Cp4.1LG01g21970 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGAAAAAGGAACTCAGCCTTTTCAGATATGGGATAATAAAGGACAAAATTAGAGAAATAAATTTGACATTATACAAAACAATCATTAACTAGTGATAATTTGTTTTTACAGCATGATGGAGAACATTTGGGCTTATAAACTACTGAGAAGAGACCGATATTTGGAAGCTTGAAGGGGTTTAAAAGGCTTGAATTCAACTAGTTGCTCATAGGTTCAGAGTCTTGGAATGGAGCAGTTTCATTATAGCTCGCAAAGAAGGGAAGAACCAGAGGACTTCAATTTGAGAGAGTGGCCAGTTAAGGGAAGGTTCAAGTGTGAGAACACAAGTTCCAGACGTTTTTCAGGGTCTTATTTAAGAAGCTTAAGGGAAGATGGCAGATCCTTCAGATCAAACATAACCATCTCCAGCACTGCTTCTTCACCAGGCTATTACTCCATGAGAGGTACTTTAATTACTTCTCTGTTTTCTGGTTCAAGTCAGTTTTTCCTGTCATGGGTTTCTCTCATCTTTTTTCTTTTGCAGATGAAATTGACCCATCAACCTACTCATTCACTGCTGCTATCAAAGGTAACACATTCTTGTAAACACATCAGAAATCAATCGTTTTTTGGCTGTAAAATGTCAAAAATGGAGTTTTTGTGCAGCATTGCAAGCTAAGTCAAGATATAATATGTGGGAAAGCTTGTCGCCTGATCAGTTTTCTTTGAACTCAAAGTGGTATGAAGCAGAGAAGTATATCTGCAATCCTCTTTCAGGCGAGGTTCCAATGGAGTGTTTATCTGCTAAAACACTAAGTGCAAGGTCATTCAGAAATTTCAGTAGCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACCAAGTCAAGACAACACCATGAAAGGCCGATTACTTTTCCCCAAGAGGAAGCAGTTAATCGATATCCAATTCCAGGTACCATCACAAATTTTATAGCATGCTTTGAAAGATTTATTTGAAGTTGGATTCTCAATATGAACAAGTTTCCATGTTTGAGTTGTAGAAAAGAAAGTGGAAGGGATGACAAAGGATGTTGGAACTCAAAGCACACCACCTGAAAGAAGTTCAACATGTCCTAGCCCTGCTTCCACGCCTCCCATGGTGACATCCTTAAAGGCATGTGGGAAAGAAGAAACTAATTCACCAAATTCTTGTTCTACTCAAACAAAGAAATCAGAGGAAGGGGTATGTACATTCTTTGATCTTTGAAATGATAATCATGATTTAGTAAAAGGAAGATCAAAGGGGTTTGAAATCACAAGCTTAATACAACCCAACTAATCAAGAAATCTAGGAAGAAGTCATATAGCCTCAACAAAAAGGTTAGAAGTATGAATCACCACCATCCCTACGTATTATTAAGCTAAAAAAAATCAATCTAGGAATAAATTTCAGGCTGATTAACCCATAACCCAAAACATAAGAGTGCTAATAGTGCATTTCTACAAATGGGGTCGTCAAGATTAGGCTCGACTGATTCAGAATGAAGTTCTAACAAGATGGGGGAAGTGTAAGAGTAAAATTGACACCATTTTCTGCTTCTTCACATAGGCTTATAGTTCACAGTCCTATGATTTTCTCCTATCGTTGTCTGTTTCCCAACAACTCATACAGTTGTGGTTGTCTCTGTTTGTGGGAAGCATTTTCCGGACAGAAAAAAAGAATCAATCAGAAGGGAAAAGGGAAAAAGAGAAGAAAACTTGGAGGATTCTAACCAAGAATATATCAGAACATGAACAAAGCCAATTTCACAAAACGTATTTCCAAACCCCAACCACCATAAACTCTGTACCATGCATTTAACAATCCCACTTCCCCAACCATCTCCCCACCATATACTAGCTTTATTGTGGAGCCCATCGAGATTCTTTCCTGGAAAATACAAAATGGGTTCTCACAGTTCCTGCTACTTTATGTAGAAATCTCTGCTTTATTTCTCTCTTTCTGGAAAAAAATGGTTATGCATTTGTAGAGCATGGTCGAATGGCCAAAATAATGCAAAAAAAAAAAAAAAAAGTATCCGAGTCATTGCATCTGTCATTCATAAGACATCCACATGCTTGTACCTCAATATCAGTAAGAATAATTTCAAAATCAGTCCACAGGTGGGCTGGGATTCAAGGGAAAAACTAAAAGTGAAAAGAAACAAGAAAGTAAAACGAAAAAACAGTTCTCAAAGGTTATCGTCCAGCATAAGAAGTGAACCTTCTGGATCTTGTCTTACTGGTATGATTGAACTGTGGTTCATCATTTCACCAGTGTGGCTGGCTTTACCATTGTTTGGCAGGATTATGGCCTCATTATGGTGAGTAACTCGGGCTGTGTGCCTTTCTATTTTCCTTCCCAATAACAACAGATTTATACCTTTCAGTTGGGGAGGAAAAGGTAACAACTCTAAATTAATGAAACCTTTACTTTCTCAATCAAATGTATTAGAGGCCCAAAACATCATTTAGTTGTACGGTCCTTCACGAGGCTAAATTTCTCGTTTTAGGCATGAAATTTCATTCCAACACAGAGATATTGTACAACAAAGTTTGAGCATTTTCTACAGATTTCCAGGAGGGTCATGTTCACATAAAAATGCCTAAATTAGCAAATATTGAGTGCAGGTGACAATTAAAGCAAGCAAAGAAAAGGAGATGACAAAAGGAGAAAAGGGAGATAGAAACAGTGCAAAGGAGCAAAGGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGACAGATAAACACAAAACAAGAACGAAGAATTTCTTACCTCATTTGAATTTAAAAGGGTGCTGAAAAGTTCCTGAGCAAAATGGCAAAAGGAGATTCTATCTATATTCAGGCATATTTTCCCGGGTGTTAGTGAGGTTTGTGTTCATGTTAAGAAATTAAGGGCAATCATGGAGAGACCTCAGGCCTGCGTAAGAAAGGTTAAGGCTCTTAGTTTCGTGGTTCTCTCTGCTTTAGTTTATTGTTTATTGGGATGGTGAAAGTTGGGAGCAGCTTTATCTTTCTCACTTCACGTGCATGCCTTTTGTCTTTACCTTTAGACAAACAAACCTTTCAATAACTAGGATTACTGATCCAAGTCTAATATTATAGATAA