Cp4.1LG01g24900 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g24900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	NifU-like protein 5, mitochondrial
Location	Cp4.1LG01 : 18642510 .. 18646906 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGATTTAGTAACATTTTTTTTAGCCTTTTGCAAAATCAGGGAGAAGGATGAGGGGATTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTCCGGGATTGAATTCTCGAGGCGTTGGGAAGATCCGATTTGTTTCTGCTGCAGCAACTTCTTCTCTATTCCGCGGCGAAGAAGCTGCTTCCGATTCTGTATCATCTAGAACTTTCTCTGATTCTTACTTGCGCTCCTGGAAATGGAACCGATTATTCGGAGGTGCGTCGATTTTGATGAACTAGCAATGGAAACGTTTCGTATTATGTGTATATAATCTGTTGTATTTTGTTGCATTCAGGACAGAGAAGAACAATGTTCATCGAAACTCAATCAACGCCGAATCCTTCGTCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTTGGGAGTGCTGATTTTCCTAATGCGCGTTCGGCTATGAACTCCCCACTGGCGAGAGCCCTTTATGGTGTTGATGGTACGTAGTTTGAACTTATATTATTATCCTTTTGGGTTTCTGTTGGACTTTCGATTGGGCAAAGCCCTTTTCCTTTTTGTGTGTGCCCTTGTTAAGGATTTGTTAGAATGAATAAGTGAATTGTAGGAATAGAAAAGTTGCATGTGTCATGGTCATGTTTGTTCAAGGCGGGTTACCCATGGTTTGACCATTGTATGCCAAAACCCTTGTCTTGTATCACTTTATTGCTTTCCTTTACTGTTTTCATGATGCGTAGTATTCTTATTGTATTTCTTTAAGTGTATGACGATACGGTAGAATCATGTTTATGCTTGGTAGACCTGGTAAACTTGAAATGCCTCATAATATATTATAGGAGGATACAACTAGTTGTCAATTTTTCCTACCCTGAGTTATATGCAAGTCGTGATGTTTCTTTCTTTGCTTGTAGCCATATAACGTTGTTTTCTTTAGTTCTTTCAAATCTTGCTTTCAAACTCTCTTTCTAAAATCTCTCTCTACCCCCCGTTTTCTAAAAAAATTTTCTCAAAGCGGGCTAGAGATTTGAGTATACGTTGTCAAGTTGAAGGCGACACAATTTCAAGTTGGTTGATTCACTTAGTGGTGAGAGTGAGTGTTGCACAATCGCTTACAAACGTCCCATAAGAGTGCGATTGTGACACGTGGCATAATGAATAAGTGCTACGACTCGAGTTCTAGGTTATGGAGGATTCTTACCAAAAATAACTGTACAATTTAAGTTAACCAACTCTAATTATAATCGTTTCGCTTCATTTTTCCCATATGTAAGGACGTTGTTGAATTGGTAGGTCGAATTTTCATCGGTTACAATGACTTAGTGATGGTTTACAAATATTCTCACTGATCTCATTGATGTCTGGTGTGGGGCTTACTTGTTTGCTTTGCAGGTGTTGTTCGAGTTTTCTTTGGATCAGATTTTGTTACTGTTACAAAGTCAAATGATGCTTCTTGGGATTTCCTGAAGCCCGAAATTTTTGCTGCAATCATGGACTTCTATTCTTCGGGGCAACCACTGTTTCTAGACTCTCAAACTGCTGCTGCCATGGACACAGCTATCAATGAAGTATATCTTCTGAGTTCTTACTGCAAATTAGTGCTCTTCCTTTTTAGATTTTTACTCATTAAGAAACAACTTAATTTTATAGATCACATATTGTTCTCTGAGGATGTTTATGGTAATTTTATATTAGATTGCTTTTTGATTGTGAACTTTGCACTTCTACAATGTTCTTTTTCCTCTCTTCCTCTCTTGCTATCATCTACATCAATCTACATGTAAGAGTCCTTGCCCACCGCTAGCAGATATTGTCCTCTTTAGGCTTTTTCATTCAGACTTTCCTTCGAGGTTTTTAAAATGAGTCTATTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCCAAATGATGTGGGATCTCACAAACCACCTCCTTCGGGGCCCAGCGACCTCACTAGCACTCATTCCCTTCTCCAATCAATGTGGGACCCCTCAATCTACCCCCCATCGGGGCCCAGTGTCTTTGCTGGCACACCGCCTCGTGTCCACCCCCTTCGGTGTCTGGCTTTGATACCATTTGTAACAGCCCAAGTCCACCGCTAGCCGATATTGTCCTCTTTGGGTTTTCCCTTCTGGGCTTCCCTCAAGGTTTTTATAACGTGTCTGGTAGGTAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCCCTCTCCTACCGACGTGGGATCTCACACTACATAATGTAATACTAGGTTGGATGAGAGTTCCTTGGTGAAGCCATACTAATTTATATAATTATATACGTAGATTTCTAATTGTTCCTTAAATACTAATATAGAAATATGAACATTTAACATCATCACACTTCAGATTAGAAGTGCTTGAGGCTTAGGTATTAATAGCATAATGTGATGCCTTGCAGTTCTATTGAAGACTCCTGCTCCTTATTCTTATTGAACTTACTGTATTGTAATCTTACTCCTTTGGATTCAACTTCAGCTAAGAACTTGTTTTCTATGTCAACGTCTTCTATCATATGTCAGATTTCTTTCGTAATATTATTTTTTTTGAGATTTGACCTCATGGTGTGATTGCTTGCCCTGCTACAAGTATTGAATCTTTCCTTAAAACATATACTTGTCATGTTGGAATTTGAAACATGATATATTCTTATAATTTAGTAATTTGATTCAACTTAGTTCTTAATAGATCCGTCCACATGTGCCTACTTTTTAGGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTCGAGACCCGTATTCGACCAGCAGTACAAGATGATGGCGGAGATATTGAGTACAGGGGATATGATGAGTAGGTTTTGCTGGATTCAGTTTAAGGTGTTCTGTAAAGTATCATATTGCTTATATCGATTGAACTTTGCATTTCTGTTTTCTTCAGAGAAACTGGTATTGTCAAATTGAGAATGCAAGGAGCATGCAGCGGCTGCCCAAGCTCATCTGTCACTCTAAAATCTGGCATTGAAAATATGTTGATGCATTATGTACCTGAGGTGAGGGTTATATGATCTTTTTATATTTGTAGTTACCTCACATTCAATGCAAAGCATATCCAATTTTCCGCTTGCAGCATTTCTGGCACAATTGCTCACGCATATTGATTGCTTTTGTTTGCTGATATTTATGCTGGCAGTATCTTCTATATGAATACCCACATTTCTTATATACATTTAGTTGCATGATGGAAGTATTGAGGTTGAATGCACACCAACTGGAATGGAAGGGCTTATTCTTTTTAGATAATAGGAGTGGAAGAACATTGCATCGGTATAATTTAGATTGAATCTTATTGTCATGACTAGAAAGTTGGTTTTCCAACTTCTTTATCCCTCCATAATATAGTCTTCTTCTCCAACGCACTATTACATGTTACATGTTGTAACAGTCTAAGCCCACTGATAGCAGATATTGTCCACTTTAGCCCGTTATGTATCGTTATTAACCTCACGGTTTTAAAACGTGTCTACCAGGGAGAGGTTTTTACACCCTTATAAGGGATGTTTCATTCCCCTCTCCAACCGACGTGGGATCTCACAATCCACCCCCCGGGTTCAGAGTCCTCATTGGCACACCGCTCGGTGTCTAGCTCTGATACCACTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTATCCGGTTTTAAAACGTGTCTATTAGGGAGATGTTTCCACACCCTTATAAAAAAAGGTTTTGCGTGAGATCTCACAACTACTGTTCATGTTTTACTATCATATGGAATGCAGTATGATCTTATTGGATAACAAGAATTCATCGACAAACGGAGCATGTTTGATAGGAAAAAGGTATTGTCCCCAAACACAGCCAAGTTAGAGAATCACTTTAAGAGGAGATTTAGAAATAGAATGATGTTTCAAAGCTGCGTAGCCCAATCCTAATGTATAGATCGTTTCCTCTTTTGTTCTTATGCTTCTCAGAATTATAGTATCTTTTTCTTGGATTATCTATGATTTAAATGTCTATTCTGGATTTATAGGTGAAGGGCGTGGAACAAGAATTTGACGTCGAGGAAGACGATGTAAAGTCAACCAGCCAGATGGAGTAAAAGGCGAGCTGGTCGATTCGTTCTTTGTTTCGTTGACCCACAACACGATCTCGAGGGTAACCCGTACGAGTTGGTCGATTCCTTCTTCGTTGGGTCGAGCTACAAGCCTACAAGCTAAAAAACCATAGTTTATAGAGTATAGTGTTACTTTTATTCCTCGCTAAGAAAAAAAATCTGTGAATATTGAACCGTAACTAGGATTTCATGGACTTTATTTTGGACTTCCGAAAATTTAAGGTTTTATTAAACATAATTTTTAATT

