Cp4.1LG13g01870 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g01870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Homeobox protein knotted-1, putative
Location	Cp4.1LG13 : 1447129 .. 1451193 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTGACCCCTTTGCCATAACACAAAACAAATTCTCTTTCTCTCTCTTGTTCTTCTTCTTCTTCTTCTTCCTCTGTTTGTACAATTTTCTGAAATTCTCAGAGGTGTTGCAGAAAGTTTTGTCTCGGATCCCTATATACTCCTCTCTTTCTCTCTCTCTCTCTTCTTCTTCTTCTTCATTTCACTCCATTAACGACAAACTGTCTCTTATTCATCATCAAATTCGATCAAAATTGAATCCCAACAATTTCCACTATCGATCTCACCTCGCGGCTTCTGTTCTTTCTAATTACTGTTGTTTTTTGTGTTAATTTTACTCTACTGCGGGTTTTGTGGGGGTTTGAAATGCAAGAAGCTGGGTTGGGAATCATGAATGCTGGTGTGTCTAGCGGTGATGTTTTGGTTTCCGGTGAGGGGGTTCATAATGCCCAACTCAAGGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCCGCTCATGTTGCTTGTCTTCGTGTTGCTACGCCGATTGATAAGCTTCCGATGATCGATGCTCAGCTTTCTCAATCGCATCATGTTTTGCGCTCTTATGCTTCTTCTCATCAAAATGCTCATTCCTTGTCGCCTCATGACCGCCAGGAACTCGACAATTTTCTGGTGATTTTGTTTTTCATTTGGTTGAGAGTCTTGCTTGTTTTGTGTTCTGGGTTGAAATTGGGTTTCATTTTATGATGGATTCTTTTTTTGTTGTTCAGGCTCAGTATATGATCGTTTTGTGCTCTTTCAAAGATCAGCTTCAACAGCATGTGAGATTTCACGCAGTGGAGGCTGTTATGGCCTGCCGTGAAATTGAAAGTACTCTACAAGCTCTAACAGGTATATAGCTCATGTCTGTTCTTTTAAAAACCCACTTGAAATCCAATAAAGAAAAACGAAGCGAAACCCATGATTTGAACTTAGATATGGATTCTTTGTGTTATAGTATTGAAGTTATAACTTAGAACCCGTTTGAATTTGGAAGCATTTGGGGAGATGGGGTAAGGAAGTAAATAGGAGTAATTTGAAAGGGAAGGGTATAGGGGGTTGGTTTTGGGGTTTGAAGGATGAAGGACACTGTGAGAGCAGGCATGGAAGGGTTCTTACTTGGACATACCAAGATTGTAGTTGGGTTTGGTGAGGACACCAACCGATAAGGTTGCTTGCCTTGCCAATATTTGTTCCACTCTATACAATATTAATATTCTTCCTATTATTATACTTGTTCATCTTTTTGCTTTGTAAGGATAGTGCATGAACCTAGCTAGCTACTCCTTTTCCTCTCTCTATTCTATGTGTGTATGTACATATGAACCGTCCAACGCTACTCAGATTTTGTTTTTTTTAAGCTTTTACTTTCGGACTTTTTTTAAAACGCGTCTAGGTAGAAGTTTCCACATCTTTGTAAAGAATGTTTCGTTCCCCTCTCCAACCAATATGAGATCTCAACCCACCCCCTTGGAGGCCAGAGTCCTAGTTGCCACACCACTAAGTTGTCTAGCTCTGATATCATTTGTAATAACTCAAGCTTAATGTTATCAGATATTGTCCATTTTGCCATATTACATATCGTCGTCTGCCTCATGATTTTAAAATACGTCTACTAGAGAGAGGTTTCCACACTTTTATAAGGAATAATTCATTCCCCTCTCCAACCGATGTGGTATCTCCAGCGTACTTGCTGGCACACTGCCCGATGTCTAGCTTTTATACTATTTGTAATAGCTCAAGTCCACCGCTATCCGATATTGTTCTCTTTGTGCTTTCCCTTTTGGGCTTCCCCTCAAAGTTTTTAAAACGTGTGATAGATTGTCGTACCCTTATAAATAATATTTTGTTTCACTCTCCAATCAGTGTGGGTCTCCCAACATATATAGATGGTAAGAGCTACACTCACCCTGTATTCACCTTAATCACCAATGGGTCCTTTTTAATCATTCAAGTGGCCTAATATTTTTGAGGATATCGATATACCCAACCTAGTGAACTTTTTAGTTACATGATTAACGAAACAATTTGCTGAAAGTGTTGCCATCGAAGTAGTTGATTGGGAGGATTAAAGGAAGTAGACATGTTATCATAAAGTAATCTGTTGCTTATTGATAGGTTTGCCAGTTTTAGACCTGTCCACCTATAATGGTCCCTAGGTTCTCAATTTATATACCGCCATGTTGCTCATGATCAGTTATTTTGCTTTGTAGAACACATAGAAACTATTCATTACTGTGTCTGCCAATGGGGTGCTGCTGAGGACCTAAGGGCTGTGGTGTAGGGTTTAAGTGCCTACACAAGCTTTTATATAAAGGACCCTATGCCGCCTAAAGGGCATTGGAGGCTCATCCTGACAGTATTTAACTAAATGGCTATACTTTAGGCAGCTTTTTTGGTCTGCTAAATTTGGATCGGTTAGAAAAAGAGCCCAACATTTGGTAAACAAGTCAAACAAGTTATTACTATCATTCAAAATGTTTAGGCATTTAAGTCGTCCTTTTTTAGCGGGAGATTCAATTTTTCTCTTCCTCTAAGATTCTACCTCGATTGGAAGAGAAACAAAACATTCTTTATAAGTGTGTGAGCCTCTAGCTAATAGACGTGTTCTAGAACCATGAGACTGTTGGTGGGCTTGAGACGTTACAATTACGGGTCAAAGCGGACAATATCTACTAACGGTGAGCTTGAGACGTTACAAATAGAATCAGAACCAGACACCGAGCTGTGTGCTAGTGAGGACGCTGACCTTTATGGGGGTGGATTGTGAGATATCACATCGGTTGGAGAGGAGAACGAAACATTTATAAAGGTGTAGAAATCTCTCTTTAGTAGACACGTTTTAAAACTTCAAGCGCGATACGTAACGAGGCCAAAGCGAATAATATTGGCTAGTGGTGGACTTTAGTGGTTACCATTTCTGAAACTTACCCTACTTAAGTAAATTCAGCTGGGTTTTTCTTTTTCTGTANGGGGGGGGGGGGGGGGGTTGTTGCTGCTTTGATGAAAGTTTGGACTCTTGAAAATTTGAAGTATTTCCCATTACCAAACATGTATTGATAATAAGGGTTGAAGTGCCTTTTACCAACTTCGTATGCTATTTAACATGTTCCTTCAGGAGTAAACCTTGATGAAGGCACCGGTTTAACAATGTCCGACAATGACGACGACGACGTTCCAATGGATTTCGCACTCGATCAATCTAGCACTGATGCACACGACATGATGGGGTTCGGGCCGCTGCTTCCGACCGAATCCGAAAGATCATTAATGGAGAGAGTTCGACAAGAACTAAAGATTGAGCTGAAACAGGTTCTCTTTTTCCCATTACATTGGAGATTAAGAGGGAAAAACAAAGAACTAATGGAGGAACATGTTTTGTAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAAAGAAGGGCAGGGAAGCTACCTGGGGATACAACTACAGTTTTAAAGAACTGGTGGCAGCAACATTCTAAGTGGCCTTACCCAACTGTAAGTACTAAACAAACAAACGAACAAACGAACAAAACAACCCTCTTTTCGTTTCGAAACGATGAATTCTAAGTTCGAATCTTTACAACGTCACTCGTCTTCCCGATTTTCAGGAAGACGACAAGTCGAAGCTGGTGGAGGAGACGGGTTTACAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATTCTTGAAGTCCAAGCGCAAGAGATAATAAAAACAACAAATTTCATCAAATTATATGAAATATTTTTATAGCTTTGGGAAAAAGTTCCGACAAAAAGAGTGACAGAAACATAGGATTAAGAACATTGTGACAGAGATTGGATTAACATGTCTTTTGTTTAAGGTTGTAAATTGTTCCTTTTTAACACATCAAATTCAATGCAAAAGGAAAAATAAGTGAATATTAAAGAGATAAATAATTTAATTAATGGTTTGGAAATTAGGTTTATCCTGAAAATATAATTTATTTACTATTTTCTTTCAATTACAATGAAA