TGGGAAAAAGGAACTCAGCCTTTTCAGATATGGGATAATAAAGGACAAAATTAGAGAAATAAATTTGACATTATACAAAACAATCATTAACTAGTGATAATTTGTTTTTACAGCATGATGGAGAACATTTGGGCTTATAAACTACTGAGAAGAGACCGATATTTGGAAGCTTGAAGGGGTTTAAAAGGCTTGAATTCAACTAGTTGCTCATAGGTTCAGAGTCTTGGAATGGAGCAGTTTCATTATAGCTCGCAAAGAAGGGAAGAACCAGAGGACTTCAATTTGAGAGAGTGGCCAGTTAAGGGAAGGTTCAAGTGTGAGAACACAAGTTCCAGACGTTTTTCAGGGTCTTATTTAAGAAGCTTAAGGGAAGATGGCAGATCCTTCAGATCAAACATAACCATCTCCAGCACTGCTTCTTCACCAGGCTATTACTCCATGAGAGATGAAATTGACCCATCAACCTACTCATTCACTGCTGCTATCAAAGCATTGCAAGCTAAGTCAAGATATAATATGTGGGAAAGCTTGTCGCCTGATCAGTTTTCTTTGAACTCAAAGTGGTATGAAGCAGAGAAGTATATCTGCAATCCTCTTTCAGGCGAGGTTCCAATGGAGTGTTTATCTGCTAAAACACTAAGTGCAAGGTCATTCAGAAATTTCAGTAGCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACCAAGTCAAGACAACACCATGAAAGGCCGATTACTTTTCCCCAAGAGGAAGCAGTTAATCGATATCCAATTCCAGAAAAGAAAGTGGAAGGGATGACAAAGGATGTTGGAACTCAAAGCACACCACCTGAAAGAAGTTCAACATGTCCTAGCCCTGCTTCCACGCCTCCCATGGTGACATCCTTAAAGGCATGTGGGAAAGAAGAAACTAATTCACCAAATTCTTGTTCTACTCAAACAAAGAAATCAGAGGAAGGGGTGACAATTAAAGCAAGCAAAGAAAAGGAGATGACAAAAGGAGAAAAGGGAGATAGAAACAGTGCAAAGGAGCAAAGGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGACAGATAAACACAAAACAAGAACGAAGAATTTCTTACCTCATTTGAATTTAAAAGGGTGCTGAAAAGTTCCTGAGCAAAATGGCAAAAGGAGATTCTATCTATATTCAGGCATATTTTCCCGGGTGTTAGTGAGGTTTGTGTTCATGTTAAGAAATTAAGGGCAATCATGGAGAGACCTCAGGCCTGCGTAAGAAAGGTTAAGGCTCTTAGTTTCGTGGTTCTCTCTGCTTTAGTTTATTGTTTATTGGGATGGTGAAAGTTGGGAGCAGCTTTATCTTTCTCACTTCACGTGCATGCCTTTTGTCTTTACCTTTAGACAAACAAACCTTTCAATAACTAGGATTACTGATCCAAGTCTAATATTATAGATAA ATGGAGCAGTTTCATTATAGCTCGCAAAGAAGGGAAGAACCAGAGGACTTCAATTTGAGAGAGTGGCCAGTTAAGGGAAGGTTCAAGTGTGAGAACACAAGTTCCAGACGTTTTTCAGGGTCTTATTTAAGAAGCTTAAGGGAAGATGGCAGATCCTTCAGATCAAACATAACCATCTCCAGCACTGCTTCTTCACCAGGCTATTACTCCATGAGAGATGAAATTGACCCATCAACCTACTCATTCACTGCTGCTATCAAAGCATTGCAAGCTAAGTCAAGATATAATATGTGGGAAAGCTTGTCGCCTGATCAGTTTTCTTTGAACTCAAAGTGGTATGAAGCAGAGAAGTATATCTGCAATCCTCTTTCAGGCGAGGTTCCAATGGAGTGTTTATCTGCTAAAACACTAAGTGCAAGGTCATTCAGAAATTTCAGTAGCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACCAAGTCAAGACAACACCATGAAAGGCCGATTACTTTTCCCCAAGAGGAAGCAGTTAATCGATATCCAATTCCAGAAAAGAAAGTGGAAGGGATGACAAAGGATGTTGGAACTCAAAGCACACCACCTGAAAGAAGTTCAACATGTCCTAGCCCTGCTTCCACGCCTCCCATGGTGACATCCTTAAAGGCATGTGGGAAAGAAGAAACTAATTCACCAAATTCTTGTTCTACTCAAACAAAGAAATCAGAGGAAGGGGTGACAATTAAAGCAAGCAAAGAAAAGGAGATGACAAAAGGAGAAAAGGGAGATAGAAACAGTGCAAAGGAGCAAAGGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGACAGATAAACACAAAACAAGAACGAAGAATTTCTTACCTCATTTGAATTTAAAAGGGTGCTGA MEQFHYSSQRREEPEDFNLREWPVKGRFKCENTSSRRFSGSYLRSLREDGRSFRSNITISSTASSPGYYSMRDEIDPSTYSFTAAIKALQAKSRYNMWESLSPDQFSLNSKWYEAEKYICNPLSGEVPMECLSAKTLSARSFRNFSSRITMSAPLVYSTKSRQHHERPITFPQEEAVNRYPIPEKKVEGMTKDVGTQSTPPERSSTCPSPASTPPMVTSLKACGKEETNSPNSCSTQTKKSEEGVTIKASKEKEMTKGEKGDRNSAKEQRWRQGGCLSWMRTRQTDKHKTRTKNFLPHLNLKGC