mRNA sequence

GCGGATTTAGTAACATTTTTTTTAGCCTTTTGCAAAATCAGGGAGAAGGATGAGGGGATTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTCCGGGATTGAATTCTCGAGGCGTTGGGAAGATCCGATTTGTTTCTGCTGCAGCAACTTCTTCTCTATTCCGCGGCGAAGAAGCTGCTTCCGATTCTGTATCATCTAGAACTTTCTCTGATTCTTACTTGCGCTCCTGGAAATGGAACCGATTATTCGGAGGACAGAGAAGAACAATGTTCATCGAAACTCAATCAACGCCGAATCCTTCGTCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTTGGGAGTGCTGATTTTCCTAATGCGCGTTCGGCTATGAACTCCCCACTGGCGAGAGCCCTTTATGGTGTTGATGGTGTTGTTCGAGTTTTCTTTGGATCAGATTTTGTTACTGTTACAAAGTCAAATGATGCTTCTTGGGATTTCCTGAAGCCCGAAATTTTTGCTGCAATCATGGACTTCTATTCTTCGGGGCAACCACTGTTTCTAGACTCTCAAACTGCTGCTGCCATGGACACAGCTATCAATGAAGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTCGAGACCCGTATTCGACCAGCAGTACAAGATGATGGCGGAGATATTGAGTACAGGGGATATGATGAAGAAACTGGTATTGTCAAATTGAGAATGCAAGGAGCATGCAGCGGCTGCCCAAGCTCATCTGTCACTCTAAAATCTGGCATTGAAAATATGTTGATGCATTATGTACCTGAGGTGAAGGGCGTGGAACAAGAATTTGACGTCGAGGAAGACGATGTAAAGTCAACCAGCCAGATGGAGTAAAAGGCGAGCTGGTCGATTCGTTCTTTGTTTCGTTGACCCACAACACGATCTCGAGGGTAACCCGTACGAGTTGGTCGATTCCTTCTTCGTTGGGTCGAGCTACAAGCCTACAAGCTAAAAAACCATAGTTTATAGAGTATAGTGTTACTTTTATTCCTCGCTAAGAAAAAAAATCTGTGAATATTGAACCGTAACTAGGATTTCATGGACTTTATTTTGGACTTCCGAAAATTTAAGGTTTTATTAAACATAATTTTTAATT

