Cp4.1LG14g02170 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g02170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Short-chain dehydrogenase
Location	Cp4.1LG14 : 3196950 .. 3207623 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTGTAATTTCATAGTCTAAAAAAACCTTGATTTCTTTTCAAAAGAGGGTTTATTCTAAAAGAAAACAAAACTTTTAGAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATCTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGTTTCGTTTCATCCCCTTCCCCTTTTTCTCCTTCTTCCCCTCTCTTTTAATCCCTTCTTTGATCTGGGTTTTGTTGTTTACAAAATCGATGGTGATTTAGTTTATTTATAGCAACCTGGATACCTTGTCTTTTGATTGGATTAAGGTTGTTTTGTTATTGACTCACTACTTGATTGCTATTTGTTTTGCAAATCTTTCTTGGGTATAATATGAATTCTGTGTTTTCTGAGCCCGTTCTGTAGCTGTTCTTGGACTGTTCAGTCTCAATCAAGTGTATATTTTGTATCCTTTATATGTAGAATGCAGAAATCTATGGAGTAATGGGGTTTTCTTTGAGGATTTATGTATAGATTGAGCTTTATTTGTTAGGTTTCTATACTTAGCATAATGTTTGTATGCTTAGAAACTGAAGCAGAAATGGAACTAGAATGTCCATTTGCAAGAATGTGCAAGTATATCAATCAAAGCATCACAAGTTTGGATGGACTTCTAAAAAAGTTTCTAGACATGGAGTTTGAAGCATGTTTGCTTTCAAAAGTTTCATTAATACTCGTAAACGGTTAAGAAATATCCATAACCTTACCGGTAGGATATGAATGGAAAACTTTTCCATTTTTCCCTCTTTTTTTACCATATCTTATTCAATATCCTCTTACTCCCCTTCTTTTGTTCTCCGATATCTAAAACGGCCCCTTCATTCAAGGTTATAGACTATAACAAGAAGAAGAAGAAAAAAATGGAATCACCAAGGGACCTTAGGACATAAATGTTTAACATGGTTATACGTTAGTAGTTGAGTGAGAGTTGATACGTTTACGACATAATTTTGAGGACAACTAGTGGGAGGAAAAAAGAAAGAAAACGTGTGCAATACCAAATTTGTAGAGATGAACTTTTCTTTGTAGTTCAAATTAGTCTATTTGTTGTCGTCGATTCAGAAGGTTTCTCAATAATCTAAGATGATATTTCTTTGTCAGCCTTTTTTGTATTCGACAATTCATCGTTTTGTTGTGTTTTGAGGGGAGATTCTGATATTGGGACTTGGTGGGGTTTTGTATAAGAAATTGTTAGGTTATAGATTGAAGCAAAGGAGAGAGGAAACGAAGGAGGGAGTTGATGGGTAAACGGTTTTCATCCATATACTAATCGTAAATGCATTTTGAGCTATTTTTTTTTGGAAAGGTTAAGGGTAATCAAACTCTTTTCGAGCTGATTTGGGAAGGAAACTGTAACGGCTCAAGCCCACCGCTAACAGATATTGCTTCCCTTCAACGCTTTAAAACTCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACTAATGTGGGATATCACAATCCACCCCCCTTCAGGGCCCAGCGTCCTCAGTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCCCTTCAAGGCCCAGTGTCCTTACTGGCCCACTGCCTCGTGTCTACTCCCCTTCGGGGAACAACCTCCTCCCTGGCATATCGCTCGGTACTTGACTCTGATACCATCTGTAACGGCCCAAGCCCATCGCTAGCAGATATTGTCCTCTTTGAGTTTTCTCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAGAGATTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATTTAAATATTTTTATAGTTCAAATTTAGATATAAAATAGAAAACTGCAAAAGTTTTTTGAAGTTAAAAAATCAAGTAAAAAAAAAAACACTAAATGATTTTAATCAAAGTGTCAACTGTCAAGTCTAGATCTCTTCCAACCATGTGGGTGAAAGGATAGTTCCAAGAACATGGGAAAGGAGGAAACCGAACGACAATAAATGTCTTATTAAAAAACCAAGGCTTGTTTTTGCAGTACTAGGAGCAACCAAAGTACTGTTTTACAACGTTGTCTTGGCTGCAATTAATAAGTTACGTCAAAGTGCACTAAAATCAGCCATCAATATTTCAACAATTAATTTTGGACTTTCAAACATTATATTTCATCTAAAAATACTTCATTAAATTCAGATTGGATGTCAAGAAAATTCAAACTTCGATAGAAAATCTATAATTATTGATCAAATTCCTAAATGTCAACTAAAAAACGGGTTTAGACTCAATAAAAAAAAAAAAAAACTAAATGATTATAATCAAAGTGTCAAACTGTCGAGTCTAGATCTCTTCCAACCATGTGGGTGAAAGGATAGTTCCAAGAACATGGGAAAGGAGGAAACCAAACGACAATAAATGTCTTAATCAAAAACCAAGGCTTGTTTTTGCAGTACTAGGAGCAACCAAAGTACTGTTTTACAATGTTGTCTTGGCTGCAATTAATAAGTTAGGTCAAAGTGGCACTAAAATCAGCCATCAATATTTCAACAATTAATTTTAGACTTTGAAACATTATATTTCATCTAAAAATACTTCTTCGGATTGGATGTCATGAAAATTCAAATTTCTATAGAAAATCTATAATTATTGACCAAATTCCTAAATGTCAACTAAAAAACGGGTTTAGACTCAAAATTGAGAACCTCCAACTATAGATAGAAAAATTCTCATATGAAAAACGATGATTCTCGATCCTAATATTATGTTAAGCATACCATCAAATAAAATCAATCTAAAATACGGAGAGAAGATCAAGAAATGAACCCATTTGATCCGCTCTTAGCCACTAAAGTTTTGATTTTTTTGGCTCACAAATAGACTGAAAAATCAGTGAAACCAATCAGAAACAACTATAGATAGAGAAATTTTCATATGAAAAACATGATTCTCGATCTTAATATTATGTTAAGCAGACCATCAAATAAAATCAATCTAAAACACGGATAAAAAATCAAGAAATCAACTTATTTGCCTCCCTACTCTTAGTCACTAAAATTTTGATTTTTTTGGCTCACCCATAATCATAAACAACTAACCCAGTTGTAATTCATGATAAATTTTCCAAATCACAGTTTTATTCAGAGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTGTAATTTCATAGTCTAAAAAAACCTTGATTTCTTTTCAAAAGAGGGTTTATTCTAAAAGAAAACAAAACTTTTAGAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATTTGTATTTGTATCGATCTCAACCATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGTTTCGTTTCATCCCCTTCCCCTTTTTCTCCTTCTTCCCCTCTCTTTTAATCCCTTCTTTGATCTGGGTTTTGTTGTTTACAAAATCGATGGTGATTTAGTTTATTTATAGCAACCTGGATACCTTGTCTTTTGATTGGATTAAGGTTGTTTTGTTATTGACTCACTACTTGATTGCTATTTGTTTTGCAAATCTTTCTTGGGTATAATATGAATTCTGTGTTTTCTGAGCCCGTTCTGTAGCTGTTCTTGGACTGTTCAGTCTCAATCAAGTGTATATTTTGTATCCTTTATATGTAGAATGCAGAAATCTATGGAGTAATGGGGTTTTCTTTGAGGATTTATGTATAGATTGAGCTTTATTTGTTAGGTTTCTATACTTAGCATAATGTTTGTATGCTTAGAAACTGAAGCAGAAATGGAACTAGAATGTCCATTTGCAAGAATGTGCAAGTATATCAATCAAAGCATCACAAGTTTGGATGGACTTCTAAAAAAGTTTCTAGACATGGAGTTTGAAGCATGTTTGCTTTCAAAAGTTTCATTAATACTCGTAAACGGTTAAGAAATATCCATAACCTTACCGGTACTATATGAATGGAAAACTTTTCCATTTTTCCCTCTTTTTTTACCATATCTTATTCAATATCCTCTTACTCCCCTTCTTTCGTTCTCCGATATCTAAAACGGCCCCTTCATTCAAGGTTATAGACTATAACAAGAAGAAGAAGAAAAAAATGGAATCACCAAGGGACCTTAGGACATAAATGTTTAACATGGTTATACGTTAGTAGTTGAGTGAGAGTTGATACGTTTACGACATAATTTTGAGGACAACTAGTGGGAGGAAAAAAGAAAGAAAACGTGTGCAATACCAAATTTGTAGAGATGAACTTTTCTTTGTAGTTCAAATTAGTCTATTTGTTGTCGTCGATTCAGAAGGTTTCTCAATAATCTAAGATGATATTTCTTTGTCAGCCTTTTTTGTATTCGACAATTCATCGTTTTGTTGTGTTTTGAGGGGAGATTCTGATATTGGGACTTGGTGGGGTTTTGTATAAGAAATTGTTAGGTTATAGATTGAAGCAAAGGAGAGAGGAAACGAAGGAGGGAGTTGATGGGTAAACGGTTTTCATCCATATACTAATCGTAAATGCATTTTGAGCTATTTTTTTTTGGAAAGGTTAAGGGTAATCAAACTCTTTTCGAGCTGATTTGGGAAGGAAACTGTAACGGCTCAAGCCCACCGCTAACAGATATTGCTTCCCTTCAACGCTTTAAAACTCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACTAATGTGGGATATCACAATCCACCCCCCTTCAGGGCCCAGCGTCCTCAGTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCCCTTCAAGGCCCAGTGTCCTTACTGGCCCACTGCCTCGTGTCTACTCCCCTTCGGGGAACAACCTCCTCCCTGGCATATCGCTCGGTACTTGACTCTGATACCATCTGTAACGGCCCAAGCCCATCGCTAGCAGATATTGTCCTCTTTGAGTTTTCTCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAGAGATTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGATACCACAGAAACAGTCCAATGAATTTCTAGATTTAGTTCTCATATGTTCGATTTTTCTATATACTTTTCTCTAATCATTCACTTCAAATGTTTCATTTTGATCTATAGAAGATCTTAATCTAAAGAACTGTTGAAGTTTTCCAACTTCGAAACATGTAGTTCATTTCCCTTTCCTTCCTCATGATTTCAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAAGAATCCCCTTCAGCCAAAATTGATGTCATGGAGTTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGTAAGAACTGAATTAAAGCTGGTAGACTAAAATTCTTTGCCTGGGAAATCTGCTTATTTGATAATAATACAACTCTATATCTTCTTTGATTGAAGGAACAATGCGGGCGTTATGGCGACGCCTTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGTATGTTTCAAATAAAAGATTTGTAATGGGTGCAGTTCTTATTATTGTTCTTTTGTAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTAACGATCTACGTTGCTTATTTGATGATTACTTCCTCAAAAGCTTCCTTGAATGTTATGTAGTGATTCATTGTATGATGTGAAATTTTAGGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGTGCTTATTGGTTTAGTTATTGAATGTATAACCAGAGCTTTAGAACTTGAACCTTAAATGAGGCAGGATTTTTATATGTACGATAATCGGGGTAGTCGAAGGGGGAATAATCAAGTGAACCTTGAAACTTATATCCTTTCGAGATTGAGTCGTTTTTCAGAATCGAGAAACTTTAGTCTTCGTCTGTATAGATGTTCAACTGGACACTCTAATTGTGAGATCACACATTGGTTGGAGAAGGAAACGAAGCATTCCTTATATGGGTTTGGAAACCTCTCCTTAGTAGACGCGTTTTAAAATCTTGAGGGGAAGCCTAAAGAGGACAATATTTGCTAACGGTGGGCTTGGGATGTTACAAATGATATCAGAGCCAGGCACCAAACGGTATACCAACGAGGACGTTGGACCCCCAAGGGGGTGGATTGTGAGATCCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGAATGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCCTAAAGAGGACAATATCTGCTCGCGGTAGGCTTGGGATGTTACAAATGATATCAGAGCCAGACACCAAACAGTATGCCAGCGAAGACTTTGAGGGAGCCTAAAAGGGAAAGCTCAAAGAGGACAATATCCGCTAGCGGTGGACTTGGGGTGTTACAAATGGTATCAGAGCGAGGCACTGAACAGTGTGCCAGCGAAGACGTTGGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTATCCCTAGTAGACGCGTTTTAAAACTTTGAGGGAAAGCCTGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGAGCTTGGGCTGTTACACAATGGTTTACATTACTGATTTCGCTGCAGTTCCCTTTGTTCTTTCTTATTGATTTTCCAAGATATCTTATGAAGTCAAATTGAGTAAGTGACTATCATTTCTCTACTTTTTTTAAATAGGAAGAAGGGGTGGAAATAACAGCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGGTAACTTTCTCGCGTATTACATGTATAAGCCAAATCTGGTTTACTAGATGCAAGACGTAAGGTCTGCCTTTTTACTTAAACTAGCACGAGTCAGATGTTTTTTTTATTTTTACATTAATCAGATGCTTGTTTAGACTGTAGAATATAGGGCATTTTAATTTGCATTTCGACCGAGGTGGTAGCTTATGGTTTGTCCGAGTATGTTTCGTTCCAAAGAAGGGTGCTAGCACCTGGACTCTAATATCTACATATATGGGTAGGAGATTTGAAAATCTCTAATCTTTTGGTCGAAGACATGTCTTAACTAGTTTTTACCTTAACTAGTTGAACTATGTTTAAATTGACGTATACATATTTAGTTTGACAAAATGTGTTTTGAACAAAGCTCCGACTCCCGGGTATTAAGAACAAAAAGTTTTTTGAACAAATATAAACATCTACCAGATTGCTATCTATGCTTCATTACCTTTTCTTATTTCCTGCTTATTTCCTGCCCTTGGTTTTCTGTCATCTGTTGGTGTCTGAGTATATGAGTTGTTTTCTTTTAAACAGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGTATGTTATGAATTCATTTCCCCAAATTTTGTTCAAGACTGTTTATTTAGAGTTTCTCTCAGGTGGGTTTCTATGTGAATAAATTTTCATTGGATGTAGGGAGCGGCGACTCAGTGCTATGTAGCATTGAATCCCCAAGTCAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATAATTGTATCTCTTCTGAAAACCCTTCCTTACTCTTAGCTTCTCATCTCAGGCTCTTCATGTTAGAGATATATGGACAGTTTAATGGTGGAAGTAGATGAACCATTGTTTGTAGTTTTAAGTGCCACTTGAGAAACAGATACGAGTATAAGTTTGTAATGCTTTGTTTTGAAACAGATACCATAGTCATTCTTGTAGATTTCATATTGCTGTGTTTTAGAGTGTATTTGGAAAGGTGTTCATAATAAAGGCATATCCAACCAGCTCATGTAAAGCATTGCAAAGAAGTGTTAAATATAGTAATCAACTTTTTTGTGATTTCTACAAACTAATTCAAAATCAATAAAAGAAATAACTTTGAAAAGATCAAACACTAATCATTAACATATTCACACACTTTCTATCTATAGAGTAGTAATCTCTATTACAATTCAAATGAGGAGCCGAAACTCTGTGTTAATAGGACCCTGTTGAAGCTACACATTTCTATCAATCATTCTAATGATATCTGGCTTTGTTTTAGGTCATATTGTTGAAAAGAAAATGGCTTCTGGTTTGGCTCTTTCATGATTTGACCTCTATTTTACCTTCCAAACCCATCATTCCTCTAGCTGTTTGTCTAACATATCATGCAACACATTATGGGCAAGAGGAGATTCCAGAGGAAAAGCACCAGTTTGCTCAACTTCGCTGTGTCGTTGGGAAGAATGACCAGGCCCTAGTGGTCGTGCCTTCTGTCTCTATATCCTTTGCATTCGTCCACCGGTCTGAATTTACATATGGCTTAAGAGTATCACATCCATTGCCATGATCAAAATTGAATTCCTTCACAAACCCAATGGTAAGGGAGTGGTGTTGTTGATGCTGATGTGCTTGTTCACCGTTTGCTTTTGCATATTCTTCTGTACCATTTGAGGTATGACAGACAGCAGGAGAATTTTCTTTAGCCGTTTCAAATGGTTCATGTAATGGAGATGATGCAACTTCCAGTTCATTTGATTCCAGTGGCTTACTTCCTACGCTTCTTAATAAAGCATCTCCATCAGATAACTCAAATGAGAATCTATGATTAGCAGCAACAGGCTTCCTCCTTTCGGCTTCCATCAATGAGAATTCGAATACTTTGGGATTCATTTGTTGCGTGGTGATCTGACATAGATTCTGAAGTTTGGGGATTCAAAACAAAATCATTACTTGATTTGAATCCTATAGAATCTTGAGAGTAAGAATCAGTGCTTCGCCGTTGTTGCCAGCTATAAGTGGAACATTTGTCAAGGTCCAATAATGTAGGTGGAACTTCTAAATGGGAAATTCGAAAACTGAGAGCCAGAGGAAGCAAAATCACAATCAGGCAAAAGCGACTACGACCCAGAACGAGAAATGACTGACTGTGGTGGTATGCGGTGACTGATCGGGCTGCCAGGATAGGTAGTCATCATTAGGAAATGAACATTGATGATCAGGCTCAGGTTTCTGAAGGCTAGGTGGAAGAACCTAAGCAAAAGGAACTTCAAGGGAAGAAGGCCTAATCAAGTGGGTAGACAAAGGAGTGAAGGGAGCAGTTGATTCAAAGGTGGAGACACTAGCTATGTTTCATGAGCAAATGGGCCAATGGAAAAAATGGAGGAAGGCCCATCAGGAGAACACATGTTGCTGTAGGTGAATGAGTAGCAGAAGGTGGCTCAGATTGAAGGAAGGATACAGGGGAAGAGGGAGGGGTGCAGCAAGTGGAAGCTCAATGTCGGGTGAGTGCAATGAATCTTCTTCATGAGCCTCAGCTGAAGGAGGACTAGGTTCTGGTACCAACACACAGCGTGCACAACAACTCTTTTCCTCTGTTTGAGAGATCCAAAGCACCAATAAATACTCCAACAGCTACCCCATCTCCTTTTCTGAGGGCAAGCAAACAAAGAGAAAACGAGGAAAGTGATAATGACATCAGTACAGAACAGTGGAAAGAGCTTGGACAAATGAGAGCCCTATTTGTTGGAATCTTTATATAAAAACCAATACTCTTCCTCTATAGAGAATGACATTAATTTAAAGAATGGAGAGATGCCTTTCTGGTTAGAAAGAGCAGCGTTATTACAAGAAGACAAACAACATTGGGCTAGAACAGCGCATTGCTTCCTGACACAGTCGTCCAACCCAATGCACAAATCTTGGTACCTTCCAAACCCTAAGTATCTAATAATCATGCGAGGAGAAAGCCAAAAGCAGAAAAAGCAGAAAATCAGAAACGAAGCCAGCTCGTGATTCCGTGTATTCATGTAACGATTCGCAGTCCCTAAGCAAACAAACAGCA

