Carg02182 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02182
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	LuxR family transcriptional regulator, putative
Location	Cucurbita_argyrosperma_scaffold_007 : 481997 .. 484449 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGTTCCATTATGGTTCACAGAGAAGAGAAGAACCAGATGACTTAAATTTGAGAGAGTGGGCAGTAAGGGCAAGGATGAAGTGTGAGAACACAAATTCCAGAAGGTTTTCAGGGTCATATCTAAGAAGCTTTAGGGAAGAAGATGGGAGATCCTTCAGATCAAACATAACCATCTCTAGCACTGCTTCTTCCCCAGGCTACTACTCCATGAGAGGTACTCTCTCTGTTTTGTGGTTCATATCAGTTTTGACTCTCATATCATCTCATCTTTTGTTTCTTGATTTCTTCTTTGCAGATGAAATTGACCCATCAACCTACTCATTCACTACCGCTCTCAAAGGTAAGACATGTTTGAAAAGGAGTTGCCTGTCTTTGTTTTGAGATTGTGATAGAAAAGGGTTTTTGTGCAGCATTACAATCCAGGTCGAATTATAATAGTTGGGAAAGCTTGTCACCGCCAGAAGGGCTTGCTTTGAACTCAAAGTGGTATGAAGCAGAGAAATATATTTGCAATCCTCTCTCAGGGGAGGTTCCAATGGAGTGTTTATCTGCTAAGTCACTAAGCGCAAGGTCATTCAGAAATTCAAGAACCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACAAATTCCACACAACTCCAGGAAAGGCCAATTACTTTTACACAAATTCCAGGTACCATTTTCTTGCCTTTTTTGTTCCTTTTTTCTTGTAATGTGCTTTGAAAGGTTTCTCAAGTTCATTGTTTAAGATGTAGAAAAGAAAGTGGAAGGGATGACTAAGGATGTGGGAACTCAAAGCACACCGCCTGATAGAAGCTCAACAAGTCCTAGCCCTGCTTCCACGCCTCCCATTAAAGAGAGGTCGTTAAAGGATTGTGGGAAAGAAGAAACTGGTTCATCTACTTCTTATTCCATTCCCGGAAAGAAATCAGAGAAAGTGGTACGTACATTCTTTGATCTTTCAAATGATAATCATGATTAAGTAGAGGGAAGATTCAAACAAATCCAACTAATTAAGAAATCTAGGGAGAAATTTTAGGCTCATTCTCTTCCTCGTTGATTGTGCATTTCTACAAAAAGGGTCGTCAAGATTAGGCTTGACTGATTCAGATCGATGTTCTAACAAGATGGAGAAGTGTAAGATTAAAATTGGGACCACGCTCTTCACATATTCCTGTAGGGCTCTGAACAAGAATATATCAGTATCAGGAGCAAAGCCAATTTCACAAAACATACTTCCAAACTTCCCAACAGTAGTAATCACGACTCTCCACAATGTTATGATATTGTCCACTTTAAGCATAAGCTCTAGTGGCTTTGCTTTTGATTTCCCAAAAAACCTCGTACCAATGGAGATGTATTTCTTAGTTATAAACTCATGATCATTCCTTAAATTAGCTAATTTGGGACTCTCTCCCAACAATTCTCAACACCATCCACCGAAAACTCTTGTACATTTCACTTAACAATCCCACTTACCCAACCGTCCCCACGCTCCTTGCTTTATTGTGGAGCCCATCGAGATTCTTTCCTGCAAAATTCAAAATGGGCTCTCACAGTTTCTGCTGCTTTATGTTGAAAATTCTGCTTTTTTTCTCTCTTTCTGGAAAAAATGGTTATGCATTTGAAGGATATGGTCAAATGCCTAAAATAACGTAACAAAAAATGTCTCAGAATCATTGCATCTGTCATTCATAAAACATCCACATGCTTGTACCTCAATATCTGTTGGTATAATCTCAAAATAAGTCCACAGGTGAAAAGGCCGGGATTCAAGGGAAACACTAGAAGTGAAAAGAAACAAAAGAAGTAGAACGAAAAAACAGTTCTCAAAGGTTATCGTTGAGCACGAGAAGTTGTTAGGAATCACGACTCTCTTCCACAATGATATGATATTGTCCATTTTGAGCATAAGCTCTCGTGGCTTTACTTTGGGCTTTCCCAAAAGACCTCATACGTATAAACCCATGATCATCCCCTAAATTAGTCAACGTGGGACGATTTTGTCTCACTGGTATAATTGAACTGTGATTCAACTACTGCCCTTAATATTGGCTAATCTTCTCATTTAAGGCATAAATTTTGATTCCAACACAGAGATATTGCATCTTAAACCCCAGTTGTTAAAGTAAAGTTTGAGGCATTTTCTACAAACGCCCATGAGGAAATGTTTACAGATGACAATGCCTAAAGTAGCAAATAAAAGAGATATCCCATTGTGTTCAGATATTCATACAGAACAGTGATGAGTGTAATATGAGTGCAGGTGAGAAGTAAAGCAAGCAAAGAAAAGGAGATGCCAAAAGGAGAAAAGGGAGATAGAAACAGTACAAAGGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGGGATAAACACAAAACAAGAAAGAACAACTTTTTACCTCATTTGAAAGGGTGCTGA

