Carg01682 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01682
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_004 : 2377947 .. 2380360 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAACTCTTCAATTTGCAAGAACAGCGAGGGAAAAATGAGGGGCTTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTTCACCACTGGGTTCTCACGGAGTTGGGAAGATTCGATTCTTCTCAGCCGCAACAACTTCTTCTATATTCGGCGGAAAAGAAGCTGCTTCGTGTTCTGTATCGTCAAGAACTTGCTCCGATCCTCTCTTGCGTTCATGGAGATGGAGCCAATTTGGAGGTGCGTGAGCTTTGACGAACCATCATTGGAATCAGCTGTATTTGTTTTTGAATAATCTGTCGTATTTTGTTGCATTCAGGACAAAAAAGAACAATGTTCATTGAAACTCAGTCAACACCCAATCCTTCATCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTCGGGAGTGCTGATTTTCCTAATGCACGTTCTGCTATGAACTCCCCACTAGCAAAGGCTCTTTATGGTGTTGACGGTACATATTCTGAACTTATGATATCTTTTTAGGTTTCTGTTGGATTTTCAATTTGGAATACCCGCTTCCTTTTATCTGAATTTTAAAGAGTTTAAGATGTATGCTTGCATTTTAGAGGTCTGGAATTATGTCGACATTGAACTGAGACATGGAACATTGAACTGAGAGTAGGAAAGTTGTGAGGCATAGTAAATAAGTGCTAGTTTGAAGTTTAATTGATATATGACTTGGTGTTGGTTTACAAGTGTTCTTACTGGTTTTACTGATTCCTGGCGTGGGGCGTTCTTGATTGCTTGTGCAGGTGTTATCCGAGTCTTCTTTGGATCAGATTTTGTTACTGTAACAAAGTCAAATGAGGCTTCGTGGGATTTCCTTAAGCCTGAAATTTTTGCTTCAATCATGGACTTCTATTCTTCTGGACAACCACTATTTCTAGACGCTAATACTGCTGCTGCCATGGATACAGCCATCAACGAAGTATGTCTTCTAACTGCAAATTAATCCACTTTCTTGTTAGAGTTTTACTCATTAAAAAACAAGTTAATTTTTTAGATCACATGGTGTTCTCTTCTCGTCGAACTTTTACATATTGGTTAGAAATAAGAAAGTAGAAAACTCATTTACGTTTTTCTCTCTCTTGGGATATTTATGATAATTTTATATTAGGTTATGTTTTGATCACAAATTATGCAATTCTATATGGTTCTCTTTCTCGCTTTCGATACTCGACATGATATAATACTAGGTCAAATGTGAGTTCCTTGGTGAAATGAAACCACACTAATTGATATACATAGATTTTATCTTCCTTAAGTGCTAATATAGAACTATGAACATTTAATGTCATCATACGTCGGATTAAAAGTACTTGAGGCTCATGGTATTAATAGAGTAATGTGGTGCCTTGCAGTTCCATTTCTACTTTTTTGGATACAACTTTGGCTAAGAACTTGTTTTCTGATCTTCATATTGGTCATTTTGATGGACATTCGATTTTCTCTTAAGTCAAATTAGTTACATTTTTTCTGTCCTGTCGTTAAGAAACGGGTTTTTCCTTTAATATAAAGTGAGGGATATACAAGCTACTGTGCCACTTGTGGAGACCTAGAGAACTGAAAAGGAATTACACAAGATACTGTAGTTGTACTTTTTGTTTTCAATCACTGAAGTTCTCTTGTTAGCTGTTATTAAAATTAGTATGTCTACTCAAAGAAGTTGAGTTAAGTCCAGCGCTAGCAGCTATTGTCCTCTTTAGGCTTTCCCTTTCGGGCTTCCCAACAAGGTTTTTAAAACTCTTCTGCTAGGGTGAGGTTTCCACACCCTTAAGGGTGTTTCGTTTTCCCCCCCCAACCGATGTGGGATCTTACAAGTTACTTACCTAAAAGATGAGTATGTCAATGTCTTTCTATTATATGTCAAAATTTATTTGTAATATTTCAATTTGAGGTTTGACTTTGTGGTCGTTGTTTTCTGTGCTGCTGAGTATTAAATCTTTCAAAGTTATATTTGTCATGTTGGAATCTGAAACATCATAAATTTTTATTATTCTAGTAGTTGGAAACAGCTTGATTCTTAATAGATCTGTCCACTTGTGCCTTTATTTAGGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTTGAGACTCGTATTCGACCAACAGTGCAAGATGATGGTGGAGATATTGAATACAGGGGATATAATGAGTAGGTTTTTCAGTTACAGGCGTTCCGTAAAGCATTAGGAGTTGTATGCTTGATTGCTTTTATATGGTTATGTATTGAATTTTCCATTTCTATCTTCTTCAGAGAAACTGGAATTGTCAAATTGAGAATGCAAGGAGCATGCAGTGGCTGCCCAAGCTCATCCGTCACTCTAAAATCTGGCATTGAAAATATGCTGATGCATTATGTACCAGAGGTGAGAGTTATGTAA