mRNA sequence

AGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATCTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATTTGTATTTGTATCGATCTCAACCATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAAGAATCCCCTTCAGCCAAAATTGATGTCATGGAGTTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGAACAATGCGGGCGTTATGGCGACGCCTTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGAAGAAGGGGTGGAAATAACAGCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGGAGCGGCGACTCAGTGCTATGTAGCATTGAATCCCCAAGTCAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATAATTGTATCTCTTCTGAAAACCCTTCCTTACTCTTAGCTTCTCATCTCAGGCTCTTCATGTTAGAGATATATGGACAGTTTAATGGTGGAAGTAGATGAACCATTGTTTGTAGTTTTAAGTGCCACTTGAGAAACAGATACGAGTATAAGTTTGTAATGCTTTGTTTTGAAACAGATACCATAGTCATTCTTGTAGATTTCATATTGCTGTGTTTTAGAGTGTATTTGGAAAGGTGTTCATAATAAAGGCATATCCAACCAGCTCATGTAAAGCATTGCAAAGAAGTGTTAAATATAGTAATCAACTTTTTTGTGATTTCTACAAACTAATTCAAAATCAATAAAAGAAATAACTTTGAAAAGATCAAACACTAATCATTAACATATTCACACACTTTCTATCTATAGAGTAGTAATCTCTATTACAATTCAAATGAGGAGCCGAAACTCTGTGTTAATAGGACCCTGTTGAAGCTACACATTTCTATCAATCATTCTAATGATATCTGGCTTTGTTTTAGGTCATATTGTTGAAAAGAAAATGGCTTCTGGTTTGGCTCTTTCATGATTTGACCTCTATTTTACCTTCCAAACCCATCATTCCTCTAGCTGTTTGTCTAACATATCATGCAACACATTATGGGCAAGAGGAGATTCCAGAGGAAAAGCACCAGTTTGCTCAACTTCGCTGTGTCGTTGGGAAGAATGACCAGGCCCTAGTGGTCGTGCCTTCTGTCTCTATATCCTTTGCATTCGTCCACCGGTCTGAATTTACATATGGCTTAAGAGTATCACATCCATTGCCATGATCAAAATTGAATTCCTTCACAAACCCAATGGTAAGGGAGTGGTGTTGTTGATGCTGATGTGCTTGTTCACCGTTTGCTTTTGCATATTCTTCTGTACCATTTGAGGTATGACAGACAGCAGGAGAATTTTCTTTAGCCGTTTCAAATGGTTCATGTAATGGAGATGATGCAACTTCCAGTTCATTTGATTCCAGTGGCTTACTTCCTACGCTTCTTAATAAAGCATCTCCATCAGATAACTCAAATGAGAATCTATGATTAGCAGCAACAGGCTTCCTCCTTTCGGCTTCCATCAATGAGAATTCGAATACTTTGGGATTCATTTGTTGCGTGGTGATCTGACATAGATTCTGAAGTTTGGGGATTCAAAACAAAATCATTACTTGATTTGAATCCTATAGAATCTTGAGAGTAAGAATCAGTGCTTCGCCGTTGTTGCCAGCTATAAGTGGAACATTTGTCAAGGTCCAATAATGTAGGTGGAACTTCTAAATGGGAAATTCGAAAACTGAGAGCCAGAGGAAGCAAAATCACAATCAGGCAAAAGCGACTACGACCCAGAACGAGAAATGACTGACTGTGGTGGTATGCGGTGACTGATCGGGCTGCCAGGATAGGTAGTCATCATTAGGAAATGAACATTGATGATCAGGCTCAGGTTTCTGAAGGCTAGGTGGAAGAACCTAAGCAAAAGGAACTTCAAGGGAAGAAGGCCTAATCAAGTGGGTAGACAAAGGAGTGAAGGGAGCAGTTGATTCAAAGGTGGAGACACTAGCTATGTTTCATGAGCAAATGGGCCAATGGAAAAAATGGAGGAAGGCCCATCAGGAGAACACATGTTGCTGTAGGTGAATGAGTAGCAGAAGGTGGCTCAGATTGAAGGAAGGATACAGGGGAAGAGGGAGGGGTGCAGCAAGTGGAAGCTCAATGTCGGGTGAGTGCAATGAATCTTCTTCATGAGCCTCAGCTGAAGGAGGACTAGGTTCTGGTACCAACACACAGCGTGCACAACAACTCTTTTCCTCTGTTTGAGAGATCCAAAGCACCAATAAATACTCCAACAGCTACCCCATCTCCTTTTCTGAGGGCAAGCAAACAAAGAGAAAACGAGGAAAGTGATAATGACATCAGTACAGAACAGTGGAAAGAGCTTGGACAAATGAGAGCCCTATTTGTTGGAATCTTTATATAAAAACCAATACTCTTCCTCTATAGAGAATGACATTAATTTAAAGAATGGAGAGATGCCTTTCTGGTTAGAAAGAGCAGCGTTATTACAAGAAGACAAACAACATTGGGCTAGAACAGCGCATTGCTTCCTGACACAGTCGTCCAACCCAATGCACAAATCTTGGTACCTTCCAAACCCTAAGTATCTAATAATCATGCGAGGAGAAAGCCAAAAGCAGAAAAAGCAGAAAATCAGAAACGAAGCCAGCTCGTGATTCCGTGTATTCATGTAACGATTCGCAGTCCCTAAGCAAACAAACAGCA

Coding sequence (CDS)

AGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATCTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATTTGTATTTGTATCGATCTCAACCATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAAGAATCCCCTTCAGCCAAAATTGATGTCATGGAGTTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGAACAATGCGGGCGTTATGGCGACGCCTTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGAAGAAGGGGTGGAAATAACAGCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGGAGCGGCGACTCAGTGCTATGTAGCATTGAATCCCCAAGTCAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATAA

Protein sequence

RKIANDEPPKENSHLPQEDGKISAVSTSTQTTESGATLRRGPCRIHQSVFVSISTMWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTVSTSTQTTESGATLRRGPCRIHQFVFVSISTMWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDLTTPK

Homology

[Close]

BLAST of Cp4.1LG14g02170 vs. Swiss-Prot
Match: TIC32_ARATH (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.2e-117
Identity = 220/314 (70.06%), Postives = 258/314 (82.17%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVL+LRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN ++G KVKE ++K+ P AK+DVMELDLSSM+SVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVNLSSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKIND+S Y ++ AYGQSKL N+LHA EL ++LKE+GV ITAN+LHPGAI  TNL R
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAI-MTNLGR 240

Query: 362 FHGLINAVAT-SIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           +     AVA  ++A ++LK+V QGAAT CYVALNPQV GVSGEYF DSNIA P    KD 
Sbjct: 241 YFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDT 300

Query: 422 ELAKKLWDFSMDLT 435
           ELAKK+WDFS  LT
Sbjct: 301 ELAKKVWDFSTKLT 313

[Close]

BLAST of Cp4.1LG14g02170 vs. Swiss-Prot
Match: TIC32_PEA (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 3.9e-115
Identity = 215/317 (67.82%), Postives = 252/317 (79.50%), Query Frame = 1


Query: 122 MWIFGWT-GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMA 181
           MW F    G SGFS  STAE+VT GID  GLTAIVTGASSG+G ETTRVLALRG +VIM 
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 182 VRNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVM 241
           VRN+ A K VK+ +LK+ PSAK+D +ELDLSS++SV+KFAS++ +SGR LNIL+NNAG+M
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 242 ATPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGE 301
           A PF LS D IELQFATNHIGHFLLTNLLL+TMKKT  ESKKEGRIVN++SE HR  Y E
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 302 GVRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLL 361
           G+RFDKIND+S Y    AYGQSKL+N+LHA +L + LKE+GV ITAN+LHPG I  TNL 
Sbjct: 181 GIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTI-VTNLF 240

Query: 362 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           R +  +N +   I   VLKNVQQGAAT CYVAL+PQVKGVSGEYF DSN+   T H KD+
Sbjct: 241 RHNSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDV 300

Query: 422 ELAKKLWDFSMDLTTPK 438
           +LAKKLWDFS++L   K
Sbjct: 301 DLAKKLWDFSINLVKQK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. Swiss-Prot
Match: RDH11_MOUSE (Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-46
Identity = 113/291 (38.83%), Postives = 172/291 (59.11%), Query Frame = 1


Query: 143 TEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKESPSAK 202
           T  +   G  AIVTGA++G+G+ET + LA RG  V +A R+V+ G+     +   + +++
Sbjct: 31  TSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQ 90

Query: 203 IDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGH 262
           + V +LDL+  +S+R FA D++A  + L++L+NNAGVM  P+  + DG E+    NH+GH
Sbjct: 91  VFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGH 150

Query: 263 FLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQS 322
           FLLT+LLLE +K++        RIVNLSS GH L     + F  +  E  Y    AY  S
Sbjct: 151 FLLTHLLLEKLKESA-----PSRIVNLSSLGHHL---GRIHFHNLQGEKFYSAGLAYCHS 210

Query: 323 KLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFHGLINAVATSIATFVLKNVQ 382
           KL+NIL  KELA+RLK  GV  T  ++HPG +  + L R+  ++  +      F+ K  Q
Sbjct: 211 KLANILFTKELAKRLKGSGV--TTYSVHPGTV-HSELTRYSSIMRWLWQLFFVFI-KTPQ 270

Query: 383 QGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDL 434
           +GA T  Y AL   ++ +SG +F D  +A  +   ++  +A++LWD S DL
Sbjct: 271 EGAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDL 309

[Close]