mRNA sequence

ATGGAGCAGTTCCATTATGGTTCACAGAGAAGAGAAGAACCAGATGACTTAAATTTGAGAGAGTGGGCAGTAAGGGCAAGGATGAAGTGTGAGAACACAAATTCCAGAAGGTTTTCAGGGTCATATCTAAGAAGCTTTAGGGAAGAAGATGGGAGATCCTTCAGATCAAACATAACCATCTCTAGCACTGCTTCTTCCCCAGGCTACTACTCCATGAGAGATGAAATTGACCCATCAACCTACTCATTCACTACCGCTCTCAAAGCATTACAATCCAGGTCGAATTATAATAGTTGGGAAAGCTTGTCACCGCCAGAAGGGCTTGCTTTGAACTCAAAGTGGTATGAAGCAGAGAAATATATTTGCAATCCTCTCTCAGGGGAGGTTCCAATGGAGTGTTTATCTGCTAAGTCACTAAGCGCAAGGTCATTCAGAAATTCAAGAACCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACAAATTCCACACAACTCCAGGAAAGGCCAATTACTTTTACACAAATTCCAGAAAAGAAAGTGGAAGGGATGACTAAGGATGTGGGAACTCAAAGCACACCGCCTGATAGAAGCTCAACAAGTCCTAGCCCTGCTTCCACGCCTCCCATTAAAGAGAGGTCGTTAAAGGATTGTGGGAAAGAAGAAACTGGTTCATCTACTTCTTATTCCATTCCCGGAAAGAAATCAGAGAAAGTGGTGAGAAGTAAAGCAAGCAAAGAAAAGGAGATGCCAAAAGGAGAAAAGGGAGATAGAAACAGTACAAAGGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGGGATAAACACAAAACAAGAAAGAACAACTTTTTACCTCATTTGAAAGGGTGCTGA

Coding sequence (CDS)

ATGGAGCAGTTCCATTATGGTTCACAGAGAAGAGAAGAACCAGATGACTTAAATTTGAGAGAGTGGGCAGTAAGGGCAAGGATGAAGTGTGAGAACACAAATTCCAGAAGGTTTTCAGGGTCATATCTAAGAAGCTTTAGGGAAGAAGATGGGAGATCCTTCAGATCAAACATAACCATCTCTAGCACTGCTTCTTCCCCAGGCTACTACTCCATGAGAGATGAAATTGACCCATCAACCTACTCATTCACTACCGCTCTCAAAGCATTACAATCCAGGTCGAATTATAATAGTTGGGAAAGCTTGTCACCGCCAGAAGGGCTTGCTTTGAACTCAAAGTGGTATGAAGCAGAGAAATATATTTGCAATCCTCTCTCAGGGGAGGTTCCAATGGAGTGTTTATCTGCTAAGTCACTAAGCGCAAGGTCATTCAGAAATTCAAGAACCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACAAATTCCACACAACTCCAGGAAAGGCCAATTACTTTTACACAAATTCCAGAAAAGAAAGTGGAAGGGATGACTAAGGATGTGGGAACTCAAAGCACACCGCCTGATAGAAGCTCAACAAGTCCTAGCCCTGCTTCCACGCCTCCCATTAAAGAGAGGTCGTTAAAGGATTGTGGGAAAGAAGAAACTGGTTCATCTACTTCTTATTCCATTCCCGGAAAGAAATCAGAGAAAGTGGTGAGAAGTAAAGCAAGCAAAGAAAAGGAGATGCCAAAAGGAGAAAAGGGAGATAGAAACAGTACAAAGGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGGGATAAACACAAAACAAGAAAGAACAACTTTTTACCTCATTTGAAAGGGTGCTGA