mRNA sequence

AAGAACTCTTCAATTTGCAAGAACAGCGAGGGAAAAATGAGGGGCTTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTTCACCACTGGGTTCTCACGGAGTTGGGAAGATTCGATTCTTCTCAGCCGCAACAACTTCTTCTATATTCGGCGGAAAAGAAGCTGCTTCGTGTTCTGTATCGTCAAGAACTTGCTCCGATCCTCTCTTGCGTTCATGGAGATGGAGCCAATTTGGAGGACAAAAAAGAACAATGTTCATTGAAACTCAGTCAACACCCAATCCTTCATCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTCGGGAGTGCTGATTTTCCTAATGCACGTTCTGCTATGAACTCCCCACTAGCAAAGGCTCTTTATGGTGTTGACGGTGTTATCCGAGTCTTCTTTGGATCAGATTTTGTTACTGTAACAAAGTCAAATGAGGCTTCGTGGGATTTCCTTAAGCCTGAAATTTTTGCTTCAATCATGGACTTCTATTCTTCTGGACAACCACTATTTCTAGACGCTAATACTGCTGCTGCCATGGATACAGCCATCAACGAAGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTTGAGACTCGTATTCGACCAACAGTGCAAGATGATGGTGGAGATATTGAATACAGGGGATATAATGAAGAAACTGGAATTGTCAAATTGAGAATGCAAGGAGCATGCAGTGGCTGCCCAAGCTCATCCGTCACTCTAAAATCTGGCATTGAAAATATGCTGATGCATTATGTACCAGAGGTGAGAGTTATGTAA

Coding sequence (CDS)

AAGAACTCTTCAATTTGCAAGAACAGCGAGGGAAAAATGAGGGGCTTAGGAAGTTTGATTGTGCGAGCTCGAAGAATTTCACCACTGGGTTCTCACGGAGTTGGGAAGATTCGATTCTTCTCAGCCGCAACAACTTCTTCTATATTCGGCGGAAAAGAAGCTGCTTCGTGTTCTGTATCGTCAAGAACTTGCTCCGATCCTCTCTTGCGTTCATGGAGATGGAGCCAATTTGGAGGACAAAAAAGAACAATGTTCATTGAAACTCAGTCAACACCCAATCCTTCATCTCTCATGTTCTATCCTGGAAAGCCTGTTATGGAAGTCGGGAGTGCTGATTTTCCTAATGCACGTTCTGCTATGAACTCCCCACTAGCAAAGGCTCTTTATGGTGTTGACGGTGTTATCCGAGTCTTCTTTGGATCAGATTTTGTTACTGTAACAAAGTCAAATGAGGCTTCGTGGGATTTCCTTAAGCCTGAAATTTTTGCTTCAATCATGGACTTCTATTCTTCTGGACAACCACTATTTCTAGACGCTAATACTGCTGCTGCCATGGATACAGCCATCAACGAAGATGATTCTGAAACTGTTGCTATGATTAAAGAGCTGCTTGAGACTCGTATTCGACCAACAGTGCAAGATGATGGTGGAGATATTGAATACAGGGGATATAATGAAGAAACTGGAATTGTCAAATTGAGAATGCAAGGAGCATGCAGTGGCTGCCCAAGCTCATCCGTCACTCTAAAATCTGGCATTGAAAATATGCTGATGCATTATGTACCAGAGGTGAGAGTTATGTAA

Protein sequence

KNSSICKNSEGKMRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVRVM

Homology

[Close]

BLAST of Carg01682 vs. NCBI nr
Match: XP_022939962.1 (nifU-like protein 4, mitochondrial [Cucurbita moschata])

