Cp4.1LG13g10470 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g10470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	NifU-like protein 5, mitochondrial
Location	Cp4.1LG13 : 6859367 .. 6862627 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATTTGCAAGAACCGCGAGGGAAAAATGAGGGGCTTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTTCAACACTGGGTTCTCATGGAGGTGGGAAGATTCGATTCTTCTCAGCCGCAACAACTTCTTCTATATTCGGCGGAAAAGAAGCTGTTTCGTGTTATGTATCGTCAAGAACTTGCTCCGATCCTTTCTTGCGTTCATGGAGATGGAGTCAATTTGGAGGTGCGTGAGCTTTGACGAACCATCATTGGAATCAGCTGTGTTTGTTTTTGAATAATCTGTCGTATTTTGTTGCATTCAGGACAAAAAAGAACAATGTTCATTGAAACTCAGTCAACACCGAATCCTTCATCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTTGGAAGTGCTGATTTTCCTAATGCGCGCTCTGCTATGAACTCCCCACTAGCAAAGGCTCTTTATGGTGTTGATGGTACATATTTTGAACTTATGATATCCTTTTAGATTTCTGTTGGATTTTCAATTTGGAATACCCGCTTCCTTTTATCTGAATTTTAAGGAGTTTAAGATGTATGCTTGCATTTTTGAGGTCTGGAATTATATCGACATTGAACTGAGACATGGAATATTATTATTAATCAGTTTATAGCCAGCTGAGCGTAGGAAAGTTGTGAGGCATAGTAAATAAGTGCTAGTTTGAAGTTTCATTGATATATGACTTGGTGTTGGTTTACAAGTGTTCTTACTGGTTTTACTGATTTCTGGCGTGGGGCATTCTTGATTGCTTGTGCAGGTGTTATCCGAGTCTTCTTTGGATCGGATTTTGTTACTGTTACAAAGTCAAATGAGGCTTCGTGGGATTTCCTTAAGCCTGAAATTTTTGCTTCAATCATGGACTTCTATTCTTCTGGACAACCACTGTTTCTAGACGCTAATACTGCCGCTGCCATGGACACAGCCATCAACGAAGTACGTCTTCTAACTGCAAATTAATCCACTTTCTTGTTAGAGTCTTACTCGTTAAAAAACAAGTTAATTTTTTAGATCACATGGTGTTCTCTTCTCGTCGAACTTCTACATATTAATTAGAAATAAGAAAGTTGAACGGTTATTTACGTTTTTTTCTCTTGGGATATTTATGATAATTTTATATTGGGTTATGTTTTGATTGCAAATTATGCAGTTCTATATGGTTCTCTTTCTCTCTTTCGATACTCGACATGATATAATACTAGGTCAAATGTGAGTTCCTTGGTGAAATGAAATCACACTAATTGATATACATAGATTTTGTGTTCCTTGGGTACTAATATAGAACTATGAACATTTAATGTCATCATACTAAAGATTAAAAGTACTTGAGGCTCATGGTATTAATAGAGTAATGTGGTGCCTTGCAGTTCCATTTCTACTTTTTTGGATACAACTTTGGCTAAGAACTTGTTTTCTGATCTTCATATTGGTCATTTTGATGGACATTCGATTTTCTCTTAAGTCAAATTAGTTACATTTTTTCTGTCCTGTCGTTAAGAAACGGGTTTTTCCTTTAATATAAAGTGAGGGATATACAAGCTACTGTGCCACTTGTGGAGACCTGAGAATTGGAAAGGAATTACACAAAGATACTGTAATTGTACTTTTTGTTTTCAATCACTGAAGTTCTCTTGTTAGTTGTTATTAAAATTAGTATGTCTACTTAAAGAAGTTGAGTTATGTAACGTCCCCAAGCCCACCGCTAGTAGATATTGTCCTTTTTTGGTTTTCCCTTTCGGGTTTTCCCTCAAAGTTTTTAAAACTCGTCTGCTAGGGAGAGGTTTCCACACCCTTAAGGGTGTTTCGTTTTCTCCTCCAACCGAGGTGGGATCTTACAAGCTACTTACCTAAAAGATGAGTATGTCGATGTCTTTTTATTATGTGTCAAAATTTATTTGTAATATTTCAATTTGAGGTTTGACTTTGTGGTCGTTGTTTTCTGTGCTGCAAGTATTGAATCTTTCAAAGTTATATCTGTCATGTTGGAATCTGAAACATCATCAATTTTTATTATTCTAGTAGTTGGAAACAGCTTGATTCTTAATAGATCTGTCCACTTGTGCCTTTATTTAGGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTTGAGACTCGTATTCGACCGACAGTGCAAGATGATGGTGGAGATATTGAATACAGGGGATATAATGAGTAGGTTTTTCAGTTACAGACGTTCCGTAAAGCATTAGGAGTTGTATGCATGATTGCTTTTATATGGTTATATATTGAATTTTCCATTTCTATCTTCTTCAGAGAAACTGGAATTGTCAAATTGAGAATGCAGGGAGCATGCAGTGGCTGCCCAAGCTCATCCGTCACTCTAAAATCTGGCATTGAAAATATGTTGATGCATTATGTACCAGAGGTGAGAGTTATGTGATCTTTTTATTTGTAAGCTCATGTTCAATGAGAAGCATATCCAATATTCCACTTGGACATCTAGGTAGGTCCTCCATGCATATTTCTTTTGTTCCCTTCTTTTACATGATACCCGACCCGAGGTGTCCTACAGGCATATTTCTTAATTTAGTTCATGATGGAAGTATTGAGCTTCAATACACATACACTGACACCACCAGCTGGAATGAAGGACTTTTTGTTTCTTTTTAAATAAGAGGAATGGCAGGACATTGCACTATATAATTGAGATTGAATCTAAGTTTTATGACTAAGAACAGTTGGTTTTCCAACTTCTCACTGAAACTTGCTATATGCTCGATACTGGCTAGCTACTGTTCATGTTTTACTGAAAATAATCATATGAAATGCAACATGCTCGATGGATAACAAGAATGCATCGACGAACACCGCATGTTTGATAAGACGAAAGACAATGTACCCTAGAGAGCCAACGTAGAGAATCACTTTAAATGGAGAAAATTGAAATAGAATAATGTTACACAGCTGCTTAGTTCTAGTATATAGGTTCTTTCTTCCTCTTTTGTTTCTATGCTTCTCAGATCCATAAACATCTTTTTTTCTTTTTTTGGAATATCTATGATTTGAATGTCTATTCTCAATTTTTAGGTGAAGGGCGTGGAACAAGAATTTGACGTCGAGGAAGAGGATGTAAAGTCAACCAGCCAGATGGAGTAAAAGATGAGTTGGTCTATTTATTCTATGTTATGTTGAGCCACAACACTGATCTTGAGGGTGAGCCCTTACGAGTTGGTTGTTTCATTCTTTGTTAGATTGAACTGCAACACT

