Cp4.1LG14g01730 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g01730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6, putative
Location	Cp4.1LG14 : 3374888 .. 3377982 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCTTCTTCTTCGACAAAGCGGAGAAGGTTTCAAGCTCTGTTCCGAGATGCAATCTCCTCCAACTCTTCGCCAAGTTCTTCCGTTTCATCGAGTTCTGCTTTCTACTGGTTTTCCTCTCCTGGACTTTCTCTAGGCTTCCGATCGCCGTCAGAATCTCCAGCGAGTATTTCGGAAAACTCCTCGGCTTCATCGCGAGTCCTCTCTTCGGATTCCTCCTCTGTAACGCCATCATCGTCGCACTCGTAGCAAAACCTAGCCAATTCTCAGGCTACAGCGCTGAAACCGAACGGATTTACGAAAACCTAATTGAAAAATCCGGAAGTCGCGACCTACCTGATTCGCTTGCGGAACGCGATTCTTCAATCGCAGAGGAGGTGGAGATTGTGTACCAGGATAAACAGATCATCGTGGAGTCGGAATCAGTAGTAGATCATCCGAAAGTGATTTTGAGGAGTTTATCGGAGAAACTTACGCGAGAATGCGTGACGACACAGAGTGAGAAGCTTCGGCGATCGGAGACGGAGAAGTGCCGGAATCTGGAACATTCGCACGACATTTTGTTCTTCCAGGAAGATTTGAGTAATGAAGATTTTCAGAAGAAGATTGAAGCGTTCATTGCGAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTGCGCCATTGTACTCCGCTGCGACGGTTAACCTCCGCCTGAAAAAAAAAAAAAAAAAAAAAAAAAACTCGGTTGTACTATTTGATCCTGTGGAATGTACAGAGTAAAATTTCTTTTCACTCATGAAGGGTAAAATTGGTATTTCACCTTCGTTTTTTTTTGAAATTGGGTTCTATTTATCTGTTACTCGTCCTATTTTTACTCGGTGGACTTGCATTTGACAATTGATCTGCACCGTTAATACGAGATCATGAAAATAGTATATGTTTAAATTAATATGCAATTTTTTAACTATTAATTCTTTTTAAGTGGTATTTTTTTTAGTGAAAGAAAAAGATATAATTAAAGAAATTTAATCATATAGTTTGATTATTAATTATTTAGCTAGAGCTTATTATAGGAATAGACTTTAATGATTAAGCAATAAAATAACATTATATTTTCGCATAAATGATTATGACATCAGCATTAATTTGAAAGCTTTAAACAAATTTCACCATTAATTCTCTCTCTAAAACCCATAAAAATTAATTATTTTTGTTGGGCTAAGTGATTTAATGTATTGGGAGAGGGCAATTAATCATCAATAAATGATTTATGTTCATCATATTGTCCCTTATAAAATGTAAATTTATATGCGGGTTTGAAACGTTTTTGCTTGTTCACATATCGTTTCGTTACTTGATTTTGTACCGTTATGTTTCAAATTCAAGAAAGAACGAAATAAGCATTTGTTTTGAGACTACATTCTAATGGTATGTTGTGTTTCTACTCCCATGACCCTCCGTCGTACATACTATGCTCGAAAAGTCGATGAAAAGTAAGAAGAAAAGAGAAGTCCGGAAAAATGCTTTACTTAGCATTTCTATAGTACGACACTCAAGTAAATGAGAGATACATAAATAAACTAAGACCGCGTCCAAATGAGAGTGATTTTGAGTATAGGATGACTGAAAAAAACATAAAAGAATTGAAAGTTACTACGTATACTAATAAGGTGCACCTTCCTTATCAGTGGTTCAATCATAAGAACGTTATGATTAAGCATGTTTCACTTAGAACAATTCTATGTTCCTAAAATGCATGTAAGTGAAGACAAAACGTGCCCAAAGAACTTGTGTTGGTCTATGCGATAGTAACATGATCATTAGTTCCACCATGATTACCGTTTGAGTGTGTCTTTCCATTTGAAATGACTATCTACTTCGATTCTAATGGACAAACCATAAGAGCAGACATGTTAATAGAGTTAGACAGAGAGACAAGGCTACTTATCAGGTCAGATAGACGTCTGGTTTGTAAGCTATCCCCTCTTAAAAACCCAGAATTGGTTACGCGCAATACGCCGATAACTTACTCTCGAGAATCATAAATGTCGTAGAGCTTCTCATAAAAAATACAAAAATGCATCGCCCACTTCCTACAAGTCGGCCTAAATATATAGCCCACCACCTTTTTGCCCTTTTTCTTCTTCTTTTGGCTTCTTTCCTCATTATAATATTATCATGCCTCTTCAATTGTTTTTAGGTTTAGGGTTTTTCTTTAATGTTCTAAATAACATGCTCCTTGTCCTTATCCATAACTAGGTATAGCTTTATCAAATTTTGATGATAATAAGATTAATTAGTTAATAAATTATGTTTAACAAAATTAATCCTAGTTCGTGTGTTTTTTTATTATTATTATTAGTACACTGATTCGGGCATGAAAATTTGAACTTTTAACGTGTGTCCCTTGATATGGGGAAATCACTGCGATGGGAGTAAAATTCAGATTACCTTGTTGATCGAATATCTCAATGCAAGAACATTGATTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGATCAAATATCTCAAGGCAAAAACACTTGATTGAGATTCGAATCACTCCACAACCAAGATTGATCATGTCGAGCTTGAATGATTTTACATGCAACCTAAACTCCATACAATTACAAAAAAACTTAGTCATTGGCTAAAGAAAAGCACAGATGCTTCTTTTACTATATTTTTCAAGTCTACTTACAAATACAACATACATGACTTTATATAGTCTCAAAATGAAACTATTAAAGACATTCCGAGAGTTGTAACATTCATACTTAATAACCCTAATTTAATAAATAACTCTAAATTGTAATCCACCCAAAATTTATAACATGAAACTTCATTCTTCTTCAACGTGGCATGAATTGAAATATCTTTTGATAATTTCAACAATATTTTCTTCACATTTTCATTGAAGTATACTGTATAATTGATGTCTCTTGGTTCATATCATCCCTCGTCCATCTCAAACGAGTTTACGGCTCTGCGACCCTTTTCAAAAGGCCCTTAACCTGTTTCCATACTCAGATGGCACCAAAGGTCACCTTAATGCACTATCCTATCAAGCTAATCTAGGTTAA