Coding sequence (CDS)

ATGAGGGGATTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTCCGGGATTGAATTCTCGAGGCGTTGGGAAGATCCGATTTGTTTCTGCTGCAGCAACTTCTTCTCTATTCCGCGGCGAAGAAGCTGCTTCCGATTCTGTATCATCTAGAACTTTCTCTGATTCTTACTTGCGCTCCTGGAAATGGAACCGATTATTCGGAGGACAGAGAAGAACAATGTTCATCGAAACTCAATCAACGCCGAATCCTTCGTCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTTGGGAGTGCTGATTTTCCTAATGCGCGTTCGGCTATGAACTCCCCACTGGCGAGAGCCCTTTATGGTGTTGATGGTGTTGTTCGAGTTTTCTTTGGATCAGATTTTGTTACTGTTACAAAGTCAAATGATGCTTCTTGGGATTTCCTGAAGCCCGAAATTTTTGCTGCAATCATGGACTTCTATTCTTCGGGGCAACCACTGTTTCTAGACTCTCAAACTGCTGCTGCCATGGACACAGCTATCAATGAAGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTCGAGACCCGTATTCGACCAGCAGTACAAGATGATGGCGGAGATATTGAGTACAGGGGATATGATGAAGAAACTGGTATTGTCAAATTGAGAATGCAAGGAGCATGCAGCGGCTGCCCAAGCTCATCTGTCACTCTAAAATCTGGCATTGAAAATATGTTGATGCATTATGTACCTGAGGTGAAGGGCGTGGAACAAGAATTTGACGTCGAGGAAGACGATGTAAAGTCAACCAGCCAGATGGAGTAA

Protein sequence

MRGLGSLIVRARRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFSDSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME

Homology

[Close]

BLAST of Cp4.1LG01g24900 vs. Swiss-Prot
Match: NIFU4_ARATH (NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 5.8e-101
Identity = 197/283 (69.61%), Postives = 229/283 (80.92%), Query Frame = 1


Query: 1   MRGLGSLIVRARRIPGLNSRGVGKIRFVSAAATSSLFRGEEA----ASDSVSSRTFS--- 60
           M+G+  L+    RI G   + V     V+++++SSL     +    A++ ++SRT     
Sbjct: 1   MKGIARLVTSLSRIGG--RKVVSGTSTVTSSSSSSLLLSRRSLFISATNLLNSRTKDSAL 60

Query: 61  ---DSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMN 120
              +S L + KWN L GGQRRTMFI+TQSTPNPSSLMFYPGKPVMEVGSADFPN RSA+ 
Sbjct: 61  PSLNSSLLAQKWNFL-GGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALG 120

Query: 121 SPLARALYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQT 180
           SPLA+++Y +DGVVRVFFGSDFVTVTKS+D SWD LKPEIFAA+MDFYSSGQPLFLDSQ 
Sbjct: 121 SPLAKSIYSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQA 180

Query: 181 AAAMDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSG 240
           AAA DTAI+EDDSETVAMIKELLETRIRPAVQDDGGDIEY G+D E+GIVKLRMQGACSG
Sbjct: 181 AAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSG 240

Query: 241 CPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQM 274
           CPSSSVTLKSGIENMLMHYV EVKGVEQEFD E+++   + +M
Sbjct: 241 CPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEDEEGTLSGEM 280

[Close]

BLAST of Cp4.1LG01g24900 vs. Swiss-Prot
Match: NIFU5_ARATH (NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.8e-94
Identity = 177/243 (72.84%), Postives = 203/243 (83.54%), Query Frame = 1


Query: 27  FVSAAATSSLFRGEEAASDSVSSRTFSDSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSL 86
           F+SAA    +   E   +++  + + S S+  +W        QRRTMFI+TQSTPNPSSL
Sbjct: 35  FISAATHFPVNFSESITTNASRNCSRSSSFPFNWI------EQRRTMFIQTQSTPNPSSL 94

Query: 87  MFYPGKPVMEVGSADFPNARSAMNSPLARALYGVDGVVRVFFGSDFVTVTKSNDASWDFL 146
           MF PGKPVME+GSADFPN+RSAM+SPLA+A++ +DGVVRVF+GSDFVTVTKS+D +WD L
Sbjct: 95  MFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDDVTWDIL 154

Query: 147 KPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINEDDSETVAMIKELLETRIRPAVQDDGG 206
           KP+IFA +MDFYSSGQPLFLDSQ  AA DTAI+EDDSETVAMIKELLETRIRP+VQDDGG
Sbjct: 155 KPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGG 214

Query: 207 DIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDD 266
           DIEY G+D ETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYV EVKGVEQEFD EE+ 
Sbjct: 215 DIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEEEG 271

Query: 267 VKS 270
             S
Sbjct: 275 TSS 271

[Close]

BLAST of Cp4.1LG01g24900 vs. Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.9e-61
Identity = 119/201 (59.20%), Postives = 150/201 (74.63%), Query Frame = 1


Query: 70  RRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLARALYGVDGVVRVFF 129
           RR+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A NSPLA+ L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFF 123

Query: 130 GSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINEDDSETVAM 189
           G+DFVT++K   A W  +KPE+FA IMDF++SG P+  D+Q  A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 183