mRNA sequence

CAGTGACCCCTTTGCCATAACACAAAACAAATTCTCTTTCTCTCTCTTGTTCTTCTTCTTCTTCTTCTTCCTCTGTTTGTACAATTTTCTGAAATTCTCAGAGGTGTTGCAGAAAGTTTTGTCTCGGATCCCTATATACTCCTCTCTTTCTCTCTCTCTCTCTTCTTCTTCTTCTTCATTTCACTCCATTAACGACAAACTGTCTCTTATTCATCATCAAATTCGATCAAAATTGAATCCCAACAATTTCCACTATCGATCTCACCTCGCGGCTTCTGTTCTTTCTAATTACTGTTGTTTTTTGTGTTAATTTTACTCTACTGCGGGTTTTGTGGGGGTTTGAAATGCAAGAAGCTGGGTTGGGAATCATGAATGCTGGTGTGTCTAGCGGTGATGTTTTGGTTTCCGGTGAGGGGGTTCATAATGCCCAACTCAAGGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCCGCTCATGTTGCTTGTCTTCGTGTTGCTACGCCGATTGATAAGCTTCCGATGATCGATGCTCAGCTTTCTCAATCGCATCATGTTTTGCGCTCTTATGCTTCTTCTCATCAAAATGCTCATTCCTTGTCGCCTCATGACCGCCAGGAACTCGACAATTTTCTGGCTCAGTATATGATCGTTTTGTGCTCTTTCAAAGATCAGCTTCAACAGCATGTGAGATTTCACGCAGTGGAGGCTGTTATGGCCTGCCGTGAAATTGAAAGTACTCTACAAGCTCTAACAGGAGTAAACCTTGATGAAGGCACCGGTTTAACAATGTCCGACAATGACGACGACGACGTTCCAATGGATTTCGCACTCGATCAATCTAGCACTGATGCACACGACATGATGGGGTTCGGGCCGCTGCTTCCGACCGAATCCGAAAGATCATTAATGGAGAGAGTTCGACAAGAACTAAAGATTGAGCTGAAACAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAAAGAAGGGCAGGGAAGCTACCTGGGGATACAACTACAGTTTTAAAGAACTGGTGGCAGCAACATTCTAAGTGGCCTTACCCAACTGTAAGAAGACGACAAGTCGAAGCTGGTGGAGGAGACGGGTTTACAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATTCTTGAAGTCCAAGCGCAAGAGATAATAAAAACAACAAATTTCATCAAATTATATGAAATATTTTTATAGCTTTGGGAAAAAGTTCCGACAAAAAGAGTGACAGAAACATAGGATTAAGAACATTGTGACAGAGATTGGATTAACATGTCTTTTGTTTAAGGTTGTAAATTGTTCCTTTTTAACACATCAAATTCAATGCAAAAGGAAAAATAAGTGAATATTAAAGAGATAAATAATTTAATTAATGGTTTGGAAATTAGGTTTATCCTGAAAATATAATTTATTTACTATTTTCTTTCAATTACAATGAAA