mRNA sequence

ATGGATTTCTTCTTCTTCGACAAAGCGGAGAAGGTTTCAAGCTCTGTTCCGAGATGCAATCTCCTCCAACTCTTCGCCAAGTTCTTCCGTTTCATCGAGTTCTGCTTTCTACTGGTTTTCCTCTCCTGGACTTTCTCTAGGCTTCCGATCGCCGTCAGAATCTCCAGCGAGTATTTCGGAAAACTCCTCGGCTTCATCGCGAGTCCTCTCTTCGGATTCCTCCTCTGTAACGCCATCATCGTCGCACTCGTAGCAAAACCTAGCCAATTCTCAGGCTACAGCGCTGAAACCGAACGGATTTACGAAAACCTAATTGAAAAATCCGGAAGTCGCGACCTACCTGATTCGCTTGCGGAACGCGATTCTTCAATCGCAGAGGAGGTGGAGATTGTGTACCAGGATAAACAGATCATCGTGGAGTCGGAATCAGTAGTAGATCATCCGAAAGTGATTTTGAGGAGTTTATCGGAGAAACTTACGCGAGAATGCGTGACGACACAGAGTGAGAAGCTTCGGCGATCGGAGACGGAGAAGTGCCGGAATCTGGAACATTCGCACGACATTTTGTTCTTCCAGGAAGATTTGAATGGCACCAAAGGTCACCTTAATGCACTATCCTATCAAGCTAATCTAGGTTAA

Coding sequence (CDS)