Query: 190 IKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 249
           IKELL+TRIRP VQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 250 YVPEVKGVEQEFDVEEDDVKS 270
           Y+PEV+ VEQ FD  +  ++S
Sbjct: 244 YIPEVESVEQVFDEADRMIES 260

[Close]

BLAST of Cp4.1LG01g24900 vs. Swiss-Prot
Match: NFU1_DROER (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta GN=GG17526 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.0e-60
Identity = 117/193 (60.62%), Postives = 146/193 (75.65%), Query Frame = 1


Query: 70  RRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLARALYGVDGVVRVFF 129
           RR+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A +SPLA+ L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123

Query: 130 GSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINEDDSETVAM 189
           G+DFVT++K   A W  +KPE+FA IMDF++SG P+  D+Q  A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMM 183

Query: 190 IKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 249
           IKELL+TRIRP VQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 250 YVPEVKGVEQEFD 262
           Y+PEV+ VEQ FD
Sbjct: 244 YIPEVESVEQVFD 252

[Close]

BLAST of Cp4.1LG01g24900 vs. Swiss-Prot
Match: NFU1_DROSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila sechellia GN=GM13534 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.3e-60
Identity = 116/193 (60.10%), Postives = 146/193 (75.65%), Query Frame = 1


Query: 70  RRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLARALYGVDGVVRVFF 129
           RR+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A +SPLA+ L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123

Query: 130 GSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINEDDSETVAM 189
           G+DF+T++K   A W  +KPE+FA IMDF++SG P+  D+Q  A  DT I EDD ETV M
Sbjct: 124 GADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 183

Query: 190 IKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 249
           IKELL+TRIRP VQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 250 YVPEVKGVEQEFD 262
           Y+PEV+ VEQ FD
Sbjct: 244 YIPEVESVEQVFD 252

[Close]

BLAST of Cp4.1LG01g24900 vs. TrEMBL
Match: A0A0A0KE63_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045100 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.0e-128
Identity = 243/274 (88.69%), Postives = 252/274 (91.97%), Query Frame = 1


Query: 1   MRGLGSLIVRARRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFSDSYLRSW 60
           M+GLG LI+RARRIP L   G G  RF SAA TSS+F GEE AS S+SS   SDS LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTRFFSAATTSSMFGGEEPASCSISSTICSDSSLRSW 60

Query: 61  KWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGV 120
           K +  FGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA+ALYGV
Sbjct: 61  K-SIQFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGV 120

Query: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINE 180
           DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDS+TAAAMDTAI E
Sbjct: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKE 180

Query: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKS 240
           DDSETVAMIKELLETRIRPAVQDDGGDIEYRGY+EETGIV LRMQGACSGCPSSSVTLKS
Sbjct: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKS 240

Query: 241 GIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           GIENMLMHYVPEVKGVEQEFDVEE+DVKSTSQME
Sbjct: 241 GIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 273

[Close]

BLAST of Cp4.1LG01g24900 vs. TrEMBL
Match: F6HVQ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00620 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.7e-103
Identity = 202/278 (72.66%), Postives = 226/278 (81.29%), Query Frame = 1


Query: 1   MRGLGSLIVRA----RRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFSDSY 60
           M+GLG LI R     R  P        ++ F S   TS L    E  + S    +F  S 
Sbjct: 1   MKGLGRLIGRRLLCKRLEPWRKPLMPRRLIFSSFTTTSYL----ENPTSSSRFTSFKSSS 60

Query: 61  LRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARA 120
           L  W     FGGQRRTMFI+TQSTPNP+SLMFYPGKPVMEVGSADFPN+RSAM+SPLA++
Sbjct: 61  LPKWSH---FGGQRRTMFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKS 120

Query: 121 LYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDT 180
           LYG+DG+ RVFFGSDF+TVTKS+DASWDF+KPEIFAAIMDFYSSG+PLFLDS TAAAMDT
Sbjct: 121 LYGIDGITRVFFGSDFITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTAAAMDT 180

Query: 181 AINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSV 240
           AI+EDDSETVAMIKELLETRIRPAVQDDGGDIEYRG+D ETGIVKL+MQGACSGCPSSSV
Sbjct: 181 AIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSV 240

Query: 241 TLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           TLKSGIENMLMHYVPEVKGVEQE D E++DV  + QM+
Sbjct: 241 TLKSGIENMLMHYVPEVKGVEQELDAEDEDVALSGQMD 271

[Close]

BLAST of Cp4.1LG01g24900 vs. TrEMBL
Match: A0A061FWK2_THECC (NFU domain protein 4 isoform 1 OS=Theobroma cacao GN=TCM_043933 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.4e-101
Identity = 205/281 (72.95%), Postives = 228/281 (81.14%), Query Frame = 1


Query: 1   MRGLGSLIVRA----RRIPG--LNSRGVGKIRFVSAAATSS-LFRGEEAASDSVSSRTFS 60
           MRG+G L+ R+    R   G    S  V +    S++ TSS L  G +++  S +S T  
Sbjct: 1   MRGVGRLVRRSLDHCRTCGGSLFPSHLVSRRLLFSSSRTSSWLVIGSQSSILSSNSETLP 60

Query: 61  DSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPL 120
            S L   K    F GQRR MFI+TQSTPNPSSLMFYPGK VMEVGSADFPNARSAMNSPL
Sbjct: 61  SSSLLPRKGTP-FTGQRRNMFIQTQSTPNPSSLMFYPGKAVMEVGSADFPNARSAMNSPL 120

Query: 121 ARALYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAA 180
           A+ALYG+DG+ RVFFGSDFVTVTKS+DASWD LKPEIFAAIMDFYSSGQPLFLDS+TAAA
Sbjct: 121 AKALYGIDGIARVFFGSDFVTVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSKTAAA 180

