CmaCh04G006610 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G006610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionIntegral membrane family protein
LocationCma_Chr04 : 3368788 .. 3373007 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATTGATGGCTGCAACTTTTCCTCTTCCCCTTCATCCTTCTCCCAAACTCATCAATTTCCCCTTTTACGTCTTCTCTCATAAACCCTAATTCCCAATTCGAGCCCTAACCGATCCGTTAAGATGGTCGTCCCAGCTGAGAATTTTCAGAGCATAGCTTCCGCCGCTGTCAATCTTGTTCAATCGAGCCCAGACACGTGGCAGTCGGCCTTACTCAGCAACCTGCTGATTTTCGTCGTGGGTTTGCCGATTCTGGTCACGGGGTTGTCTGTTTCTGGCATTGCTTCTGCTTTCTTGCTTGGTACACTCACGTGGCGTGCTTTTGGGCCCTCTGGTTTCCTTCTTGTTGCTACCTATTTCATCATTGTTCGTCTTTGTTCCCTCTTGCTGAATTTCAATTTGGGCTTTGTTTGATGTGTGGGATTTGGTCTCTTTAGCATGTTCCTGGATTGGATTGGTTGTTTTGTTCAACGCCGTGTTATTTTTCGTTCGTTGGATCAATATCTCTGTTTTTCTTTTTTTCGCTGATTTCTGTATTGACTGAATAGTTCTAGTGTGGAAACCCGTCTTTTAGATGATCAAATAGAAAAAAATGGTTAAAACTCAGGGAATTGGGTTGGGTGCTTTCTCCTTCACAATTGCTTCAAAATGATTGTAATGGAATACATGTAAATGTTAGAATACTAGTATTTGGACCCCCCTCATTACTTATGCAGAGCTCACGAGTTTCATTGACAAGTCTATGACCATCTTGATTGTCACCGTACTTAAAGTGCTACTATCTCTCATATTAAAGTTCTTTTGAAGGAAAACCACTCAACAATCTTTCAACCAATCCTCTGAAAGCTTAAAATTCACCTGCAAACTTCAGCGTACTGGCAATCTTGCTTGGTCCAAATACTGGTTATACAAATTCAAGTTTCTATGGTTCATTCCCTTGAAGCTATTACTCGTCATGACTTATGATCCCCTTTTCTGAACATTCCTAAGTTTGTCAAGACTTCAAAATTTTCACCTTTCTCAAAGGGATTCTCCAAATCATGATTAACCTACACTTGAGAGATTGAGATTGTTATGGCAATTTTCAAAATCTTGTTGCTCTGTGTTTGAGAAAGTCTTTATTCCAATACAAGTATTAGTGGAAGCCACTTACAGAACTCCCTCTTTCAGCAACAGTAAAATTTCTCTTTTTGAAAAATAATCTTCTAGTGCATTCCTTTGTGTGTTGTTTATTGAAGCTTCCTTTACCGAGTCGAGGTTTGCTTTTATGAATGAACTTTTAGTTTAGACTACACAACTTGATGGGGAGCTGAAATTGGTTCGTCATGAAATGGTTCTTTGTAGAGTAGAATACCTTCAAAAGAAGTTAGAGATTCTTCTATAATACAAACAAGAGCTCAGTCATGCTTATTTTTCCATTTCTCAAAATGGTAGCAAAATTCAATAAATCATTTTTTATCGGGGTGTTTCGTTCGGTCTATGAAAAGTTCGTTCATGGTGGTTCTCTATATAGTTGCCTTTATTGTTCATAATTTTTCCTTTTTGCTCCATTTGGGAGTTTGATCCTAATCCTTTTCAGTATATCAAATGATAGTTGTTACTTGTTCCAAAAAAGAACTTCTGAATGCTGAATTTTTGTTTCTTAGGGAACTGCTGCAACAAAGGTAAAGATGGCCCAAAAGGAGGCACAAGGGGTAGCTGAAAAGAGGAAAGGGAGAAGAGGACCCAGTAGCGTAATAGGATCGAGTGCTGCTGGTTGTGTTTGTGCTTTCCTCATGATAAATAAAGTTGGGGGACAAACATTCGCGCAATTATGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGGGTGACACTGTCTCAAGTGAAATAGGGAAGGGATATGGTAGGATAACGTGAGTAATTCCACATCTTTACTTCGACTGTATCATACCCAAGGTTATGGTTTTTGTAGACTTGCTTCGTTAGCAATATGTGTCACCATGGCCAAACAACAAACAAGTTGTCACAGCCAGGTACATTATTTATTACAAATAGTATTTTATCTTTCTTTTGCTTTATTAGTCTTTAAATGTAGAATGTGCACCATCGGACGTGTTTGTTGTTGTGGCAAAAGATAATGTTTGATGCTAGTAGTTCGATATCTTAGTCAAACCCTATGAATGTTAAATTATGCCTCCACGTGGAAAAGGGACTGTTAGGTGCGGTAAAGGACGGGAAACCCCACCTGAAGAAGAACCACACTAGACCAAGTTGGTCATCGAATTAAGGATCCACTCTTGGAACAGTCGGCAAGGCAGACAAAGCCTAATCATGTGGTTGCAATTTAAGAGAGTTCTTCAAAAGTATTACCCGACAATTAACTAATTCAGGAACAAATGAAAAAACGGAGTTTCTGAGTTTGAAGCAAGGTTGCTACTGTAGGCTAGGCATGTTCCATCGGTGTATCCTCAGTTTGATCATTAACCGGGTCTAGTGGGGGTGCTACTTCATGTGGGGTTACCTACCCCTCAACCAACCACGCCTAGCAGTCCTTCTACATGGAAGCATAATCAACATTGTTCGAGTAATTTATTGAACTACTAACATCGACCGTTCAGTGTTCTTTTGCCACAACAACAAACATGTTGGATCATGCACATTCGACATTTAAATACTAATAAAGCAAAATAAAAAGAAAAATACTATTTATTACAAATAATGTACCAGGTTGTTTTCCAAACATGTTCATCTTGAACCATTTTTAAGATGTTTTCCAAAGTTTTAAGTAAATGTCCGAATTCTTCATTTACCTTTTCTACTAATTATCAATTTTCTTGAGTTTGCAGTTTTCTGAAGAATTTTCTAACTAGTCTTCATTATATATCAAATGAACAATATATAGTTTATACGTGGAATGGGAATCCTTAATCTGTTTGGACCTCTTTAAATATAATTATATGGGGTTTTGTTTCTTCAGTTCTTTCCTGGTTATACTGATGCTTCGTTTATAACCAGGTACCTGGTGACGACATTTAAGGTAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTGGACTCTTAGCAGCAATTGCTCTTGCCTTCGTTGGCTATCTTTTGGGTGACGTAATTTTCTTTTGTTGTTCCTGTCACACCCTGAACTATACTGCAGCTCTACTTCTTATGAATATTCCCTCATGTCTTATAATCGTTCCTTGCTCATTTGGAGCATGGCTTGAAAGCTCGTTGAAACTGCGTATTTAAGAATTTTCCATATTTTAAGAACTTTACTGGCTAATTACAGGCTCCTTCTGGAGTTTTAACGAGTCCTTCCCCCAATTATATCTCTATGAAAATTATACATTGTTCGTCTTCTTGGATGCACATTTAGATTTCTCTTTGGATGATGATGCAGGTTACTGCACCTGAAGCAATTGTATGTGCTATAGCTTCACAGATTGCTAATGTTAGTGAAAGCTTCATCGGTGCTGTATTTCAAGGGAAGGAGGGATTTCGGTGGGTAAGTACTAAAGTTTTTTTTTATCACTGATTGCCTTACATTTGAGTCTGTTGTTTGTTTATGAATTGAACTCTTCTGCTGTTATTGCTTGTTCTCGTGTATTGTTGGCTTAGTCATCATGAATAATGGGTTCAGGTCTGAAAGCGGCTAAGTAATTTAAATCTTAAAGCACCTGCAAAATTAGTAGGTAGATATAAAGCATTCAGATATCAGTTGAAAAACCACCTTGATCATCAATGCACTATCCCATCCAATTCGAAAAGGCTAATTTTTCCTACATTATAATGAAGCTCCTTCCCCTCTCTTCTCCAACATGTCTCCCGGGTTTTACTTCTTCAATCTGCCTTGTTCTGGAAAACTACTGTTCTGATTCATTCGAATTCTGTTTGCAGCTCAATAATGATGTTGTTAATGTCATCAACATATCCATAGGCAGCATTTTAGCTATGTTGATGCAGCAGCTCCTACTTGGTCATTGACATTCATAATGCGACGCACCTTCAAGAGTTGACGACTTGGCGTTCTCTTGTATTTCCATTCAACTGACAGAAAAAAAAATATATAAGAAAACTACAGCTGATGGAGGGGAAGACCAAATCCTACCCTTGGAACTGTCCCGAGTGATTGCTTCAATTAAATTCTTGCTTCGAGAATGGCCACTGGTATTCGACAGCAGTGAACGAAATGCAGTTTCAGGGTAA