mRNA sequence

TCAATTTGCAAGAACCGCGAGGGAAAAATGAGGGGCTTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTTCAACACTGGGTTCTCATGGAGGTGGGAAGATTCGATTCTTCTCAGCCGCAACAACTTCTTCTATATTCGGCGGAAAAGAAGCTGTTTCGTGTTATGTATCGTCAAGAACTTGCTCCGATCCTTTCTTGCGTTCATGGAGATGGAGTCAATTTGGAGGACAAAAAAGAACAATGTTCATTGAAACTCAGTCAACACCGAATCCTTCATCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTTGGAAGTGCTGATTTTCCTAATGCGCGCTCTGCTATGAACTCCCCACTAGCAAAGGCTCTTTATGGTGTTGATGGTGTTATCCGAGTCTTCTTTGGATCGGATTTTGTTACTGTTACAAAGTCAAATGAGGCTTCGTGGGATTTCCTTAAGCCTGAAATTTTTGCTTCAATCATGGACTTCTATTCTTCTGGACAACCACTGTTTCTAGACGCTAATACTGCCGCTGCCATGGACACAGCCATCAACGAAGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTTGAGACTCGTATTCGACCGACAGTGCAAGATGATGGTGGAGATATTGAATACAGGGGATATAATGAAGAAACTGGAATTGTCAAATTGAGAATGCAGGGAGCATGCAGTGGCTGCCCAAGCTCATCCGTCACTCTAAAATCTGGCATTGAAAATATGTTGATGCATTATGTACCAGAGGTGAAGGGCGTGGAACAAGAATTTGACGTCGAGGAAGAGGATGTAAAGTCAACCAGCCAGATGGAGTAAAAGATGAGTTGGTCTATTTATTCTATGTTATGTTGAGCCACAACACTGATCTTGAGGGTGAGCCCTTACGAGTTGGTTGTTTCATTCTTTGTTAGATTGAACTGCAACACT

Coding sequence (CDS)

ATGAGGGGCTTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTTCAACACTGGGTTCTCATGGAGGTGGGAAGATTCGATTCTTCTCAGCCGCAACAACTTCTTCTATATTCGGCGGAAAAGAAGCTGTTTCGTGTTATGTATCGTCAAGAACTTGCTCCGATCCTTTCTTGCGTTCATGGAGATGGAGTCAATTTGGAGGACAAAAAAGAACAATGTTCATTGAAACTCAGTCAACACCGAATCCTTCATCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTTGGAAGTGCTGATTTTCCTAATGCGCGCTCTGCTATGAACTCCCCACTAGCAAAGGCTCTTTATGGTGTTGATGGTGTTATCCGAGTCTTCTTTGGATCGGATTTTGTTACTGTTACAAAGTCAAATGAGGCTTCGTGGGATTTCCTTAAGCCTGAAATTTTTGCTTCAATCATGGACTTCTATTCTTCTGGACAACCACTGTTTCTAGACGCTAATACTGCCGCTGCCATGGACACAGCCATCAACGAAGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTTGAGACTCGTATTCGACCGACAGTGCAAGATGATGGTGGAGATATTGAATACAGGGGATATAATGAAGAAACTGGAATTGTCAAATTGAGAATGCAGGGAGCATGCAGTGGCTGCCCAAGCTCATCCGTCACTCTAAAATCTGGCATTGAAAATATGTTGATGCATTATGTACCAGAGGTGAAGGGCGTGGAACAAGAATTTGACGTCGAGGAAGAGGATGTAAAGTCAACCAGCCAGATGGAGTAA

Protein sequence

MRGLGSLIVRARRISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSDPFLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME

Homology

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BLAST of Cp4.1LG13g10470 vs. Swiss-Prot
Match: NIFU4_ARATH (NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.9e-96
Identity = 186/276 (67.39%), Postives = 217/276 (78.62%), Query Frame = 1