Protein sequence

MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITISSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKYICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPEKKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGKKSEKVVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC

Homology

[Close]

BLAST of Carg02182 vs. NCBI nr
Match: XP_022939095.1 (uncharacterized protein LOC111445097 isoform X2 [Cucurbita moschata])

HSP 1 Score: 573.9 bits (1478), Expect = 3.1e-160
Identity = 294/297 (98.99%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI
Sbjct: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY
Sbjct: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPEKK 180
           ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPEKK
Sbjct: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPEKK 180

Query: 181 VEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGKKSEKVV 240
           VEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSS SYSIP KKSEKVV
Sbjct: 181 VEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEKVV 240

Query: 241 RSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 298
           RSKASKEKEMPKGEK DRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC
Sbjct: 241 RSKASKEKEMPKGEKEDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 297

[Close]

BLAST of Carg02182 vs. NCBI nr
Match: XP_023550450.1 (uncharacterized protein LOC111808597 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572.0 bits (1473), Expect = 1.2e-159
Identity = 295/299 (98.66%), Postives = 295/299 (98.66%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI
Sbjct: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY
Sbjct: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIP--E 180
           ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIP  E
Sbjct: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPDVE 180

Query: 181 KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGKKSEK 240
           KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSS SYSIP KKSEK
Sbjct: 181 KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEK 240

Query: 241 VVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 298
           VVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC
Sbjct: 241 VVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 299

[Close]

BLAST of Carg02182 vs. NCBI nr
Match: XP_022993232.1 (uncharacterized protein LOC111489313 isoform X2 [Cucurbita maxima])

HSP 1 Score: 570.1 bits (1468), Expect = 4.4e-159
Identity = 292/297 (98.32%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQ HYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI
Sbjct: 1   MEQVHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY
Sbjct: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPEKK 180
           ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPEKK
Sbjct: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPEKK 180

Query: 181 VEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGKKSEKVV 240
           VEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLK+CGKEETGSS SYSIP  KSEKVV
Sbjct: 181 VEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKNCGKEETGSSNSYSIPRTKSEKVV 240

Query: 241 RSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 298
           RSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC
Sbjct: 241 RSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 297

[Close]

BLAST of Carg02182 vs. NCBI nr
Match: XP_022939094.1 (uncharacterized protein LOC111445097 isoform X1 [Cucurbita moschata])

HSP 1 Score: 568.9 bits (1465), Expect = 9.9e-159
Identity = 294/299 (98.33%), Postives = 294/299 (98.33%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI
Sbjct: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY
Sbjct: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIP--E 180
           ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIP  E
Sbjct: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPDVE 180

Query: 181 KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGKKSEK 240
           KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSS SYSIP KKSEK
Sbjct: 181 KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSNSYSIPRKKSEK 240

Query: 241 VVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 298
           VVRSKASKEKEMPKGEK DRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC
Sbjct: 241 VVRSKASKEKEMPKGEKEDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 299

[Close]

BLAST of Carg02182 vs. NCBI nr
Match: XP_022993231.1 (uncharacterized protein LOC111489313 isoform X1 [Cucurbita maxima])

HSP 1 Score: 565.1 bits (1455), Expect = 1.4e-157
Identity = 292/299 (97.66%), Postives = 293/299 (97.99%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQ HYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI
Sbjct: 1   MEQVHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY
Sbjct: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIP--E 180
           ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIP  E
Sbjct: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQIPDVE 180

Query: 181 KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGKKSEK 240
           KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLK+CGKEETGSS SYSIP  KSEK
Sbjct: 181 KKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKNCGKEETGSSNSYSIPRTKSEK 240

Query: 241 VVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 298
           VVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC
Sbjct: 241 VVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFLPHLKGC 299

[Close]

BLAST of Carg02182 vs. TAIR10
Match: AT5G16030.3 (unknown protein)