Coding sequence (CDS)

ATGCAAGAAGCTGGGTTGGGAATCATGAATGCTGGTGTGTCTAGCGGTGATGTTTTGGTTTCCGGTGAGGGGGTTCATAATGCCCAACTCAAGGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCCGCTCATGTTGCTTGTCTTCGTGTTGCTACGCCGATTGATAAGCTTCCGATGATCGATGCTCAGCTTTCTCAATCGCATCATGTTTTGCGCTCTTATGCTTCTTCTCATCAAAATGCTCATTCCTTGTCGCCTCATGACCGCCAGGAACTCGACAATTTTCTGGCTCAGTATATGATCGTTTTGTGCTCTTTCAAAGATCAGCTTCAACAGCATGTGAGATTTCACGCAGTGGAGGCTGTTATGGCCTGCCGTGAAATTGAAAGTACTCTACAAGCTCTAACAGGAGTAAACCTTGATGAAGGCACCGGTTTAACAATGTCCGACAATGACGACGACGACGTTCCAATGGATTTCGCACTCGATCAATCTAGCACTGATGCACACGACATGATGGGGTTCGGGCCGCTGCTTCCGACCGAATCCGAAAGATCATTAATGGAGAGAGTTCGACAAGAACTAAAGATTGAGCTGAAACAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAAAGAAGGGCAGGGAAGCTACCTGGGGATACAACTACAGTTTTAAAGAACTGGTGGCAGCAACATTCTAAGTGGCCTTACCCAACTGTAAGAAGACGACAAGTCGAAGCTGGTGGAGGAGACGGGTTTACAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATTCTTGAAGTCCAAGCGCAAGAGATAATAAAAACAACAAATTTCATCAAATTATATGAAATATTTTTATAG

Protein sequence

MQEAGLGIMNAGVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTVRRRQVEAGGGDGFTAETNKQLVHQPKEEKLAQQLSVSDILEVQAQEIIKTTNFIKLYEIFL

Homology

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BLAST of Cp4.1LG13g01870 vs. Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 6.8e-98
Identity = 190/252 (75.40%), Postives = 210/252 (83.33%), Query Frame = 1


Query: 1   MQEAGLGIMNAGVSS-GDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDK 60
           MQEA LG+M A V   GD  V  E   N QLK EIATHP+YEQLL+AHVACLRVATPID+
Sbjct: 1   MQEAALGMMGATVGGDGDTAVVAE--QNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQ 60

Query: 61  LPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRF 120
           LP+I+AQLSQSHH+LRSYAS+    H    HDR ELDNFLAQY++VLCSFK+QLQQHVR 
Sbjct: 61  LPIIEAQLSQSHHLLRSYASTAVGYH----HDRHELDNFLAQYVMVLCSFKEQLQQHVRV 120

Query: 121 HAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTD---AHDMM 180
           HAVEAVMACREIE+ L +LTG  L EG+G TMS+ D+DD+PMDF+ D S  D    HDM 
Sbjct: 121 HAVEAVMACREIENNLHSLTGATLGEGSGATMSE-DEDDLPMDFSSDNSGVDFSGGHDMT 180

Query: 181 GFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKN 240
           GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTTTVLKN
Sbjct: 181 GFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKN 240

Query: 241 WWQQHSKWPYPT 249
           WWQQH KWPYPT
Sbjct: 241 WWQQHCKWPYPT 245

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BLAST of Cp4.1LG13g01870 vs. Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.9e-96
Identity = 187/254 (73.62%), Postives = 210/254 (82.68%), Query Frame = 1


Query: 1   MQEAGLGIMNA---GVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPI 60
           MQEA LG++ A   G   GD  V  E   N Q+K EIATHP+Y+QLL+AHVACLRVATPI
Sbjct: 1   MQEAALGMIGATVGGGGDGDAAVVAE--QNRQMKGEIATHPMYDQLLAAHVACLRVATPI 60