Query: 11  ARRISTLGSHGGGKIRFFSAATTSSIFGGK--EAVSCYVS------SRTCSDPF------ 70
           AR +++L   GG K+   ++  TSS          S ++S      SRT           
Sbjct: 5   ARLVTSLSRIGGRKVVSGTSTVTSSSSSSLLLSRRSLFISATNLLNSRTKDSALPSLNSS 64

Query: 71  LRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKAL 130
           L + +W+  GGQ+RTMFI+TQSTPNPSSLMFYPGKPVMEVGSADFPN RSA+ SPLAK++
Sbjct: 65  LLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSI 124

Query: 131 YGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTA 190
           Y +DGV+RVFFGSDFVTVTKS++ SWD LKPEIFA++MDFYSSGQPLFLD+  AAA DTA
Sbjct: 125 YSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTA 184

Query: 191 INEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVT 250
           I+EDDSETVAMIKELLETRIRP VQDDGGDIEY G++ E+GIVKLRMQGACSGCPSSSVT
Sbjct: 185 ISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVT 244

Query: 251 LKSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQM 273
           LKSGIENMLMHYV EVKGVEQEFD E+E+   + +M
Sbjct: 245 LKSGIENMLMHYVSEVKGVEQEFDGEDEEGTLSGEM 280

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BLAST of Cp4.1LG13g10470 vs. Swiss-Prot
Match: NIFU5_ARATH (NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.4e-93
Identity = 176/242 (72.73%), Postives = 203/242 (83.88%), Query Frame = 1


Query: 27  FFSAATTSSIFGGKEAVSCYVSSRTCSDPFLRSWRWSQFGGQKRTMFIETQSTPNPSSLM 86
           F SAAT   +    E+++   +SR CS      + W +   Q+RTMFI+TQSTPNPSSLM
Sbjct: 35  FISAATHFPV-NFSESITTN-ASRNCSRSSSFPFNWIE---QRRTMFIQTQSTPNPSSLM 94

Query: 87  FYPGKPVMEVGSADFPNARSAMNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLK 146
           F PGKPVME+GSADFPN+RSAM+SPLAKA++ +DGV+RVF+GSDFVTVTKS++ +WD LK
Sbjct: 95  FSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDDVTWDILK 154

Query: 147 PEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGD 206
           P+IFA +MDFYSSGQPLFLD+   AA DTAI+EDDSETVAMIKELLETRIRP+VQDDGGD
Sbjct: 155 PDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGD 214

Query: 207 IEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEEDV 266
           IEY G++ ETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYV EVKGVEQEFD EEE  
Sbjct: 215 IEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEEEGT 271

Query: 267 KS 269
            S
Sbjct: 275 SS 271

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BLAST of Cp4.1LG13g10470 vs. Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.9e-61
Identity = 120/201 (59.70%), Postives = 150/201 (74.63%), Query Frame = 1


Query: 69  KRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLAKALYGVDGVIRVFF 128
           +R+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A NSPLAK L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFF 123

Query: 129 GSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAM 188
           G+DFVT++K   A W  +KPE+FA IMDF++SG P+  DA   A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 183

Query: 189 IKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 248
           IKELL+TRIRPTVQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 249 YVPEVKGVEQEFDVEEEDVKS 269
           Y+PEV+ VEQ FD  +  ++S
Sbjct: 244 YIPEVESVEQVFDEADRMIES 260

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BLAST of Cp4.1LG13g10470 vs. Swiss-Prot
Match: NFU1_MOUSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus musculus GN=Nfu1 PE=1 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 1.0e-60
Identity = 117/202 (57.92%), Postives = 151/202 (74.75%), Query Frame = 1


Query: 70  RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVDGVIRVFFGS 129
           R MFI+TQ TPNP+SL F PGKPV+E  + DFP   +A  SPLA+ L+ ++GV  VFFG 
Sbjct: 55  RFMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGP 114

Query: 130 DFVTVTKSN-EASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAMI 189
           DF+TVTK N E  W+ LKP+I+A+IMDF++SG PL  +  T      A +E+D E VAMI
Sbjct: 115 DFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE-ETPPPPGEAGSEEDDEVVAMI 174

Query: 190 KELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHY 249
           KELL+TRIRPTVQ+DGGD+ YRG+  E GIV+L++QG+C+ CPSS +TLKSGI+NML  Y
Sbjct: 175 KELLDTRIRPTVQEDGGDVIYRGF--EDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFY 234

Query: 250 VPEVKGVEQEFDVEEEDVKSTS 271
           +PEV+GVEQ  D +E D K  +
Sbjct: 235 IPEVEGVEQVMDDDESDEKEAN 253

[Close]

BLAST of Cp4.1LG13g10470 vs. Swiss-Prot
Match: NFU1_DROER (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta GN=GG17526 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.2e-60
Identity = 119/201 (59.20%), Postives = 149/201 (74.13%), Query Frame = 1


Query: 69  KRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLAKALYGVDGVIRVFF 128
           +R+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A +SPLAK L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123

Query: 129 GSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAM 188
           G+DFVT++K   A W  +KPE+FA IMDF++SG P+  DA   A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMM 183

