Carg22201 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22201
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	short-chain dehydrogenase TIC 32, chloroplastic-like
Location	Cucurbita_argyrosperma_scaffold_174 : 32096 .. 37125 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAATAGCCATCTACCGCAAGAAGATGGCAAAATTGTAATTTCATAGTCGGGTTTATTCCAAAAGAAAACAGAACTTTTTGAGTGCAGTTTCTACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTCCCGGATTCACCAATTTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGTTTCGTTTCATCCCTTTCCCCTTTTTCTCCTTCTTCCCCTCTGTTTTAATCCCTTCTTTGATCTGGGTTTTGTTGTTTACAAAATCGATGGTGATTCAGTCTATTTATAGGAACCTGGATACCTTGTCTTTTGATTGGATTAAGGTTGTTTTGTTATTGACTCACTACTTGATTGCTATTTGTCTTGCAAATCTTTCTTGGTTATACTATGAATTCTGTGTTCTCTGAGCCCGTTCTGTAGCTGTTCTTGGACCGTTCAGTCTCAATCAAAGTGTATATTTTGTATCCTTTATATGTAGAATGCAGAAATCTGTGGAGTAATGGGGTTTTCTTTGAGGATTTATGTATAGATTGAGCTTATTTGTTAGGTTTCTATACTTAGCATAATGTTTGTATGCTTAGAAACTGAAGTAGAAATGGAACTAGAATGTCCATTTGCAAGAATGTGCAAGTATATCAACCAAAGCATTACCGAGTTTGGATGGACTTCTATAAAAGTTTCTAGACATGGAGTTTGAAGCACGTTTGCTTTCAAAAGTTTCATTAATACTCGTAAGCTGCTAAGAAATATCTATGGAAAAAATTTATTTCGCTCGTTTTTTACCGTATCTTTTTCAGTATCCTCTTACTCCCCTTCTTTCATTCTTCGATATCGAAAGCTGCCCCTTCATTCAAGGTTATAGACTATAACAAGAAGAAGAAAAAAAAAATGGAATCACCAAGGGACCTTAGGACATAAATGTTTAACATGGTTATACGTTAGTAGTTGAGTGAGAGTTGATACGTTTACGACATAATTTTGAGGACAACTAGTGGGAGGAAAAAAGAAAGAAAACGTGTGCAATACCAAATTTGTAGAGATGAAGATTTTGTTCAACTTTTCTTTGTAGTTCAAATTAGTCTATTTGTTGTCGTTGATTCAGAAGGTTTCTCAATAATTTAAGATGATATTTCTTTGTCAGCCTTTTTTGTATTTGACAATTCATCGTTTTGTTGTGTTTTGAGGGGAGATTTTGATTTTGGGACTTGGTGGGGTTTTGTATAAGAAATTGTTAGGTTATAGATTGAAGCAAAGGAGAGAGGAAACGAAGGAGGGAGGTGATGGGTAAATGGTTTTCATCCATATACTAATCGTAAATGTATTTTGAGCTGTTTTTTTCGGAAAGGTTAAGGGTAATCAAACTCTTTTCAAGCTGATTTGAGAAGGAAACTGTAACGGCCCAAACCCACTGCTAACAGATATTGTTTCCCCTCAAGGCTTTAAAACTCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACTAATGTGGGATATCACAATCCACCCCCTTCAGGGCCCAGCTTCCTCGCTGGCACTCGTTCCTTTCTCCACCCCCTTTAGGGCCAGTGTCCTTACTGGCACACCGCCTCGTGTCTACTCCCCTTCGGGGAACAGCCTCCTCATTGGCACATCGCTCGGTGCCTGACTCTGATACCATTTGTAACGGCCCAAACCCACCGCTAGCAGATATTATCCTCTTTGGCCTTTCCCTTTCGGGCTTTCCCTTAAGGCTTTAAACGCGTTTGCTAGGGAAAGGTTTCCACACCCTTGTAAAGGATGTTTTGTTCTCCTCCCCAACCAATATGGGATACCATAGAAACAGTCCAATGAATTTCTAGATTTAGTTCTCAGATGTTCGATTTTTCTATATACTTTTCTTTTATCATTCACTTCAAATGTTTCATTTTGATCTATAGAAGATCTTAATCTAAAGAACAGTTGAAGTTTTCCAACTTCGAAACATGTAGTTCAATTCCCTTTCCTTCCTCGTGATTTCAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAACAATCCCCCTCTGCCAAAATTGATGTCATGGAATTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGTAAGAACTGAATTAAAGCTGGTAGACTAAAATTCTTCGCCTGGGAAATCTGCTTATTTGATAATAATACAACTCTATATCTTCTTTGATTGAAGGAACAATGCGGGCGTTATGGCGACTCCGTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGTATGTTTCAAATAAAAGATTTGTAATGGGTGCAGTTCTTATTATTATTATTCTTTTGTAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTAATGATCTACGTTGCTTATTTGATGATTACTTCCTCAAAAGCTTCCTTGAATGTTATGTAGTGATTCATTGTATGATGTGAAATTTTAGGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGTGCTTATTGGTTTAGTTATTGAATGTATAACCAGAGCTTTAAAATTTGAACCTTAAATGAGGCAGGATATTTATATGTTCGATAATCGGGGTAGTCGAAGGGGATCAAGTGAACCTTGAAACTTATATCCTTTCGAGATTTAGTCGTTTCAATGCTTTCATAATCCAGAAACTTTAGTCTTTGTCAGTATAGATGTTCAACTGGACACTCTAATTGTGAGATCACACATTGGTTGGAGAAGGAAACGAATCATTCCTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTGAGGGAAAGCTTAAAGAGGACAATATCTGCTAGCGATGGGCTTGGGTTGTTACAAATGATATTAGAGCCAGACACCAAACGGTATGCCAGCAAGGACGCTGGAACCCCAAGGGGATGGATTGTGAGATTCCCACATTGGTTGGAGAGGGAAGCGAAGCATTTCTTATAAGAATGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTGAGGGAGCCTAAAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGGTGTTACAAATGGTATCAGAGCCAGGCACTGAACAGTATGCCAGCGAGGACGTTGGGTCTCCAAGGGGGTAGATTGTGAGATCCCACATTGGTTGGATAGGGGAACTAAGCATTCCTTATAAGGGTGTGGAAACCTATCCCTAGTAGACGCGTTTCAAAACTTTGAGAGGAAGCCTGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACACCAATGGTTGATTTTGCTGCAGTTCCCTTTGTTCTTTCTTATTGGTTTTCCAAGATATCTTATGAAGTCAAATAGAGTAAGTGACTATCATTTCTCTACTTTTTTCCAATAGGAAGAAGGGGTGGAAATAACAGCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGGTAACTTTCTTGCGCATTACATGTATAAGCCAAATGTGCTTTACTAGATACAAGACTTAAGGTCTGCCTTTTTAGTTAAACTAGCACGAGTCAGATGTTTTTTTCTTTTTACATTAATCAGATGCTTGTTTAGACCGTAGAATATAGGGCATTTTAATTTGCATTTCGACCAAGGTGGTAGCTTATGGTTTGTCCGAGTATGTTTCGTTCCAAGGAAGGGTGCTAGCACCTGGACTCTAATATCTACATATATGGGTAGGAGATTTGAGAATCTCTAATCTTTTGGTCGAAGACATGTCTTAACTAGTTGAACTACGTTTAAATTGGTGTATACATATTTAGTTTGACAAAATGTGTTTTGAACAAAGCTCCGACTCCCAGGTATTAAGAACAAAAAGTTTTTTGAACAAATATAAACATCTACCAGATTGCTATCTATGCTTCATTACCTTTTCTTATTTCCTGCTTATTTCCTGCCCTTGGTTTTCTGTCATCTGTTGGTGTCTGAGTATATGAGTTGTTTTCTTTTAAACAGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGTATGTTATGAATTCATTTCCCCAAATTTTGTTCAAGACTGTTTATTTGGAGTTCTCTCAGGTGGGTTTCTATGTGAATAAATTTTCATTGGATGTAGGGAGCGGCGACTCAGTGCTATGTGGCATTGAATCCCCAAGTGAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATGATTGTATCACTTATGAAAACCCTTCCTTACTCTTAGCTTCTCATCTCAGGCTTCATGTTAGAGATATATGGACAGTTTAATGGTGGAAGTAGATGAACCATTGTTTGTAGTTTTAAGTGCCATTTGAGAAACAGATACGAGTATAAGTTGGTAATGCTTTGTTTTGAAACAGATACCATAGTCCTTGTAGATTTCATATTGCTGTGTTTTAGAGTGTATTTGGAAATGTGTTCATAATGAAAAAGGCATATCC