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-49
Identity = 131/240 (54.58%), Postives = 157/240 (65.42%), Query Frame = 0


Query: 10  RREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGR-SFRSN--ITISSTASS 69
           R +E + +NLREW  RAR+  EN +SRRFS SY+ SFRE+  + SFR+     ISSTASS
Sbjct: 4   RGDEHEFMNLREWDRRARLIRENPSSRRFSASYIGSFREDHHKSSFRTTNFNNISSTASS 63

Query: 70  PGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKYICNPLS 129
           PG Y++++EIDPSTYSFT ALKALQ+++ YN+ E L+  EG ALNSKW EAEKYICNPLS
Sbjct: 64  PG-YTLKEEIDPSTYSFTNALKALQAKTMYNNREWLA-QEGFALNSKWNEAEKYICNPLS 123

Query: 130 GEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQL----QERPITFTQI------ 189
           GEVPMECLSAK+LSARSFRN     TMSAPL + + +  +    Q +P     +      
Sbjct: 124 GEVPMECLSAKTLSARSFRNLS---TMSAPLHFPSPNPLMNNIAQNKPNNNPNVRVIHED 183

Query: 190 -------------------PEKKVEGMTKDVGTQSTPP-DRSSTSPSPASTPPIKERSLK 217
                               EKKV GM +DVG QST   D SS SPSPA TPPI ERSLK
Sbjct: 184 LYAPDPELLALVNYGGVFLAEKKVVGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLK 238

[Close]

BLAST of Carg02182 vs. TAIR10
Match: AT3G02500.1 (unknown protein)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-38
Identity = 125/300 (41.67%), Postives = 168/300 (56.00%), Query Frame = 0


Query: 11  REEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITISSTASSPGYY 70
           R E  + NLREWA +  +  E+ +SRRFS S +RSFR ED +S  +N+TISSTASSPG Y
Sbjct: 4   RGEELEFNLREWARQGHLTREDQSSRRFSASCIRSFR-EDHKSCTTNVTISSTASSPG-Y 63

Query: 71  SMRDEIDPSTYSFTTALKALQSRSNY-NSWESLSPPEGLALNSKWYEAEKYICNPLSGEV 130
           S++DEIDPS YSF++ALKALQ++S Y  +W+ L  PEG+ LNSKW EAEKYICNPLSGEV
Sbjct: 64  SLKDEIDPSNYSFSSALKALQAKSVYKKNWDWLK-PEGVELNSKWNEAEKYICNPLSGEV 123

Query: 131 PMECLSAKSLSARSFRNSRTRIT--MSAPLVYSTNSTQLQERPITFTQ----------IP 190
           P+ECLS+K+L++RSFRN  T+    M  P  Y+ N  +     +              I 
Sbjct: 124 PLECLSSKTLNSRSFRNLSTKHAPLMILPSNYNLNIPRTVNPKVRIIHEDPRSPDPVLIQ 183

Query: 191 EKKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLK-DCGKEETGSSTSYSIPGKKS 250
           +KKV G  +DV +       +  + S A T PI ER  K   G ++  S   Y++  K  
Sbjct: 184 DKKVVGSKRDVVS-------AQGNVSAAKTTPIMERLTKRQVGADD--SPVEYALKLKAQ 243

Query: 251 EKVVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNF--LPHL 295
           ++ V  K  + +                     G  SW+R  QR   K++      LPHL
Sbjct: 244 QEDV--KLEENEXXXXXXXXXXXXXXXXXXXXSGFSSWIRKMQRQPRKSKCIFLICLPHL 289

[Close]

BLAST of Carg02182 vs. TrEMBL
Match: tr|A0A0A0KSN4|A0A0A0KSN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644010 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 4.3e-134
Identity = 261/306 (85.29%), Postives = 275/306 (89.87%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQFHYGSQRREE D+LNLREW VRAR+K ENT+SRRFSGSY+RSF  EDGRSFRSN+TI
Sbjct: 1   MEQFHYGSQRREEADELNLREWPVRARIKRENTSSRRFSGSYIRSF-GEDGRSFRSNLTI 60

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPG YSMRDEIDPSTYSFTTALKALQ+RS+YNSWESLS PEG ALNSKWYEAEKY
Sbjct: 61  SSTASSPGCYSMRDEIDPSTYSFTTALKALQARSSYNSWESLS-PEGFALNSKWYEAEKY 120

