240Cucurbita pepo (Zucchini)cmacpeB351
CmaCh16G004240Bottle gourd (USVL1VR-Ls)cmalsiB311
CmaCh16G004240Cucumber (Gy14) v2cgybcmaB498
CmaCh16G004240Cucumber (Gy14) v2cgybcmaB500