mRNA sequence

AAAGAAAATAGCCATCTACCGCAAGAAGATGGCAAAATTGTAATTTCATAGTCGGGTTTATTCCAAAAGAAAACAGAACTTTTTGAGTGCAGTTTCTACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTCCCGGATTCACCAATTTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAACAATCCCCCTCTGCCAAAATTGATGTCATGGAATTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGAACAATGCGGGCGTTATGGCGACTCCGTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGTGCTTATTGGTTTAGTTATTGAATCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGGAGCGGCGACTCAGTGCTATGTGGCATTGAATCCCCAAGTGAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATGATTGTATCACTTATGAAAACCCTTCCTTACTCTTAGCTTCTCATCTCAGGCTTCATGTTAGAGATATATGGACAGTTTAATGGTGGAAGTAGATGAACCATTGTTTGTAGTTTTAAGTGCCATTTGAGAAACAGATACGAGTATAAGTTGGTAATGCTTTGTTTTGAAACAGATACCATAGTCCTTGTAGATTTCATATTGCTGTGTTTTAGAGTGTATTTGGAAATGTGTTCATAATGAAAAAGGCATATCC

Coding sequence (CDS)

ATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAACAATCCCCCTCTGCCAAAATTGATGTCATGGAATTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGAACAATGCGGGCGTTATGGCGACTCCGTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGTGCTTATTGGTTTAGTTATTGAATCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGGAGCGGCGACTCAGTGCTATGTGGCATTGAATCCCCAAGTGAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATGA

Protein sequence

MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLLRFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDLTTPK

Homology

[Close]