ATGGATTTCTTCTTCTTCGACAAAGCGGAGAAGGTTTCAAGCTCTGTTCCGAGATGCAATCTCCTCCAACTCTTCGCCAAGTTCTTCCGTTTCATCGAGTTCTGCTTTCTACTGGTTTTCCTCTCCTGGACTTTCTCTAGGCTTCCGATCGCCGTCAGAATCTCCAGCGAGTATTTCGGAAAACTCCTCGGCTTCATCGCGAGTCCTCTCTTCGGATTCCTCCTCTGTAACGCCATCATCGTCGCACTCGTAGCAAAACCTAGCCAATTCTCAGGCTACAGCGCTGAAACCGAACGGATTTACGAAAACCTAATTGAAAAATCCGGAAGTCGCGACCTACCTGATTCGCTTGCGGAACGCGATTCTTCAATCGCAGAGGAGGTGGAGATTGTGTACCAGGATAAACAGATCATCGTGGAGTCGGAATCAGTAGTAGATCATCCGAAAGTGATTTTGAGGAGTTTATCGGAGAAACTTACGCGAGAATGCGTGACGACACAGAGTGAGAAGCTTCGGCGATCGGAGACGGAGAAGTGCCGGAATCTGGAACATTCGCACGACATTTTGTTCTTCCAGGAAGATTTGAATGGCACCAAAGGTCACCTTAATGCACTATCCTATCAAGCTAATCTAGGTTAA

Protein sequence

MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGYSAETERIYENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLNGTKGHLNALSYQANLG

Homology

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BLAST of Cp4.1LG14g01730 vs. TrEMBL
Match: A0A0A0KY10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046600 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 8.7e-59
Identity = 139/219 (63.47%), Postives = 164/219 (74.89%), Query Frame = 1


Query: 1   MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEYFG 60
           MDFFFFDKAEK+S+ +PRCNLLQ+F+KFFRF+E  FLL+ LSW FSRLPIA+RIS+EY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLLGFIASPLFGFLLCNAIIVALVAKPSQFSGY-SAETERIYENLIEKSGS-RDLPDSLA 120
           KL  FIA+PLFGFLLCNAIIVALVAKPSQFS   ++ET RIYE+LI+K+G+  DL DS +
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 ERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSE 180
           E      E  EIVYQDKQII                     +ESES +   KVILRSLSE
Sbjct: 121 E------EVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSE 180

Query: 181 KLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLN 197
           KL RECV T+SEKLRRSETEKC NLE ++DIL +Q+DL+
Sbjct: 181 KLNRECVKTKSEKLRRSETEKCGNLECTNDILCYQDDLS 213

[Close]

BLAST of Cp4.1LG14g01730 vs. TrEMBL
Match: A0A0D2T1L0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G066400 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.7e-23
Identity = 87/217 (40.09%), Postives = 120/217 (55.30%), Query Frame = 1


Query: 1   MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEY 60
           MD F FD  KAEK + ++ R N L+  AK FRF+E    L+F +WTF R+P AV+IS  +
Sbjct: 1   MDSFGFDNVKAEK-AKAMRRFNRLRSLAKAFRFLELLSALLFFAWTFERVPFAVKISGVF 60

Query: 61  FGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGYSAETERIYENLIEKSGSRDLPDSLA 120
             KL G +ASPLF FL+ N IIV L+AK   FS  +    +IY+ +I            A
Sbjct: 61  LLKLGGVVASPLFVFLVSNVIIVTLIAKSGIFSAVNNVDSKIYDEIINN----------A 120

Query: 121 ERDSSIAEEVEIVYQDKQIIVE------------------SESVVDHPKVILRSLSEKLT 180
           E  S    + E++YQDK+II E                  SE  +D+P+V  RS SEKL 
Sbjct: 121 ENRSKSECQKEVLYQDKEIISEASIDTLSSEETEPEPEPDSEFEMDYPRVYRRSKSEKLA 180

Query: 181 -RECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLN 197
            R+     + +LRRSETEKCR +E+    L  +++L+
Sbjct: 181 IRKSGEEVTRELRRSETEKCRKVENMDGELVPEDELS 206

[Close]

BLAST of Cp4.1LG14g01730 vs. TrEMBL
Match: A0A0D2SGW9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G201500 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22
Identity = 87/219 (39.73%), Postives = 119/219 (54.34%), Query Frame = 1


Query: 1   MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEY 60
           MD F+F   K EKV + + + N L+  AK FR  E    L+FL+WT  R+P AV+IS E+
Sbjct: 1   MDSFYFHNVKTEKVKA-MRKYNRLRSIAKVFRIFEVLSALLFLAWTAERVPFAVKISGEF 60