Query: 181 MDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPS 240
           MDTAI+EDDSETVAMIKELLETRIRPAVQDDGGD+EYRG+D +TGIVKL+MQGACSGCPS
Sbjct: 181 MDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDVEYRGFDLDTGIVKLKMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           SSVTLKSGIENMLMHYVPEVKGVEQE D E++D     QME
Sbjct: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDAEDEDTTLAGQME 280

[Close]

BLAST of Cp4.1LG01g24900 vs. TrEMBL
Match: A0A067KCW2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18623 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.1e-101
Identity = 186/214 (86.92%), Postives = 199/214 (92.99%), Query Frame = 1


Query: 61  KWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGV 120
           +WN  F GQRRTMFI+TQSTPNPSSLMFYPGK VM+VGSADFP+ARSAMNSPLA+ALYG+
Sbjct: 71  QWNH-FAGQRRTMFIQTQSTPNPSSLMFYPGKAVMDVGSADFPSARSAMNSPLAKALYGI 130

Query: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINE 180
           DG+ RVFFGSDFVTVTKS+DASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAA DTAI+E
Sbjct: 131 DGITRVFFGSDFVTVTKSDDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAKDTAIHE 190

Query: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKS 240
           +DSETVAMIKELLETRIRPAVQDDGGDIEYRG+D ETGIVKLRMQGACSGCPSSSVTLKS
Sbjct: 191 EDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLRMQGACSGCPSSSVTLKS 250

Query: 241 GIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           GIENMLMHYV EVKGVEQE D E++D     QME
Sbjct: 251 GIENMLMHYVSEVKGVEQELDAEDEDAALAGQME 283

[Close]

BLAST of Cp4.1LG01g24900 vs. TrEMBL
Match: A0A0D2UWA7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G303900 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.9e-101
Identity = 201/281 (71.53%), Postives = 228/281 (81.14%), Query Frame = 1


Query: 1   MRGLGSLIVRA-------RRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFS 60
           M+G+G LI RA       R +    S  + +    S++ T SL      +S   S+  F 
Sbjct: 1   MKGVGRLISRALSHRQTCRSVAP--SELISRRLMFSSSRTPSLLAVGNPSSVLASNSEFL 60

Query: 61  DSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPL 120
            S L S KWN  F GQRR+MFI+TQSTPNPSSLMFYPGK VMEVGSADFPNARSAMNSPL
Sbjct: 61  AS-LPSLKWNH-FIGQRRSMFIQTQSTPNPSSLMFYPGKAVMEVGSADFPNARSAMNSPL 120

Query: 121 ARALYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAA 180
           A+ALYG+DG+ RVFFGSDF+TVTKS+DASWD LKPEIFAAIMDFYSSGQPLFLDS+TA++
Sbjct: 121 AKALYGIDGITRVFFGSDFITVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSKTASS 180

Query: 181 MDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPS 240
           MDTAI+EDDSETVAMIKELLETRIRPAVQDDGGDIEYRG+D + GIVKL+MQGACSGCPS
Sbjct: 181 MDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPDIGIVKLKMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           SSVTLKSGIENMLMHYVPEVKGVEQEFD E++D     ++E
Sbjct: 241 SSVTLKSGIENMLMHYVPEVKGVEQEFDAEDEDAALAGKLE 277

[Close]

BLAST of Cp4.1LG01g24900 vs. TAIR10
Match: AT3G20970.1 (AT3G20970.1 NFU domain protein 4)

HSP 1 Score: 368.6 bits (945), Expect = 3.3e-102
Identity = 197/283 (69.61%), Postives = 229/283 (80.92%), Query Frame = 1


Query: 1   MRGLGSLIVRARRIPGLNSRGVGKIRFVSAAATSSLFRGEEA----ASDSVSSRTFS--- 60
           M+G+  L+    RI G   + V     V+++++SSL     +    A++ ++SRT     
Sbjct: 1   MKGIARLVTSLSRIGG--RKVVSGTSTVTSSSSSSLLLSRRSLFISATNLLNSRTKDSAL 60

Query: 61  ---DSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMN 120
              +S L + KWN L GGQRRTMFI+TQSTPNPSSLMFYPGKPVMEVGSADFPN RSA+ 
Sbjct: 61  PSLNSSLLAQKWNFL-GGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALG 120

Query: 121 SPLARALYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQT 180
           SPLA+++Y +DGVVRVFFGSDFVTVTKS+D SWD LKPEIFAA+MDFYSSGQPLFLDSQ 
Sbjct: 121 SPLAKSIYSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQA 180

Query: 181 AAAMDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSG 240
           AAA DTAI+EDDSETVAMIKELLETRIRPAVQDDGGDIEY G+D E+GIVKLRMQGACSG
Sbjct: 181 AAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSG 240

Query: 241 CPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQM 274
           CPSSSVTLKSGIENMLMHYV EVKGVEQEFD E+++   + +M
Sbjct: 241 CPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEDEEGTLSGEM 280

[Close]

BLAST of Cp4.1LG01g24900 vs. TAIR10
Match: AT1G51390.1 (AT1G51390.1 NFU domain protein 5)

HSP 1 Score: 347.1 bits (889), Expect = 1.0e-95
Identity = 177/243 (72.84%), Postives = 203/243 (83.54%), Query Frame = 1


Query: 27  FVSAAATSSLFRGEEAASDSVSSRTFSDSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSL 86
           F+SAA    +   E   +++  + + S S+  +W        QRRTMFI+TQSTPNPSSL
Sbjct: 35  FISAATHFPVNFSESITTNASRNCSRSSSFPFNWI------EQRRTMFIQTQSTPNPSSL 94