BLAST of Cp4.1LG14g02170 vs. Swiss-Prot
Match: RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-45
Identity = 112/284 (39.44%), Postives = 170/284 (59.86%), Query Frame = 1


Query: 150 GLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKESPSAKIDVMELD 209
           G   +VTGA++G+G+ET + LA RG  V +A R+VE G+ V + +   + + ++ V +LD
Sbjct: 41  GKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLD 100

Query: 210 LSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGHFLLTNLL 269
           LS  +S+R FA  ++A  + L++L+NNAGVM  P+  + DG E+    NH+GHFLLT+LL
Sbjct: 101 LSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLL 160

Query: 270 LETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQSKLSNILH 329
           LE +K++        RIVN+SS  H L     + F  +  E  Y    AY  SKL+NIL 
Sbjct: 161 LEKLKESA-----PSRIVNVSSLAHHL---GRIHFHNLQGEKFYNAGLAYCHSKLANILF 220

Query: 330 AKELARRLKEEGVEITANALHPGAIAATNLLRFHGLINAVATSIATFVLKNVQQGAATQC 389
            +ELARRLK  GV  T  ++HPG +  + L+R H         + +F +K  QQGA T  
Sbjct: 221 TQELARRLKGSGV--TTYSVHPGTV-QSELVR-HSSFMRWMWWLFSFFIKTPQQGAQTSL 280

Query: 390 YVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDL 434
           + AL   ++ +SG +F D ++A  +  A++  +A++LWD S DL
Sbjct: 281 HCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDL 312

[Close]

BLAST of Cp4.1LG14g02170 vs. Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.5e-45
Identity = 117/298 (39.26%), Postives = 164/298 (55.03%), Query Frame = 1


Query: 149 NGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKESPSA------- 208
           +G T ++TGA+SGLG  T   L   G  VIM  R+    ++    + +E   A       
Sbjct: 42  HGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEP 101

Query: 209 ------KIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQF 268
                 ++ V ELDL+S+ SVR F  + +     L++L+NNAG+   P+M + DG E+QF
Sbjct: 102 GVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQF 161

Query: 269 ATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRT 328
             NH+GHFLLTNLLL  +K     S    RIV +SS+ ++  YG+ + FD +N E  Y  
Sbjct: 162 GVNHLGHFLLTNLLLGLLK-----SSAPSRIVVVSSKLYK--YGD-INFDDLNSEQSYNK 221

Query: 329 IFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNL---LRFHGLINAVATS 388
            F Y +SKL+NIL  +ELARRL  EG  +T N LHPG I  TNL   +    L+  +   
Sbjct: 222 SFCYSRSKLANILFTRELARRL--EGTNVTVNVLHPG-IVRTNLGRHIHIPLLVKPLFNL 281

Query: 389 IATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFS 431
           ++    K   +GA T  Y+A +P+V+GVSG YF D         A D  +A+KLWD S
Sbjct: 282 VSWAFFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDIS 328

[Close]

BLAST of Cp4.1LG14g02170 vs. TrEMBL
Match: A0A0A0KUV5_CUCSA (Short-chain dehydrogenase OS=Cucumis sativus GN=Csa_4G047990 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 2.9e-157
Identity = 288/316 (91.14%), Postives = 303/316 (95.89%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN+EAG+KVKEAVLKESPSAKIDVMELDLSSMESVRKFA+DYIASG  LNILMNNAGVMA
Sbjct: 61  RNIEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGLPLNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+TYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRITYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RF+KIN+ESEYRTI AYGQSKLSNILHAKELARRLK EGVEITANALHPG+I ATNLLR
Sbjct: 181 IRFNKINNESEYRTILAYGQSKLSNILHAKELARRLKVEGVEITANALHPGSI-ATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FH  INAV   +A +VLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM+
Sbjct: 241 FHSTINAVTNLVAKYVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMD 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS+DLT PK
Sbjct: 301 LAKKLWDFSVDLTNPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. TrEMBL
Match: M5WB87_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008889mg PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.9e-133
Identity = 248/316 (78.48%), Postives = 277/316 (87.66%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW G SGFSARSTAEEVT+GIDG GLTAIVTGASSGLG ETTRVLALR V+VIMAV
Sbjct: 1   MWIFGWKGQSGFSARSTAEEVTQGIDGTGLTAIVTGASSGLGLETTRVLALRRVHVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN EAG+ V+ A+LKE P+A I+VMELDLSSM SVRKFAS+Y +SG  LNIL+NNAGVMA
Sbjct: 61  RNTEAGRDVRTAILKEIPTANINVMELDLSSMASVRKFASEYNSSGLPLNILINNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLS D IELQFATNH+GHFLLTNLLLETMKKT  ESKKEGRIVNLSSE HR  Y EG
Sbjct: 121 TPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTTRESKKEGRIVNLSSEAHRFAYSEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDES Y +I+AYGQSKL+NILHA EL +RLKEEGV ITAN+LHPG+I ATNLLR
Sbjct: 181 IRFDKINDESGYSSIYAYGQSKLANILHANELTKRLKEEGVAITANSLHPGSI-ATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           +H  IN +A+++   +LKNVQQGAAT+CYVAL+PQVKGVSGEYF+DSN ANPT+ AKD E
Sbjct: 241 YHSYINVIASTLGRLMLKNVQQGAATECYVALHPQVKGVSGEYFMDSNKANPTSQAKDPE 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS+ LT PK
Sbjct: 301 LAKKLWDFSLSLTDPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. TrEMBL
Match: A0A0D2MPJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G157700 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 2.4e-132
Identity = 243/316 (76.90%), Postives = 274/316 (86.71%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSA STAEEVT+GIDG+ LTAIVTGASSG+G ETTRVLALRGV+V+MAV
Sbjct: 1   MWIFGWKGPSGFSASSTAEEVTQGIDGSALTAIVTGASSGIGVETTRVLALRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN +AG+ VKE++LKE PSAKIDVM+LDLSSM SVRKFAS Y +S   LN+L+NNAGVMA
Sbjct: 61  RNADAGQNVKESILKEIPSAKIDVMDLDLSSMASVRKFASQYQSSNLPLNLLINNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           +PFMLS D IELQFATNH+GHFLLT+LLLETMK+T  ES  EGRIVN+SSEGHR+ Y EG
Sbjct: 121 SPFMLSQDKIELQFATNHLGHFLLTDLLLETMKRTARESDIEGRIVNVSSEGHRIAYSEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDES Y T +AYGQSKL+NILHAKELARRLKEEGVEITAN+LHPGAI +TNL+R
Sbjct: 181 IRFDKINDESGYYTWYAYGQSKLANILHAKELARRLKEEGVEITANSLHPGAIISTNLMR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
            HGLIN V   +  + LKN+ QGAAT CYVALNPQVKGVSGEYF+DSNI NP+  AKD +
Sbjct: 241 HHGLINTVGQMLGKYFLKNIPQGAATTCYVALNPQVKGVSGEYFLDSNIGNPSAKAKDAD 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS  LT PK
Sbjct: 301 LAKKLWDFSCTLTNPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. TrEMBL
Match: A0A0B0PI19_GOSAR (Short-chain dehydrogenase TIC 32, chloroplastic-like protein OS=Gossypium arboreum GN=F383_28545 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.1e-131
Identity = 242/316 (76.58%), Postives = 272/316 (86.08%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSA STAEEVT+GIDG+ L AIVTGASSG+G ETTRVLALRGV+V+MAV
Sbjct: 1   MWIFGWKGPSGFSASSTAEEVTQGIDGSALAAIVTGASSGIGVETTRVLALRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN +AG+ VKE++LKE PSAKIDVMELDLSSM SVRKFAS Y +S   LN+L+NNAGVMA
Sbjct: 61  RNADAGRNVKESILKEIPSAKIDVMELDLSSMASVRKFASQYQSSNLPLNLLINNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLS D IELQFATNH+GHFLLT+LLLETMK+T  ES  EGRIVN+SSEGHR+ Y EG
Sbjct: 121 TPFMLSQDKIELQFATNHLGHFLLTDLLLETMKRTARESNIEGRIVNVSSEGHRIAYSEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDES Y T +AYGQSKL+NILHAKELA+RLKEE VEITAN+LHPGAI +TNL+R
Sbjct: 181 IRFDKINDESGYYTWYAYGQSKLANILHAKELAQRLKEEEVEITANSLHPGAIISTNLMR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
            HGLIN V   +  + LKN+ QGAAT CYVALNPQVKGVSGEYF+DSNI NP+  AKD +
Sbjct: 241 HHGLINTVGQMLGRYFLKNIPQGAATTCYVALNPQVKGVSGEYFLDSNIGNPSAKAKDAD 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS  LT PK
Sbjct: 301 LAKKLWDFSCTLTNPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. TrEMBL
Match: Q0VH86_GOSHI (3-ketoacyl-CoA reductase 3 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 3.5e-131
Identity = 242/316 (76.58%), Postives = 272/316 (86.08%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSA STAEEVT+GIDG+ L AIVTGASSG+G ETTRVLALRGV+V+MAV
Sbjct: 13  MWIFGWKGPSGFSASSTAEEVTQGIDGSALAAIVTGASSGIGVETTRVLALRGVHVVMAV 72