Query: 61  DKLPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHV 120
           D+LP+I+AQLS SHH+LRSYAS+   A   S HDRQELDNFLAQY++VLCSFK+QLQQHV
Sbjct: 61  DQLPIIEAQLSHSHHLLRSYAST---AVGFSHHDRQELDNFLAQYVMVLCSFKEQLQQHV 120

Query: 121 RFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTD---AHD 180
           R HAVEAVMACREIE+ L +LTG  L EG+G TMS+ D+DD+ MDF+ D S  D    HD
Sbjct: 121 RVHAVEAVMACREIENNLHSLTGATLGEGSGATMSE-DEDDLQMDFSSDNSGVDFSGGHD 180

Query: 181 MMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVL 240
           M GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTTTVL
Sbjct: 181 MTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVL 240

Query: 241 KNWWQQHSKWPYPT 249
           KNWWQQH KWPYPT
Sbjct: 241 KNWWQQHCKWPYPT 248

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BLAST of Cp4.1LG13g01870 vs. Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.7e-88
Identity = 166/238 (69.75%), Postives = 193/238 (81.09%), Query Frame = 1


Query: 11  AGVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQS 70
           A  ++     + E      LK EIA HPL EQL++AHV CLRVATPID LP+IDAQL+QS
Sbjct: 34  AAAAAAAAAAAAEAEERQLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQS 93

Query: 71  HHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACRE 130
             +L SYA+ H+    LSPHD+QELD+FLAQYM++LCSF++QLQQHVR HAVEAVMACRE
Sbjct: 94  SGLLHSYAAHHRPF--LSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACRE 153

Query: 131 IESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSL 190
           IE +LQ LTG  L+EGTG TMS+++D+  PM        +D HD+MGFGPL+PT+SERSL
Sbjct: 154 IEQSLQDLTGATLEEGTGATMSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSL 213

Query: 191 MERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 249
           MERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT+LK WWQQHSKWPYPT
Sbjct: 214 MERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 269

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BLAST of Cp4.1LG13g01870 vs. Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-77
Identity = 148/222 (66.67%), Postives = 175/222 (78.83%), Query Frame = 1


Query: 27  NAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSHHVLRSYASSHQNAHS 86
           NA+ KAEI  HPLYE LLSAHVACLR+ATP+D+LP IDAQL+QS +V+  Y++       
Sbjct: 164 NARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVG 223

Query: 87  LSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREIESTLQALTGVNLDEG 146
               D +ELD F+  Y+++LCSFK+QLQQHVR HA+EAVMAC EIE +LQ+LTGV+  EG
Sbjct: 224 ----DDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 283

Query: 147 TGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGF 206
           T  TMSD++DD V  D  L     + HD MGFGPL+PTESERSLMERVRQELK ELKQG+
Sbjct: 284 TSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGY 343

Query: 207 KSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 249
           K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPT
Sbjct: 344 KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 381

[Close]

BLAST of Cp4.1LG13g01870 vs. Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.0e-77
Identity = 152/237 (64.14%), Postives = 186/237 (78.48%), Query Frame = 1


Query: 12  GVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSH 71
           G ++ D +VS +   NA+ KAEI +HPLYEQLLSAHVACLR+ATP+D+LP IDAQL+QS 
Sbjct: 144 GATAADGVVSWQ---NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ 203

Query: 72  HVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREI 131
           HV+  Y++    A  L   D+ ELD F+  Y+++LCSFK+QLQQHVR HA+EAVMAC EI
Sbjct: 204 HVVAKYSALGAAAQGLVGDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 263

Query: 132 ESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSLM 191
           E +LQ+LTGV+  EG G TMSD++D+ V  D  +     D   ++GFGPL+PTESERSLM
Sbjct: 264 EQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGLD---VLGFGPLIPTESERSLM 323

Query: 192 ERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 249
           ERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPT
Sbjct: 324 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373

[Close]

BLAST of Cp4.1LG13g01870 vs. TrEMBL
Match: A0A0A0KKD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G156150 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.4e-118
Identity = 225/256 (87.89%), Postives = 237/256 (92.58%), Query Frame = 1


Query: 1   MQEAGLGIMNA-----GVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQE GLG+M A     G  SGDV VSGEGVHN+QLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDKLPMIDAQLSQSHHVLRSYASS---HQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQ 120
           PID+LPMIDAQLSQSHH+LRSYASS   HQNAHSL+PH+RQELDNFLAQYMIVLCSFK+Q
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120

Query: 121 LQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDA 180
           LQQHVR HAVEAVMACREIE+TLQALTGV+L EGTG TMSD D+DD+PMDF+LDQS  DA
Sbjct: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSD-DEDDIPMDFSLDQSGADA 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPT 249
           VLKNWWQQHSKWPYPT
Sbjct: 241 VLKNWWQQHSKWPYPT 255

[Close]

BLAST of Cp4.1LG13g01870 vs. TrEMBL
Match: A0A0E3VMX7_POPNI (Homeodomain transcription factor of the Knotted family OS=Populus nigra GN=PniKNAT7 PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.6e-109
Identity = 208/256 (81.25%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MQEAGLGIMNAG-------VSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRV 60
           MQE  LG+M +G       +SSG++ VS  G  + QLKAEIATHPLYEQLLSAHV+CLRV
Sbjct: 1   MQEPNLGMMGSGSGGALGGLSSGEMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRV 60