HSP 1 Score: 500.4 bits (1287), Expect = 3.9e-138
Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSW 72
           MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGG EAASCSVSSRTC DPLLRSW
Sbjct: 1   MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGNEAASCSVSSRTCFDPLLRSW 60

Query: 73  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 132
           RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD
Sbjct: 61  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120

Query: 133 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 192
           GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED
Sbjct: 121 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 180

Query: 193 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 252
           DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 240

Query: 253 IENMLMHYVPEVR 266
           IENMLMHYVPEV+
Sbjct: 241 IENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. NCBI nr
Match: XP_022992592.1 (nifU-like protein 4, mitochondrial [Cucurbita maxima])

HSP 1 Score: 493.8 bits (1270), Expect = 3.6e-136
Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSW 72
           MRGLGSLIVRARRIS LGSHG GKIRFFSAATTSSIFGGKEAASCSVSSRTCSDP LRSW
Sbjct: 1   MRGLGSLIVRARRISTLGSHGGGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPFLRSW 60

Query: 73  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 132
            WSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNAR+AMNSPLAKALYGVD
Sbjct: 61  SWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARTAMNSPLAKALYGVD 120

Query: 133 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 192
           GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED
Sbjct: 121 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 180

Query: 193 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 252
           DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 240

Query: 253 IENMLMHYVPEVR 266
           IENMLMHYVPEV+
Sbjct: 241 IENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. NCBI nr
Match: XP_023550903.1 (nifU-like protein 4, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.4 bits (1269), Expect = 4.8e-136
Identity = 247/253 (97.63%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSW 72
           MRGLGSLIVRARRIS LGSHG GKIRFFSAATTSSIFGGKEA SC VSSRTCSDP LRSW
Sbjct: 1   MRGLGSLIVRARRISTLGSHGGGKIRFFSAATTSSIFGGKEAVSCYVSSRTCSDPFLRSW 60

Query: 73  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 132
           RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD
Sbjct: 61  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120

Query: 133 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 192
           GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED
Sbjct: 121 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 180

Query: 193 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 252
           DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 240

Query: 253 IENMLMHYVPEVR 266
           IENMLMHYVPEV+
Sbjct: 241 IENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. NCBI nr
Match: XP_022960817.1 (nifU-like protein 4, mitochondrial [Cucurbita moschata])

HSP 1 Score: 453.8 bits (1166), Expect = 4.2e-124
Identity = 227/253 (89.72%), Postives = 240/253 (94.86%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSW 72
           MRGLGSLIVRARRI  L S GVGKIRF SAA TSS+F G+EAAS SVSSRT SD  LRSW
Sbjct: 1   MRGLGSLIVRARRIPGLNSRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTFSDSYLRSW 60

Query: 73  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 132
           +W++FGGQ+RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA+ALYGVD
Sbjct: 61  KWNRFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGVD 120

Query: 133 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 192
           GV+RVFFGSDFVTVTKSN+ASWDFLKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAINED
Sbjct: 121 GVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINED 180

Query: 193 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 252
           DSETVAMIKELLETRIRP VQDDGGDIEYRGY+EETGIVKLRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVKLRMQGACSGCPSSSVTLKSG 240

Query: 253 IENMLMHYVPEVR 266
           IENMLMHYVPEV+
Sbjct: 241 IENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. NCBI nr
Match: XP_022990438.1 (nifU-like protein 4, mitochondrial [Cucurbita maxima])

HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123
Identity = 225/253 (88.93%), Postives = 238/253 (94.07%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSW 72
           MRGLGSLIVRARRI  L   GVGKIRF SAA TSS+F G+EAAS SVSSRTCSD  LRSW
Sbjct: 1   MRGLGSLIVRARRIPGLNPRGVGKIRFVSAAATSSLFRGEEAASDSVSSRTCSDSYLRSW 60

Query: 73  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 132
           +W++FGGQ+RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA+ALYGVD
Sbjct: 61  KWNRFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLARALYGVD 120

Query: 133 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 192
           GV+RVFFGSDFVTV KSN+ASWDFLKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAINED
Sbjct: 121 GVVRVFFGSDFVTVRKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAINED 180

Query: 193 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 252
           DSETVAMIKELLETRIRP VQDDGGDIEYRGY+EETGIV LRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPAVQDDGGDIEYRGYDEETGIVNLRMQGACSGCPSSSVTLKSG 240