Query: 87  MFYPGKPVMEVGSADFPNARSAMNSPLARALYGVDGVVRVFFGSDFVTVTKSNDASWDFL 146
           MF PGKPVME+GSADFPN+RSAM+SPLA+A++ +DGVVRVF+GSDFVTVTKS+D +WD L
Sbjct: 95  MFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDDVTWDIL 154

Query: 147 KPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINEDDSETVAMIKELLETRIRPAVQDDGG 206
           KP+IFA +MDFYSSGQPLFLDSQ  AA DTAI+EDDSETVAMIKELLETRIRP+VQDDGG
Sbjct: 155 KPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGG 214

Query: 207 DIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDD 266
           DIEY G+D ETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYV EVKGVEQEFD EE+ 
Sbjct: 215 DIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGEEEG 271

Query: 267 VKS 270
             S
Sbjct: 275 TSS 271

[Close]

BLAST of Cp4.1LG01g24900 vs. TAIR10
Match: AT5G49940.1 (AT5G49940.1 NIFU-like protein 2)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-10
Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 158 YSSGQPLFLDSQTAAAMDTAINEDDSETVAMIKELLET---RIRPAVQDDGGDIEYRGYD 217
           + S + LF  S+   A+ T    D    V + +E +E+    IRP +  DGG++     D
Sbjct: 58  FLSSRQLFRRSKVVKAVATP---DPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEID 117

Query: 218 EETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDVE 264
               IV++++QGAC  CPSS++T+K GIE  LM  +PE+  VE   D E
Sbjct: 118 GN--IVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEE 161

[Close]

BLAST of Cp4.1LG01g24900 vs. TAIR10
Match: AT4G25910.1 (AT4G25910.1 NFU domain protein 3)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 1


Query: 197 IRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 256
           +RP++  DGG++     D    +V L++QGAC  CPSSS+TLK GIE+ L   +PE+  V
Sbjct: 96  VRPSLMADGGNVALHEIDGL--VVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSV 155

Query: 257 EQEFDVE 264
           EQ  + E
Sbjct: 156 EQFLESE 160

[Close]

BLAST of Cp4.1LG01g24900 vs. TAIR10
Match: AT4G01940.1 (AT4G01940.1 NFU domain protein 1)

HSP 1 Score: 55.8 bits (133), Expect = 4.7e-08
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 1


Query: 191 ELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH-Y 250
           +L+   +RP +  DGG+++      E G+V L++QGAC+ CPSSS T+  GIE +L   +
Sbjct: 91  DLVLEDVRPFLISDGGNVDV--VSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKF 150

Query: 251 VPEVKGVEQEFDVE 264
              +K + Q FD E
Sbjct: 151 GDALKDIRQVFDEE 162

[Close]

BLAST of Cp4.1LG01g24900 vs. NCBI nr
Match: gi|449446277|ref|XP_004140898.1| (PREDICTED: nifU-like protein 4, mitochondrial [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 1.5e-128
Identity = 243/274 (88.69%), Postives = 252/274 (91.97%), Query Frame = 1


Query: 1   MRGLGSLIVRARRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFSDSYLRSW 60
           M+GLG LI+RARRIP L   G G  RF SAA TSS+F GEE AS S+SS   SDS LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTRFFSAATTSSMFGGEEPASCSISSTICSDSSLRSW 60

Query: 61  KWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGV 120
           K +  FGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA+ALYGV
Sbjct: 61  K-SIQFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGV 120

Query: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINE 180
           DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDS+TAAAMDTAI E
Sbjct: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKE 180

Query: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKS 240
           DDSETVAMIKELLETRIRPAVQDDGGDIEYRGY+EETGIV LRMQGACSGCPSSSVTLKS
Sbjct: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKS 240

Query: 241 GIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           GIENMLMHYVPEVKGVEQEFDVEE+DVKSTSQME
Sbjct: 241 GIENMLMHYVPEVKGVEQEFDVEEEDVKSTSQME 273

[Close]

BLAST of Cp4.1LG01g24900 vs. NCBI nr
Match: gi|659113477|ref|XP_008456595.1| (PREDICTED: nifU-like protein 4, mitochondrial [Cucumis melo])

HSP 1 Score: 466.1 bits (1198), Expect = 4.3e-128
Identity = 242/274 (88.32%), Postives = 252/274 (91.97%), Query Frame = 1


Query: 1   MRGLGSLIVRARRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFSDSYLRSW 60
           M+GLG LI+RARRIP L   G G  RF SAA TSS+F GE  AS S+SSR  SDS LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTRFFSAATTSSMFGGEGPASCSISSRICSDSSLRSW 60

Query: 61  KWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGV 120
           K +  FGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA+ALYGV
Sbjct: 61  K-SIKFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGV 120

Query: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINE 180
           DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDS+TAAAMDTAI E
Sbjct: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKE 180

Query: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKS 240
           DDSETVAMIKELLETRIRPAVQDDGGDIEYRGY+EETGIV LRMQGACSGCPSSSVTLKS
Sbjct: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKS 240

Query: 241 GIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           GIENMLMHYVPEVKGVEQEFD+EE+DVKSTSQME
Sbjct: 241 GIENMLMHYVPEVKGVEQEFDLEEEDVKSTSQME 273

[Close]

BLAST of Cp4.1LG01g24900 vs. NCBI nr
Match: gi|225464130|ref|XP_002264979.1| (PREDICTED: nifU-like protein 4, mitochondrial [Vitis vinifera])

