Cp4.1LG13g07720 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g07720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	LuxR family transcriptional regulator, putative
Location	Cp4.1LG13 : 8349613 .. 8355909 (-)

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Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGCCTTTTTAGACATGGAATAACAATTAGAATGTGTGCATAAAACAAACATAAGAAAATATTTAGCCTTATAAAGCACAGAGAAGAGTGATATTAGTAAGCTAGTAGTTCCTCATTTCTTGAAAGCCTTAGAATGGAGCAGTTCCATTATGGTTCACAGAGAAGAGAAGAACCAGATGACTTAAATTTGAGAGAGTGGGCAGTAAGAGCAAGGATGAAGTGTGAGAACACAAATTCCAGAAGGTTTTCAGGGTCATATCTAAGAAGCTTTAGGGAAGAAGATGGGAGATCCTTCAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTACTCCATGAGAGGTACTCTCTCTGTTTTGTGGTTCATATCAGTTTTGACTCTCATATCATCTCATCTTTGATTTCTTCTTTGCAGATGAAATTGACCCATCAACCTACTCATTCACTACTGCTCTCAAAGGTAAGACATGTTTGAAAAGGAGTTGCCTGTCTTTGTTTTGAGATTGTGATAGAAAAGGGTTTTTGTGCAGCATTACAATCCAGGTCGAATTATAATAGTTGGGAAAGCTTGTCACCGCCAGAAGGGCTTGCTTTGAACTCAAAGTGGTATGAAGCAGAGAAATATATTTGCAATCCTCTCTCAGGGGAGGTTCCAATGGAGTGTTTTGTTGAGTTATGGAGTCTGCTCCCTGTATTTATAGCTTGGTCAATGGCTATATCCGGTAAAGCTATATATGGTACATAGCTATATATAGTAGATGGTTAAATCTGGTAAAGCTATATTTAGTAGACTGAACCATATATATATCCCGTCCAGTAAAGCTCTTAAATGTACTTTTCTATTCTCTGTACTCTCTTGTTGTACATGCCTGAAGTCATCAATAAAAAATCCTTTTAGCCAGAGTTCTCCTTGCAACTTCTCTCTATCCTTCTCTTTGTGTTCATCTAGATCGAGCGTGTGCGTTGTTGTGCGATCCTAACAACTGGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGAGTTATGGAGTCTGCTCCCTGTATTTATAGCTTGGTCAATGGCTATATCCGGTAAAGCTATATATGGTACATAGCTATATATAGTAGATGGTTAAATCTGGTAAAGCTATATTTAGTAGACTGAACCATATATATATCCCGTCCAGTAAAGCTCTTAAATGTACTTTTCTATTCTCTGTACTCTCTTGTTGTACATGCCTGAAGTCATCAATAAAAAATCCTTTTAGCCAGAGTTCTCCTTGCAACTTCTCTCTATCCTTCTCTTTGTGTTCATCTAGATCGAGCGTGTGCGTTGTTGTGCGATCCTAACAACTGGTATCGATCCTAACATGTTTATCTGCTAAGTCACTAAGCGCAAGGTCATTCAGAAATTCAAGAACCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACAAATTCCACACAACTCCAGGAAAGGCCAATTACTTTTACACAAATTCCAGGTACTATTTTCTTGCCTTTTTTGTTCCTTTTTTCTTGTAATGTGCTCTGAAAGGTTTCTCAAGTTCATTGTTTAAGATGTAGAAAAGAAAGTGGAAGGGATGACTAAGGATGTGGGAACTCAAAGCACACCGCCTGATAGAAGCTCAACAAGTCCTAGCCCTGCTTCCACGCCTCCCATTAAAGAGAGGTCGTTAAAGGATTGTGGGAAAGAAGAAACTGGTTCATCTAATTCTTATTCCATTCCCAGAAAGAAATCAGAGAAAGTGGTACGTACATTCTTTGATCTTTCAAATGATAATCATGATTAAGTAGAGGGAAGATTCAAACAAATCCAACTAATTAAGAAATCTAGGGAGAAATTTTAAGCTCATTCTCTTCCTCGTTGATTGTGCATTTCTACAAAAAAGGGTCGTCAAGATTAAGCTTGACTGATTCAGATCGATGTTCTAACAAGATGGAGAAGTGTAAGATTAAAATTGGGACCACGCTCTTCACATATTCCTGTAGGGCTCTGAACAAAAATATATCAGTATCAGGAGCAAAGCCAATTTCACAAAACTTACTTCCAAACTTCCCAACGGTAGTAATCACGACTGTTCACAATATTATGATATTGTCCACTTTAAGTATAAGCTCTCGTGGCTTTGCTTTTGGTTTCCCAAAAGGCCTCGTACCAATGGAGATGTATTCCTTAGTTATAAACTCATGATCATTCCTTAAATTAGCCAATATGGGACTCTCTCCCAACCATCCTCAATACCATCTACCGAAAACTCTTGTACCATTCACTTAACAATCCCACTTACCCAACCTTCCCCACGCTCCTTGCTTTATTGTGGAGCCCATTGAGATTCTTTCCTGCAAAATTCAAAATGGGCTCTCACAGTTTCTGCTGCTTTATGTTGAAAATTCTGCTTTTTTTCTCTCTTTCTGGAAAAAATGGTTATGCATTTGAAGGATATGGTCAAATGCCTAAAATAACGTAACAAAAAATGTCTCAGAATCATTGCATCTGTCATTCATAAAACATCCACATGCTTGTACCTCAATATCTGTTGGTATAATCTCAAAATAAGTCCACAGGTGAAAAGGCCGGGATTCAAGGGAAACACTAGAAGTGAAAAGAAACAAAAGAAGTAGAACGAAAAAATAGTTCTCAAAGGTTATTGTTGAGCACGAGAAGTTGTTAGGAATCATGACTCTCTTTCACAATGATATGATATTGTCCATTTTGAGCATAAGCTCTAGTGGCTTTACTTTGGGTTTTTCCAAAAAATATCATACGTATAAACCCATGATCATCCCCTAAATTAGTCAATGTGGGACGTCCCACATTGATTTTGTCTCACTGGTATAATTGTGAACTGTGATTCAACTACTGCCCTTAACATTGTTTGGCTAATCTTCTCATTTAAGGCATAAATTTTGATTCCAACACAGAGATATTGCATCTTAAACCCCAGTTGTTAAAGTAAAGTTTGAGGCATTTTCTACAAACGCCCATGAGGAAATGTTTACAGATGACAATGCCTAAAGTAGCAAATAAAAGAGATATCCCATTGTGTTCAGATATTGATACAGAACAGTGATGAGTGTAATATGAGTGCAGGTGAGAAGTAAAGCAAGCAAAGAAAAGGAGATGCCAAAAGGAGAAAAGGGAGATAGAAACAGTACAAAGGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGGGATAAACACAAAACAAGAAAGAACAACTTTTTACCTCATTTGAAAGGGTGCTGAAAAGTTACTGAGGAAATGGGAAAAGGAAAGGAGATTCGCTTTGTGTTTCATTTTCAGGCATATTTTTGCAGGTGTTAGGGAGGGGGTTTGTGTTTGCGCTAAGAAATTAAGAGCAATCATGAAGAAGGACCTCAGGCCTGCCTGCCTGCCTGTGTAGAAAGGTTAAGGCTTTTAGTTTTGGGGTTCTCTGCTTTAGTGTTGATATCATTTCTCGTTTATTGGGATGGTGAAAGTTGGGAGCAGCTTTACCTTCTCACTTCACGTGCATGCCTTTGTAGTAGACCTTCAGACAAACAAAGCTTTTAATAACTCGGACTACTAATTTCATTACCTTTCAGGTAGTTACTAACAAATGAAGCTGCTATCAATTCAAAATCCAATTCTAATATTATAATCATACGTGAAACAACATTTTCAATTATCTATATATAC