Query: 253 IENMLMHYVPEVR 266
           IENMLMHYVPEV+
Sbjct: 241 IENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. TAIR10
Match: AT3G20970.1 (NFU domain protein 4)

HSP 1 Score: 337.4 bits (864), Expect = 7.9e-93
Identity = 161/197 (81.73%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 69  LRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKAL 128
           L + +W+  GGQ+RTMFI+TQSTPNPSSLMFYPGKPVMEVGSADFPN RSA+ SPLAK++
Sbjct: 65  LLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSI 124

Query: 129 YGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTA 188
           Y +DGV+RVFFGSDFVTVTKS++ SWD LKPEIFA++MDFYSSGQPLFLD+  AAA DTA
Sbjct: 125 YSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTA 184

Query: 189 INEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVT 248
           I+EDDSETVAMIKELLETRIRP VQDDGGDIEY G++ E+GIVKLRMQGACSGCPSSSVT
Sbjct: 185 ISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVT 244

Query: 249 LKSGIENMLMHYVPEVR 266
           LKSGIENMLMHYV EV+
Sbjct: 245 LKSGIENMLMHYVSEVK 261

[Close]

BLAST of Carg01682 vs. TAIR10
Match: AT1G51390.1 (NFU domain protein 5)

HSP 1 Score: 324.7 bits (831), Expect = 5.3e-89
Identity = 158/206 (76.70%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 60  SSRTCSDPLLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSA 119
           +SR CS      + W +   Q+RTMFI+TQSTPNPSSLMF PGKPVME+GSADFPN+RSA
Sbjct: 54  ASRNCSRSSSFPFNWIE---QRRTMFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSA 113

Query: 120 MNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDA 179
           M+SPLAKA++ +DGV+RVF+GSDFVTVTKS++ +WD LKP+IFA +MDFYSSGQPLFLD+
Sbjct: 114 MSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDS 173

Query: 180 NTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGAC 239
              AA DTAI+EDDSETVAMIKELLETRIRP+VQDDGGDIEY G++ ETGIVKLRMQGAC
Sbjct: 174 QATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGAC 233

Query: 240 SGCPSSSVTLKSGIENMLMHYVPEVR 266
           SGCPSSSVTLKSGIENMLMHYV EV+
Sbjct: 234 SGCPSSSVTLKSGIENMLMHYVSEVK 256

[Close]

BLAST of Carg01682 vs. TAIR10
Match: AT5G49940.1 (NIFU-like protein 2)

HSP 1 Score: 58.5 bits (140), Expect = 7.1e-09
Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 169 YSSGQPLFLDANTAAAMDTAINEDDSETVAMIKELLET---RIRPTVQDDGGDIEYRGYN 228
           + S + LF  +    A+ T    D    V + +E +E+    IRP +  DGG++    + 
Sbjct: 58  FLSSRQLFRRSKVVKAVAT---PDPILEVPLTEENVESVLDEIRPYLMSDGGNVAL--HE 117

Query: 229 EETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEV 265
            +  IV++++QGAC  CPSS++T+K GIE  LM  +PE+
Sbjct: 118 IDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEI 151

[Close]

BLAST of Carg01682 vs. TAIR10
Match: AT4G25910.1 (NFU domain protein 3)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 208 IRPTVQDDGGDIEYRGYNEETG-IVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEV 265
           +RP++  DGG++     +E  G +V L++QGAC  CPSSS+TLK GIE+ L   +PE+
Sbjct: 96  VRPSLMADGGNV---ALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEI 150

[Close]

BLAST of Carg01682 vs. TAIR10
Match: AT4G01940.1 (NFU domain protein 1)

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 202 ELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENML 258
           +L+   +RP +  DGG+++    + E G+V L++QGAC+ CPSSS T+  GIE +L
Sbjct: 91  DLVLEDVRPFLISDGGNVDV--VSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

[Close]

BLAST of Carg01682 vs. Swiss-Prot
Match: sp|Q9LIG6|NIFU4_ARATH (NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NIFU4 PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.4e-91
Identity = 161/197 (81.73%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 69  LRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKAL 128
           L + +W+  GGQ+RTMFI+TQSTPNPSSLMFYPGKPVMEVGSADFPN RSA+ SPLAK++
Sbjct: 65  LLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSI 124