Query: 61  FGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGYSAETERIYENLIEKSGSRDLPDSLA 120
             KL G IASP F FL+CN II+ L+AK   FS       ++ E +I+           A
Sbjct: 61  VLKLGGIIASPFFVFLICNVIIITLIAKSGIFSAVRNADSKVCEEIIKT----------A 120

Query: 121 ERDSSIAEEVEIVYQDKQIIVE--------------------SESVVDHPKVILRSLSEK 180
           +  S    + EIVYQDK+II E                    S+   D+P+V  RS SEK
Sbjct: 121 DTHSKSVSQEEIVYQDKEIISEVNTSTRECEDMEPEPEPESDSDFEADNPRVYRRSKSEK 180

Query: 181 LTRECVTTQSEKLRRSETE-KCRNLEHSHDILFFQEDLN 197
           L RE V    ++LRRSE+E KCR +E+  + LF ++DL+
Sbjct: 181 LEREKV---KKELRRSESEKKCRKIENMDEKLFPEDDLS 205

[Close]

BLAST of Cp4.1LG14g01730 vs. TrEMBL
Match: A0A0D2T5U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G100900 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-22
Identity = 81/205 (39.51%), Postives = 119/205 (58.05%), Query Frame = 1


Query: 1   MDFFFFDKA-EKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEYF 60
           MD + FD   E+ + ++ R N LQ  AK F F+E    L+FL+WTF RLP AV+IS ++ 
Sbjct: 1   MDSYDFDSVKEEKAKAMKRYNWLQAPAKVFHFLELLIALLFLAWTFERLPFAVKISGDFV 60

Query: 61  GKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGYSAETERIYE----NLIEKSGSRDLPD 120
            KL G IASPLF FL+CN II  L+AK   FS  +    ++YE    N+ E     +  +
Sbjct: 61  LKLCGVIASPLFVFLVCNVIIAILIAKSGIFSTVNNADPKLYEEITKNVEEDRSKLESQE 120

Query: 121 SLAERDSSIAEEVEIVYQDKQIIV---ESESVVDHPKVILRSLSEKLTRECVTTQSEK-L 180
              +RD  I  EV+   + ++ +    ES+S VD+P V  RS SEKL  +    +++K L
Sbjct: 121 EDEDRDKEIISEVKKCSRTREEMERPSESDSEVDNPGVYRRSKSEKLAVKKKEEKAKKEL 180

Query: 181 RRSETEKCRNLEHSHDILFFQEDLN 197
           RRS ++KCR  E+  D L  +++L+
Sbjct: 181 RRSASKKCRKNENIDDELLPEDELS 205

[Close]

BLAST of Cp4.1LG14g01730 vs. TrEMBL
Match: A0A067LJV9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22166 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 90/223 (40.36%), Postives = 122/223 (54.71%), Query Frame = 1


Query: 1   MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEY 60
           MDFF FD  KAEK  + +   N L+   K FR +EFC  LVF+SW  +RLP A +IS E+
Sbjct: 1   MDFFNFDNVKAEKAGAML-WYNHLRCLTKLFRLLEFCLALVFVSWLSNRLPFAFKISGEF 60

Query: 61  FGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGY-----SAETERIYENLIEKSGSRDL 120
           F K+ G IASP+F F+LCN+II AL+ K  +FSG      +AETE +YE L++K+ +R  
Sbjct: 61  FRKIAGVIASPIFVFMLCNSIIAALIFKSRRFSGENPAADNAETE-LYEELLKKNENR-C 120

Query: 121 PDSLAERDS-------SIAEEVEIVYQDKQIIV--------------------------- 180
            + L+E  S          E++E  +QDK++I+                           
Sbjct: 121 SEPLSENPSPSPYLPFHATEQIE--FQDKEVIISEVNAFSQTGEGDNDTVEFHLSSFSGS 180

Query: 181 ESESVVDHPKVILRSLSEKLTRECVTTQS-EKLRRSETEKCRN 182
           + ES  D P+V  RS SEKL R+     S  KL+RSETEK  N
Sbjct: 181 DLESDSDTPRVYRRSKSEKLDRKLSEKDSMNKLQRSETEKYIN 218