mRNA sequence

TTCAGCCTTTTTAGACATGGAATAACAATTAGAATGTGTGCATAAAACAAACATAAGAAAATATTTAGCCTTATAAAGCACAGAGAAGAGTGATATTAGTAAGCTAGTAGTTCCTCATTTCTTGAAAGCCTTAGAATGGAGCAGTTCCATTATGGTTCACAGAGAAGAGAAGAACCAGATGACTTAAATTTGAGAGAGTGGGCAGTAAGAGCAAGGATGAAGTGTGAGAACACAAATTCCAGAAGGTTTTCAGGGTCATATCTAAGAAGCTTTAGGGAAGAAGATGGGAGATCCTTCAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTACTCCATGAGAGATGAAATTGACCCATCAACCTACTCATTCACTACTGCTCTCAAAGTTTATTCCACAAATTCCACACAACTCCAGGAAAGGCCAATTACTTTTACACAAATTCCAGAAAAGAAAGTGGAAGGGATGACTAAGGATGTGGGAACTCAAAGCACACCGCCTGATAGAAGCTCAACAAGTCCTAGCCCTGCTTCCACGCCTCCCATTAAAGAGAGGTCGTTAAAGGATTGTGGGAAAGAAGAAACTGGTTCATCTAATTCTTATTCCATTCCCAGAAAGAAATCAGAGAAAGTGGTGAGAAGTAAAGCAAGCAAAGAAAAGGAGATGCCAAAAGGAGAAAAGGGAGATAGAAACAGTACAAAGGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGGGATAAACACAAAACAAGAAAGAACAACTTTTTACCTCATTTGAAAGGGTGCTGAAAAGTTACTGAGGAAATGGGAAAAGGAAAGGAGATTCGCTTTGTGTTTCATTTTCAGGCATATTTTTGCAGGTGTTAGGGAGGGGGTTTGTGTTTGCGCTAAGAAATTAAGAGCAATCATGAAGAAGGACCTCAGGCCTGCCTGCCTGCCTGTGTAGAAAGGTTAAGGCTTTTAGTTTTGGGGTTCTCTGCTTTAGTGTTGATATCATTTCTCGTTTATTGGGATGGTGAAAGTTGGGAGCAGCTTTACCTTCTCACTTCACGTGCATGCCTTTGTAGTAGACCTTCAGACAAACAAAGCTTTTAATAACTCGGACTACTAATTTCATTACCTTTCAGGTAGTTACTAACAAATGAAGCTGCTATCAATTCAAAATCCAATTCTAATATTATAATCATACGTGAAACAACATTTTCAATTATCTATATATAC

Coding sequence (CDS)

ATGGAGCAGTTCCATTATGGTTCACAGAGAAGAGAAGAACCAGATGACTTAAATTTGAGAGAGTGGGCAGTAAGAGCAAGGATGAAGTGTGAGAACACAAATTCCAGAAGGTTTTCAGGGTCATATCTAAGAAGCTTTAGGGAAGAAGATGGGAGATCCTTCAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTACTCCATGAGAGATGAAATTGACCCATCAACCTACTCATTCACTACTGCTCTCAAAGTTTATTCCACAAATTCCACACAACTCCAGGAAAGGCCAATTACTTTTACACAAATTCCAGAAAAGAAAGTGGAAGGGATGACTAAGGATGTGGGAACTCAAAGCACACCGCCTGATAGAAGCTCAACAAGTCCTAGCCCTGCTTCCACGCCTCCCATTAAAGAGAGGTCGTTAAAGGATTGTGGGAAAGAAGAAACTGGTTCATCTAATTCTTATTCCATTCCCAGAAAGAAATCAGAGAAAGTGGTGAGAAGTAAAGCAAGCAAAGAAAAGGAGATGCCAAAAGGAGAAAAGGGAGATAGAAACAGTACAAAGGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGGGATAAACACAAAACAAGAAAGAACAACTTTTTACCTCATTTGAAAGGGTGCTGA

Protein sequence

MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITISSTASSPGYYSMRDEIDPSTYSFTTALKVYSTNSTQLQERPITFTQIPEKKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEKVVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC

Homology

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BLAST of Cp4.1LG13g07720 vs. TrEMBL
Match: A0A0A0KSN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644010 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-55
Identity = 127/177 (71.75%), Postives = 138/177 (77.97%), Query Frame = 1


Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKVYSTNSTQLQERPITFTQ--------IPEKKV 120
           + T S+  + + R  I  S      A  VYSTNS Q+QERPI+F Q        IPEKK+
Sbjct: 134 AKTLSARSFRNFRTRITMS------APLVYSTNSRQIQERPISFPQEEAIHHYPIPEKKM 193

Query: 121 EGM-TKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEKVV 180
           EGM TKDVGTQSTPPDRSSTSPSPASTPPIKERSLK+CGKE+TGSS SYSIP+KK EKVV
Sbjct: 194 EGMRTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKECGKEQTGSSKSYSIPKKKLEKVV 253