BLAST of Carg22201 vs. NCBI nr
Match: XP_023552364.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552365.1 short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 592.8 bits (1527), Expect = 6.8e-166
Identity = 309/317 (97.48%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RNVEAGKKVKEAVLK+SPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLK   G+ I +NALHPGAIAATNLL
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKE-EGVEITANALHPGAIAATNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM
Sbjct: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           ELAKKLWDFSMDLTTPK
Sbjct: 301 ELAKKLWDFSMDLTTPK 316

[Close]

BLAST of Carg22201 vs. NCBI nr
Match: XP_022984715.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 590.9 bits (1522), Expect = 2.6e-165
Identity = 307/317 (96.85%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGWTGPSGFSARSTA+EVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAKEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RNVEAGKKVKEAVLK+SPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLK   G+ I +NALHPGAIAATNLL
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKE-EGVEITANALHPGAIAATNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           RFHGLINAVATS+ATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM
Sbjct: 241 RFHGLINAVATSVATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           ELAKKLWDFSMDLTTPK
Sbjct: 301 ELAKKLWDFSMDLTTPK 316

[Close]

BLAST of Carg22201 vs. NCBI nr
Match: XP_022931508.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 588.2 bits (1515), Expect = 1.7e-164
Identity = 306/317 (96.53%), Postives = 311/317 (98.11%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RNVEAGKKVKEAVLK+SPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLSHDG+ELQFATNHIGHFLLTNLLLETMKKTVVE KKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGMELQFATNHIGHFLLTNLLLETMKKTVVECKKEGRIVNLSSEGHRLTYGEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLK   G+ I +NALHPGAIAATNLL
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKE-EGVEITANALHPGAIAATNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           RFHGLINAVATSIATFVLKNV+QGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM
Sbjct: 241 RFHGLINAVATSIATFVLKNVRQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           ELAKKLWDFSMDLTTPK
Sbjct: 301 ELAKKLWDFSMDLTTPK 316

[Close]

BLAST of Carg22201 vs. NCBI nr
Match: XP_004146522.1 (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis sativus] >KGN53338.1 Short-chain dehydrogenase [Cucumis sativus])

HSP 1 Score: 548.9 bits (1413), Expect = 1.1e-152
Identity = 283/317 (89.27%), Postives = 301/317 (94.95%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RN+EAG+KVKEAVLK+SPSAKIDVMELDLSSMESVRKFA+DYIASG  LNILMNNAGVMA
Sbjct: 61  RNIEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGLPLNILMNNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+TYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRITYGEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           +RF+KIN+ESEYRTI AYGQSKLSNILHAKELARRLKV  G+ I +NALHPG+I ATNLL
Sbjct: 181 IRFNKINNESEYRTILAYGQSKLSNILHAKELARRLKV-EGVEITANALHPGSI-ATNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           RFH  INAV   +A +VLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM
Sbjct: 241 RFHSTINAVTNLVAKYVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           +LAKKLWDFS+DLT PK
Sbjct: 301 DLAKKLWDFSVDLTNPK 315

[Close]

BLAST of Carg22201 vs. NCBI nr
Match: XP_022136624.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Momordica charantia])

HSP 1 Score: 548.9 bits (1413), Expect = 1.1e-152
Identity = 283/317 (89.27%), Postives = 302/317 (95.27%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RNVEAGKKVKEAV ++ PSAKID+MELDLSSMESVRKFASDYI+SGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVCQEFPSAKIDIMELDLSSMESVRKFASDYISSGRALNILMNNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLSHDGIELQFATNH+GHFLLTNLLL+TMKKTV+ESKKEGRIVNL+SEGHR+TYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHLGHFLLTNLLLDTMKKTVLESKKEGRIVNLASEGHRVTYGEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           +RFDKINDESEYRTI AYGQSKLSNILHAKELARRLK   G+ I +N+LHPGAI  TNLL
Sbjct: 181 IRFDKINDESEYRTILAYGQSKLSNILHAKELARRLKE-EGVEITANSLHPGAI-ITNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           RFHGLINAVA S+A FVLKNVQQGAATQCYVAL+PQVKGVSGEYF DSNI+NPTNHAKD 
Sbjct: 241 RFHGLINAVAGSVAKFVLKNVQQGAATQCYVALHPQVKGVSGEYFADSNISNPTNHAKDK 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           ELAKKLWDFS++LT+PK
Sbjct: 301 ELAKKLWDFSVELTSPK 315

[Close]

BLAST of Carg22201 vs. TAIR10
Match: AT4G11410.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 414.5 bits (1064), Expect = 6.0e-116
Identity = 211/314 (67.20%), Postives = 254/314 (80.89%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MW F W G SGFSARSTAEEVT GIDG GLTAIVTGASSG+GEETTRVLALRGV+V+MAV
Sbjct: 1   MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RN ++G +V++ +LK+ P AKIDVM+LDLSSM SVR FAS+Y +    LN+L+NNAG+MA
Sbjct: 61  RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
            PF+LS D IELQFATNH+GHFLLTNLLLE MKKT  ES +EGRIV +SSEGHR  Y EG
Sbjct: 121 CPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           V+FDKINDE+ Y T+ AYGQSKL NILHA ELAR  K   G+ I +N+LHPG+I  TNLL
Sbjct: 181 VQFDKINDEARYNTLQAYGQSKLGNILHATELARLFKEQ-GVNITANSLHPGSI-MTNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           R+H  IN +  ++  +VLK++ QGAAT CY AL+PQ KGVSGEY +D+NI++P +  KD 
Sbjct: 241 RYHSFINTIGNAVGKYVLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDK 300