Query: 61  ATPIDKLPMIDAQLSQSHHVLRSYASSH-QNAHSLSPHDRQELDNFLAQYMIVLCSFKDQ 120
           ATPID+LP+IDAQLSQSHH+LRSYAS H Q+ HSLSPH+RQ+LDNFLAQY+I+LC+FKDQ
Sbjct: 61  ATPIDQLPLIDAQLSQSHHLLRSYASQHNQHGHSLSPHERQDLDNFLAQYLIILCTFKDQ 120

Query: 121 LQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDA 180
           LQQHVR HAVEAVMACREIE+TLQALTGV L EGTG TMSD D+DD+ MDF+LDQSS D 
Sbjct: 121 LQQHVRVHAVEAVMACREIETTLQALTGVTLGEGTGATMSD-DEDDLQMDFSLDQSSADG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT+
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTS 240

Query: 241 VLKNWWQQHSKWPYPT 249
           VLKNWWQQHSKWPYPT
Sbjct: 241 VLKNWWQQHSKWPYPT 255

[Close]

BLAST of Cp4.1LG13g01870 vs. TrEMBL
Match: A9P848_POPTR (Homeodomain transcription factor family protein OS=Populus trichocarpa GN=POPTR_0001s08550g PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.6e-109
Identity = 208/256 (81.25%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MQEAGLGIMNAG-------VSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRV 60
           MQE  LG+M +G       +SSG++ VS  G  + QLKAEIATHPLYEQLLSAHV+CLRV
Sbjct: 1   MQEPNLGMMGSGSGGALGGLSSGEMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRV 60

Query: 61  ATPIDKLPMIDAQLSQSHHVLRSYASSH-QNAHSLSPHDRQELDNFLAQYMIVLCSFKDQ 120
           ATPID+LP+IDAQLSQSHH+LRSYAS H Q+ HSLSPH+RQ+LDNFLAQY+I+LC+FKDQ
Sbjct: 61  ATPIDQLPLIDAQLSQSHHLLRSYASQHNQHGHSLSPHERQDLDNFLAQYLIILCTFKDQ 120

Query: 121 LQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDA 180
           LQQHVR HAVEAVMACREIE+TLQALTGV L EGTG TMSD D+DD+ MDF+LDQSS D 
Sbjct: 121 LQQHVRVHAVEAVMACREIETTLQALTGVTLGEGTGATMSD-DEDDLQMDFSLDQSSADG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT+
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTS 240

Query: 241 VLKNWWQQHSKWPYPT 249
           VLKNWWQQHSKWPYPT
Sbjct: 241 VLKNWWQQHSKWPYPT 255

[Close]

BLAST of Cp4.1LG13g01870 vs. TrEMBL
Match: M5WA76_PRUPE (KNOPE7 OS=Prunus persica GN=KNOPE7 PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.6e-109
Identity = 208/249 (83.53%), Postives = 225/249 (90.36%), Query Frame = 1


Query: 1   MQEAGLGIMNAG-VSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDK 60
           MQE+GLG+M  G +SSGD        HN QLKAEIATHPLYEQLLSAHV+CLRVATPID+
Sbjct: 1   MQESGLGMMGGGGLSSGD---GHHEHHNRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQ 60

Query: 61  LPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRF 120
           LP+IDAQLSQSHH+LRSYAS  Q+ HS+SPH+RQELDNFLAQY+IVLCSFK+QLQQHVR 
Sbjct: 61  LPLIDAQLSQSHHLLRSYASQQQHGHSVSPHERQELDNFLAQYLIVLCSFKEQLQQHVRV 120

Query: 121 HAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFG 180
           HAVEAVMACREIES LQALTGV+L EG+G TMSD D+DD+ MDF+LDQS  D HDMMGFG
Sbjct: 121 HAVEAVMACREIESNLQALTGVSLGEGSGATMSD-DEDDMQMDFSLDQSGGDGHDMMGFG 180

Query: 181 PLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQ 240
           PLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQ
Sbjct: 181 PLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQ 240

Query: 241 QHSKWPYPT 249
           QHSKWPYPT
Sbjct: 241 QHSKWPYPT 245

[Close]

BLAST of Cp4.1LG13g01870 vs. TrEMBL
Match: A0A0B0N667_GOSAR (Homeobox HD1 OS=Gossypium arboreum GN=F383_11527 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 6.0e-109
Identity = 206/256 (80.47%), Postives = 230/256 (89.84%), Query Frame = 1


Query: 1   MQEAGLGIMNAG--------VSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLR 60
           MQE GLG+M++G        +SSG+V VSGE   N QLK+EIA HPLYEQLL+AHV+CLR
Sbjct: 1   MQEPGLGMMSSGGGSGGIGGLSSGEVSVSGE--QNRQLKSEIAVHPLYEQLLAAHVSCLR 60