Query: 181 RSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 229
             KA KEKE+ K EKGDRNST EQTW QGGCLSWMRTRQRDKHKTRK NFLPHLKGC
Sbjct: 254 TIKARKEKEVTKEEKGDRNSTNEQTWSQGGCLSWMRTRQRDKHKTRKKNFLPHLKGC 304

[Close]

BLAST of Cp4.1LG13g07720 vs. TrEMBL
Match: A0A0B2PXJ1_GLYSO (DNA-directed RNA polymerases I and III subunit RPAC2 OS=Glycine soja GN=glysoja_016099 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 105/241 (43.57%), Postives = 130/241 (53.94%), Query Frame = 1


Query: 2   EQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITIS 61
           E   Y S+RR+E  + NLREWAV+AR+  E TNSRR+SGSY+RSFR ED RSFRSNITIS
Sbjct: 6   EPLPYSSRRRDE-SEFNLREWAVKARISREGTNSRRYSGSYMRSFR-EDTRSFRSNITIS 65

Query: 62  STASSPGYYSMRDEIDPSTYSFTTALKVYSTNSTQ-----------------------LQ 121
           STASSPGY  ++DEIDPSTYSFTTALK     S+                          
Sbjct: 66  STASSPGYL-LKDEIDPSTYSFTTALKALQARSSYNSWECLSPDGFALNSKWNEAERIAM 125

Query: 122 ERPITFT--QIPEKKVEGM------------------TKDVGTQSTPPDRSSTSPSPAST 181
             P+ ++   IP K                       T+DVGTQSTPP  SSTSPSPAST
Sbjct: 126 SAPLVYSSKHIPTKPATFTQEEVALQFPNPEKKKEGMTRDVGTQSTPPYISSTSPSPAST 185

Query: 182 PPIKERSLKDCGKEETGSSNSYSIPRKKSEKVVRSKASKEKEMPKGEKGDRNSTKEQTWR 200
           P I ERS      +   S +  S  + KSE+ V  K  +  E  + E+      +++ WR
Sbjct: 186 PSITERS------KPLVSDSPNSNAKTKSEEEVEEKDKETWETKETER------EKKVWR 231

[Close]

BLAST of Cp4.1LG13g07720 vs. TrEMBL
Match: M5WTB7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010553mg PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 67/94 (71.28%), Postives = 78/94 (82.98%), Query Frame = 1


Query: 1  MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
          ME+  YGS+RR+E +  +LREWAV+AR+  ENTNSRRFS SY+RSFR ED RSFRSNITI
Sbjct: 1  MEEPPYGSRRRDETE-FSLREWAVKARISRENTNSRRFSASYVRSFR-EDTRSFRSNITI 60

Query: 61 SSTASSPGYYSMRDEIDPSTYSFTTALKVYSTNS 95
          SSTASSPG Y++RDEIDP+TYSFTTALK     S
Sbjct: 61 SSTASSPG-YNLRDEIDPATYSFTTALKALQARS 91

[Close]

BLAST of Cp4.1LG13g07720 vs. TrEMBL
Match: A0A0B2SRM3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_040078 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.3e-23
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 1


Query: 2  EQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITIS 61
          E   Y S+RR+E  + NLREWAV+AR++ ENTNSRR+SGSY+RSFR ED RSFRSNITIS
Sbjct: 6  EPLPYSSRRRDE-SEFNLREWAVKARIRRENTNSRRYSGSYMRSFR-EDTRSFRSNITIS 65

Query: 62 STASSPGYYSMRDEIDPSTYSFTTALK 89
          STASSPG Y ++D+IDPSTYSFTTALK
Sbjct: 66 STASSPG-YPLKDDIDPSTYSFTTALK 89

[Close]

BLAST of Cp4.1LG13g07720 vs. TrEMBL
Match: I1KWQ4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G256900 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.3e-23
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 1


Query: 2  EQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITIS 61
          E   Y S+RR+E  + NLREWAV+AR++ ENTNSRR+SGSY+RSFR ED RSFRSNITIS
Sbjct: 6  EPLPYSSRRRDE-SEFNLREWAVKARIRRENTNSRRYSGSYMRSFR-EDTRSFRSNITIS 65

Query: 62 STASSPGYYSMRDEIDPSTYSFTTALK 89
          STASSPG Y ++D+IDPSTYSFTTALK
Sbjct: 66 STASSPG-YPLKDDIDPSTYSFTTALK 89

[Close]

BLAST of Cp4.1LG13g07720 vs. TAIR10
Match: AT3G02500.1 (AT3G02500.1 unknown protein)