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQ----- 180
           ICNPLSGEVPMECLSAK+LSARSFRN RTRITMSAPLVYSTNS Q+QERPI+F Q     
Sbjct: 121 ICNPLSGEVPMECLSAKTLSARSFRNFRTRITMSAPLVYSTNSRQIQERPISFPQEEAIH 180

Query: 181 ---IPEKKVEGM-TKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSI 240
              IPEKK+EGM TKDVGTQSTPPDRSSTSPSPASTPPIKERSLK+CGKE+TGSS SYSI
Sbjct: 181 HYPIPEKKMEGMRTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKECGKEQTGSSKSYSI 240

Query: 241 PGKKSEKVVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFL 298
           P KK EKVV  KA KEKE+ K EKGDRNST EQTW QGGCLSWMRTRQRDKHKTRK NFL
Sbjct: 241 PKKKLEKVVTIKARKEKEVTKEEKGDRNSTNEQTWSQGGCLSWMRTRQRDKHKTRKKNFL 300

[Close]

BLAST of Carg02182 vs. TrEMBL
Match: tr|A0A1S3CBG4|A0A1S3CBG4_CUCME (uncharacterized protein LOC103498590 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498590 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 3.2e-129
Identity = 254/306 (83.01%), Postives = 268/306 (87.58%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQFHYGSQRREE D+LNLREW VRAR+K ENT+SRRFSGS +RSFR EDGRSFRSN+TI
Sbjct: 1   MEQFHYGSQRREEADELNLREWPVRARIKRENTSSRRFSGSNIRSFR-EDGRSFRSNLTI 60

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPG YSMRDEIDPSTYSFTTALKALQ+RS+YNSWESLS PEG ALNSKWYEAEKY
Sbjct: 61  SSTASSPGCYSMRDEIDPSTYSFTTALKALQARSSYNSWESLS-PEGFALNSKWYEAEKY 120

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYSTNSTQLQERPITFTQ----- 180
           ICNPLSGEVPMECLSAK+LSARSFRN RTRITMSAPLVYSTNS Q+QERPI+F Q     
Sbjct: 121 ICNPLSGEVPMECLSAKTLSARSFRNFRTRITMSAPLVYSTNSRQIQERPISFPQEEAIN 180

Query: 181 ---IPEKKVEGM-TKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSI 240
              IPEKK++GM TKDVGTQSTPPDRSSTSPSPASTPPIKERSLK+CGKE+TGSS SYSI
Sbjct: 181 HYPIPEKKMDGMRTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKECGKEQTGSSNSYSI 240

Query: 241 PGKKSEKVVRSKASKEKEMPKGEKGDRNSTKEQTWRQGGCLSWMRTRQRDKHKTRKNNFL 298
           P KK EKVV  KA KE         DRNST EQTW QGGCLSWMRTRQRDKHKTRK NFL
Sbjct: 241 PKKKLEKVVTIKARKEXXXXXXXXXDRNSTNEQTWSQGGCLSWMRTRQRDKHKTRKKNFL 300

[Close]

BLAST of Carg02182 vs. TrEMBL
Match: tr|A0A1S4E398|A0A1S4E398_CUCME (uncharacterized protein LOC103498590 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498590 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 6.8e-124
Identity = 254/341 (74.49%), Postives = 268/341 (78.59%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           MEQFHYGSQRREE D+LNLREW VRAR+K ENT+SRRFSGS +RSFR EDGRSFRSN+TI
Sbjct: 1   MEQFHYGSQRREEADELNLREWPVRARIKRENTSSRRFSGSNIRSFR-EDGRSFRSNLTI 60

Query: 61  SSTASSPGYYSMR-----------------------------------DEIDPSTYSFTT 120
           SSTASSPG YSMR                                   DEIDPSTYSFTT
Sbjct: 61  SSTASSPGCYSMRGTSLFFCFNSVFFFSFSCHGFSLILIFLFLGLFCIDEIDPSTYSFTT 120

Query: 121 ALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKYICNPLSGEVPMECLSAKSLSARSFR 180
           ALKALQ+RS+YNSWESLS PEG ALNSKWYEAEKYICNPLSGEVPMECLSAK+LSARSFR
Sbjct: 121 ALKALQARSSYNSWESLS-PEGFALNSKWYEAEKYICNPLSGEVPMECLSAKTLSARSFR 180