Query: 129 YGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTA 188
           Y +DGV+RVFFGSDFVTVTKS++ SWD LKPEIFA++MDFYSSGQPLFLD+  AAA DTA
Sbjct: 125 YSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTA 184

Query: 189 INEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVT 248
           I+EDDSETVAMIKELLETRIRP VQDDGGDIEY G++ E+GIVKLRMQGACSGCPSSSVT
Sbjct: 185 ISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVT 244

Query: 249 LKSGIENMLMHYVPEVR 266
           LKSGIENMLMHYV EV+
Sbjct: 245 LKSGIENMLMHYVSEVK 261

[Close]

BLAST of Carg01682 vs. Swiss-Prot
Match: sp|Q9C8J2|NIFU5_ARATH (NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NIFU5 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 9.6e-88
Identity = 158/206 (76.70%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 60  SSRTCSDPLLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSA 119
           +SR CS      + W +   Q+RTMFI+TQSTPNPSSLMF PGKPVME+GSADFPN+RSA
Sbjct: 54  ASRNCSRSSSFPFNWIE---QRRTMFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSA 113

Query: 120 MNSPLAKALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDA 179
           M+SPLAKA++ +DGV+RVF+GSDFVTVTKS++ +WD LKP+IFA +MDFYSSGQPLFLD+
Sbjct: 114 MSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDS 173

Query: 180 NTAAAMDTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGAC 239
              AA DTAI+EDDSETVAMIKELLETRIRP+VQDDGGDIEY G++ ETGIVKLRMQGAC
Sbjct: 174 QATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGAC 233

Query: 240 SGCPSSSVTLKSGIENMLMHYVPEVR 266
           SGCPSSSVTLKSGIENMLMHYV EV+
Sbjct: 234 SGCPSSSVTLKSGIENMLMHYVSEVK 256

[Close]

BLAST of Carg01682 vs. Swiss-Prot
Match: sp|Q8SY96|NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster OX=7227 GN=CG32500 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-58
Identity = 114/185 (61.62%), Postives = 140/185 (75.68%), Query Frame = 0


Query: 81  KRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLAKALYGVDGVIRVFF 140
           +R+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A NSPLAK L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFF 123

Query: 141 GSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAM 200
           G+DFVT++K   A W  +KPE+FA IMDF++SG P+  DA   A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 183

Query: 201 IKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 260
           IKELL+TRIRPTVQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 261 YVPEV 265
           Y+PEV
Sbjct: 244 YIPEV 244

[Close]

BLAST of Carg01682 vs. Swiss-Prot
Match: sp|B3NYF7|NFU1_DROER (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta OX=7220 GN=GG17526 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.1e-58
Identity = 113/185 (61.08%), Postives = 140/185 (75.68%), Query Frame = 0


Query: 81  KRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLAKALYGVDGVIRVFF 140
           +R+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A +SPLAK L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123

Query: 141 GSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAM 200
           G+DFVT++K   A W  +KPE+FA IMDF++SG P+  DA   A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMM 183

Query: 201 IKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 260
           IKELL+TRIRPTVQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 261 YVPEV 265
           Y+PEV
Sbjct: 244 YIPEV 244

[Close]

BLAST of Carg01682 vs. Swiss-Prot
Match: sp|B4PZ52|NFU1_DROYA (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila yakuba OX=7245 GN=GE15286 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.1e-58
Identity = 113/185 (61.08%), Postives = 140/185 (75.68%), Query Frame = 0


Query: 81  KRTMFIETQSTPNPSSLMFYPGKPVMEVGSA-DFPNARSAMNSPLAKALYGVDGVIRVFF 140
           +R+MFI+TQ TPNP SL F PG  V+  G+  DFPN  +A +SPLAK L+ V+GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123

Query: 141 GSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINEDDSETVAM 200
           G+DFVT++K   A W  +KPE+FA IMDF++SG P+  DA   A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMM 183

Query: 201 IKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 260
           IKELL+TRIRPTVQ+DGGDI + GY  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 261 YVPEV 265
           Y+PEV
Sbjct: 244 YIPEV 244

[Close]