Query: 61  VATPIDKLPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQ 120
           VATPID+LP+IDAQL+QSH++LRSYAS HQ+ HSLSPH+RQELDNFLAQY+IVLC+FK+Q
Sbjct: 61  VATPIDQLPLIDAQLAQSHNLLRSYASQHQHGHSLSPHERQELDNFLAQYLIVLCTFKEQ 120

Query: 121 LQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDA 180
           LQQHVR HAVEAVMACREIE+ LQALTGV L EGTG TMSD D+DD+ MDF+LDQS TD 
Sbjct: 121 LQQHVRVHAVEAVMACREIENNLQALTGVTLGEGTGATMSD-DEDDMQMDFSLDQSGTDG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HD+MGFGPL+PTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDLMGFGPLIPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPT 249
           VLKNWWQQHSKWPYPT
Sbjct: 241 VLKNWWQQHSKWPYPT 253

[Close]

BLAST of Cp4.1LG13g01870 vs. TAIR10
Match: AT1G62990.1 (AT1G62990.1 KNOTTED-like homeobox of Arabidopsis thaliana 7)

HSP 1 Score: 358.6 bits (919), Expect = 3.9e-99
Identity = 190/252 (75.40%), Postives = 210/252 (83.33%), Query Frame = 1


Query: 1   MQEAGLGIMNAGVSS-GDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDK 60
           MQEA LG+M A V   GD  V  E   N QLK EIATHP+YEQLL+AHVACLRVATPID+
Sbjct: 1   MQEAALGMMGATVGGDGDTAVVAE--QNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQ 60

Query: 61  LPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRF 120
           LP+I+AQLSQSHH+LRSYAS+    H    HDR ELDNFLAQY++VLCSFK+QLQQHVR 
Sbjct: 61  LPIIEAQLSQSHHLLRSYASTAVGYH----HDRHELDNFLAQYVMVLCSFKEQLQQHVRV 120

Query: 121 HAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTD---AHDMM 180
           HAVEAVMACREIE+ L +LTG  L EG+G TMS+ D+DD+PMDF+ D S  D    HDM 
Sbjct: 121 HAVEAVMACREIENNLHSLTGATLGEGSGATMSE-DEDDLPMDFSSDNSGVDFSGGHDMT 180

Query: 181 GFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKN 240
           GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTTTVLKN
Sbjct: 181 GFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKN 240

Query: 241 WWQQHSKWPYPT 249
           WWQQH KWPYPT
Sbjct: 241 WWQQHCKWPYPT 245

[Close]

BLAST of Cp4.1LG13g01870 vs. TAIR10
Match: AT5G25220.1 (AT5G25220.1 KNOTTED1-like homeobox gene 3)

HSP 1 Score: 290.0 bits (741), Expect = 1.7e-78
Identity = 152/237 (64.14%), Postives = 186/237 (78.48%), Query Frame = 1


Query: 12  GVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSH 71
           G ++ D +VS +   NA+ KAEI +HPLYEQLLSAHVACLR+ATP+D+LP IDAQL+QS 
Sbjct: 144 GATAADGVVSWQ---NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ 203

Query: 72  HVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREI 131
           HV+  Y++    A  L   D+ ELD F+  Y+++LCSFK+QLQQHVR HA+EAVMAC EI
Sbjct: 204 HVVAKYSALGAAAQGLVGDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 263

Query: 132 ESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSLM 191
           E +LQ+LTGV+  EG G TMSD++D+ V  D  +     D   ++GFGPL+PTESERSLM
Sbjct: 264 EQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGLD---VLGFGPLIPTESERSLM 323

Query: 192 ERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 249
           ERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPT
Sbjct: 324 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373

[Close]

BLAST of Cp4.1LG13g01870 vs. TAIR10
Match: AT5G11060.1 (AT5G11060.1 KNOTTED1-like homeobox gene 4)

HSP 1 Score: 289.7 bits (740), Expect = 2.2e-78
Identity = 149/222 (67.12%), Postives = 181/222 (81.53%), Query Frame = 1


Query: 27  NAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSHHVLRSYASSHQNAHS 86
           NA+ KAEI +HPLYEQLLSAHVACLR+ATP+D+LP IDAQL+QS +V+  Y S+ + A  
Sbjct: 120 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKY-STLEAAQG 179

Query: 87  LSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREIESTLQALTGVNLDEG 146
           L   D +ELD+F+  Y+++LCSFK+QLQQHVR HA+EAVMAC EIE +LQ+ TGV+  EG
Sbjct: 180 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 239

Query: 147 TGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGF 206
           TG TMS+++D+ V  D  L   S D    +GFGPL+PTESERSLMERVRQELK ELKQG+
Sbjct: 240 TGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQGY 299

Query: 207 KSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 249
           K +I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPYPT
Sbjct: 300 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337

[Close]

BLAST of Cp4.1LG13g01870 vs. TAIR10
Match: AT4G32040.1 (AT4G32040.1 KNOTTED1-like homeobox gene 5)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-71
Identity = 139/232 (59.91%), Postives = 175/232 (75.43%), Query Frame = 1


Query: 19  LVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSHHVLRSYA 78
           +V GE   +A  KA I  HP+YEQLL+AHVACLRVATP+D++P IDAQLSQ H V   Y+
Sbjct: 107 VVGGEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYS 166