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN +AG+ VKE++LKE PSAKIDVMELDLSSM SVRKFAS Y +S   LN+L+NNAGVMA
Sbjct: 73  RNADAGRNVKESILKEIPSAKIDVMELDLSSMASVRKFASQYQSSNLPLNLLINNAGVMA 132

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLS D IELQFATNH+GHFLLT+LLLETMK+T  ES  EGRIVN+SSEGHR+ Y EG
Sbjct: 133 TPFMLSQDKIELQFATNHLGHFLLTDLLLETMKRTARESNIEGRIVNVSSEGHRIAYREG 192

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDES Y T +AYGQSKL+NILHAKELA+RLKEE VEITAN+LHPGAI +TNL+R
Sbjct: 193 IRFDKINDESGYYTWYAYGQSKLANILHAKELAQRLKEEEVEITANSLHPGAIISTNLMR 252

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
            HGLIN V   +  + LKN+ QGAAT CYVALNPQVKGVSGEYF+DSNI NP+  AKD +
Sbjct: 253 HHGLINTVGQMLGKYFLKNIPQGAATTCYVALNPQVKGVSGEYFLDSNIGNPSAKAKDAD 312

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS  LT PK
Sbjct: 313 LAKKLWDFSCTLTNPK 328

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR10
Match: AT4G11410.1 (AT4G11410.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-120
Identity = 216/313 (69.01%), Postives = 257/313 (82.11%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW F W G SGFSARSTAEEVT GIDG GLTAIVTGASSG+GEETTRVLALRGV+V+MAV
Sbjct: 1   MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN ++G +V++ +LKE P AKIDVM+LDLSSM SVR FAS+Y +    LN+L+NNAG+MA
Sbjct: 61  RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PF+LS D IELQFATNH+GHFLLTNLLLE MKKT  ES +EGRIV +SSEGHR  Y EG
Sbjct: 121 CPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           V+FDKINDE+ Y T+ AYGQSKL NILHA ELAR  KE+GV ITAN+LHPG+I  TNLLR
Sbjct: 181 VQFDKINDEARYNTLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSI-MTNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           +H  IN +  ++  +VLK++ QGAAT CY AL+PQ KGVSGEY +D+NI++P +  KD +
Sbjct: 241 YHSFINTIGNAVGKYVLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDKD 300

Query: 422 LAKKLWDFSMDLT 435
           LAKKLW+FS+ LT
Sbjct: 301 LAKKLWEFSLRLT 312

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR10
Match: AT4G23430.2 (AT4G23430.2 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 422.9 bits (1086), Expect = 2.3e-118
Identity = 220/314 (70.06%), Postives = 258/314 (82.17%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVL+LRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN ++G KVKE ++K+ P AK+DVMELDLSSM+SVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVNLSSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKIND+S Y ++ AYGQSKL N+LHA EL ++LKE+GV ITAN+LHPGAI  TNL R
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAI-MTNLGR 240

Query: 362 FHGLINAVAT-SIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           +     AVA  ++A ++LK+V QGAAT CYVALNPQV GVSGEYF DSNIA P    KD 
Sbjct: 241 YFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDT 300

Query: 422 ELAKKLWDFSMDLT 435
           ELAKK+WDFS  LT
Sbjct: 301 ELAKKVWDFSTKLT 313

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR10
Match: AT4G23420.3 (AT4G23420.3 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 411.8 bits (1057), Expect = 5.4e-115
Identity = 212/304 (69.74%), Postives = 248/304 (81.58%), Query Frame = 1


Query: 131 SGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKV 190
           SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVLALRGV+V+MAVRN  AG KV
Sbjct: 27  SGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLALRGVHVVMAVRNTGAGAKV 86

Query: 191 KEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDG 250
           KE ++K+ P AK+DVMEL+LSSMESVRKFAS+Y ++G  LN+L+NNAG+MA PFMLS D 
Sbjct: 87  KEDIVKQVPGAKVDVMELELSSMESVRKFASEYKSAGLPLNLLINNAGIMACPFMLSKDN 146

Query: 251 IELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDE 310
           IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVN+SSE HR +Y EGVRFDKINDE
Sbjct: 147 IELQFATNHLGHFLLTKLLLDTMKNTSRESKREGRIVNVSSEAHRYSYPEGVRFDKINDE 206

Query: 311 SEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFHGLINAVA 370
           S Y +I AYGQSKL N+LHA ELA++LKE+GV ITAN+LHPGAI       F+  +    
Sbjct: 207 SSYSSIRAYGQSKLCNVLHANELAKQLKEDGVNITANSLHPGAIMTNLWGYFNSYLAGAV 266

Query: 371 TSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFS 430
            ++A +++K+V QGAAT CYVALNPQV GV+GEYF DSNIA P    KD ELAKKLWDFS
Sbjct: 267 GAVAKYMVKSVPQGAATTCYVALNPQVAGVTGEYFSDSNIAKPIELVKDTELAKKLWDFS 326

Query: 431 MDLT 435
             LT
Sbjct: 327 TKLT 330

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR10
Match: AT5G02540.1 (AT5G02540.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 330.1 bits (845), Expect = 2.1e-90
Identity = 170/310 (54.84%), Postives = 224/310 (72.26%), Query Frame = 1