BLAST of Carg01682 vs. TrEMBL
Match: tr|A0A1S4E1X6|A0A1S4E1X6_CUCME (nifU-like protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496505 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 3.4e-122
Identity = 222/253 (87.75%), Postives = 235/253 (92.89%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSW 72
           M+GLG LI+RARRI  LG HG G  RFFSAATTSS+FGG+  ASCS+SSR CSD  LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTRFFSAATTSSMFGGEGPASCSISSRICSDSSLRSW 60

Query: 73  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 132
           +  +FGGQ+RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD
Sbjct: 61  KSIKFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120

Query: 133 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 192
           GV+RVFFGSDFVTVTKSN+ASWDFLKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAI ED
Sbjct: 121 GVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKED 180

Query: 193 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 252
           DSETVAMIKELLETRIRP VQDDGGDIEYRGYNEETGIV LRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKSG 240

Query: 253 IENMLMHYVPEVR 266
           IENMLMHYVPEV+
Sbjct: 241 IENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. TrEMBL
Match: tr|A0A0A0KE63|A0A0A0KE63_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G045100 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.6e-114
Identity = 211/253 (83.40%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRSW 72
           M+GLG LI+RARRI  LG HG G               G+E ASCS+SS  CSD  LRSW
Sbjct: 1   MKGLGRLILRARRIPSLGFHGGGNTXXXXXXXXXXXXXGEEPASCSISSTICSDSSLRSW 60

Query: 73  RWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 132
           +  QFGGQ+RTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD
Sbjct: 61  KSIQFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGVD 120

Query: 133 GVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINED 192
           GV+RVFFGSDFVTVTKSN+ASWDFLKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAI ED
Sbjct: 121 GVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDTAIKED 180

Query: 193 DSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKSG 252
           DSETVAMIKELLETRIRP VQDDGGDIEYRGYNEETGIV LRMQGACSGCPSSSVTLKSG
Sbjct: 181 DSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEETGIVTLRMQGACSGCPSSSVTLKSG 240

Query: 253 IENMLMHYVPEVR 266
           IENMLMHYVPEV+
Sbjct: 241 IENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. TrEMBL
Match: tr|F6HVQ1|F6HVQ1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0106g00620 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 9.0e-99
Identity = 186/256 (72.66%), Postives = 218/256 (85.16%), Query Frame = 0


Query: 13  MRGLGSLIVR---ARRISPLGSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLL 72
           M+GLG LI R    +R+ P     + +   FS+ TT+S      ++S   S ++ S P  
Sbjct: 1   MKGLGRLIGRRLLCKRLEPWRKPLMPRRLIFSSFTTTSYLENPTSSSRFTSFKSSSLP-- 60

Query: 73  RSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALY 132
              +WS FGGQ+RTMFI+TQSTPNP+SLMFYPGKPVMEVGSADFPN+RSAM+SPLAK+LY
Sbjct: 61  ---KWSHFGGQRRTMFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLY 120

Query: 133 GVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAI 192
           G+DG+ RVFFGSDF+TVTKS++ASWDF+KPEIFA+IMDFYSSG+PLFLD+NTAAAMDTAI
Sbjct: 121 GIDGITRVFFGSDFITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTAAAMDTAI 180

Query: 193 NEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTL 252
           +EDDSETVAMIKELLETRIRP VQDDGGDIEYRG++ ETGIVKL+MQGACSGCPSSSVTL
Sbjct: 181 HEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTL 240

Query: 253 KSGIENMLMHYVPEVR 266
           KSGIENMLMHYVPEV+
Sbjct: 241 KSGIENMLMHYVPEVK 251

[Close]

BLAST of Carg01682 vs. TrEMBL
Match: tr|A0A1R3HBU7|A0A1R3HBU7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20294 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.2e-97
Identity = 183/254 (72.05%), Postives = 213/254 (83.86%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPL-GSHGVGKIRFFSAATTSSIFGGKEAASCSVSSRTCSDPLLRS 72
           M+G+G LI RA+    L  SH   +   +S   +  +FG + +   S S  + +  LL  
Sbjct: 1   MKGVGRLIRRAQTCQSLCPSHLTSRRLIYSRTPSFGVFGNRSSMFVSNSESSLASSLL-P 60

Query: 73  WRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKALYGV 132
            +W+ FGGQ+R+MFI+TQSTPNP+SLMFYPGK VMEVGSADFPNARSAMNSPLAK LYG+
Sbjct: 61  LQWTHFGGQRRSMFIQTQSTPNPASLMFYPGKAVMEVGSADFPNARSAMNSPLAKTLYGI 120