HSP 1 Score: 82.8 bits (203), Expect = 3.0e-16
Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 11 REEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITISSTASSPGYY 70
          R E  + NLREWA +  +  E+ +SRRFS S +RSFR ED +S  +N+TISSTASSPG Y
Sbjct: 4  RGEELEFNLREWARQGHLTREDQSSRRFSASCIRSFR-EDHKSCTTNVTISSTASSPG-Y 63

Query: 71 SMRDEIDPSTYSFTTALKVYSTNS 95
          S++DEIDPS YSF++ALK     S
Sbjct: 64 SLKDEIDPSNYSFSSALKALQAKS 85

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BLAST of Cp4.1LG13g07720 vs. TAIR10
Match: AT5G16030.3 (AT5G16030.3 unknown protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15
Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 1


Query: 10 RREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGR-SFRSN--ITISSTASS 69
          R +E + +NLREW  RAR+  EN +SRRFS SY+ SFRE+  + SFR+     ISSTASS
Sbjct: 4  RGDEHEFMNLREWDRRARLIRENPSSRRFSASYIGSFREDHHKSSFRTTNFNNISSTASS 63

Query: 70 PGYYSMRDEIDPSTYSFTTALK 89
          PG Y++++EIDPSTYSFT ALK
Sbjct: 64 PG-YTLKEEIDPSTYSFTNALK 84

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BLAST of Cp4.1LG13g07720 vs. NCBI nr
Match: gi|659119072|ref|XP_008459461.1| (PREDICTED: uncharacterized protein LOC103498590 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 6.2e-56
Identity = 128/177 (72.32%), Postives = 139/177 (78.53%), Query Frame = 1


Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKVYSTNSTQLQERPITFTQ--------IPEKKV 120
           + T S+  + + R  I  S      A  VYSTNS Q+QERPI+F Q        IPEKK+
Sbjct: 134 AKTLSARSFRNFRTRITMS------APLVYSTNSRQIQERPISFPQEEAINHYPIPEKKM 193

Query: 121 EGM-TKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEKVV 180
           +GM TKDVGTQSTPPDRSSTSPSPASTPPIKERSLK+CGKE+TGSSNSYSIP+KK EKVV
Sbjct: 194 DGMRTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKECGKEQTGSSNSYSIPKKKLEKVV 253

Query: 181 RSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 229
             KA KEKEM K EKGDRNST EQTW QGGCLSWMRTRQRDKHKTRK NFLPHLKGC
Sbjct: 254 TIKARKEKEMTKEEKGDRNSTNEQTWSQGGCLSWMRTRQRDKHKTRKKNFLPHLKGC 304

[Close]

BLAST of Cp4.1LG13g07720 vs. NCBI nr
Match: gi|449447486|ref|XP_004141499.1| (PREDICTED: uncharacterized protein LOC101213588 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 4.0e-55
Identity = 127/177 (71.75%), Postives = 138/177 (77.97%), Query Frame = 1


Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKVYSTNSTQLQERPITFTQ--------IPEKKV 120
           + T S+  + + R  I  S      A  VYSTNS Q+QERPI+F Q        IPEKK+
Sbjct: 134 AKTLSARSFRNFRTRITMS------APLVYSTNSRQIQERPISFPQEEAIHHYPIPEKKM 193

Query: 121 EGM-TKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEKVV 180
           EGM TKDVGTQSTPPDRSSTSPSPASTPPIKERSLK+CGKE+TGSS SYSIP+KK EKVV
Sbjct: 194 EGMRTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKECGKEQTGSSKSYSIPKKKLEKVV 253

Query: 181 RSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 229
             KA KEKE+ K EKGDRNST EQTW QGGCLSWMRTRQRDKHKTRK NFLPHLKGC
Sbjct: 254 TIKARKEKEVTKEEKGDRNSTNEQTWSQGGCLSWMRTRQRDKHKTRKKNFLPHLKGC 304

[Close]

BLAST of Cp4.1LG13g07720 vs. NCBI nr
Match: gi|828297599|ref|XP_012568870.1| (PREDICTED: uncharacterized protein LOC101507996 isoform X4 [Cicer arietinum])

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 112/257 (43.58%), Postives = 138/257 (53.70%), Query Frame = 1