Query: 301 ELAKKLWDFSMDLT 315
           +LAKKLW+FS+ LT
Sbjct: 301 DLAKKLWEFSLRLT 312

[Close]

BLAST of Carg22201 vs. TAIR10
Match: AT4G23430.2 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-114
Identity = 217/315 (68.89%), Postives = 255/315 (80.95%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVL+LRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RN ++G KVKE ++KQ P AK+DVMELDLSSM+SVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVNLSSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           VRFDKIND+S Y ++ AYGQSKL N+LHA EL ++LK   G+ I +N+LHPGAI  TNL 
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKE-DGVNITANSLHPGAI-MTNLG 240

Query: 241 RFHGLINAVAT-SIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKD 300
           R+     AVA  ++A ++LK+V QGAAT CYVALNPQV GVSGEYF DSNIA P    KD
Sbjct: 241 RYFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKD 300

Query: 301 MELAKKLWDFSMDLT 315
            ELAKK+WDFS  LT
Sbjct: 301 TELAKKVWDFSTKLT 313

[Close]

BLAST of Carg22201 vs. TAIR10
Match: AT4G23420.3 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 397.9 bits (1021), Expect = 5.9e-111
Identity = 209/305 (68.52%), Postives = 245/305 (80.33%), Query Frame = 0


Query: 10  SGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKV 69
           SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVLALRGV+V+MAVRN  AG KV
Sbjct: 27  SGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLALRGVHVVMAVRNTGAGAKV 86

Query: 70  KEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDG 129
           KE ++KQ P AK+DVMEL+LSSMESVRKFAS+Y ++G  LN+L+NNAG+MA PFMLS D 
Sbjct: 87  KEDIVKQVPGAKVDVMELELSSMESVRKFASEYKSAGLPLNLLINNAGIMACPFMLSKDN 146

Query: 130 IELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDE 189
           IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVN+SSE HR +Y EGVRFDKINDE
Sbjct: 147 IELQFATNHLGHFLLTKLLLDTMKNTSRESKREGRIVNVSSEAHRYSYPEGVRFDKINDE 206

Query: 190 SEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLLRFHGLINAV 249
           S Y +I AYGQSKL N+LHA ELA++LK   G+ I +N+LHPGAI       F+  +   
Sbjct: 207 SSYSSIRAYGQSKLCNVLHANELAKQLKE-DGVNITANSLHPGAIMTNLWGYFNSYLAGA 266

Query: 250 ATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDF 309
             ++A +++K+V QGAAT CYVALNPQV GV+GEYF DSNIA P    KD ELAKKLWDF
Sbjct: 267 VGAVAKYMVKSVPQGAATTCYVALNPQVAGVTGEYFSDSNIAKPIELVKDTELAKKLWDF 326

Query: 310 SMDLT 315
           S  LT
Sbjct: 327 STKLT 330

[Close]

BLAST of Carg22201 vs. TAIR10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 315.1 bits (806), Expect = 5.0e-86
Identity = 166/311 (53.38%), Postives = 221/311 (71.06%), Query Frame = 0


Query: 3   IFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRN 62
           I G  GPSGF + STAEEVT+GID   LTAI+TG + G+G ET RVL+ RG +V++  RN
Sbjct: 7   ITGRRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARN 66

Query: 63  VEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATP 122
           + A +  K  +L+Q+ +A++ +++LDLSS++S++ F  ++ A    LN+L+NNAGVM  P
Sbjct: 67  MGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCP 126

Query: 123 FMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVR 182
           + LS DGIELQFATNHIGHFLLTNLLL+TMK T   S  EGRI+N+SS  H  TY EG++
Sbjct: 127 YQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQ 186

Query: 183 FDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLLRF 242
           FD IND   Y    AYGQSKL+NILHA EL+R+L+   G+ I +N++HPG I  TNL + 
Sbjct: 187 FDSINDICSYSDKRAYGQSKLANILHANELSRQLQE-EGVNITANSVHPGLI-LTNLFQH 246

Query: 243 HGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMEL 302
             L+       + ++ KN+ QGAAT CYVAL+P VKGV+G+YF D N   P+  A+D  L
Sbjct: 247 TALLMRFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDETL 306

Query: 303 AKKLWDFSMDL 314
           A+KLWDFS+ L
Sbjct: 307 AQKLWDFSVKL 315

[Close]

BLAST of Carg22201 vs. TAIR10
Match: AT2G37540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 310.5 bits (794), Expect = 1.2e-84
Identity = 165/309 (53.40%), Postives = 218/309 (70.55%), Query Frame = 0


Query: 5   GWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVE 64
           G  G SGF + STAE+VT+ ID + LTAI+TG +SG+G E  RVLA+RG +VI+A RN +
Sbjct: 9   GKKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPK 68