Query: 181 NSRTRITMSAPLVYSTNSTQLQERPITFTQ--------IPEKKVEGM-TKDVGTQSTPPD 240
           N RTRITMSAPLVYSTNS Q+QERPI+F Q        IPEKK++GM TKDVGTQSTPPD
Sbjct: 181 NFRTRITMSAPLVYSTNSRQIQERPISFPQEEAINHYPIPEKKMDGMRTKDVGTQSTPPD 240

Query: 241 RSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGKKSEKVVRSKASKEKEMPKGEKG 298
           RSSTSPSPASTPPIKERSLK+CGKE+TGSS SYSIP KK EKVV  KA KE         
Sbjct: 241 RSSTSPSPASTPPIKERSLKECGKEQTGSSNSYSIPKKKLEKVVTIKARKEXXXXXXXXX 300

[Close]

BLAST of Carg02182 vs. TrEMBL
Match: tr|A0A061EHB0|A0A061EHB0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019503 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 188/307 (61.24%), Postives = 222/307 (72.31%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           +EQ  Y S+R +EP + NLREW ++AR+  ENT SRR+S SY+RSFR ED RSFRSNITI
Sbjct: 5   VEQSSYSSRRHDEP-EFNLREWGLKARISRENTTSRRYSASYIRSFR-EDARSFRSNITI 64

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPG YS++DEIDPSTYSFTTALKALQ+R+  + WE LS P+G ALNSKW EAEKY
Sbjct: 65  SSTASSPG-YSLKDEIDPSTYSFTTALKALQARTVCSGWECLS-PDGFALNSKWNEAEKY 124

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYS------TNSTQLQERPITFT 180
           ICNPLSGEVPMECLSAK+LS RSFRN   RITMSAPLVYS      TN ++     +   
Sbjct: 125 ICNPLSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVYSHSCHIQTNPSRTVPEDVAQF 184

Query: 181 QIPEKKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSYSIPGK 240
             PEKK E MT+DVGTQSTPPD SS S SPASTP I ER+LK CG E   S  + + P  
Sbjct: 185 PTPEKKAESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTNTKP-- 244

Query: 241 KSEKVVRSKASKEKEMPKGEKGDRNSTKE---QTWRQGGCLSWMRTRQRDKHKTRKNN-F 298
           ++E+ V  K + E+E    +K +R    E   +  RQ GCLSWMR RQR+KHK+RK + F
Sbjct: 245 RAEEQVEVKETGEREETIIDKAERRRKDELMCRCSRQPGCLSWMRRRQREKHKSRKRSIF 304

[Close]

BLAST of Carg02182 vs. TrEMBL
Match: tr|A0A061EIL5|A0A061EIL5_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_019503 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80
Identity = 189/312 (60.58%), Postives = 224/312 (71.79%), Query Frame = 0


Query: 1   MEQFHYGSQRREEPDDLNLREWAVRARMKCENTNSRRFSGSYLRSFREEDGRSFRSNITI 60
           +EQ  Y S+R +EP + NLREW ++AR+  ENT SRR+S SY+RSFR ED RSFRSNITI
Sbjct: 5   VEQSSYSSRRHDEP-EFNLREWGLKARISRENTTSRRYSASYIRSFR-EDARSFRSNITI 64

Query: 61  SSTASSPGYYSMRDEIDPSTYSFTTALKALQSRSNYNSWESLSPPEGLALNSKWYEAEKY 120
           SSTASSPG YS++DEIDPSTYSFTTALKALQ+R+  + WE LS P+G ALNSKW EAEKY
Sbjct: 65  SSTASSPG-YSLKDEIDPSTYSFTTALKALQARTVCSGWECLS-PDGFALNSKWNEAEKY 124

Query: 121 ICNPLSGEVPMECLSAKSLSARSFRNSRTRITMSAPLVYS------TNSTQ-----LQER 180
           ICNPLSGEVPMECLSAK+LS RSFRN   RITMSAPLVYS      TN ++     + + 
Sbjct: 125 ICNPLSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVYSHSCHIQTNPSRTVPEDVAQF 184