Query: 189 IKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 248
           IKELL+TRIRPTVQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 249 YVPEVKGVEQEFDVEEEDVKS 269
           Y+PEV+ VEQ FD  +  + S
Sbjct: 244 YIPEVESVEQVFDEADRMIDS 260

[Close]

BLAST of Cp4.1LG13g10470 vs. TrEMBL
Match: A0A0A0KE63_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045100 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 8.1e-134
Identity = 243/273 (89.01%), Postives = 255/273 (93.41%), Query Frame = 1


Query: 1   MRGLGSLIVRARRISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSDPFLRSW 60
           M+GLG LI+RARRI +LG HGGG  RFFSAATTSS+FGG+E  SC +SS  CSD  LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTRFFSAATTSSMFGGEEPASCSISSTICSDSSLRSW 60

Query: 61  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120
           +  QFGGQ+RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD
Sbjct: 61  KSIQFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120

Query: 121 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 180
           GV+RVFFGSDFVTVTKSN+ASWDFLKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAI ED
Sbjct: 121 GVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKED 180

Query: 181 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 240
           DSETVAMIKELLETRIRP VQDDGGDIEYRGYNEETGIV LRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKSG 240

Query: 241 IENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           IENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME
Sbjct: 241 IENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 273

[Close]

BLAST of Cp4.1LG13g10470 vs. TrEMBL
Match: F6HVQ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00620 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.3e-104
Identity = 198/276 (71.74%), Postives = 231/276 (83.70%), Query Frame = 1


Query: 1   MRGLGSLIVR---ARRISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSDPFL 60
           M+GLG LI R    +R+         +   FS+ TT+S      + S + S ++ S P  
Sbjct: 1   MKGLGRLIGRRLLCKRLEPWRKPLMPRRLIFSSFTTTSYLENPTSSSRFTSFKSSSLP-- 60

Query: 61  RSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALY 120
              +WS FGGQ+RTMFI+TQSTPNP+SLMFYPGKPVMEVGSADFPN+RSAM+SPLAK+LY
Sbjct: 61  ---KWSHFGGQRRTMFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLY 120

Query: 121 GVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAI 180
           G+DG+ RVFFGSDF+TVTKS++ASWDF+KPEIFA+IMDFYSSG+PLFLD+NTAAAMDTAI
Sbjct: 121 GIDGITRVFFGSDFITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTAAAMDTAI 180

Query: 181 NEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTL 240
           +EDDSETVAMIKELLETRIRP VQDDGGDIEYRG++ ETGIVKL+MQGACSGCPSSSVTL
Sbjct: 181 HEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTL 240

Query: 241 KSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           KSGIENMLMHYVPEVKGVEQE D E+EDV  + QM+
Sbjct: 241 KSGIENMLMHYVPEVKGVEQELDAEDEDVALSGQMD 271

[Close]

BLAST of Cp4.1LG13g10470 vs. TrEMBL
Match: W9QGE4_9ROSA (NifU-like protein 4 OS=Morus notabilis GN=L484_018328 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.5e-100
Identity = 199/289 (68.86%), Postives = 221/289 (76.47%), Query Frame = 1


Query: 1   MRGLGSLIVRA-----RRISTLGSHGGGKIRFF-----------SAATTSSIFGGKEAVS 60
           M+G G L+ R      R I T  +     IRFF           S+ T+      +   +
Sbjct: 1   MKGFGRLVWRGFSQQTRIIETQPNRNNNNIRFFISRRGFIHASSSSPTSFHHQFDRTPFA 60

Query: 61  CYVSSRTCSDPFLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNA 120
            + SS     PF +   W    GQ+R+MFIETQSTPNPSSLMFYPGKPVMEVGSADFPNA
Sbjct: 61  SFKSSPVSPSPFQK---WGFLAGQRRSMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNA 120

Query: 121 RSAMNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLF 180
           RSAM+SPLAKALYG+DG+ RVFFGSDFVTVTKS EASWDFLKPEIFA+IMDFYSSGQPLF
Sbjct: 121 RSAMSSPLAKALYGIDGITRVFFGSDFVTVTKSEEASWDFLKPEIFAAIMDFYSSGQPLF 180

Query: 181 LDANTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQ 240
           LD+ TAAA DTAI+EDDSE VAMIKELLETRIRP VQDDGGDIEYRG++ ETG+VKLRMQ
Sbjct: 181 LDSETAAAKDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGVVKLRMQ 240

Query: 241 GACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           GACSGCPSSSVTLKSGIENMLMHYVPEVK VE+E D E+ED   T QME
Sbjct: 241 GACSGCPSSSVTLKSGIENMLMHYVPEVKSVEEELDAEDEDAALTGQME 286

[Close]

BLAST of Cp4.1LG13g10470 vs. TrEMBL
Match: A0A061FWK2_THECC (NFU domain protein 4 isoform 1 OS=Theobroma cacao GN=TCM_043933 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 5.9e-100
Identity = 198/280 (70.71%), Postives = 225/280 (80.36%), Query Frame = 1


Query: 1   MRGLGSLIVRAR-RISTLG-----SHGGGKIRFFSAATTSS-IFGGKEAVSCYVSSRTCS 60
           MRG+G L+ R+     T G     SH   +   FS++ TSS +  G ++     +S T  
Sbjct: 1   MRGVGRLVRRSLDHCRTCGGSLFPSHLVSRRLLFSSSRTSSWLVIGSQSSILSSNSETLP 60