Query: 65  AGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFM 124
           A  + KE +L+ +P+A++D +++D+SS++SVR F   ++A    LNIL+NNAGVM  PF 
Sbjct: 69  AANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFK 128

Query: 125 LSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFD 184
           L+ DGIE QFATNHIGHFLLTNLLL+ MK T  ES  +GRIVNLSS  H  TY EG++F 
Sbjct: 129 LTEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGIKFQ 188

Query: 185 KINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLLRFHG 244
            IND + Y    AYGQSKLSN+LH+  L+RRL+   G+ I  N++HPG +  TNL R+ G
Sbjct: 189 GINDPAGYSERRAYGQSKLSNLLHSNALSRRLQE-EGVNITINSVHPG-LVTTNLFRYSG 248

Query: 245 LINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAK 304
               V  ++     KN+ QGAAT CYVAL+P ++GV+G+YF D NI  P+  A +  LA 
Sbjct: 249 FSMKVFRAMTFLFWKNIPQGAATTCYVALHPDLEGVTGKYFGDCNIVAPSKFATNNSLAD 308

Query: 305 KLWDFSMDL 314
           KLWDFS+ L
Sbjct: 309 KLWDFSVFL 315

[Close]

BLAST of Carg22201 vs. Swiss-Prot
Match: sp|A2RVM0|TIC32_ARATH (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 6.0e-113
Identity = 217/315 (68.89%), Postives = 255/315 (80.95%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVL+LRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RN ++G KVKE ++KQ P AK+DVMELDLSSM+SVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVNLSSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           VRFDKIND+S Y ++ AYGQSKL N+LHA EL ++LK   G+ I +N+LHPGAI  TNL 
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKE-DGVNITANSLHPGAI-MTNLG 240

Query: 241 RFHGLINAVAT-SIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKD 300
           R+     AVA  ++A ++LK+V QGAAT CYVALNPQV GVSGEYF DSNIA P    KD
Sbjct: 241 RYFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKD 300

Query: 301 MELAKKLWDFSMDLT 315
            ELAKK+WDFS  LT
Sbjct: 301 TELAKKVWDFSTKLT 313

[Close]

BLAST of Carg22201 vs. Swiss-Prot
Match: sp|Q6RVV4|TIC32_PEA (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.1e-110
Identity = 211/318 (66.35%), Postives = 248/318 (77.99%), Query Frame = 0


Query: 1   MWIF-GWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMA 60
           MW F    G SGFS  STAE+VT GID  GLTAIVTGASSG+G ETTRVLALRG +VIM 
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 61  VRNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVM 120
           VRN+ A K VK+ +LK  PSAK+D +ELDLSS++SV+KFAS++ +SGR LNIL+NNAG+M
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 121 ATPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGE 180
           A PF LS D IELQFATNHIGHFLLTNLLL+TMKKT  ESKKEGRIVN++SE HR  Y E
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 181 GVRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNL 240
           G+RFDKIND+S Y    AYGQSKL+N+LHA +L + LK   G+ I +N+LHPG I  TNL
Sbjct: 181 GIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKE-DGVNITANSLHPGTI-VTNL 240

Query: 241 LRFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKD 300
            R +  +N +   I   VLKNVQQGAAT CYVAL+PQVKGVSGEYF DSN+   T H KD
Sbjct: 241 FRHNSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKD 300

Query: 301 MELAKKLWDFSMDLTTPK 318
           ++LAKKLWDFS++L   K
Sbjct: 301 VDLAKKLWDFSINLVKQK 316

[Close]

BLAST of Carg22201 vs. Swiss-Prot
Match: sp|Q9QYF1|RDH11_MOUSE (Retinol dehydrogenase 11 OS=Mus musculus OX=10090 GN=Rdh11 PE=1 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-45
Identity = 111/292 (38.01%), Postives = 172/292 (58.90%), Query Frame = 0


Query: 22  TEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKQSPSAK 81
           T  +   G  AIVTGA++G+G+ET + LA RG  V +A R+V+ G+     +   + +++
Sbjct: 31  TSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQ 90

Query: 82  IDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGH 141
           + V +LDL+  +S+R FA D++A  + L++L+NNAGVM  P+  + DG E+    NH+GH
Sbjct: 91  VFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGH 150

Query: 142 FLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQS 201
           FLLT+LLLE +K++        RIVNLSS GH L     + F  +  E  Y    AY  S
Sbjct: 151 FLLTHLLLEKLKESA-----PSRIVNLSSLGHHL---GRIHFHNLQGEKFYSAGLAYCHS 210

Query: 202 KLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLLRFHGLINAVATSIATFVLKNV 261
           KL+NIL  KELA+RLK   G  + + ++HPG +  + L R+  ++  +      F+ K  
Sbjct: 211 KLANILFTKELAKRLK---GSGVTTYSVHPGTV-HSELTRYSSIMRWLWQLFFVFI-KTP 270

Query: 262 QQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDL 314
           Q+GA T  Y AL   ++ +SG +F D  +A  +   ++  +A++LWD S DL
Sbjct: 271 QEGAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDL 309

[Close]