mRNA sequence

GCATTGATGGCTGCAACTTTTCCTCTTCCCCTTCATCCTTCTCCCAAACTCATCAATTTCCCCTTTTACGTCTTCTCTCATAAACCCTAATTCCCAATTCGAGCCCTAACCGATCCGTTAAGATGGTCGTCCCAGCTGAGAATTTTCAGAGCATAGCTTCCGCCGCTGTCAATCTTGTTCAATCGAGCCCAGACACGTGGCAGTCGGCCTTACTCAGCAACCTGCTGATTTTCGTCGTGGGTTTGCCGATTCTGGTCACGGGGTTGTCTGTTTCTGGCATTGCTTCTGCTTTCTTGCTTGGTACACTCACGTGGCGTGCTTTTGGGCCCTCTGGTTTCCTTCTTGTTGCTACCTATTTCATCATTGGAACTGCTGCAACAAAGGTAAAGATGGCCCAAAAGGAGGCACAAGGGGTAGCTGAAAAGAGGAAAGGGAGAAGAGGACCCAGTAGCGTAATAGGATCGAGTGCTGCTGGTTGTGTTTGTGCTTTCCTCATGATAAATAAAGTTGGGGGACAAACATTCGCGCAATTATGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGGGTGACACTGTCTCAAGTGAAATAGGGAAGGGATATGGTAGGATAACGTACCTGGTGACGACATTTAAGGTAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTGGACTCTTAGCAGCAATTGCTCTTGCCTTCGTTGGCTATCTTTTGGGTGACGTTACTGCACCTGAAGCAATTGTATGTGCTATAGCTTCACAGATTGCTAATGTTAGTGAAAGCTTCATCGGTGCTGTATTTCAAGGGAAGGAGGGATTTCGGTGGCTCAATAATGATGTTGTTAATGTCATCAACATATCCATAGGCAGCATTTTAGCTATGTTGATGCAGCAGCTCCTACTTGAAAAAAAAATATATAAGAAAACTACAGCTGATGGAGGGGAAGACCAAATCCTACCCTTGGAACTGTCCCGAGTGATTGCTTCAATTAAATTCTTGCTTCGAGAATGGCCACTGGTATTCGACAGCAGTGAACGAAATGCAGTTTCAGGGTAA

Coding sequence (CDS)

ATGGTCGTCCCAGCTGAGAATTTTCAGAGCATAGCTTCCGCCGCTGTCAATCTTGTTCAATCGAGCCCAGACACGTGGCAGTCGGCCTTACTCAGCAACCTGCTGATTTTCGTCGTGGGTTTGCCGATTCTGGTCACGGGGTTGTCTGTTTCTGGCATTGCTTCTGCTTTCTTGCTTGGTACACTCACGTGGCGTGCTTTTGGGCCCTCTGGTTTCCTTCTTGTTGCTACCTATTTCATCATTGGAACTGCTGCAACAAAGGTAAAGATGGCCCAAAAGGAGGCACAAGGGGTAGCTGAAAAGAGGAAAGGGAGAAGAGGACCCAGTAGCGTAATAGGATCGAGTGCTGCTGGTTGTGTTTGTGCTTTCCTCATGATAAATAAAGTTGGGGGACAAACATTCGCGCAATTATGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGGGTGACACTGTCTCAAGTGAAATAGGGAAGGGATATGGTAGGATAACGTACCTGGTGACGACATTTAAGGTAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTGGACTCTTAGCAGCAATTGCTCTTGCCTTCGTTGGCTATCTTTTGGGTGACGTTACTGCACCTGAAGCAATTGTATGTGCTATAGCTTCACAGATTGCTAATGTTAGTGAAAGCTTCATCGGTGCTGTATTTCAAGGGAAGGAGGGATTTCGGTGGCTCAATAATGATGTTGTTAATGTCATCAACATATCCATAGGCAGCATTTTAGCTATGTTGATGCAGCAGCTCCTACTTGAAAAAAAAATATATAAGAAAACTACAGCTGATGGAGGGGAAGACCAAATCCTACCCTTGGAACTGTCCCGAGTGATTGCTTCAATTAAATTCTTGCTTCGAGAATGGCCACTGGTATTCGACAGCAGTGAACGAAATGCAGTTTCAGGGTAA

Protein sequence

MVVPAENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFLMINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLNNDVVNVINISIGSILAMLMQQLLLEKKIYKKTTADGGEDQILPLELSRVIASIKFLLREWPLVFDSSERNAVSG
Homology
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BLAST of CmaCh04G006610 vs. Swiss-Prot
Match: VTE6_ARATH (Protein VTE6, chloroplastic OS=Arabidopsis thaliana GN=VTE6 PE=1 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.9e-103
Identity = 193/265 (72.83%), Postives = 227/265 (85.66%), Query Frame = 1 

Query: 5   AENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTW 64
           A + + + + A+ L+QS+  TW+SA+ +NLLIFV+G P+LVTGLS SGIA+AFLLGTLTW
Sbjct: 65  AASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTW 124

Query: 65  RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFL 124
           RA+G +GFLLVA YF+IGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFL
Sbjct: 125 RAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFL 184

Query: 125 MINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVS 184
            I +VGG  F+QL+RLGFV+SFCTK+ DTVSSEIGK YG+ TYL TTFK+VPRGTEGA+S
Sbjct: 185 SIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMS 244

Query: 185 LEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLN 244
           LEGT AGLLA+  LA VG  LG +T PEA VC +ASQIAN+ ES IGA FQ KEGF+WLN
Sbjct: 245 LEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLN 304

Query: 245 NDVVNVINISIGSILAMLMQQLLLE 270
           NDVVNVINIS+GSI+A+LMQQ +L+
Sbjct: 305 NDVVNVINISLGSIVAILMQQFILQ 329

[Close]
BLAST of CmaCh04G006610 vs. Swiss-Prot
Match: Y875_SYNY3 (Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.9e-44
Identity = 107/243 (44.03%), Postives = 149/243 (61.32%), Query Frame = 1 

Query: 20  QSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYF 79
           QS    W SA++ N  +  +        L+  G   A++LG + W A G  G+L+V  YF
Sbjct: 12  QSLAFPWLSAVILNSFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYF 71