Query: 61  DPFLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA 120
              L   + + F GQ+R MFI+TQSTPNPSSLMFYPGK VMEVGSADFPNARSAMNSPLA
Sbjct: 61  SSSLLPRKGTPFTGQRRNMFIQTQSTPNPSSLMFYPGKAVMEVGSADFPNARSAMNSPLA 120

Query: 121 KALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAM 180
           KALYG+DG+ RVFFGSDFVTVTKS++ASWD LKPEIFA+IMDFYSSGQPLFLD+ TAAAM
Sbjct: 121 KALYGIDGIARVFFGSDFVTVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSKTAAAM 180

Query: 181 DTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSS 240
           DTAI+EDDSETVAMIKELLETRIRP VQDDGGD+EYRG++ +TGIVKL+MQGACSGCPSS
Sbjct: 181 DTAIHEDDSETVAMIKELLETRIRPAVQDDGGDVEYRGFDLDTGIVKLKMQGACSGCPSS 240

Query: 241 SVTLKSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           SVTLKSGIENMLMHYVPEVKGVEQE D E+ED     QME
Sbjct: 241 SVTLKSGIENMLMHYVPEVKGVEQELDAEDEDTTLAGQME 280

[Close]

BLAST of Cp4.1LG13g10470 vs. TrEMBL
Match: A0A0B0NQK8_GOSAR (NifU-like protein 4, mitochondrial OS=Gossypium arboreum GN=F383_18866 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.8e-99
Identity = 194/271 (71.59%), Postives = 222/271 (81.92%), Query Frame = 1


Query: 1   MRGLGSLIVRAR------RISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSD 60
           M+G+G LI RA       R          ++ F S+ T S +  G    S  +SS + S 
Sbjct: 1   MKGVGRLISRAVSHRQTCRSVAPSELISRRLMFSSSRTPSLLAVGNP--SSVLSSNSESL 60

Query: 61  PFLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAK 120
             L S +W+ F GQ+R+MFI+TQSTPNPSSLMFYPGK VMEVGSADFPNARSAM SPLAK
Sbjct: 61  ASLPSLKWNHFIGQRRSMFIQTQSTPNPSSLMFYPGKAVMEVGSADFPNARSAMTSPLAK 120

Query: 121 ALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMD 180
           ALYG+DG+ RVFFGSDF+TVTKS++ASWD LKPEIFA+IMDFYSSGQPLFLD+ TA++MD
Sbjct: 121 ALYGIDGITRVFFGSDFITVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSKTASSMD 180

Query: 181 TAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSS 240
           TAI+EDDSETVAMIKELLETRIRP VQDDGGDIEYRG++ +TGIVKL+MQGACSGCPSSS
Sbjct: 181 TAIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPDTGIVKLKMQGACSGCPSSS 240

Query: 241 VTLKSGIENMLMHYVPEVKGVEQEFDVEEED 266
           VTLKSGIENMLMHYVPEVKGVEQEFD E+ED
Sbjct: 241 VTLKSGIENMLMHYVPEVKGVEQEFDAEDED 269

[Close]

BLAST of Cp4.1LG13g10470 vs. TAIR10
Match: AT3G20970.1 (AT3G20970.1 NFU domain protein 4)

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-97
Identity = 186/276 (67.39%), Postives = 217/276 (78.62%), Query Frame = 1


Query: 11  ARRISTLGSHGGGKIRFFSAATTSSIFGGK--EAVSCYVS------SRTCSDPF------ 70
           AR +++L   GG K+   ++  TSS          S ++S      SRT           
Sbjct: 5   ARLVTSLSRIGGRKVVSGTSTVTSSSSSSLLLSRRSLFISATNLLNSRTKDSALPSLNSS 64

Query: 71  LRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKAL 130
           L + +W+  GGQ+RTMFI+TQSTPNPSSLMFYPGKPVMEVGSADFPN RSA+ SPLAK++
Sbjct: 65  LLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSI 124

Query: 131 YGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTA 190
           Y +DGV+RVFFGSDFVTVTKS++ SWD LKPEIFA++MDFYSSGQPLFLD+  AAA DTA
Sbjct: 125 YSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTA 184

Query: 191 INEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVT 250
           I+EDDSETVAMIKELLETRIRP VQDDGGDIEY G++ E+GIVKLRMQGACSGCPSSSVT
Sbjct: 185 ISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVT 244

Query: 251 LKSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQM 273
           LKSGIENMLMHYV EVKGVEQEFD E+E+   + +M
Sbjct: 245 LKSGIENMLMHYVSEVKGVEQEFDGEDEEGTLSGEM 280

[Close]

BLAST of Cp4.1LG13g10470 vs. TAIR10
Match: AT1G51390.1 (AT1G51390.1 NFU domain protein 5)

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-94
Identity = 176/242 (72.73%), Postives = 203/242 (83.88%), Query Frame = 1


Query: 27  FFSAATTSSIFGGKEAVSCYVSSRTCSDPFLRSWRWSQFGGQKRTMFIETQSTPNPSSLM 86
           F SAAT   +    E+++   +SR CS      + W +   Q+RTMFI+TQSTPNPSSLM
Sbjct: 35  FISAATHFPV-NFSESITTN-ASRNCSRSSSFPFNWIE---QRRTMFIQTQSTPNPSSLM 94