Query: 124 IFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRN 183
           I G  GPSGF + STAEEVT+GID   LTAI+TG + G+G ET RVL+ RG +V++  RN
Sbjct: 7   ITGRRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARN 66

Query: 184 VEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATP 243
           + A +  K  +L+++ +A++ +++LDLSS++S++ F  ++ A    LN+L+NNAGVM  P
Sbjct: 67  MGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCP 126

Query: 244 FMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVR 303
           + LS DGIELQFATNHIGHFLLTNLLL+TMK T   S  EGRI+N+SS  H  TY EG++
Sbjct: 127 YQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQ 186

Query: 304 FDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFH 363
           FD IND   Y    AYGQSKL+NILHA EL+R+L+EEGV ITAN++HPG I  TNL +  
Sbjct: 187 FDSINDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLI-LTNLFQHT 246

Query: 364 GLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELA 423
            L+       + ++ KN+ QGAAT CYVAL+P VKGV+G+YF D N   P+  A+D  LA
Sbjct: 247 ALLMRFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDETLA 306

Query: 424 KKLWDFSMDL 434
           +KLWDFS+ L
Sbjct: 307 QKLWDFSVKL 315

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR10
Match: AT2G37540.1 (AT2G37540.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 325.5 bits (833), Expect = 5.1e-89
Identity = 169/308 (54.87%), Postives = 221/308 (71.75%), Query Frame = 1


Query: 126 GWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVE 185
           G  G SGF + STAE+VT+ ID + LTAI+TG +SG+G E  RVLA+RG +VI+A RN +
Sbjct: 9   GKKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPK 68

Query: 186 AGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFM 245
           A  + KE +L+ +P+A++D +++D+SS++SVR F   ++A    LNIL+NNAGVM  PF 
Sbjct: 69  AANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFK 128

Query: 246 LSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFD 305
           L+ DGIE QFATNHIGHFLLTNLLL+ MK T  ES  +GRIVNLSS  H  TY EG++F 
Sbjct: 129 LTEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGIKFQ 188

Query: 306 KINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFHGL 365
            IND + Y    AYGQSKLSN+LH+  L+RRL+EEGV IT N++HPG +  TNL R+ G 
Sbjct: 189 GINDPAGYSERRAYGQSKLSNLLHSNALSRRLQEEGVNITINSVHPG-LVTTNLFRYSGF 248

Query: 366 INAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKK 425
              V  ++     KN+ QGAAT CYVAL+P ++GV+G+YF D NI  P+  A +  LA K
Sbjct: 249 SMKVFRAMTFLFWKNIPQGAATTCYVALHPDLEGVTGKYFGDCNIVAPSKFATNNSLADK 308

Query: 426 LWDFSMDL 434
           LWDFS+ L
Sbjct: 309 LWDFSVFL 315

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: gi|659102252|ref|XP_008452031.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis melo])

HSP 1 Score: 565.5 bits (1456), Expect = 8.3e-158
Identity = 290/316 (91.77%), Postives = 302/316 (95.57%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAG+KVKEAVLKESPSAKIDVMELDLSSMESVRKFA+DYIASGR LNILMNNAGVMA
Sbjct: 61  RNVEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGRPLNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPF LSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+ YGEG
Sbjct: 121 TPFTLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRMAYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKIN+E+EYRTI AYGQSKLSNILHAKELARRLKEEGVEITANALHPGAI ATNLLR
Sbjct: 181 IRFDKINNEAEYRTILAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAI-ATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FH  INAV   +A FVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPT HAKDM+
Sbjct: 241 FHSTINAVTNLVAKFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTKHAKDMD 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS+DLT PK
Sbjct: 301 LAKKLWDFSVDLTNPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: gi|449457572|ref|XP_004146522.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis sativus])

HSP 1 Score: 563.1 bits (1450), Expect = 4.1e-157
Identity = 288/316 (91.14%), Postives = 303/316 (95.89%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN+EAG+KVKEAVLKESPSAKIDVMELDLSSMESVRKFA+DYIASG  LNILMNNAGVMA
Sbjct: 61  RNIEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGLPLNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+TYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRITYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RF+KIN+ESEYRTI AYGQSKLSNILHAKELARRLK EGVEITANALHPG+I ATNLLR
Sbjct: 181 IRFNKINNESEYRTILAYGQSKLSNILHAKELARRLKVEGVEITANALHPGSI-ATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FH  INAV   +A +VLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM+
Sbjct: 241 FHSTINAVTNLVAKYVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMD 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS+DLT PK
Sbjct: 301 LAKKLWDFSVDLTNPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: gi|1009156147|ref|XP_015896091.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 486.9 bits (1252), Expect = 3.7e-134
Identity = 254/316 (80.38%), Postives = 275/316 (87.03%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFG  GPSGFSA STAEEVT GIDG GLTAIVTGASSGLG ETTRVLALRGV+VIMAV
Sbjct: 1   MWIFGRKGPSGFSACSTAEEVTHGIDGAGLTAIVTGASSGLGVETTRVLALRGVHVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNV +GK V+E VLKE P+AKIDVMELDLSSM SVRKFAS+Y ASG  LN+L+NNAGVMA
Sbjct: 61  RNVNSGKDVRETVLKEIPTAKIDVMELDLSSMASVRKFASEYSASGLPLNLLINNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLS D IELQFATNHIGHFLLTNLLLETMK T  ES KEGRIV++SSEGHR  Y EG
Sbjct: 121 TPFMLSQDNIELQFATNHIGHFLLTNLLLETMKNTARESNKEGRIVHVSSEGHRFAYREG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDES Y +I+AYGQSKL+NILHAKEL+R LK EGV+ITANALHPGAI  TNLLR
Sbjct: 181 IRFDKINDESSYNSIYAYGQSKLANILHAKELSRILKAEGVDITANALHPGAI-VTNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
            HG  N +A     FVLKNVQQGAATQCYVALNPQVKGVSGEYF+DSN ANP+N AKD E
Sbjct: 241 HHGFFNVIANMFGKFVLKNVQQGAATQCYVALNPQVKGVSGEYFMDSNKANPSNLAKDAE 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS++LT+PK
Sbjct: 301 LAKKLWDFSLNLTSPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: gi|595847686|ref|XP_007209377.1| (hypothetical protein PRUPE_ppa008889mg [Prunus persica])

HSP 1 Score: 483.4 bits (1243), Expect = 4.1e-133
Identity = 248/316 (78.48%), Postives = 277/316 (87.66%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW G SGFSARSTAEEVT+GIDG GLTAIVTGASSGLG ETTRVLALR V+VIMAV
Sbjct: 1   MWIFGWKGQSGFSARSTAEEVTQGIDGTGLTAIVTGASSGLGLETTRVLALRRVHVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN EAG+ V+ A+LKE P+A I+VMELDLSSM SVRKFAS+Y +SG  LNIL+NNAGVMA
Sbjct: 61  RNTEAGRDVRTAILKEIPTANINVMELDLSSMASVRKFASEYNSSGLPLNILINNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLS D IELQFATNH+GHFLLTNLLLETMKKT  ESKKEGRIVNLSSE HR  Y EG
Sbjct: 121 TPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTTRESKKEGRIVNLSSEAHRFAYSEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDES Y +I+AYGQSKL+NILHA EL +RLKEEGV ITAN+LHPG+I ATNLLR
Sbjct: 181 IRFDKINDESGYSSIYAYGQSKLANILHANELTKRLKEEGVAITANSLHPGSI-ATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           +H  IN +A+++   +LKNVQQGAAT+CYVAL+PQVKGVSGEYF+DSN ANPT+ AKD E
Sbjct: 241 YHSYINVIASTLGRLMLKNVQQGAATECYVALHPQVKGVSGEYFMDSNKANPTSQAKDPE 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS+ LT PK
Sbjct: 301 LAKKLWDFSLSLTDPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: gi|823143979|ref|XP_012471805.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Gossypium raimondii])