Query: 80  IIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFLMINKVGGQTFAQLW- 139
            +G+A T++   +KEA G+AEKR G+RGP +V GS+    +CA  +     G    QLW 
Sbjct: 72  FVGSAVTRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAI---AFGPEPWQLWL 131

Query: 140 RLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIAL 199
            LG+VASF TKL DT +SE+GK YG+ T+L+TT + VPRGTEGAVS+EGT AG  A +AL
Sbjct: 132 ALGYVASFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGTLAGFAAGLAL 191

Query: 200 AFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLNNDVVNVINISIGSI 259
           A +GY +G ++    I   +A+ IA   ES IGA  Q K  + WL N+VVN IN  +G+ 
Sbjct: 192 AVLGYGVGLISFGGIIFSTLAAFIATNLESVIGATLQNK--WPWLTNEVVNGINTFLGAA 249

Query: 260 LAM 262
           +A+
Sbjct: 252 IAI 249

[Close]
BLAST of CmaCh04G006610 vs. Swiss-Prot
Match: Y933_METJA (Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.3e-16
Identity = 74/237 (31.22%), Postives = 130/237 (54.85%), Query Frame = 1 

Query: 31  LSNLLIFVVGLPILVTG-LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFIIGTAATKVK 90
           +S L+I V+ L I  +  L   G+  + ++G +     G    +L+ ++FI+G   ++V 
Sbjct: 14  VSILIICVLALMIKKSRCLDNEGVIGSSIMGFILLYFCGFKYLILLLSFFILGVLVSRVG 73

Query: 91  MAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFLMINKVGGQTFAQLWRL-GFVASFCT 150
           + +K+A+ + E  +  +   +V+ +     + A L I       F   W L G+++S   
Sbjct: 74  LEKKKAKKMDETCRSLK---NVLANGLIPILFAILAI-------FGFNWALIGYISSIAA 133

Query: 151 KLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGYLL-GD 210
              DT SSE+G        L+TTF+VV +GT+GA+++ GT AG+L A  +   GYLL GD
Sbjct: 134 ATSDTFSSELGILSNEKPRLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGLFGYLLFGD 193

Query: 211 VTAPEAIVCAIASQIA-NVSESFIGAVFQGKEGFRWLNNDVVNVINISIGSILAMLM 264
           +   + ++C  A  IA N+++S +GA+F+ K     LNN+ VN+I   +G I+ +L+
Sbjct: 194 I---KIVLCGTAGGIAGNLADSLVGALFERK---GILNNEHVNLIATIVGGIIGVLI 234

[Close]
BLAST of CmaCh04G006610 vs. TrEMBL
Match: A0A0A0KVG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083590 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 7.8e-120
Identity = 232/268 (86.57%), Postives = 249/268 (92.91%), Query Frame = 1 

Query: 1   MVVPAENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLG 60
           MVV A++F+++AS AVNL+QS+P TW SALLSNLLIF++G PILV+GLS SGIASAFLLG
Sbjct: 44  MVVRAQSFETLASGAVNLLQSNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLG 103

Query: 61  TLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCV 120
           TLTWRAFGPSGFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCV
Sbjct: 104 TLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCV 163

Query: 121 CAFLMINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTE 180
           CA LMINKVGG+ FAQLWRLGFVASFCTKL DTVSSEIGK YGRITYLVT FKVVPRGTE
Sbjct: 164 CAVLMINKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTE 223

Query: 181 GAVSLEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGF 240
           GAVSLEGTFAGLLAAIALAFVG LLGDVTA EAIVC IASQIAN+ ES IGAV Q KEGF
Sbjct: 224 GAVSLEGTFAGLLAAIALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGF 283

Query: 241 RWLNNDVVNVINISIGSILAMLMQQLLL 269
           +WLNNDVVNVINIS+GSILA+LMQQL+L
Sbjct: 284 QWLNNDVVNVINISMGSILAVLMQQLIL 311

[Close]
BLAST of CmaCh04G006610 vs. TrEMBL
Match: B9T1K0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0216620 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.8e-108
Identity = 205/263 (77.95%), Postives = 233/263 (88.59%), Query Frame = 1 

Query: 5   AENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTW 64
           A + Q   S A+NL+QS+P TWQSAL++N+LIF++G PIL++GLS+SGI +AFLLGTLTW
Sbjct: 53  AVSMQGALSGAMNLIQSAPPTWQSALVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTW 112

Query: 65  RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFL 124
           RAFGPSGFLLVA YF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFL
Sbjct: 113 RAFGPSGFLLVACYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 172

Query: 125 MINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVS 184
            I  VGG+ F++LW LGFVASFCTKL DTVSSEIGK YG+ITYLVTTFK+VPRGTEGAVS
Sbjct: 173 SIYGVGGEAFSRLWELGFVASFCTKLSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVS 232

Query: 185 LEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLN 244
           +EGT AGLLA+I LA +G  LG++  PEA++C IASQIANV ES IGA FQ KEGFRWLN
Sbjct: 233 VEGTLAGLLASILLASIGCFLGEIHIPEAVICVIASQIANVGESIIGATFQEKEGFRWLN 292