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BLAST of Cp4.1LG14g01730 vs. TAIR10
Match: AT5G66440.1 (AT5G66440.1 unknown protein)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15
Identity = 81/241 (33.61%), Postives = 118/241 (48.96%), Query Frame = 1


Query: 1   MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEY 60
           MD F FD  KAEK + ++ R N      +FFR  E C  L+F+ WTFS+LP  V+IS  +
Sbjct: 1   MDSFDFDNVKAEK-AKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAF 60

Query: 61  FGKLLGFIASPLFGFLLCNAIIVALVAKPSQ---FSGYSAETERIYENLIEKSGSRDLPD 120
             ++   I++PLF FLL N+I+V L+ K S     +  SAETE IY+  +    +R  P 
Sbjct: 61  LRRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETE-IYQAFVRSVENRSKPS 120

Query: 121 SLAERDSSIAEEVEIVYQDKQIIV--------------------ESESVVDHPKVILRSL 180
                D  + E   IVY DKQ+IV                    +S+S   H KV  RS 
Sbjct: 121 -----DEDLTE--GIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDS-SPHSKVYGRSK 180

Query: 181 SE----KLTRECVTTQSEKLRRSETEK-CRNLEHSHDILFFQEDLNGTKGHLNALSYQAN 212
           S+    + +   +      L+RSETEK C+  E+  D    +E+ N  +  L+   +Q  
Sbjct: 181 SDVSGKQSSNMVMMMMKRSLQRSETEKFCKETENDDD---SEEEKNYPEDDLSNEEFQKT 228

[Close]

BLAST of Cp4.1LG14g01730 vs. NCBI nr
Match: gi|659102374|ref|XP_008452094.1| (PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 3.9e-60
Identity = 136/214 (63.55%), Postives = 166/214 (77.57%), Query Frame = 1


Query: 1   MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEYFG 60
           MDFFFFDKAEK+S+ +PRCNLLQ+F+KFFRF+E  FLL+ LSW FSRLPIA+RIS++YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLLGFIASPLFGFLLCNAIIVALVAKPSQFS--GYSAETERIYENLIEKSGS-RDLPDSL 120
           KL  FIA+PLFGFLLCNAIIVALVAKPSQFS    S +T+RIYE+LIEK+G+  DL DS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 AERDSSIA-EEVEIVYQD--------------KQIIVESESVVDHPKVILRSLSEKLTRE 180
           +E    I  ++ EI+ +               K   +ES+S + H KVILRSLSEKL RE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLN 197
           CV TQSEKLRRSETEKCRNLE+S+DIL++Q+DL+
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLS 214

[Close]

BLAST of Cp4.1LG14g01730 vs. NCBI nr
Match: gi|778690713|ref|XP_011653156.1| (PREDICTED: uncharacterized protein LOC105435182 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58
Identity = 139/219 (63.47%), Postives = 164/219 (74.89%), Query Frame = 1


Query: 1   MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEYFG 60
           MDFFFFDKAEK+S+ +PRCNLLQ+F+KFFRF+E  FLL+ LSW FSRLPIA+RIS+EY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLLGFIASPLFGFLLCNAIIVALVAKPSQFSGY-SAETERIYENLIEKSGS-RDLPDSLA 120
           KL  FIA+PLFGFLLCNAIIVALVAKPSQFS   ++ET RIYE+LI+K+G+  DL DS +
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 ERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSE 180
           E      E  EIVYQDKQII                     +ESES +   KVILRSLSE
Sbjct: 121 E------EVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSE 180

Query: 181 KLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLN 197
           KL RECV T+SEKLRRSETEKC NLE ++DIL +Q+DL+
Sbjct: 181 KLNRECVKTKSEKLRRSETEKCGNLECTNDILCYQDDLS 213

[Close]

BLAST of Cp4.1LG14g01730 vs. NCBI nr
Match: gi|1009144810|ref|XP_015890003.1| (PREDICTED: uncharacterized protein LOC107424669 [Ziziphus jujuba])

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27
Identity = 98/211 (46.45%), Postives = 119/211 (56.40%), Query Frame = 1


Query: 1   MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEY 60
           MD F FD  KAEK +S++ + N L+  AK FRF E    L+ LSWTF+RLP AV+IS EY
Sbjct: 1   MDTFDFDNVKAEK-ASAMRKYNRLRSLAKVFRFAELFVALLVLSWTFTRLPFAVKISGEY 60