BLAST of Carg22201 vs. Swiss-Prot
Match: sp|Q8TC12|RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens OX=9606 GN=RDH11 PE=1 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-44
Identity = 110/285 (38.60%), Postives = 170/285 (59.65%), Query Frame = 0


Query: 29  GLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKQSPSAKIDVMELD 88
           G   +VTGA++G+G+ET + LA RG  V +A R+VE G+ V + +   + + ++ V +LD
Sbjct: 41  GKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLD 100

Query: 89  LSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGHFLLTNLL 148
           LS  +S+R FA  ++A  + L++L+NNAGVM  P+  + DG E+    NH+GHFLLT+LL
Sbjct: 101 LSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLL 160

Query: 149 LETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQSKLSNILH 208
           LE +K++        RIVN+SS  H L     + F  +  E  Y    AY  SKL+NIL 
Sbjct: 161 LEKLKESA-----PSRIVNVSSLAHHL---GRIHFHNLQGEKFYNAGLAYCHSKLANILF 220

Query: 209 AKELARRLKVLIGLVIESNALHPGAIAATNLLRFHGLINAVATSIATFVLKNVQQGAATQ 268
            +ELARRLK   G  + + ++HPG +  + L+R H         + +F +K  QQGA T 
Sbjct: 221 TQELARRLK---GSGVTTYSVHPGTV-QSELVR-HSSFMRWMWWLFSFFIKTPQQGAQTS 280

Query: 269 CYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDL 314
            + AL   ++ +SG +F D ++A  +  A++  +A++LWD S DL
Sbjct: 281 LHCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDL 312

[Close]

BLAST of Carg22201 vs. Swiss-Prot
Match: sp|Q8BYK4|RDH12_MOUSE (Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.5e-43
Identity = 106/292 (36.30%), Postives = 171/292 (58.56%), Query Frame = 0


Query: 22  TEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKQSPSAK 81
           T  +   G   ++TGA++G+G+ET R LA RG  V +A R+V  G+     +   + +++
Sbjct: 32  TTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQ 91

Query: 82  IDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGH 141
           + V +LDLS  +S+R FA  ++A  + L+IL+NNAGVM  P+  + DG E  F  NH+GH
Sbjct: 92  VLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGH 151

Query: 142 FLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQS 201
           FLLT LLLE +K++        R+VNLSS  H +     +RF  +  +  Y + FAYG S
Sbjct: 152 FLLTYLLLERLKESA-----PARVVNLSSIAHLI---GKIRFHDLQGQKRYCSAFAYGHS 211

Query: 202 KLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLLRFHGLINAVATSIATFVLKNV 261
           KL+N+L  +ELA+RL+   G  + + A+HPG +  + + R   L+  +    + F  K+ 
Sbjct: 212 KLANLLFTRELAKRLQ---GTGVTAYAVHPG-VVLSEITRNSYLLCLLWRLFSPF-FKST 271

Query: 262 QQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDL 314
            QGA T  + AL   ++ +SG+YF D      ++ A++ + A++LW+ S +L
Sbjct: 272 SQGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCEL 310

[Close]

BLAST of Carg22201 vs. TrEMBL
Match: tr|A0A0A0KUV5|A0A0A0KUV5_CUCSA (Short-chain dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_4G047990 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 7.5e-153
Identity = 283/317 (89.27%), Postives = 301/317 (94.95%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RN+EAG+KVKEAVLK+SPSAKIDVMELDLSSMESVRKFA+DYIASG  LNILMNNAGVMA
Sbjct: 61  RNIEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGLPLNILMNNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+TYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRITYGEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           +RF+KIN+ESEYRTI AYGQSKLSNILHAKELARRLKV  G+ I +NALHPG+I ATNLL
Sbjct: 181 IRFNKINNESEYRTILAYGQSKLSNILHAKELARRLKV-EGVEITANALHPGSI-ATNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           RFH  INAV   +A +VLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM
Sbjct: 241 RFHSTINAVTNLVAKYVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           +LAKKLWDFS+DLT PK
Sbjct: 301 DLAKKLWDFSVDLTNPK 315

[Close]

BLAST of Carg22201 vs. TrEMBL
Match: tr|A0A1S3BU18|A0A1S3BU18_CUCME (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103493161 PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 4.9e-152
Identity = 283/317 (89.27%), Postives = 298/317 (94.01%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RNVEAG+KVKEAVLK+SPSAKIDVMELDLSSMESVRKFA+DYIASGR LNILMNNAGVMA
Sbjct: 61  RNVEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGRPLNILMNNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPF LSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+ YGEG
Sbjct: 121 TPFTLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRMAYGEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           +RFDKIN+E+EYRTI AYGQSKLSNILHAKELARRLK   G+ I +NALHPGAI ATNLL
Sbjct: 181 IRFDKINNEAEYRTILAYGQSKLSNILHAKELARRLKE-EGVEITANALHPGAI-ATNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           RFH  INAV   +A FVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPT HAKDM
Sbjct: 241 RFHSTINAVTNLVAKFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTKHAKDM 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           +LAKKLWDFS+DLT PK
Sbjct: 301 DLAKKLWDFSVDLTNPK 315

[Close]