Query: 245 NDVVNVINISIGSILAMLMQQLL 268
           NDVVNV+NISIGSILA+LMQQLL
Sbjct: 293 NDVVNVLNISIGSILAVLMQQLL 315

[Close]
BLAST of CmaCh04G006610 vs. TrEMBL
Match: A0A068UBW1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021402001 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 5.2e-108
Identity = 204/261 (78.16%), Postives = 233/261 (89.27%), Query Frame = 1 

Query: 10  SIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTWRAFGP 69
           S+   A+ LV+SSP TWQS+LLSNLLIF++G PILV+GLS+SGIA+AFLLGTLTWRAFGP
Sbjct: 13  SLVQQAIKLVRSSPPTWQSSLLSNLLIFILGSPILVSGLSLSGIAAAFLLGTLTWRAFGP 72

Query: 70  SGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFLMINKV 129
           SGF LVA+YF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCVCA L I ++
Sbjct: 73  SGFFLVASYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLSIYRI 132

Query: 130 GGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVSLEGTF 189
           GG+ F+ LW LGFVASFCTKL DTVSSEIGK YGR TYLVTTFKVVPRGTEGAVS+EGT 
Sbjct: 133 GGKAFSPLWLLGFVASFCTKLSDTVSSEIGKAYGRTTYLVTTFKVVPRGTEGAVSVEGTL 192

Query: 190 AGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLNNDVVN 249
           AGLLA+I LA VG L+G++   EAI+C +ASQIAN+ ESFIGA FQGKEGF+WLNND VN
Sbjct: 193 AGLLASILLASVGCLMGNIKPSEAIICVVASQIANLGESFIGAEFQGKEGFKWLNNDAVN 252

Query: 250 VINISIGSILAMLMQQLLLEK 271
           +INIS+GSILA+LMQQL+L+K
Sbjct: 253 IINISLGSILAVLMQQLILQK 273

[Close]
BLAST of CmaCh04G006610 vs. TrEMBL
Match: M5WGB4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008701mg PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.5e-107
Identity = 206/265 (77.74%), Postives = 233/265 (87.92%), Query Frame = 1 

Query: 5   AENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTW 64
           A + QS  S  ++L+QSSP TWQSA+LSNLLIF++G PILV+GLSVSGIA+AFLLGTLTW
Sbjct: 54  AASVQSAVSEVMSLIQSSPPTWQSAILSNLLIFLLGSPILVSGLSVSGIAAAFLLGTLTW 113

Query: 65  RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFL 124
           RAFG SGFLLVATYF+IGTA TKV+MAQKEA+GVAEKRKGRRGP SVIGSSAAGC+CAFL
Sbjct: 114 RAFGSSGFLLVATYFVIGTAVTKVRMAQKEAEGVAEKRKGRRGPGSVIGSSAAGCICAFL 173

Query: 125 MINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVS 184
            I   GG  +++LW+LGFVASFCTKL DTVSSEIGK YG+ TYLVTT KVVPRGTEGAVS
Sbjct: 174 AIFGAGGIGYSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKVVPRGTEGAVS 233

Query: 185 LEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLN 244
           +EGTFAGLLAAI LAFVG L+G++TAPEAI+C IASQIAN  ES IGA  Q KEGFRWLN
Sbjct: 234 VEGTFAGLLAAILLAFVGGLMGEITAPEAIICVIASQIANFGESIIGAALQDKEGFRWLN 293

Query: 245 NDVVNVINISIGSILAMLMQQLLLE 270
           ND VNVINIS+GSILA+ MQQ+LL+
Sbjct: 294 NDAVNVINISMGSILAVFMQQVLLQ 318

[Close]
BLAST of CmaCh04G006610 vs. TrEMBL
Match: F6H2K7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00380 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106
Identity = 202/264 (76.52%), Postives = 229/264 (86.74%), Query Frame = 1 

Query: 4   PAENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLT 63
           P   F+   S A+ L+QSSP TW+SALL+N LIF+ G PILV+GLS+SGIA+AFLLGTLT
Sbjct: 49  PVPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLT 108

Query: 64  WRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAF 123
           WRAFG  GFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCVCAF
Sbjct: 109 WRAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAF 168

Query: 124 LMINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAV 183
           L I  VGG+ F QLW+LGFVASFCTKL DTVSSEIGK YG+ TYLVTT K+VPRGTEGAV
Sbjct: 169 LSIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAV 228

Query: 184 SLEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWL 243
           S EGT AGLLA+I LAFVG L+G + A EA++C +A+QIAN+ ESFIGA  QGKEGFRWL
Sbjct: 229 SAEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFIGAALQGKEGFRWL 288

Query: 244 NNDVVNVINISIGSILAMLMQQLL 268
           NNDVVNVINIS+GSILA+L+Q++L
Sbjct: 289 NNDVVNVINISMGSILAILIQKIL 312

[Close]
BLAST of CmaCh04G006610 vs. TAIR10
Match: AT1G78620.2 (AT1G78620.2 Protein of unknown function DUF92, transmembrane)