HSP 1 Score: 382.1 bits (980), Expect = 8.2e-103
Identity = 202/278 (72.66%), Postives = 226/278 (81.29%), Query Frame = 1


Query: 1   MRGLGSLIVRA----RRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFSDSY 60
           M+GLG LI R     R  P        ++ F S   TS L    E  + S    +F  S 
Sbjct: 1   MKGLGRLIGRRLLCKRLEPWRKPLMPRRLIFSSFTTTSYL----ENPTSSSRFTSFKSSS 60

Query: 61  LRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARA 120
           L  W     FGGQRRTMFI+TQSTPNP+SLMFYPGKPVMEVGSADFPN+RSAM+SPLA++
Sbjct: 61  LPKWSH---FGGQRRTMFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKS 120

Query: 121 LYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDT 180
           LYG+DG+ RVFFGSDF+TVTKS+DASWDF+KPEIFAAIMDFYSSG+PLFLDS TAAAMDT
Sbjct: 121 LYGIDGITRVFFGSDFITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTAAAMDT 180

Query: 181 AINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSV 240
           AI+EDDSETVAMIKELLETRIRPAVQDDGGDIEYRG+D ETGIVKL+MQGACSGCPSSSV
Sbjct: 181 AIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSV 240

Query: 241 TLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           TLKSGIENMLMHYVPEVKGVEQE D E++DV  + QM+
Sbjct: 241 TLKSGIENMLMHYVPEVKGVEQELDAEDEDVALSGQMD 271

[Close]

BLAST of Cp4.1LG01g24900 vs. NCBI nr
Match: gi|590566828|ref|XP_007010344.1| (NFU domain protein 4 isoform 1 [Theobroma cacao])

HSP 1 Score: 376.7 bits (966), Expect = 3.4e-101
Identity = 205/281 (72.95%), Postives = 228/281 (81.14%), Query Frame = 1


Query: 1   MRGLGSLIVRA----RRIPG--LNSRGVGKIRFVSAAATSS-LFRGEEAASDSVSSRTFS 60
           MRG+G L+ R+    R   G    S  V +    S++ TSS L  G +++  S +S T  
Sbjct: 1   MRGVGRLVRRSLDHCRTCGGSLFPSHLVSRRLLFSSSRTSSWLVIGSQSSILSSNSETLP 60

Query: 61  DSYLRSWKWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPL 120
            S L   K    F GQRR MFI+TQSTPNPSSLMFYPGK VMEVGSADFPNARSAMNSPL
Sbjct: 61  SSSLLPRKGTP-FTGQRRNMFIQTQSTPNPSSLMFYPGKAVMEVGSADFPNARSAMNSPL 120

Query: 121 ARALYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAA 180
           A+ALYG+DG+ RVFFGSDFVTVTKS+DASWD LKPEIFAAIMDFYSSGQPLFLDS+TAAA
Sbjct: 121 AKALYGIDGIARVFFGSDFVTVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSKTAAA 180

Query: 181 MDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPS 240
           MDTAI+EDDSETVAMIKELLETRIRPAVQDDGGD+EYRG+D +TGIVKL+MQGACSGCPS
Sbjct: 181 MDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDVEYRGFDLDTGIVKLKMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           SSVTLKSGIENMLMHYVPEVKGVEQE D E++D     QME
Sbjct: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDAEDEDTTLAGQME 280

[Close]

BLAST of Cp4.1LG01g24900 vs. NCBI nr
Match: gi|802666959|ref|XP_012081293.1| (PREDICTED: nifU-like protein 4, mitochondrial [Jatropha curcas])

HSP 1 Score: 375.9 bits (964), Expect = 5.8e-101
Identity = 186/214 (86.92%), Postives = 199/214 (92.99%), Query Frame = 1


Query: 61  KWNRLFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGV 120
           +WN  F GQRRTMFI+TQSTPNPSSLMFYPGK VM+VGSADFP+ARSAMNSPLA+ALYG+
Sbjct: 71  QWNH-FAGQRRTMFIQTQSTPNPSSLMFYPGKAVMDVGSADFPSARSAMNSPLAKALYGI 130

Query: 121 DGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINE 180
           DG+ RVFFGSDFVTVTKS+DASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAA DTAI+E
Sbjct: 131 DGITRVFFGSDFVTVTKSDDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAKDTAIHE 190

Query: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKS 240
           +DSETVAMIKELLETRIRPAVQDDGGDIEYRG+D ETGIVKLRMQGACSGCPSSSVTLKS
Sbjct: 191 EDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLRMQGACSGCPSSSVTLKS 250

Query: 241 GIENMLMHYVPEVKGVEQEFDVEEDDVKSTSQME 275
           GIENMLMHYV EVKGVEQE D E++D     QME
Sbjct: 251 GIENMLMHYVSEVKGVEQELDAEDEDAALAGQME 283

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g24900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NIFU4_ARATH	5.8e-101	69.61	NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1	[more]
NIFU5_ARATH	1.8e-94	72.84	NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5 PE=2 SV=1	[more]
NFU1_DROME	5.9e-61	59.20	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogas...	[more]
NFU1_DROER	1.0e-60	60.62	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta GN...	[more]
NFU1_DROSE	1.3e-60	60.10	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila sechellia...	[more]