Query: 61  FGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGY-----SAETERIYENLIEKSGS--- 120
           F KLL  I SPLF F+LCN IIV+L+AK  +FSG      S E E +YE +   S S   
Sbjct: 61  FRKLLTVIVSPLFVFILCNGIIVSLIAKSGKFSGQNQSANSVEAE-LYEEITRNSSSSSE 120

Query: 121 RDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVV----------------DHPKVILRS 180
           R + +S +E  SS  E   IVY DKQII E  +                  DHPK   R+
Sbjct: 121 RTMSESESETQSSATEN--IVYDDKQIISEVNTTTATQNEVETDTDSNPDSDHPKSYRRT 180

Query: 181 LSEKLTRECVTTQSEKLRRSETEKCRNLEHS 186
            SEK  REC      +LRRSETEK  N+  S
Sbjct: 181 QSEKFNRECSVKNHGELRRSETEKFVNITKS 207

[Close]

BLAST of Cp4.1LG14g01730 vs. NCBI nr
Match: gi|823205694|ref|XP_012436865.1| (PREDICTED: uncharacterized protein LOC105763265 [Gossypium raimondii])

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 87/217 (40.09%), Postives = 120/217 (55.30%), Query Frame = 1


Query: 1   MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEY 60
           MD F FD  KAEK + ++ R N L+  AK FRF+E    L+F +WTF R+P AV+IS  +
Sbjct: 1   MDSFGFDNVKAEK-AKAMRRFNRLRSLAKAFRFLELLSALLFFAWTFERVPFAVKISGVF 60

Query: 61  FGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGYSAETERIYENLIEKSGSRDLPDSLA 120
             KL G +ASPLF FL+ N IIV L+AK   FS  +    +IY+ +I            A
Sbjct: 61  LLKLGGVVASPLFVFLVSNVIIVTLIAKSGIFSAVNNVDSKIYDEIINN----------A 120

Query: 121 ERDSSIAEEVEIVYQDKQIIVE------------------SESVVDHPKVILRSLSEKLT 180
           E  S    + E++YQDK+II E                  SE  +D+P+V  RS SEKL 
Sbjct: 121 ENRSKSECQKEVLYQDKEIISEASIDTLSSEETEPEPEPDSEFEMDYPRVYRRSKSEKLA 180

Query: 181 -RECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLN 197
            R+     + +LRRSETEKCR +E+    L  +++L+
Sbjct: 181 IRKSGEEVTRELRRSETEKCRKVENMDGELVPEDELS 206

[Close]

BLAST of Cp4.1LG14g01730 vs. NCBI nr
Match: gi|823192009|ref|XP_012491635.1| (PREDICTED: uncharacterized protein LOC105803782 [Gossypium raimondii])

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-22
Identity = 87/219 (39.73%), Postives = 119/219 (54.34%), Query Frame = 1


Query: 1   MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRFIEFCFLLVFLSWTFSRLPIAVRISSEY 60
           MD F+F   K EKV + + + N L+  AK FR  E    L+FL+WT  R+P AV+IS E+
Sbjct: 1   MDSFYFHNVKTEKVKA-MRKYNRLRSIAKVFRIFEVLSALLFLAWTAERVPFAVKISGEF 60

Query: 61  FGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGYSAETERIYENLIEKSGSRDLPDSLA 120
             KL G IASP F FL+CN II+ L+AK   FS       ++ E +I+           A
Sbjct: 61  VLKLGGIIASPFFVFLICNVIIITLIAKSGIFSAVRNADSKVCEEIIKT----------A 120

Query: 121 ERDSSIAEEVEIVYQDKQIIVE--------------------SESVVDHPKVILRSLSEK 180
           +  S    + EIVYQDK+II E                    S+   D+P+V  RS SEK
Sbjct: 121 DTHSKSVSQEEIVYQDKEIISEVNTSTRECEDMEPEPEPESDSDFEADNPRVYRRSKSEK 180

Query: 181 LTRECVTTQSEKLRRSETE-KCRNLEHSHDILFFQEDLN 197
           L RE V    ++LRRSE+E KCR +E+  + LF ++DL+
Sbjct: 181 LEREKV---KKELRRSESEKKCRKIENMDEKLFPEDDLS 205