Query: 181 PITFTQIPEKKVEGMTKDVGTQSTPPDRSSTSPSPASTPPIKERSLKDCGKEETGSSTSY 240
           P     I EKK E MT+DVGTQSTPPD SS S SPASTP I ER+LK CG E   S  + 
Sbjct: 185 PTPVHLIAEKKAESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTN 244

Query: 241 SIPGKKSEKVVRSKASKEKEMPKGEKGDRNSTKE---QTWRQGGCLSWMRTRQRDKHKTR 298
           + P  ++E+ V  K + E+E    +K +R    E   +  RQ GCLSWMR RQR+KHK+R
Sbjct: 245 TKP--RAEEQVEVKETGEREETIIDKAERRRKDELMCRCSRQPGCLSWMRRRQREKHKSR 304

The following BLAST results are available for this feature:

BLAST of Carg02182 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939095.1	3.1e-160	98.99	uncharacterized protein LOC111445097 isoform X2 [Cucurbita moschata]	[more]
XP_023550450.1	1.2e-159	98.66	uncharacterized protein LOC111808597 [Cucurbita pepo subsp. pepo]	[more]
XP_022993232.1	4.4e-159	98.32	uncharacterized protein LOC111489313 isoform X2 [Cucurbita maxima]	[more]
XP_022939094.1	9.9e-159	98.33	uncharacterized protein LOC111445097 isoform X1 [Cucurbita moschata]	[more]
XP_022993231.1	1.4e-157	97.66	uncharacterized protein LOC111489313 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg02182 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16030.3	4.6e-49	54.58	unknown protein	[more]
AT3G02500.1	2.1e-38	41.67	unknown protein	[more]

BLAST of Carg02182 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg02182 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KSN4\|A0A0A0KSN4_CUCSA	4.3e-134	85.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644010 PE=4 SV=1	[more]
tr\|A0A1S3CBG4\|A0A1S3CBG4_CUCME	3.2e-129	83.01	uncharacterized protein LOC103498590 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4E398\|A0A1S4E398_CUCME	6.8e-124	74.49	uncharacterized protein LOC103498590 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A061EHB0\|A0A061EHB0_THECC	1.1e-81	61.24	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019503 PE=4 ...	[more]
tr\|A0A061EIL5\|A0A061EIL5_THECC	2.7e-80	60.58	Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_019503 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02182-RA	Carg02182-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..262
None	No IPR available	PANTHER	PTHR36748	FAMILY NOT NAMED	coord: 7..297

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02182	Cla016454	Watermelon (97103) v1	carwmB0260
Carg02182	Csa5G644010	Cucumber (Chinese Long) v2	carcuB0293
Carg02182	MELO3C022089	Melon (DHL92) v3.5.1	carmeB0260
Carg02182	ClCG11G005360	Watermelon (Charleston Gray)	carwcgB0255
Carg02182	CSPI05G30010	Wild cucumber (PI 183967)	carcpiB0297
Carg02182	Cucsa.238110	Cucumber (Gy14) v1	carcgyB0316
Carg02182	CmaCh04G028460	Cucurbita maxima (Rimu)	carcmaB0374
Carg02182	CmaCh01G003960	Cucurbita maxima (Rimu)	carcmaB0365
Carg02182	CmaCh15G001910	Cucurbita maxima (Rimu)	carcmaB0362
Carg02182	CmoCh15G002040	Cucurbita moschata (Rifu)	carcmoB0362
Carg02182	CmoCh04G029750	Cucurbita moschata (Rifu)	carcmoB0370
Carg02182	Lsi03G002300	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02182	Cp4.1LG13g07720	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02182	Cp4.1LG01g21970	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02182	CsGy5G029400	Cucumber (Gy14) v2	carcgybB0280
Carg02182	MELO3C022089.2	Melon (DHL92) v3.6.1	carmedB0270
Carg02182	CsaV3_5G039140	Cucumber (Chinese Long) v3	carcucB0296
Carg02182	Cla97C11G212300	Watermelon (97103) v2	carwmbB0269
Carg02182	Bhi06G000084	Wax gourd	carwgoB0342

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02182	Carg05922	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02182	Melon (DHL92) v3.5.1	carmeB0262
Carg02182	Melon (DHL92) v3.6.1	carmedB0273
Carg02182	Watermelon (97103) v2	carwmbB0274
Carg02182	Wax gourd	carwgoB0339
Carg02182	Wax gourd	carwgoB0353