BLAST of Cp4.1LG01g24900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE63_CUCSA	1.0e-128	88.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045100 PE=4 SV=1	[more]
F6HVQ1_VITVI	5.7e-103	72.66	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00620 PE=4 SV=...	[more]
A0A061FWK2_THECC	2.4e-101	72.95	NFU domain protein 4 isoform 1 OS=Theobroma cacao GN=TCM_043933 PE=4 SV=1	[more]
A0A067KCW2_JATCU	4.1e-101	86.92	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18623 PE=4 SV=1	[more]
A0A0D2UWA7_GOSRA	6.9e-101	71.53	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G303900 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g24900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20970.1	3.3e-102	69.61	NFU domain protein 4	[more]
AT1G51390.1	1.0e-95	72.84	NFU domain protein 5	[more]
AT5G49940.1	3.0e-10	36.70	NIFU-like protein 2	[more]
AT4G25910.1	1.1e-09	44.78	NFU domain protein 3	[more]
AT4G01940.1	4.7e-08	39.19	NFU domain protein 1	[more]

BLAST of Cp4.1LG01g24900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446277\|ref\|XP_004140898.1\|	1.5e-128	88.69	PREDICTED: nifU-like protein 4, mitochondrial [Cucumis sativus]	[more]
gi\|659113477\|ref\|XP_008456595.1\|	4.3e-128	88.32	PREDICTED: nifU-like protein 4, mitochondrial [Cucumis melo]	[more]
gi\|225464130\|ref\|XP_002264979.1\|	8.2e-103	72.66	PREDICTED: nifU-like protein 4, mitochondrial [Vitis vinifera]	[more]
gi\|590566828\|ref\|XP_007010344.1\|	3.4e-101	72.95	NFU domain protein 4 isoform 1 [Theobroma cacao]	[more]
gi\|802666959\|ref\|XP_012081293.1\|	5.8e-101	86.92	PREDICTED: nifU-like protein 4, mitochondrial [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051536	iron-sulfur cluster binding
GO:0005506	iron ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR017065	NFU1 iron-sulfur cluster scaffold homologue
IPR014824	Nfu/NifU_N
IPR001075	NIF_FeS_clus_asmbl_NifU_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:1900871	chloroplast mRNA modification
biological_process	GO:0044723	single-organism carbohydrate metabolic process
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g24900.1	Cp4.1LG01g24900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PRODOM	PD002830		coord: 197..255 score: 1.0
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 189..257 score: 1.0
IPR014824	Scaffold protein Nfu/NifU, N-terminal	GENE3D	G3DSA:3.30.1370.70		coord: 72..163 score: 2.1
IPR014824	Scaffold protein Nfu/NifU, N-terminal	PFAM	PF08712	Nfu_N	coord: 75..161 score: 7.6
IPR014824	Scaffold protein Nfu/NifU, N-terminal	SMART	SM00932	Nfu_N_3a	coord: 75..161 score: 8.5
IPR014824	Scaffold protein Nfu/NifU, N-terminal	unknown	SSF110836	Hypothetical protein SAV1430	coord: 73..163 score: 6.02
IPR017065	NFU1 iron-sulfur cluster scaffold homologue	PANTHER	PTHR11178:SF1	NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL	coord: 6..273 score: 5.1E
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 6..273 score: 5.1E
None	No IPR available	unknown	SSF117916	Fe-S cluster assembly (FSCA) domain-like	coord: 175..261 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g24900	Cucsa.364710	Cucumber (Gy14) v1	cgycpeB0961
Cp4.1LG01g24900	CmaCh15G005170	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g24900	CmaCh04G025250	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g24900	CmoCh04G026440	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g24900	CmoCh15G005260	Cucurbita moschata (Rifu)	cmocpeB280
Cp4.1LG01g24900	Cla013699	Watermelon (97103) v1	cpewmB395
Cp4.1LG01g24900	Csa6G045100	Cucumber (Chinese Long) v2	cpecuB459
Cp4.1LG01g24900	MELO3C019892	Melon (DHL92) v3.5.1	cpemeB396
Cp4.1LG01g24900	ClCG08G008200	Watermelon (Charleston Gray)	cpewcgB417
Cp4.1LG01g24900	CSPI06G03900	Wild cucumber (PI 183967)	cpecpiB460
Cp4.1LG01g24900	Lsi08G006510	Bottle gourd (USVL1VR-Ls)	cpelsiB382
Cp4.1LG01g24900	MELO3C019892.2	Melon (DHL92) v3.6.1	cpemedB460
Cp4.1LG01g24900	CsaV3_6G004170	Cucumber (Chinese Long) v3	cpecucB0568
Cp4.1LG01g24900	Bhi04G001328	Wax gourd	cpewgoB0526
Cp4.1LG01g24900	CsGy6G003870	Cucumber (Gy14) v2	cgybcpeB797
Cp4.1LG01g24900	Carg01682	Silver-seed gourd	carcpeB1158
Cp4.1LG01g24900	Carg04614	Silver-seed gourd	carcpeB0965

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g24900	Cp4.1LG13g10470	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g24900	Cucurbita pepo (Zucchini)	cpecpeB038
Cp4.1LG01g24900	Cucurbita pepo (Zucchini)	cpecpeB379
Cp4.1LG01g24900	Cucurbita maxima (Rimu)	cmacpeB734
Cp4.1LG01g24900	Cucurbita moschata (Rifu)	cmocpeB401
Cp4.1LG01g24900	Cucurbita moschata (Rifu)	cmocpeB687
Cp4.1LG01g24900	Bottle gourd (USVL1VR-Ls)	cpelsiB365
Cp4.1LG01g24900	Watermelon (Charleston Gray)	cpewcgB398
Cp4.1LG01g24900	Watermelon (97103) v1	cpewmB438
Cp4.1LG01g24900	Cucumber (Gy14) v2	cgybcpeB635
Cp4.1LG01g24900	Silver-seed gourd	carcpeB1176
Cp4.1LG01g24900	Wax gourd	cpewgoB0560