HSP 1 Score: 369.4 bits (947), Expect = 2.2e-102
Identity = 193/274 (70.44%), Postives = 227/274 (82.85%), Query Frame = 1 

Query: 5   AENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTW 64
           A + + + + A+ L+QS+  TW+SA+ +NLLIFV+G P+LVTGLS SGIA+AFLLGTLTW
Sbjct: 65  AASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTW 124

Query: 65  RAFGPSGFLLVATYFII---------GTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSS 124
           RA+G +GFLLVA YF+I         GTAATKVKM QKEAQGVAEKRKGRRGP SVIGSS
Sbjct: 125 RAYGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSS 184

Query: 125 AAGCVCAFLMINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVV 184
           AAGCVCAFL I +VGG  F+QL+RLGFV+SFCTK+ DTVSSEIGK YG+ TYL TTFK+V
Sbjct: 185 AAGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIV 244

Query: 185 PRGTEGAVSLEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQ 244
           PRGTEGA+SLEGT AGLLA+  LA VG  LG +T PEA VC +ASQIAN+ ES IGA FQ
Sbjct: 245 PRGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQ 304

Query: 245 GKEGFRWLNNDVVNVINISIGSILAMLMQQLLLE 270
            KEGF+WLNNDVVNVINIS+GSI+A+LMQQ +L+
Sbjct: 305 DKEGFKWLNNDVVNVINISLGSIVAILMQQFILQ 338

[Close]
BLAST of CmaCh04G006610 vs. NCBI nr
Match: gi|449438893|ref|XP_004137222.1| (PREDICTED: uncharacterized protein LOC101208301 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 1.1e-119
Identity = 232/268 (86.57%), Postives = 249/268 (92.91%), Query Frame = 1 

Query: 1   MVVPAENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLG 60
           MVV A++F+++AS AVNL+QS+P TW SALLSNLLIF++G PILV+GLS SGIASAFLLG
Sbjct: 44  MVVRAQSFETLASGAVNLLQSNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLG 103

Query: 61  TLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCV 120
           TLTWRAFGPSGFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCV
Sbjct: 104 TLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCV 163

Query: 121 CAFLMINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTE 180
           CA LMINKVGG+ FAQLWRLGFVASFCTKL DTVSSEIGK YGRITYLVT FKVVPRGTE
Sbjct: 164 CAVLMINKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTE 223

Query: 181 GAVSLEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGF 240
           GAVSLEGTFAGLLAAIALAFVG LLGDVTA EAIVC IASQIAN+ ES IGAV Q KEGF
Sbjct: 224 GAVSLEGTFAGLLAAIALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGF 283

Query: 241 RWLNNDVVNVINISIGSILAMLMQQLLL 269
           +WLNNDVVNVINIS+GSILA+LMQQL+L
Sbjct: 284 QWLNNDVVNVINISMGSILAVLMQQLIL 311

[Close]
BLAST of CmaCh04G006610 vs. NCBI nr
Match: gi|659101669|ref|XP_008451729.1| (PREDICTED: uncharacterized protein LOC103492936 [Cucumis melo])

HSP 1 Score: 436.4 bits (1121), Expect = 4.2e-119
Identity = 230/268 (85.82%), Postives = 247/268 (92.16%), Query Frame = 1 

Query: 1   MVVPAENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLG 60
           MVV A++F ++AS A NL+QS+P TWQSALLSNLLIFV+G PILV+GLS+SGIASAFLLG
Sbjct: 44  MVVRAQSFHTLASGAFNLLQSNPSTWQSALLSNLLIFVLGSPILVSGLSLSGIASAFLLG 103

Query: 61  TLTWRAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCV 120
           TLTWRAFGPSGFLLVATYF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCV
Sbjct: 104 TLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCV 163

Query: 121 CAFLMINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTE 180
           CA LMINKVGG+ F+QLWRLGFVASFCTKL DTVSSEIGK YGRITYLVT FKVVPRGTE
Sbjct: 164 CAVLMINKVGGEAFSQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTE 223

Query: 181 GAVSLEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGF 240
           GAVSLEGTFAGLLAAI LA  G LLGDVTAPEAIVC IASQIAN+ ES IGAV Q KEGF
Sbjct: 224 GAVSLEGTFAGLLAAITLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGF 283

Query: 241 RWLNNDVVNVINISIGSILAMLMQQLLL 269
           +WLNNDVVNVINIS+GSILA+LMQQL+L
Sbjct: 284 QWLNNDVVNVINISMGSILAVLMQQLIL 311

[Close]
BLAST of CmaCh04G006610 vs. NCBI nr
Match: gi|255582681|ref|XP_002532119.1| (PREDICTED: uncharacterized membrane protein sll0875 [Ricinus communis])

HSP 1 Score: 400.6 bits (1028), Expect = 2.6e-108
Identity = 205/263 (77.95%), Postives = 233/263 (88.59%), Query Frame = 1 

Query: 5   AENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTW 64
           A + Q   S A+NL+QS+P TWQSAL++N+LIF++G PIL++GLS+SGI +AFLLGTLTW
Sbjct: 53  AVSMQGALSGAMNLIQSAPPTWQSALVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTW 112