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCE---NTNSRRFSGSYLRSFREEDGRSFRSN 60
           +E F Y S+RR+E  + NLREW V+AR+  E   N NSRR+SGSY+RSFRE D +S RSN
Sbjct: 5   VEPFPYSSRRRDE-SEFNLREWTVKARISRESNNNNNSRRYSGSYIRSFRE-DTKSQRSN 64

Query: 61  ITISSTASSPGYYSMRDEIDPSTYSFTT----------------ALKVYSTNSTQLQERP 120
           ITISSTASSPG Y  + E+     S  T                A  VYS  S  +Q +P
Sbjct: 65  ITISSTASSPG-YPFKGEVPMECLSSKTLSGRPFRNSTNRITMSAPLVYS--SRHIQTKP 124

Query: 121 ITFTQ--------IPEKKVEGMTKDVGTQSTPPD--RSSTSPSPASTPPIKERSLKDCGK 180
             + Q        I EKK EGMT+DVGTQSTPP    SS+SPSP STP I ERS      
Sbjct: 125 SNYIQQDVSLQFPIQEKKKEGMTRDVGTQSTPPPPYHSSSSPSPTSTPSIIERS----KT 184

Query: 181 EETGSSNSYSIPRKKSEKVVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQR 229
               S NS S  + KSE+ V  K +      +     R   + Q  +Q GC SWM  R+R
Sbjct: 185 RLVHSPNSNS--KSKSEEEVEVKDNDSWGTREKNNEWRKKEENQVCKQVGCFSWMMKRKR 244

[Close]

BLAST of Cp4.1LG13g07720 vs. NCBI nr
Match: gi|734354930|gb|KHN13815.1| (DNA-directed RNA polymerases I and III subunit RPAC2 [Glycine soja])

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 105/241 (43.57%), Postives = 130/241 (53.94%), Query Frame = 1


Query: 2   EQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITIS 61
           E   Y S+RR+E  + NLREWAV+AR+  E TNSRR+SGSY+RSFR ED RSFRSNITIS
Sbjct: 6   EPLPYSSRRRDE-SEFNLREWAVKARISREGTNSRRYSGSYMRSFR-EDTRSFRSNITIS 65

Query: 62  STASSPGYYSMRDEIDPSTYSFTTALKVYSTNSTQ-----------------------LQ 121
           STASSPGY  ++DEIDPSTYSFTTALK     S+                          
Sbjct: 66  STASSPGYL-LKDEIDPSTYSFTTALKALQARSSYNSWECLSPDGFALNSKWNEAERIAM 125

Query: 122 ERPITFT--QIPEKKVEGM------------------TKDVGTQSTPPDRSSTSPSPAST 181
             P+ ++   IP K                       T+DVGTQSTPP  SSTSPSPAST
Sbjct: 126 SAPLVYSSKHIPTKPATFTQEEVALQFPNPEKKKEGMTRDVGTQSTPPYISSTSPSPAST 185

Query: 182 PPIKERSLKDCGKEETGSSNSYSIPRKKSEKVVRSKASKEKEMPKGEKGDRNSTKEQTWR 200
           P I ERS      +   S +  S  + KSE+ V  K  +  E  + E+      +++ WR
Sbjct: 186 PSITERS------KPLVSDSPNSNAKTKSEEEVEEKDKETWETKETER------EKKVWR 231

[Close]

BLAST of Cp4.1LG13g07720 vs. NCBI nr
Match: gi|1009127162|ref|XP_015880548.1| (PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba])

HSP 1 Score: 121.3 bits (303), Expect = 2.2e-24
Identity = 88/180 (48.89%), Postives = 111/180 (61.67%), Query Frame = 1


Query: 51  GRSFRSNITISSTASSPGYYSMRDEIDPSTYSFTTALKVYSTNSTQLQERPITFTQIPEK 110
           GRSFR N+T   T S+P  Y           S +   +    N   + E  +    IPEK
Sbjct: 137 GRSFR-NLTNRITMSAPLIYP----------SHSRHFQTRPPNPNTVHEDVVHPVPIPEK 196

Query: 111 KVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEKV 170
           K+  MT+DVGTQSTPPD SS+SPSPASTPPI ERSLK  G E   S NSY+  + KS++ 
Sbjct: 197 KMGSMTRDVGTQSTPPDLSSSSPSPASTPPIVERSLKRFGLENGDSPNSYA--KLKSQQE 256