Query: 87  FYPGKPVMEVGSADFPNARSAMNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLK 146
           F PGKPVME+GSADFPN+RSAM+SPLAKA++ +DGV+RVF+GSDFVTVTKS++ +WD LK
Sbjct: 95  FSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDDVTWDILK 154

Query: 147 PEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGD 206
           P+IFA +MDFYSSGQPLFLD+   AA DTAI+EDDSETVAMIKELLETRIRP+VQDDGGD
Sbjct: 155 PDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGD 214

Query: 207 IEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEEDV 266
           IEY G++ ETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYV EVKGVEQEFD EEE  
Sbjct: 215 IEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEEEGT 271

Query: 267 KS 269
            S
Sbjct: 275 SS 271

[Close]

BLAST of Cp4.1LG13g10470 vs. TAIR10
Match: AT4G25910.1 (AT4G25910.1 NFU domain protein 3)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1


Query: 196 IRPTVQDDGGDIEYRGYNEETG-IVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKG 255
           +RP++  DGG++     +E  G +V L++QGAC  CPSSS+TLK GIE+ L   +PE+  
Sbjct: 96  VRPSLMADGGNV---ALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMS 155

Query: 256 VEQEFDVE 263
           VEQ  + E
Sbjct: 156 VEQFLESE 160

[Close]

BLAST of Cp4.1LG13g10470 vs. TAIR10
Match: AT5G49940.1 (AT5G49940.1 NIFU-like protein 2)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 157 YSSGQPLFLDANTAAAMDTAINEDDSETVAMIKELLET---RIRPTVQDDGGDIEYRGYN 216
           + S + LF  +    A+ T    D    V + +E +E+    IRP +  DGG++    + 
Sbjct: 58  FLSSRQLFRRSKVVKAVATP---DPILEVPLTEENVESVLDEIRPYLMSDGGNVAL--HE 117

Query: 217 EETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVE 263
            +  IV++++QGAC  CPSS++T+K GIE  LM  +PE+  VE   D E
Sbjct: 118 IDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEE 161

[Close]

BLAST of Cp4.1LG13g10470 vs. TAIR10
Match: AT4G01940.1 (AT4G01940.1 NFU domain protein 1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 1


Query: 190 ELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH-Y 249
           +L+   +RP +  DGG+++    + E G+V L++QGAC+ CPSSS T+  GIE +L   +
Sbjct: 91  DLVLEDVRPFLISDGGNVDV--VSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKF 150

Query: 250 VPEVKGVEQEFDVEEEDV 267
              +K + Q FD E + +
Sbjct: 151 GDALKDIRQVFDEEVKQI 166

[Close]

BLAST of Cp4.1LG13g10470 vs. NCBI nr
Match: gi|449446277|ref|XP_004140898.1| (PREDICTED: nifU-like protein 4, mitochondrial [Cucumis sativus])

HSP 1 Score: 484.6 bits (1246), Expect = 1.2e-133
Identity = 243/273 (89.01%), Postives = 255/273 (93.41%), Query Frame = 1


Query: 1   MRGLGSLIVRARRISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSDPFLRSW 60
           M+GLG LI+RARRI +LG HGGG  RFFSAATTSS+FGG+E  SC +SS  CSD  LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTRFFSAATTSSMFGGEEPASCSISSTICSDSSLRSW 60

Query: 61  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120
           +  QFGGQ+RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD
Sbjct: 61  KSIQFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120

Query: 121 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 180
           GV+RVFFGSDFVTVTKSN+ASWDFLKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAI ED
Sbjct: 121 GVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKED 180

Query: 181 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 240
           DSETVAMIKELLETRIRP VQDDGGDIEYRGYNEETGIV LRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKSG 240

Query: 241 IENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           IENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME
Sbjct: 241 IENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 273

[Close]

BLAST of Cp4.1LG13g10470 vs. NCBI nr
Match: gi|659113477|ref|XP_008456595.1| (PREDICTED: nifU-like protein 4, mitochondrial [Cucumis melo])

HSP 1 Score: 481.5 bits (1238), Expect = 9.8e-133
Identity = 241/273 (88.28%), Postives = 255/273 (93.41%), Query Frame = 1


Query: 1   MRGLGSLIVRARRISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSDPFLRSW 60
           M+GLG LI+RARRI +LG HGGG  RFFSAATTSS+FGG+   SC +SSR CSD  LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTRFFSAATTSSMFGGEGPASCSISSRICSDSSLRSW 60

Query: 61  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120
           +  +FGGQ+RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD
Sbjct: 61  KSIKFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120

Query: 121 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 180
           GV+RVFFGSDFVTVTKSN+ASWDFLKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAI ED
Sbjct: 121 GVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKED 180

Query: 181 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 240
           DSETVAMIKELLETRIRP VQDDGGDIEYRGYNEETGIV LRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKSG 240

Query: 241 IENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           IENMLMHYVPEVKGVEQEFD+EEEDVKSTSQME
Sbjct: 241 IENMLMHYVPEVKGVEQEFDLEEEDVKSTSQME 273

[Close]

BLAST of Cp4.1LG13g10470 vs. NCBI nr
Match: gi|225464130|ref|XP_002264979.1| (PREDICTED: nifU-like protein 4, mitochondrial [Vitis vinifera])

HSP 1 Score: 386.7 bits (992), Expect = 3.3e-104
Identity = 198/276 (71.74%), Postives = 231/276 (83.70%), Query Frame = 1