BLAST of Carg22201 vs. TrEMBL
Match: tr|A0A2I4H8M5|A0A2I4H8M5_9ROSI (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109014479 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 4.0e-130
Identity = 244/317 (76.97%), Postives = 274/317 (86.44%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGW GPSGFSA STAE+VT+GIDG GLTAIVTGASSGLG ETTR+LALR V+VIMAV
Sbjct: 31  MWIFGWKGPSGFSACSTAEQVTQGIDGTGLTAIVTGASSGLGAETTRILALRAVHVIMAV 90

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RN++AG+  KE +LK+ P+AKIDVMELDLSSM SVRKFASDY   G  LNIL+NNAGVMA
Sbjct: 91  RNMDAGRNAKEEILKEIPNAKIDVMELDLSSMGSVRKFASDYTELGLPLNILINNAGVMA 150

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           +PFMLS D IELQFATNH+GHFLLTNLLLETMKKT  ESKKEGRIVNL+SEGHR TY EG
Sbjct: 151 SPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTAHESKKEGRIVNLASEGHRFTYHEG 210

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           +RFDKINDE+ Y T+FAYGQSKL+NILHA ELARRLK   G+ I +N+LHPGAI  TNLL
Sbjct: 211 IRFDKINDETGYNTLFAYGQSKLANILHANELARRLKE-EGVEITANSLHPGAI-VTNLL 270

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           R HG INA+A  +  +VLKNV QGAATQCYVAL+PQV+GVSGEYF+DSN A P+ HAKD+
Sbjct: 271 RHHGFINAIANVLGKYVLKNVHQGAATQCYVALHPQVEGVSGEYFMDSNKAKPSTHAKDV 330

Query: 301 ELAKKLWDFSMDLTTPK 318
           ELAKKLWDFS+DLT  K
Sbjct: 331 ELAKKLWDFSVDLTNQK 345

[Close]

BLAST of Carg22201 vs. TrEMBL
Match: tr|M5WB87|M5WB87_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G101600 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 2.9e-128
Identity = 242/317 (76.34%), Postives = 274/317 (86.44%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGW G SGFSARSTAEEVT+GIDG GLTAIVTGASSGLG ETTRVLALR V+VIMAV
Sbjct: 1   MWIFGWKGQSGFSARSTAEEVTQGIDGTGLTAIVTGASSGLGLETTRVLALRRVHVIMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RN EAG+ V+ A+LK+ P+A I+VMELDLSSM SVRKFAS+Y +SG  LNIL+NNAGVMA
Sbjct: 61  RNTEAGRDVRTAILKEIPTANINVMELDLSSMASVRKFASEYNSSGLPLNILINNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLS D IELQFATNH+GHFLLTNLLLETMKKT  ESKKEGRIVNLSSE HR  Y EG
Sbjct: 121 TPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTTRESKKEGRIVNLSSEAHRFAYSEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           +RFDKINDES Y +I+AYGQSKL+NILHA EL +RLK   G+ I +N+LHPG+I ATNLL
Sbjct: 181 IRFDKINDESGYSSIYAYGQSKLANILHANELTKRLKE-EGVAITANSLHPGSI-ATNLL 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           R+H  IN +A+++   +LKNVQQGAAT+CYVAL+PQVKGVSGEYF+DSN ANPT+ AKD 
Sbjct: 241 RYHSYINVIASTLGRLMLKNVQQGAATECYVALHPQVKGVSGEYFMDSNKANPTSQAKDP 300

Query: 301 ELAKKLWDFSMDLTTPK 318
           ELAKKLWDFS+ LT PK
Sbjct: 301 ELAKKLWDFSLSLTDPK 315

[Close]

BLAST of Carg22201 vs. TrEMBL
Match: tr|A0A1R3GKK3|A0A1R3GKK3_9ROSI (Short-chain dehydrogenase/reductase SDR OS=Corchorus olitorius OX=93759 GN=COLO4_34480 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 4.1e-127
Identity = 237/317 (74.76%), Postives = 267/317 (84.23%), Query Frame = 0


Query: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60
           MWIFGW GPSGFSA STAEEVT+GIDG GLTAIVTGASSG+G ET RVLALRGV+V+MAV
Sbjct: 1   MWIFGWKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGVETARVLALRGVHVVMAV 60

Query: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120
           RNVEAGK VKE +LK+ P AKIDVMELDLSSM SVRKFAS+Y++S   LN+L+NNAGVMA
Sbjct: 61  RNVEAGKNVKETILKEIPGAKIDVMELDLSSMASVRKFASEYLSSCLPLNLLINNAGVMA 120

Query: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180
           TPFMLSHD IELQFATNHIGHFLLT+LLLETMKKT  ES +EGRIV LSSEGHR  Y EG
Sbjct: 121 TPFMLSHDSIELQFATNHIGHFLLTDLLLETMKKTARESNREGRIVILSSEGHRFAYSEG 180

Query: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240
           +RFDKINDE  Y + +AYGQSKL+NILHAKELARRLK   G+ I +N+LHPGAI +TNL+
Sbjct: 181 IRFDKINDEPGYFSWYAYGQSKLANILHAKELARRLKE-EGVDITANSLHPGAIISTNLM 240