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g01730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG14g01730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY10_CUCSA	8.7e-59	63.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046600 PE=4 SV=1	[more]
A0A0D2T1L0_GOSRA	7.7e-23	40.09	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G066400 PE=4 SV=1	[more]
A0A0D2SGW9_GOSRA	1.7e-22	39.73	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G201500 PE=4 SV=1	[more]
A0A0D2T5U0_GOSRA	5.0e-22	39.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G100900 PE=4 SV=1	[more]
A0A067LJV9_JATCU	2.5e-21	40.36	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22166 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g01730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66440.1	2.4e-15	33.61	unknown protein	[more]

BLAST of Cp4.1LG14g01730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102374\|ref\|XP_008452094.1\|	3.9e-60	63.55	PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo]	[more]
gi\|778690713\|ref\|XP_011653156.1\|	1.2e-58	63.47	PREDICTED: uncharacterized protein LOC105435182 [Cucumis sativus]	[more]
gi\|1009144810\|ref\|XP_015890003.1\|	1.9e-27	46.45	PREDICTED: uncharacterized protein LOC107424669 [Ziziphus jujuba]	[more]
gi\|823205694\|ref\|XP_012436865.1\|	1.1e-22	40.09	PREDICTED: uncharacterized protein LOC105763265 [Gossypium raimondii]	[more]
gi\|823192009\|ref\|XP_012491635.1\|	2.5e-22	39.73	PREDICTED: uncharacterized protein LOC105803782 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g01730.1	Cp4.1LG14g01730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640	FAMILY NOT NAMED	coord: 2..187 score: 3.0
None	No IPR available	PANTHER	PTHR33640:SF1	SUBFAMILY NOT NAMED	coord: 2..187 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g01730	Cucsa.106440	Cucumber (Gy14) v1	cgycpeB0237
Cp4.1LG14g01730	CmaCh16G006280	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g01730	CmaCh04G007620	Cucurbita maxima (Rimu)	cmacpeB714
Cp4.1LG14g01730	CmoCh04G008110	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g01730	CmoCh16G006840	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g01730	Cla014578	Watermelon (97103) v1	cpewmB218
Cp4.1LG14g01730	Cla014230	Watermelon (97103) v1	cpewmB232
Cp4.1LG14g01730	Csa4G046600	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g01730	MELO3C016396	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g01730	ClCG07G008620	Watermelon (Charleston Gray)	cpewcgB210
Cp4.1LG14g01730	CSPI06G31180	Wild cucumber (PI 183967)	cpecpiB231
Cp4.1LG14g01730	CSPI04G05380	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g01730	Lsi07G002470	Bottle gourd (USVL1VR-Ls)	cpelsiB185
Cp4.1LG14g01730	MELO3C016396.2	Melon (DHL92) v3.6.1	cpemedB238
Cp4.1LG14g01730	MELO3C007844.2	Melon (DHL92) v3.6.1	cpemedB248
Cp4.1LG14g01730	CsaV3_6G046480	Cucumber (Chinese Long) v3	cpecucB0280
Cp4.1LG14g01730	CsaV3_4G005530	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g01730	Bhi01G001859	Wax gourd	cpewgoB0289
Cp4.1LG14g01730	CsGy4G005280	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g01730	Carg05749	Silver-seed gourd	carcpeB1414
Cp4.1LG14g01730	Carg14159	Silver-seed gourd	carcpeB1301
Cp4.1LG14g01730	Carg00627	Silver-seed gourd	carcpeB0558

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g01730	Cp4.1LG10g00630	Cucurbita pepo (Zucchini)	cpecpeB065
Cp4.1LG14g01730	Cp4.1LG01g06930	Cucurbita pepo (Zucchini)	cpecpeB237

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g01730	Bottle gourd (USVL1VR-Ls)	cpelsiB166
Cp4.1LG14g01730	Melon (DHL92) v3.5.1	cpemeB207
Cp4.1LG14g01730	Cucumber (Gy14) v2	cgybcpeB745
Cp4.1LG14g01730	Cucurbita pepo (Zucchini)	cpecpeB064
Cp4.1LG14g01730	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG14g01730	Cucurbita pepo (Zucchini)	cpecpeB239