Query: 133 DGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAMDTAINE 192
           DG+ RVFFGSDF+TVTKS++ASWD LKPEIFA+IMDFYSSGQPLFLD+ TAAAMDTAI+E
Sbjct: 121 DGITRVFFGSDFITVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSQTAAAMDTAIHE 180

Query: 193 DDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSSSVTLKS 252
           DDSETVAMIKELLETRIRP VQDDGGDIEYRG++ +TGIVKL+MQGACSGCPSSSVTLKS
Sbjct: 181 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPDTGIVKLKMQGACSGCPSSSVTLKS 240

Query: 253 GIENMLMHYVPEVR 266
           GIENMLMHYVPEV+
Sbjct: 241 GIENMLMHYVPEVK 253

[Close]

BLAST of Carg01682 vs. TrEMBL
Match: tr|A0A1U8B3Z7|A0A1U8B3Z7_NELNU (nifU-like protein 4, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LOC104606768 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.9e-96
Identity = 190/260 (73.08%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 13  MRGLGSLIVRARRISPLGSHGVGKIRF-----FSAATTSSIFGGKEAASCSVSS--RTCS 72
           MRG+G L+ R  R  P   +G  K  F     F A++T++    +   S S SS  +   
Sbjct: 1   MRGVGRLLTRVVRGRP-ELNGENKTLFLHRGLFFASSTATTPFQRNQNSYSTSSLLKLSP 60

Query: 73  DPLLRSWRWSQFGGQKRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA 132
            P L S +WS FGGQ+R +FI+T STPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA
Sbjct: 61  IPALISTKWSVFGGQRRNVFIQTLSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLA 120

Query: 133 KALYGVDGVIRVFFGSDFVTVTKSNEASWDFLKPEIFASIMDFYSSGQPLFLDANTAAAM 192
           KALYG+DGV RVFFGSDF+TVTKS+E SWD LKPEIFA+IMDFYSSGQPLFLDAN AA++
Sbjct: 121 KALYGIDGVTRVFFGSDFLTVTKSDETSWDLLKPEIFAAIMDFYSSGQPLFLDANMAASL 180

Query: 193 DTAINEDDSETVAMIKELLETRIRPTVQDDGGDIEYRGYNEETGIVKLRMQGACSGCPSS 252
           DTAI+EDDSETVAMIKELLETRIRP VQDDGGDIEYRG++ ETGIVKLRMQGACSGCPSS
Sbjct: 181 DTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDIETGIVKLRMQGACSGCPSS 240

Query: 253 SVTLKSGIENMLMHYVPEVR 266
           S+TLKSGIENMLMHYVPEV+
Sbjct: 241 SITLKSGIENMLMHYVPEVK 259

The following BLAST results are available for this feature:

BLAST of Carg01682 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939962.1	3.9e-138	98.81	nifU-like protein 4, mitochondrial [Cucurbita moschata]	[more]
XP_022992592.1	3.6e-136	97.63	nifU-like protein 4, mitochondrial [Cucurbita maxima]	[more]
XP_023550903.1	4.8e-136	97.63	nifU-like protein 4, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022960817.1	4.2e-124	89.72	nifU-like protein 4, mitochondrial [Cucurbita moschata]	[more]
XP_022990438.1	1.6e-123	88.93	nifU-like protein 4, mitochondrial [Cucurbita maxima]	[more]

BLAST of Carg01682 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20970.1	7.9e-93	81.73	NFU domain protein 4	[more]
AT1G51390.1	5.3e-89	76.70	NFU domain protein 5	[more]
AT5G49940.1	7.1e-09	34.34	NIFU-like protein 2	[more]
AT4G25910.1	4.6e-08	46.55	NFU domain protein 3	[more]
AT4G01940.1	3.0e-07	42.86	NFU domain protein 1	[more]

BLAST of Carg01682 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LIG6\|NIFU4_ARATH	1.4e-91	81.73	NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NIFU4 PE=2...	[more]
sp\|Q9C8J2\|NIFU5_ARATH	9.6e-88	76.70	NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NIFU5 PE=2...	[more]
sp\|Q8SY96\|NFU1_DROME	2.7e-58	61.62	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogas...	[more]
sp\|B3NYF7\|NFU1_DROER	6.1e-58	61.08	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta OX...	[more]
sp\|B4PZ52\|NFU1_DROYA	6.1e-58	61.08	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila yakuba OX...	[more]