HSP 1 Score: 480.3 bits (1235), Expect = 3.5e-132
Identity = 243/316 (76.90%), Postives = 274/316 (86.71%), Query Frame = 1


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSA STAEEVT+GIDG+ LTAIVTGASSG+G ETTRVLALRGV+V+MAV
Sbjct: 1   MWIFGWKGPSGFSASSTAEEVTQGIDGSALTAIVTGASSGIGVETTRVLALRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN +AG+ VKE++LKE PSAKIDVM+LDLSSM SVRKFAS Y +S   LN+L+NNAGVMA
Sbjct: 61  RNADAGQNVKESILKEIPSAKIDVMDLDLSSMASVRKFASQYQSSNLPLNLLINNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           +PFMLS D IELQFATNH+GHFLLT+LLLETMK+T  ES  EGRIVN+SSEGHR+ Y EG
Sbjct: 121 SPFMLSQDKIELQFATNHLGHFLLTDLLLETMKRTARESDIEGRIVNVSSEGHRIAYSEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDES Y T +AYGQSKL+NILHAKELARRLKEEGVEITAN+LHPGAI +TNL+R
Sbjct: 181 IRFDKINDESGYYTWYAYGQSKLANILHAKELARRLKEEGVEITANSLHPGAIISTNLMR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
            HGLIN V   +  + LKN+ QGAAT CYVALNPQVKGVSGEYF+DSNI NP+  AKD +
Sbjct: 241 HHGLINTVGQMLGKYFLKNIPQGAATTCYVALNPQVKGVSGEYFLDSNIGNPSAKAKDAD 300

Query: 422 LAKKLWDFSMDLTTPK 438
           LAKKLWDFS  LT PK
Sbjct: 301 LAKKLWDFSCTLTNPK 316

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g02170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIC32_ARATH	4.2e-117	70.06	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32...	[more]
TIC32_PEA	3.9e-115	67.82	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 S...	[more]
RDH11_MOUSE	1.7e-46	38.83	Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2	[more]
RDH11_HUMAN	1.5e-45	39.44	Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2	[more]
RDH14_HUMAN	9.5e-45	39.26	Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1	[more]

BLAST of Cp4.1LG14g02170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUV5_CUCSA	2.9e-157	91.14	Short-chain dehydrogenase OS=Cucumis sativus GN=Csa_4G047990 PE=4 SV=1	[more]
M5WB87_PRUPE	2.9e-133	78.48	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008889mg PE=4 SV=1	[more]
A0A0D2MPJ0_GOSRA	2.4e-132	76.90	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G157700 PE=3 SV=1	[more]
A0A0B0PI19_GOSAR	2.1e-131	76.58	Short-chain dehydrogenase TIC 32, chloroplastic-like protein OS=Gossypium arbore...	[more]
Q0VH86_GOSHI	3.5e-131	76.58	3-ketoacyl-CoA reductase 3 OS=Gossypium hirsutum PE=2 SV=1	[more]

BLAST of Cp4.1LG14g02170 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11410.1	1.1e-120	69.01	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.2	2.3e-118	70.06	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23420.3	5.4e-115	69.74	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G02540.1	2.1e-90	54.84	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G37540.1	5.1e-89	54.87	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Cp4.1LG14g02170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102252\|ref\|XP_008452031.1\|	8.3e-158	91.77	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis melo]	[more]
gi\|449457572\|ref\|XP_004146522.1\|	4.1e-157	91.14	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis sativus]	[more]
gi\|1009156147\|ref\|XP_015896091.1\|	3.7e-134	80.38	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Ziziphus jujuba]	[more]
gi\|595847686\|ref\|XP_007209377.1\|	4.1e-133	78.48	hypothetical protein PRUPE_ppa008889mg [Prunus persica]	[more]
gi\|823143979\|ref\|XP_012471805.1\|	3.5e-132	76.90	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Gossypium raimo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR002347	SDR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019685	photosynthesis, dark reaction
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016630	protochlorophyllide reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g02170.1	Cp4.1LG14g02170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 278..294 score: 1.5E-15coord: 152..169 score: 1.5E-15coord: 319..338 score: 1.5E-15coord: 342..359 score: 1.5E-15coord: 228..239 score: 1.5
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 152..293 score: 2.2
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 149..407 score: 1.6
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 150..411 score: 2.53
None	No IPR available	PANTHER	PTHR24320	FAMILY NOT NAMED	coord: 99..435 score: 1.6E
None	No IPR available	PANTHER	PTHR24320:SF71	SUBFAMILY NOT NAMED	coord: 99..435 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g02170	Cucsa.106800	Cucumber (Gy14) v1	cgycpeB0237
Cp4.1LG14g02170	CmaCh16G005940	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g02170	CmoCh16G006440	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g02170	CmoCh04G007830	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g02170	Cla004954	Watermelon (97103) v1	cpewmB231
Cp4.1LG14g02170	Cla014631	Watermelon (97103) v1	cpewmB218
Cp4.1LG14g02170	Csa4G047990	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g02170	MELO3C016354	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g02170	ClCG07G008100	Watermelon (Charleston Gray)	cpewcgB210
Cp4.1LG14g02170	ClCG01G001080	Watermelon (Charleston Gray)	cpewcgB203
Cp4.1LG14g02170	CSPI04G05780	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g02170	MELO3C016354.2	Melon (DHL92) v3.6.1	cpemedB238
Cp4.1LG14g02170	MELO3C005826.2	Melon (DHL92) v3.6.1	cpemedB218
Cp4.1LG14g02170	CsaV3_4G005940	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g02170	Bhi01G001807	Wax gourd	cpewgoB0289
Cp4.1LG14g02170	CsGy4G005650	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g02170	Carg22201	Silver-seed gourd	carcpeB0838

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g02170	Cucumber (Gy14) v2	cgybcpeB324
Cp4.1LG14g02170	Cucumber (Gy14) v2	cgybcpeB619
Cp4.1LG14g02170	Melon (DHL92) v3.6.1	cpemedB217
Cp4.1LG14g02170	Melon (DHL92) v3.6.1	cpemedB230
Cp4.1LG14g02170	Silver-seed gourd	carcpeB1301
Cp4.1LG14g02170	Cucumber (Chinese Long) v3	cpecucB0254
Cp4.1LG14g02170	Cucumber (Chinese Long) v3	cpecucB0277
Cp4.1LG14g02170	Cucurbita pepo (Zucchini)	cpecpeB196
Cp4.1LG14g02170	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG14g02170	Cucurbita maxima (Rimu)	cmacpeB714
Cp4.1LG14g02170	Bottle gourd (USVL1VR-Ls)	cpelsiB187