Query: 65  RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFL 124
           RAFGPSGFLLVA YF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCVCAFL
Sbjct: 113 RAFGPSGFLLVACYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFL 172

Query: 125 MINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVS 184
            I  VGG+ F++LW LGFVASFCTKL DTVSSEIGK YG+ITYLVTTFK+VPRGTEGAVS
Sbjct: 173 SIYGVGGEAFSRLWELGFVASFCTKLSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVS 232

Query: 185 LEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLN 244
           +EGT AGLLA+I LA +G  LG++  PEA++C IASQIANV ES IGA FQ KEGFRWLN
Sbjct: 233 VEGTLAGLLASILLASIGCFLGEIHIPEAVICVIASQIANVGESIIGATFQEKEGFRWLN 292

Query: 245 NDVVNVINISIGSILAMLMQQLL 268
           NDVVNV+NISIGSILA+LMQQLL
Sbjct: 293 NDVVNVLNISIGSILAVLMQQLL 315

[Close]
BLAST of CmaCh04G006610 vs. NCBI nr
Match: gi|661890553|emb|CDP06050.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 399.1 bits (1024), Expect = 7.5e-108
Identity = 204/261 (78.16%), Postives = 233/261 (89.27%), Query Frame = 1 

Query: 10  SIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTWRAFGP 69
           S+   A+ LV+SSP TWQS+LLSNLLIF++G PILV+GLS+SGIA+AFLLGTLTWRAFGP
Sbjct: 13  SLVQQAIKLVRSSPPTWQSSLLSNLLIFILGSPILVSGLSLSGIAAAFLLGTLTWRAFGP 72

Query: 70  SGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFLMINKV 129
           SGF LVA+YF+IGTAATKVKMAQKEAQGVAEKRKGRRGP SVIGSSAAGCVCA L I ++
Sbjct: 73  SGFFLVASYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLSIYRI 132

Query: 130 GGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVSLEGTF 189
           GG+ F+ LW LGFVASFCTKL DTVSSEIGK YGR TYLVTTFKVVPRGTEGAVS+EGT 
Sbjct: 133 GGKAFSPLWLLGFVASFCTKLSDTVSSEIGKAYGRTTYLVTTFKVVPRGTEGAVSVEGTL 192

Query: 190 AGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLNNDVVN 249
           AGLLA+I LA VG L+G++   EAI+C +ASQIAN+ ESFIGA FQGKEGF+WLNND VN
Sbjct: 193 AGLLASILLASVGCLMGNIKPSEAIICVVASQIANLGESFIGAEFQGKEGFKWLNNDAVN 252

Query: 250 VINISIGSILAMLMQQLLLEK 271
           +INIS+GSILA+LMQQL+L+K
Sbjct: 253 IINISLGSILAVLMQQLILQK 273

[Close]
BLAST of CmaCh04G006610 vs. NCBI nr
Match: gi|645239870|ref|XP_008226335.1| (PREDICTED: uncharacterized protein LOC103325927 [Prunus mume])

HSP 1 Score: 397.5 bits (1020), Expect = 2.2e-107
Identity = 205/265 (77.36%), Postives = 233/265 (87.92%), Query Frame = 1 

Query: 5   AENFQSIASAAVNLVQSSPDTWQSALLSNLLIFVVGLPILVTGLSVSGIASAFLLGTLTW 64
           A + QS  S  ++L+QSSP TWQSA+LSNLLIF++G PILV+GLSVSGIA+AFLLGTLTW
Sbjct: 54  AASVQSAVSEVMSLIQSSPPTWQSAILSNLLIFLLGSPILVSGLSVSGIAAAFLLGTLTW 113

Query: 65  RAFGPSGFLLVATYFIIGTAATKVKMAQKEAQGVAEKRKGRRGPSSVIGSSAAGCVCAFL 124
           RAFG SGFLLVATYF+IGTA TKV+MAQKEA+GVAEKRKGRRGP SVIGSSAAGC+CAFL
Sbjct: 114 RAFGSSGFLLVATYFVIGTAVTKVRMAQKEAEGVAEKRKGRRGPGSVIGSSAAGCICAFL 173

Query: 125 MINKVGGQTFAQLWRLGFVASFCTKLGDTVSSEIGKGYGRITYLVTTFKVVPRGTEGAVS 184
            I   GG  +++LW+LGFVASFCTKL DTVSSEIGK YG+ TYLVTT KVVPRGTEGAVS
Sbjct: 174 AIFGAGGTGYSRLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKVVPRGTEGAVS 233

Query: 185 LEGTFAGLLAAIALAFVGYLLGDVTAPEAIVCAIASQIANVSESFIGAVFQGKEGFRWLN 244
           +EGTFAGLLAAI LAFVG L+G++TAPEAI+C IASQIAN  ES IGA  Q KEGFRWLN
Sbjct: 234 VEGTFAGLLAAILLAFVGCLVGEITAPEAIICVIASQIANFGESIIGAALQDKEGFRWLN 293