Query: 79  SSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREIESTLQAL 138
           +           D +ELD+F++ Y+++LCSFK+QLQ HV  HA+EA+ AC EIE +LQ+L
Sbjct: 167 TLGVVV------DNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSL 226

Query: 139 TGVNLDEGTGLTMSDNDDDD-VPMDFALDQSSTDAHD-MMGFGPLLPTESERSLMERVRQ 198
           TGV+  E  G TMSD++DD+ V  +  +   S D  D +MGFGPL+PTE ERSLMERV++
Sbjct: 227 TGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKK 286

Query: 199 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 249
           ELK ELKQGFK +I D+REEI+RKRRAGKLPGDTT+VLK WW+ HSKWPYPT
Sbjct: 287 ELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332

[Close]

BLAST of Cp4.1LG13g01870 vs. TAIR10
Match: AT1G70510.1 (AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 2)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-15
Identity = 64/219 (29.22%), Postives = 103/219 (47.03%), Query Frame = 1


Query: 30  LKAEIATHPLYEQLLSAHVACLRVATPIDKLPMIDAQLSQSHHVLRSYASSHQNAHSLSP 89
           +K++IA+HPLY +LL  ++ C +V  P++   +++    ++H   R  A    +     P
Sbjct: 69  IKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPL--SCFGADP 128

Query: 90  HDRQELDNFLAQYMIVLCSFKDQLQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGL 149
               ELD F+  Y  +L  +K  L +       EA     +IE  LQ     NL  G   
Sbjct: 129 ----ELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQ-----NLCTGPAS 188

Query: 150 TMSDNDDDDVPMDFALDQSSTDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSR 209
             + +DD  V  D  L +    A D          +S++   +R   +LK +L + F S 
Sbjct: 189 ATALSDDGAVSSDEELREDDDIAAD----------DSQQRSNDR---DLKDQLLRKFGSH 248

Query: 210 IEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 249
           I  ++ E  +K++ GKLP +    L +WW  H+KWPYPT
Sbjct: 249 ISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259

[Close]

BLAST of Cp4.1LG13g01870 vs. NCBI nr
Match: gi|449452384|ref|XP_004143939.1| (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis sativus])

HSP 1 Score: 434.1 bits (1115), Expect = 2.0e-118
Identity = 225/256 (87.89%), Postives = 237/256 (92.58%), Query Frame = 1


Query: 1   MQEAGLGIMNA-----GVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQE GLG+M A     G  SGDV VSGEGVHN+QLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDKLPMIDAQLSQSHHVLRSYASS---HQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQ 120
           PID+LPMIDAQLSQSHH+LRSYASS   HQNAHSL+PH+RQELDNFLAQYMIVLCSFK+Q
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120

Query: 121 LQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDA 180
           LQQHVR HAVEAVMACREIE+TLQALTGV+L EGTG TMSD D+DD+PMDF+LDQS  DA
Sbjct: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSD-DEDDIPMDFSLDQSGADA 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPT 249
           VLKNWWQQHSKWPYPT
Sbjct: 241 VLKNWWQQHSKWPYPT 255

[Close]

BLAST of Cp4.1LG13g01870 vs. NCBI nr
Match: gi|659073680|ref|XP_008437194.1| (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 4.6e-118
Identity = 224/255 (87.84%), Postives = 236/255 (92.55%), Query Frame = 1


Query: 1   MQEAGLGIMNA-----GVSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQE GLG+M A     G  SGDV VSGEGVHN+QLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDKLPMIDAQLSQSHHVLRSYASS--HQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQL 120
           PID+LPMIDAQLSQSHH+LRSYAS   HQNAHSL+PH+RQELDNFLAQYMIVLCSFK+QL
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYASQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQL 120

Query: 121 QQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAH 180
           QQHVR HAVEAVMACREIE+TLQALTGV+L EGTG TMSD D+DD+PMDF+LDQS  DAH
Sbjct: 121 QQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSD-DEDDIPMDFSLDQSGADAH 180

Query: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240
           DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV
Sbjct: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240

Query: 241 LKNWWQQHSKWPYPT 249
           LKNWWQQHSKWPYPT
Sbjct: 241 LKNWWQQHSKWPYPT 254

[Close]

BLAST of Cp4.1LG13g01870 vs. NCBI nr
Match: gi|645266755|ref|XP_008238758.1| (PREDICTED: homeobox protein HD1 [Prunus mume])

HSP 1 Score: 402.9 bits (1034), Expect = 5.0e-109
Identity = 208/249 (83.53%), Postives = 226/249 (90.76%), Query Frame = 1


Query: 1   MQEAGLGIMNAG-VSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRVATPIDK 60
           MQE+GLG+M  G +SSGD   +    HN QLKAEIATHPLYEQLLSAHV+CLRVATPID+
Sbjct: 1   MQESGLGMMGGGGLSSGD---AHHEHHNRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQ 60

Query: 61  LPMIDAQLSQSHHVLRSYASSHQNAHSLSPHDRQELDNFLAQYMIVLCSFKDQLQQHVRF 120
           LP+IDAQLSQSHH+LRSYAS  Q+ HS+SPH+RQELDNFLAQY+IVLCSFK+QLQQHVR 
Sbjct: 61  LPLIDAQLSQSHHLLRSYASQQQHGHSVSPHERQELDNFLAQYLIVLCSFKEQLQQHVRV 120