BLAST of Cp4.1LG01g21970 vs. TrEMBL
Match: A0A0A0KSN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644010 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 2.8e-127 Identity = 244/306 (79.74%), Postives = 263/306 (85.95%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. TrEMBL
Match: A0A061EHB0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 1.1e-83 Identity = 190/310 (61.29%), Postives = 228/310 (73.55%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. TrEMBL
Match: A0A061EIL5_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 8.0e-82 Identity = 190/315 (60.32%), Postives = 228/315 (72.38%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. TrEMBL
Match: A0A067K9Y6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12963 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 5.7e-80 Identity = 188/328 (57.32%), Postives = 228/328 (69.51%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. TrEMBL
Match: D7SMQ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00080 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 9.8e-80 Identity = 189/303 (62.38%), Postives = 224/303 (73.93%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. TAIR10
Match: AT5G16030.3 (AT5G16030.3 unknown protein) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49 Identity = 154/350 (44.00%), Postives = 194/350 (55.43%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. TAIR10
Match: AT3G02500.1 (AT3G02500.1 unknown protein) HSP 1 Score: 181.8 bits (460), Expect = 6.3e-46 Identity = 131/302 (43.38%), Postives = 175/302 (57.95%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. NCBI nr
Match: gi|659119072|ref|XP_008459461.1| (PREDICTED: uncharacterized protein LOC103498590 [Cucumis melo]) HSP 1 Score: 466.8 bits (1200), Expect = 2.8e-128 Identity = 246/306 (80.39%), Postives = 264/306 (86.27%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. NCBI nr
Match: gi|449447486|ref|XP_004141499.1| (PREDICTED: uncharacterized protein LOC101213588 [Cucumis sativus]) HSP 1 Score: 463.0 bits (1190), Expect = 4.0e-127 Identity = 244/306 (79.74%), Postives = 263/306 (85.95%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. NCBI nr
Match: gi|1009127162|ref|XP_015880548.1| (PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba]) HSP 1 Score: 337.0 bits (863), Expect = 3.3e-89 Identity = 195/307 (63.52%), Postives = 230/307 (74.92%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. NCBI nr
Match: gi|645248638|ref|XP_008230386.1| (PREDICTED: uncharacterized protein LOC103329666 [Prunus mume]) HSP 1 Score: 328.2 bits (840), Expect = 1.5e-86 Identity = 190/307 (61.89%), Postives = 229/307 (74.59%), Query Frame = 1
BLAST of Cp4.1LG01g21970 vs. NCBI nr
Match: gi|590653052|ref|XP_007033315.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 318.2 bits (814), Expect = 1.6e-83 Identity = 190/310 (61.29%), Postives = 228/310 (73.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|