Query: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300
           R HG++N V      + LKN+ QGAAT CYVAL+PQVKGVSGEYF DSN+ANP + AKD 
Sbjct: 241 RHHGIVNTVGQMFGKYFLKNIPQGAATTCYVALHPQVKGVSGEYFSDSNVANPNSKAKDA 300

Query: 301 ELAKKLWDFSMDLTTPK 318
            LAK+LWDFS  LT PK
Sbjct: 301 NLAKRLWDFSSTLTNPK 316

The following BLAST results are available for this feature:

BLAST of Carg22201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552364.1	6.8e-166	97.48	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo ...	[more]
XP_022984715.1	2.6e-165	96.85	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima]	[more]
XP_022931508.1	1.7e-164	96.53	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata]	[more]
XP_004146522.1	1.1e-152	89.27	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis sativus] >KG...	[more]
XP_022136624.1	1.1e-152	89.27	short-chain dehydrogenase TIC 32, chloroplastic-like [Momordica charantia]	[more]

BLAST of Carg22201 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11410.1	6.0e-116	67.20	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.2	3.3e-114	68.89	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23420.3	5.9e-111	68.52	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G02540.1	5.0e-86	53.38	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G37540.1	1.2e-84	53.40	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Carg22201 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A2RVM0\|TIC32_ARATH	6.0e-113	68.89	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q6RVV4\|TIC32_PEA	2.1e-110	66.35	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
sp\|Q9QYF1\|RDH11_MOUSE	1.8e-45	38.01	Retinol dehydrogenase 11 OS=Mus musculus OX=10090 GN=Rdh11 PE=1 SV=2	[more]
sp\|Q8TC12\|RDH11_HUMAN	1.6e-44	38.60	Retinol dehydrogenase 11 OS=Homo sapiens OX=9606 GN=RDH11 PE=1 SV=2	[more]
sp\|Q8BYK4\|RDH12_MOUSE	6.5e-43	36.30	Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1	[more]

BLAST of Carg22201 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUV5\|A0A0A0KUV5_CUCSA	7.5e-153	89.27	Short-chain dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_4G047990 PE=4 SV=1	[more]
tr\|A0A1S3BU18\|A0A1S3BU18_CUCME	4.9e-152	89.27	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A2I4H8M5\|A0A2I4H8M5_9ROSI	4.0e-130	76.97	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Juglans regia OX=51240 G...	[more]
tr\|M5WB87\|M5WB87_PRUPE	2.9e-128	76.34	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G101600 PE=4 SV=1	[more]
tr\|A0A1R3GKK3\|A0A1R3GKK3_9ROSI	4.1e-127	74.76	Short-chain dehydrogenase/reductase SDR OS=Corchorus olitorius OX=93759 GN=COLO4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR002347	SDR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22201-RA	Carg22201-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 163..171 score: 52.74 coord: 107..118 score: 42.56 coord: 198..217 score: 25.97
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 222..239 score: 27.64 coord: 107..118 score: 44.33 coord: 157..173 score: 30.31 coord: 198..217 score: 27.16 coord: 31..48 score: 40.58
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 31..172 e-value: 1.7E-23 score: 83.0
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 22..316 e-value: 6.2E-72 score: 244.1
None	No IPR available	PANTHER	PTHR24320	FAMILY NOT NAMED	coord: 4..315
None	No IPR available	PANTHER	PTHR24320:SF146	SUBFAMILY NOT NAMED	coord: 4..315
None	No IPR available	CDD	cd05327	retinol-DH_like_SDR_c_like	coord: 29..307 e-value: 3.21737E-94 score: 282.191
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 29..291

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22201	Cla014631	Watermelon (97103) v1	carwmB0588
Carg22201	Csa4G047990	Cucumber (Chinese Long) v2	carcuB0617
Carg22201	MELO3C016354	Melon (DHL92) v3.5.1	carmeB0596
Carg22201	ClCG07G008100	Watermelon (Charleston Gray)	carwcgB0577
Carg22201	CSPI04G05780	Wild cucumber (PI 183967)	carcpiB0623
Carg22201	Cucsa.106800	Cucumber (Gy14) v1	carcgyB0663
Carg22201	CmaCh16G005940	Cucurbita maxima (Rimu)	carcmaB0825
Carg22201	CmoCh04G007830	Cucurbita moschata (Rifu)	carcmoB0804
Carg22201	CmoCh16G006440	Cucurbita moschata (Rifu)	carcmoB0803
Carg22201	Cp4.1LG14g02170	Cucurbita pepo (Zucchini)	carcpeB0838
Carg22201	CsGy4G005650	Cucumber (Gy14) v2	carcgybB0589
Carg22201	MELO3C016354.2	Melon (DHL92) v3.6.1	carmedB0603
Carg22201	CsaV3_4G005940	Cucumber (Chinese Long) v3	carcucB0624
Carg22201	Cla97C07G135250	Watermelon (97103) v2	carwmbB0618
Carg22201	Bhi01G001807	Wax gourd	carwgoB0702

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22201	Silver-seed gourd	carcarB535
Carg22201	Cucurbita maxima (Rimu)	carcmaB0826
Carg22201	Cucurbita pepo (Zucchini)	carcpeB0839
Carg22201	Bottle gourd (USVL1VR-Ls)	carlsiB535