Query: 245 NDVVNVINISIGSILAMLMQQLLLE 270
           ND VNVINIS+GSI+A+ MQQ+LL+
Sbjct: 294 NDAVNVINISMGSIIAVFMQQVLLQ 318

The following BLAST results are available for this feature:
BLAST of CmaCh04G006610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VTE6_ARATH1.9e-10372.83Protein VTE6, chloroplastic OS=Arabidopsis thaliana GN=VTE6 PE=1 SV=1[more]
Y875_SYNY39.9e-4444.03Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 /... [more]
Y933_METJA2.3e-1631.22Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain... [more]
BLAST of CmaCh04G006610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVG7_CUCSA7.8e-12086.57Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083590 PE=4 SV=1[more]
B9T1K0_RICCO1.8e-10877.95Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0216620 PE=4 SV=1[more]
A0A068UBW1_COFCA5.2e-10878.16Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021402001 PE=4 SV=1[more]
M5WGB4_PRUPE1.5e-10777.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008701mg PE=4 SV=1[more]
F6H2K7_VITVI1.7e-10676.52Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00380 PE=4 SV=... [more]
BLAST of CmaCh04G006610 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78620.22.2e-10270.44 Protein of unknown function DUF92, transmembrane[more]
BLAST of CmaCh04G006610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438893|ref|XP_004137222.1|1.1e-11986.57PREDICTED: uncharacterized protein LOC101208301 [Cucumis sativus][more]
gi|659101669|ref|XP_008451729.1|4.2e-11985.82PREDICTED: uncharacterized protein LOC103492936 [Cucumis melo][more]
gi|255582681|ref|XP_002532119.1|2.6e-10877.95PREDICTED: uncharacterized membrane protein sll0875 [Ricinus communis][more]
gi|661890553|emb|CDP06050.1|7.5e-10878.16unnamed protein product [Coffea canephora][more]
gi|645239870|ref|XP_008226335.1|2.2e-10777.36PREDICTED: uncharacterized protein LOC103325927 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002794DUF92_TMEM19
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048767 root hair elongation
biological_process GO:0008150 biological_process
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G006610.1CmaCh04G006610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002794Protein of unknown function DUF92, TMEM19PANTHERPTHR13353FAMILY NOT NAMEDcoord: 1..273
score: 3.1E
IPR002794Protein of unknown function DUF92, TMEM19PFAMPF01940DUF92coord: 36..256
score: 6.0
NoneNo IPR availablePANTHERPTHR13353:SF7SUBFAMILY NOT NAMEDcoord: 1..273
score: 3.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G006610Cucsa.273580Cucumber (Gy14) v1cgycmaB0766
CmaCh04G006610Cla002442Watermelon (97103) v1cmawmB696
CmaCh04G006610Csa4G083590Cucumber (Chinese Long) v2cmacuB708
CmaCh04G006610MELO3C016111Melon (DHL92) v3.5.1cmameB701
CmaCh04G006610ClCG07G010100Watermelon (Charleston Gray)cmawcgB675
CmaCh04G006610CSPI04G08030Wild cucumber (PI 183967)cmacpiB714
CmaCh04G006610CmoCh16G004560Cucurbita moschata (Rifu)cmacmoB703
CmaCh04G006610CmoCh04G007090Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G006610Lsi07G002920Bottle gourd (USVL1VR-Ls)cmalsiB697
CmaCh04G006610Cp4.1LG14g03570Cucurbita pepo (Zucchini)cmacpeB717
CmaCh04G006610Cp4.1LG01g00650Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G006610MELO3C016111.2Melon (DHL92) v3.6.1cmamedB790
CmaCh04G006610CsaV3_4G008250Cucumber (Chinese Long) v3cmacucB0841
CmaCh04G006610Cla97C07G136780Watermelon (97103) v2cmawmbB782
CmaCh04G006610Bhi01G002501Wax gourdcmawgoB0851
CmaCh04G006610Carg13093Silver-seed gourdcarcmaB0055
CmaCh04G006610Carg11355Silver-seed gourdcarcmaB0927
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G006610CmaCh16G004240Cucurbita maxima (Rimu)cmacmaB353
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G006610Watermelon (97103) v2cmawmbB778
CmaCh04G006610Wax gourdcmawgoB0847
CmaCh04G006610Wax gourdcmawgoB0858
CmaCh04G006610Cucurbita maxima (Rimu)cmacmaB352
CmaCh04G006610Cucumber (Gy14) v1cgycmaB0765
CmaCh04G006610Cucurbita moschata (Rifu)cmacmoB702
CmaCh04G006610Melon (DHL92) v3.5.1cmameB699
CmaCh04G006610Watermelon (Charleston Gray)cmawcgB672
CmaCh04G006610Cucurbita pepo (Zucchini)cmacpeB716
CmaCh04G006610Bottle gourd (USVL1VR-Ls)cmalsiB695
CmaCh04G006610Bottle gourd (USVL1VR-Ls)cmalsiB702
CmaCh04G006610Cucumber (Gy14) v2cgybcmaB541
CmaCh04G006610Melon (DHL92) v3.6.1cmamedB786
CmaCh04G006610Silver-seed gourdcarcmaB0926