Query: 1   MRGLGSLIVR---ARRISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSDPFL 60
           M+GLG LI R    +R+         +   FS+ TT+S      + S + S ++ S P  
Sbjct: 1   MKGLGRLIGRRLLCKRLEPWRKPLMPRRLIFSSFTTTSYLENPTSSSRFTSFKSSSLP-- 60

Query: 61  RSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALY 120
              +WS FGGQ+RTMFI+TQSTPNP+SLMFYPGKPVMEVGSADFPN+RSAM+SPLAK+LY
Sbjct: 61  ---KWSHFGGQRRTMFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLY 120

Query: 121 GVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAI 180
           G+DG+ RVFFGSDF+TVTKS++ASWDF+KPEIFA+IMDFYSSG+PLFLD+NTAAAMDTAI
Sbjct: 121 GIDGITRVFFGSDFITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTAAAMDTAI 180

Query: 181 NEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTL 240
           +EDDSETVAMIKELLETRIRP VQDDGGDIEYRG++ ETGIVKL+MQGACSGCPSSSVTL
Sbjct: 181 HEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTL 240

Query: 241 KSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           KSGIENMLMHYVPEVKGVEQE D E+EDV  + QM+
Sbjct: 241 KSGIENMLMHYVPEVKGVEQELDAEDEDVALSGQMD 271

[Close]

BLAST of Cp4.1LG13g10470 vs. NCBI nr
Match: gi|703070370|ref|XP_010088769.1| (NifU-like protein 4 [Morus notabilis])

HSP 1 Score: 374.0 bits (959), Expect = 2.2e-100
Identity = 199/289 (68.86%), Postives = 221/289 (76.47%), Query Frame = 1


Query: 1   MRGLGSLIVRA-----RRISTLGSHGGGKIRFF-----------SAATTSSIFGGKEAVS 60
           M+G G L+ R      R I T  +     IRFF           S+ T+      +   +
Sbjct: 1   MKGFGRLVWRGFSQQTRIIETQPNRNNNNIRFFISRRGFIHASSSSPTSFHHQFDRTPFA 60

Query: 61  CYVSSRTCSDPFLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNA 120
            + SS     PF +   W    GQ+R+MFIETQSTPNPSSLMFYPGKPVMEVGSADFPNA
Sbjct: 61  SFKSSPVSPSPFQK---WGFLAGQRRSMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNA 120

Query: 121 RSAMNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLF 180
           RSAM+SPLAKALYG+DG+ RVFFGSDFVTVTKS EASWDFLKPEIFA+IMDFYSSGQPLF
Sbjct: 121 RSAMSSPLAKALYGIDGITRVFFGSDFVTVTKSEEASWDFLKPEIFAAIMDFYSSGQPLF 180

Query: 181 LDANTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQ 240
           LD+ TAAA DTAI+EDDSE VAMIKELLETRIRP VQDDGGDIEYRG++ ETG+VKLRMQ
Sbjct: 181 LDSETAAAKDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGVVKLRMQ 240

Query: 241 GACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 274
           GACSGCPSSSVTLKSGIENMLMHYVPEVK VE+E D E+ED   T QME
Sbjct: 241 GACSGCPSSSVTLKSGIENMLMHYVPEVKSVEEELDAEDEDAALTGQME 286

[Close]

BLAST of Cp4.1LG13g10470 vs. NCBI nr
Match: gi|720046218|ref|XP_010270438.1| (PREDICTED: nifU-like protein 4, mitochondrial [Nelumbo nucifera])

HSP 1 Score: 372.9 bits (956), Expect = 4.9e-100
Identity = 198/280 (70.71%), Postives = 222/280 (79.29%), Query Frame = 1


Query: 1   MRGLGSLIVRARR--------ISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTC 60
           MRG+G L+ R  R          TL  H G  + F S+  T+     + + S     +  
Sbjct: 1   MRGVGRLLTRVVRGRPELNGENKTLFLHRG--LFFASSTATTPFQRNQNSYSTSSLLKLS 60

Query: 61  SDPFLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPL 120
             P L S +WS FGGQ+R +FI+T STPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPL
Sbjct: 61  PIPALISTKWSVFGGQRRNVFIQTLSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPL 120

Query: 121 AKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAA 180
           AKALYG+DGV RVFFGSDF+TVTKS+E SWD LKPEIFA+IMDFYSSGQPLFLDAN AA+
Sbjct: 121 AKALYGIDGVTRVFFGSDFLTVTKSDETSWDLLKPEIFAAIMDFYSSGQPLFLDANMAAS 180

Query: 181 MDTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPS 240
           +DTAI+EDDSETVAMIKELLETRIRP VQDDGGDIEYRG++ ETGIVKLRMQGACSGCPS
Sbjct: 181 LDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDIETGIVKLRMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQM 273
           SS+TLKSGIENMLMHYVPEVKGVEQE D   ED + T Q+
Sbjct: 241 SSITLKSGIENMLMHYVPEVKGVEQELD--NEDTELTGQI 276

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g10470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NIFU4_ARATH	1.9e-96	67.39	NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1	[more]
NIFU5_ARATH	3.4e-93	72.73	NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5 PE=2 SV=1	[more]
NFU1_DROME	5.9e-61	59.70	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogas...	[more]
NFU1_MOUSE	1.0e-60	57.92	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus musculus GN=Nfu1...	[more]
NFU1_DROER	2.2e-60	59.20	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta GN...	[more]