Query: 171 VRSKASKEKEMPKGEKG-DRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNN-FLPHLKGC 229
           V+   ++EKE  K E+G +++  K+Q+  QGGCLSWMR RQR+KHK RK N F   LKGC
Sbjct: 257 VKMPETREKEETKREEGKEKDEQKQQS--QGGCLSWMRKRQREKHKPRKKNIFALRLKGC 301

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g07720 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g07720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSN4_CUCSA	2.8e-55	71.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644010 PE=4 SV=1	[more]
A0A0B2PXJ1_GLYSO	1.2e-26	43.57	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Glycine soja GN=glysoja_...	[more]
M5WTB7_PRUPE	1.7e-23	71.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010553mg PE=4 SV=1	[more]
A0A0B2SRM3_GLYSO	8.3e-23	73.56	Uncharacterized protein OS=Glycine soja GN=glysoja_040078 PE=4 SV=1	[more]
I1KWQ4_SOYBN	8.3e-23	73.56	Uncharacterized protein OS=Glycine max GN=GLYMA_08G256900 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g07720 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02500.1	3.0e-16	57.14	unknown protein	[more]
AT5G16030.3	1.9e-15	59.76	unknown protein	[more]

BLAST of Cp4.1LG13g07720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119072\|ref\|XP_008459461.1\|	6.2e-56	72.32	PREDICTED: uncharacterized protein LOC103498590 [Cucumis melo]	[more]
gi\|449447486\|ref\|XP_004141499.1\|	4.0e-55	71.75	PREDICTED: uncharacterized protein LOC101213588 [Cucumis sativus]	[more]
gi\|828297599\|ref\|XP_012568870.1\|	1.8e-26	43.58	PREDICTED: uncharacterized protein LOC101507996 isoform X4 [Cicer arietinum]	[more]
gi\|734354930\|gb\|KHN13815.1\|	1.8e-26	43.57	DNA-directed RNA polymerases I and III subunit RPAC2 [Glycine soja]	[more]
gi\|1009127162\|ref\|XP_015880548.1\|	2.2e-24	48.89	PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g07720.1	Cp4.1LG13g07720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36748	FAMILY NOT NAMED	coord: 1..228 score: 2.7
None	No IPR available	PANTHER	PTHR36748:SF1	SUBFAMILY NOT NAMED	coord: 1..228 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g07720	Cucsa.238110	Cucumber (Gy14) v1	cgycpeB0626
Cp4.1LG13g07720	CmaCh04G028460	Cucurbita maxima (Rimu)	cmacpeB705
Cp4.1LG13g07720	CmoCh15G002040	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g07720	CmoCh04G029750	Cucurbita moschata (Rifu)	cmocpeB657
Cp4.1LG13g07720	Cla016454	Watermelon (97103) v1	cpewmB195
Cp4.1LG13g07720	Csa5G644010	Cucumber (Chinese Long) v2	cpecuB175
Cp4.1LG13g07720	MELO3C022089	Melon (DHL92) v3.5.1	cpemeB155
Cp4.1LG13g07720	ClCG11G005360	Watermelon (Charleston Gray)	cpewcgB159
Cp4.1LG13g07720	CSPI05G30010	Wild cucumber (PI 183967)	cpecpiB177
Cp4.1LG13g07720	Lsi03G002300	Bottle gourd (USVL1VR-Ls)	cpelsiB143
Cp4.1LG13g07720	MELO3C022089.2	Melon (DHL92) v3.6.1	cpemedB182
Cp4.1LG13g07720	CsaV3_5G039140	Cucumber (Chinese Long) v3	cpecucB0210
Cp4.1LG13g07720	Bhi06G000084	Wax gourd	cpewgoB0236
Cp4.1LG13g07720	CsGy5G029400	Cucumber (Gy14) v2	cgybcpeB598
Cp4.1LG13g07720	Carg02182	Silver-seed gourd	carcpeB0366
Cp4.1LG13g07720	Carg05922	Silver-seed gourd	carcpeB0031

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG13g07720	Cp4.1LG01g21970	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g07720	Melon (DHL92) v3.6.1	cpemedB177
Cp4.1LG13g07720	Cucumber (Chinese Long) v3	cpecucB0221
Cp4.1LG13g07720	Wax gourd	cpewgoB0239
Cp4.1LG13g07720	Wax gourd	cpewgoB0263
Cp4.1LG13g07720	Cucurbita maxima (Rimu)	cmacpeB305