BLAST of Carg01682 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E1X6\|A0A1S4E1X6_CUCME	3.4e-122	87.75	nifU-like protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496505 PE=4 ...	[more]
tr\|A0A0A0KE63\|A0A0A0KE63_CUCSA	2.6e-114	83.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G045100 PE=4 SV=1	[more]
tr\|F6HVQ1\|F6HVQ1_VITVI	9.0e-99	72.66	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0106g00620 PE=4 SV=...	[more]
tr\|A0A1R3HBU7\|A0A1R3HBU7_COCAP	2.2e-97	72.05	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20294 PE=4 ...	[more]
tr\|A0A1U8B3Z7\|A0A1U8B3Z7_NELNU	1.9e-96	73.08	nifU-like protein 4, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LOC104606768 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly

Vocabulary: **Molecular Function**
Term	Definition
GO:0051536	iron-sulfur cluster binding
GO:0005506	iron ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001075	NIF_FeS_clus_asmbl_NifU_C
IPR034904	FSCA_dom_sf
IPR035433	NFU1-like
IPR036498	Nfu/NifU_N_sf
IPR014824	Nfu/NifU_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01682-RA	Carg01682-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014824	Scaffold protein Nfu/NifU, N-terminal	SMART	SM00932	Nfu_N_3a	coord: 86..172 e-value: 5.4E-42 score: 155.5
IPR014824	Scaffold protein Nfu/NifU, N-terminal	PFAM	PF08712	Nfu_N	coord: 86..172 e-value: 2.7E-29 score: 100.9
IPR036498	Scaffold protein Nfu/NifU, N-terminal domain superfamily	GENE3D	G3DSA:3.30.1370.70		coord: 76..178 e-value: 3.1E-36 score: 125.1
IPR036498	Scaffold protein Nfu/NifU, N-terminal domain superfamily	SUPERFAMILY	SSF110836	Hypothetical protein SAV1430	coord: 84..174
IPR035433	NFU1-like	PIRSF	PIRSF036773	HIRIP5	coord: 53..267 e-value: 7.8E-90 score: 298.1
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	G3DSA:3.30.300.130		coord: 194..267 e-value: 1.1E-29 score: 104.3
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	SSF117916	Fe-S cluster assembly (FSCA) domain-like	coord: 186..265
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 200..265 e-value: 8.9E-28 score: 96.1
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PRODOM	PD002830		coord: 208..265 e-value: 1.0E-25 score: 289.0
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 76..265
None	No IPR available	PANTHER	PTHR11178:SF1	NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL	coord: 76..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01682	Cla013699	Watermelon (97103) v1	carwmB0826
Carg01682	Csa6G045100	Cucumber (Chinese Long) v2	carcuB0850
Carg01682	MELO3C019892	Melon (DHL92) v3.5.1	carmeB0823
Carg01682	ClCG08G008200	Watermelon (Charleston Gray)	carwcgB0805
Carg01682	CSPI06G03900	Wild cucumber (PI 183967)	carcpiB0870
Carg01682	Cucsa.364710	Cucumber (Gy14) v1	carcgyB0955
Carg01682	CmaCh04G025250	Cucurbita maxima (Rimu)	carcmaB1150
Carg01682	CmaCh15G005170	Cucurbita maxima (Rimu)	carcmaB1148
Carg01682	CmoCh04G026440	Cucurbita moschata (Rifu)	carcmoB1121
Carg01682	CmoCh15G005260	Cucurbita moschata (Rifu)	carcmoB1118
Carg01682	Lsi08G006510	Bottle gourd (USVL1VR-Ls)	carlsiB758
Carg01682	Cp4.1LG13g10470	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01682	Cp4.1LG01g24900	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01682	CsGy6G003870	Cucumber (Gy14) v2	carcgybB0824
Carg01682	MELO3C019892.2	Melon (DHL92) v3.6.1	carmedB0834
Carg01682	CsaV3_6G004170	Cucumber (Chinese Long) v3	carcucB0874
Carg01682	Cla97C08G150970	Watermelon (97103) v2	carwmbB0864
Carg01682	Bhi04G001328	Wax gourd	carwgoB0965

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01682	Carg04614	Silver-seed gourd	carcarB577

The following block(s) are covering this gene:

None