BLAST of Cp4.1LG13g10470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE63_CUCSA	8.1e-134	89.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045100 PE=4 SV=1	[more]
F6HVQ1_VITVI	2.3e-104	71.74	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00620 PE=4 SV=...	[more]
W9QGE4_9ROSA	1.5e-100	68.86	NifU-like protein 4 OS=Morus notabilis GN=L484_018328 PE=4 SV=1	[more]
A0A061FWK2_THECC	5.9e-100	70.71	NFU domain protein 4 isoform 1 OS=Theobroma cacao GN=TCM_043933 PE=4 SV=1	[more]
A0A0B0NQK8_GOSAR	3.8e-99	71.59	NifU-like protein 4, mitochondrial OS=Gossypium arboreum GN=F383_18866 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g10470 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20970.1	1.1e-97	67.39	NFU domain protein 4	[more]
AT1G51390.1	1.9e-94	72.73	NFU domain protein 5	[more]
AT4G25910.1	1.9e-09	45.59	NFU domain protein 3	[more]
AT5G49940.1	1.9e-09	34.86	NIFU-like protein 2	[more]
AT4G01940.1	3.6e-08	37.18	NFU domain protein 1	[more]

BLAST of Cp4.1LG13g10470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446277\|ref\|XP_004140898.1\|	1.2e-133	89.01	PREDICTED: nifU-like protein 4, mitochondrial [Cucumis sativus]	[more]
gi\|659113477\|ref\|XP_008456595.1\|	9.8e-133	88.28	PREDICTED: nifU-like protein 4, mitochondrial [Cucumis melo]	[more]
gi\|225464130\|ref\|XP_002264979.1\|	3.3e-104	71.74	PREDICTED: nifU-like protein 4, mitochondrial [Vitis vinifera]	[more]
gi\|703070370\|ref\|XP_010088769.1\|	2.2e-100	68.86	NifU-like protein 4 [Morus notabilis]	[more]
gi\|720046218\|ref\|XP_010270438.1\|	4.9e-100	70.71	PREDICTED: nifU-like protein 4, mitochondrial [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051536	iron-sulfur cluster binding
GO:0005506	iron ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR017065	NFU1 iron-sulfur cluster scaffold homologue
IPR014824	Nfu/NifU_N
IPR001075	NIF_FeS_clus_asmbl_NifU_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:1900871	chloroplast mRNA modification
biological_process	GO:0044723	single-organism carbohydrate metabolic process
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g10470.1	Cp4.1LG13g10470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PRODOM	PD002830		coord: 196..254 score: 2.0
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 188..256 score: 6.1
IPR014824	Scaffold protein Nfu/NifU, N-terminal	GENE3D	G3DSA:3.30.1370.70		coord: 71..162 score: 1.1
IPR014824	Scaffold protein Nfu/NifU, N-terminal	PFAM	PF08712	Nfu_N	coord: 74..160 score: 2.8
IPR014824	Scaffold protein Nfu/NifU, N-terminal	SMART	SM00932	Nfu_N_3a	coord: 74..160 score: 5.4
IPR014824	Scaffold protein Nfu/NifU, N-terminal	unknown	SSF110836	Hypothetical protein SAV1430	coord: 72..162 score: 1.96
IPR017065	NFU1 iron-sulfur cluster scaffold homologue	PANTHER	PTHR11178:SF1	NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL	coord: 7..272 score: 2.7E
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 7..272 score: 2.7E
None	No IPR available	unknown	SSF117916	Fe-S cluster assembly (FSCA) domain-like	coord: 174..260 score: 3.05

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g10470	Cucsa.364710	Cucumber (Gy14) v1	cgycpeB0951
Cp4.1LG13g10470	CmaCh15G005170	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g10470	CmaCh04G025250	Cucurbita maxima (Rimu)	cmacpeB705
Cp4.1LG13g10470	CmoCh04G026440	Cucurbita moschata (Rifu)	cmocpeB657
Cp4.1LG13g10470	CmoCh15G005260	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g10470	Cla013699	Watermelon (97103) v1	cpewmB173
Cp4.1LG13g10470	Csa6G045100	Cucumber (Chinese Long) v2	cpecuB197
Cp4.1LG13g10470	MELO3C019892	Melon (DHL92) v3.5.1	cpemeB164
Cp4.1LG13g10470	ClCG08G008200	Watermelon (Charleston Gray)	cpewcgB183
Cp4.1LG13g10470	CSPI06G03900	Wild cucumber (PI 183967)	cpecpiB198
Cp4.1LG13g10470	Lsi08G006510	Bottle gourd (USVL1VR-Ls)	cpelsiB158
Cp4.1LG13g10470	MELO3C019892.2	Melon (DHL92) v3.6.1	cpemedB196
Cp4.1LG13g10470	CsaV3_6G004170	Cucumber (Chinese Long) v3	cpecucB0237
Cp4.1LG13g10470	Bhi04G001328	Wax gourd	cpewgoB0248
Cp4.1LG13g10470	CsGy6G003870	Cucumber (Gy14) v2	cgybcpeB740
Cp4.1LG13g10470	Carg01682	Silver-seed gourd	carcpeB1157
Cp4.1LG13g10470	Carg04614	Silver-seed gourd	carcpeB0962

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG13g10470	Cp4.1LG01g24900	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:

None