Query: 121 HAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDAHDMMGFG 180
           HAVEAVMACREIES LQALTGV+L EG+G TMSD D+DD+ MDF+LDQS  D HDMMGFG
Sbjct: 121 HAVEAVMACREIESNLQALTGVSLGEGSGATMSD-DEDDMQMDFSLDQSGGDGHDMMGFG 180

Query: 181 PLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQ 240
           PLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQ
Sbjct: 181 PLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQ 240

Query: 241 QHSKWPYPT 249
           QHSKWPYPT
Sbjct: 241 QHSKWPYPT 245

[Close]

BLAST of Cp4.1LG13g01870 vs. NCBI nr
Match: gi|566147953|ref|XP_002299569.2| (homeodomain transcription factor family protein [Populus trichocarpa])

HSP 1 Score: 402.5 bits (1033), Expect = 6.6e-109
Identity = 208/256 (81.25%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MQEAGLGIMNAG-------VSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRV 60
           MQE  LG+M +G       +SSG++ VS  G  + QLKAEIATHPLYEQLLSAHV+CLRV
Sbjct: 1   MQEPNLGMMGSGSGGALGGLSSGEMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRV 60

Query: 61  ATPIDKLPMIDAQLSQSHHVLRSYASSH-QNAHSLSPHDRQELDNFLAQYMIVLCSFKDQ 120
           ATPID+LP+IDAQLSQSHH+LRSYAS H Q+ HSLSPH+RQ+LDNFLAQY+I+LC+FKDQ
Sbjct: 61  ATPIDQLPLIDAQLSQSHHLLRSYASQHNQHGHSLSPHERQDLDNFLAQYLIILCTFKDQ 120

Query: 121 LQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDA 180
           LQQHVR HAVEAVMACREIE+TLQALTGV L EGTG TMSD D+DD+ MDF+LDQSS D 
Sbjct: 121 LQQHVRVHAVEAVMACREIETTLQALTGVTLGEGTGATMSD-DEDDLQMDFSLDQSSADG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT+
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTS 240

Query: 241 VLKNWWQQHSKWPYPT 249
           VLKNWWQQHSKWPYPT
Sbjct: 241 VLKNWWQQHSKWPYPT 255

[Close]

BLAST of Cp4.1LG13g01870 vs. NCBI nr
Match: gi|743852048|ref|XP_011029150.1| (PREDICTED: homeobox protein HD1 [Populus euphratica])

HSP 1 Score: 402.5 bits (1033), Expect = 6.6e-109
Identity = 208/256 (81.25%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MQEAGLGIMNAG-------VSSGDVLVSGEGVHNAQLKAEIATHPLYEQLLSAHVACLRV 60
           MQE  LG+M +G       +SSG++ VS  G  + QLKAEIATHPLYEQLLSAHV+CLRV
Sbjct: 1   MQEPNLGMMGSGSGGALGGLSSGEMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRV 60

Query: 61  ATPIDKLPMIDAQLSQSHHVLRSYASSH-QNAHSLSPHDRQELDNFLAQYMIVLCSFKDQ 120
           ATPID+LP+IDAQLSQSHH+LRSYAS H Q+ HSLSPH+RQ+LDNFLAQY+I+LC+FKDQ
Sbjct: 61  ATPIDQLPLIDAQLSQSHHLLRSYASQHSQHGHSLSPHERQDLDNFLAQYLIILCTFKDQ 120

Query: 121 LQQHVRFHAVEAVMACREIESTLQALTGVNLDEGTGLTMSDNDDDDVPMDFALDQSSTDA 180
           LQQHVR HAVEAVMACREIE+TLQALTGV L EGTG TMSD D+DD+ MDF+LDQSS D 
Sbjct: 121 LQQHVRVHAVEAVMACREIETTLQALTGVTLGEGTGATMSD-DEDDLQMDFSLDQSSADG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT+
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTS 240

Query: 241 VLKNWWQQHSKWPYPT 249
           VLKNWWQQHSKWPYPT
Sbjct: 241 VLKNWWQQHSKWPYPT 255

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g01870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KNAT7_ARATH	6.8e-98	75.40	Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1	[more]
HD1_BRANA	2.9e-96	73.62	Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1	[more]
KNOS3_ORYSJ	1.7e-88	69.75	Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 ...	[more]
KNAP3_MALDO	1.8e-77	66.67	Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1	[more]
KNAT3_ARATH	3.0e-77	64.14	Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1	[more]

BLAST of Cp4.1LG13g01870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKD3_CUCSA	1.4e-118	87.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G156150 PE=4 SV=1	[more]
A0A0E3VMX7_POPNI	4.6e-109	81.25	Homeodomain transcription factor of the Knotted family OS=Populus nigra GN=PniKN...	[more]
A9P848_POPTR	4.6e-109	81.25	Homeodomain transcription factor family protein OS=Populus trichocarpa GN=POPTR_...	[more]
M5WA76_PRUPE	4.6e-109	83.53	KNOPE7 OS=Prunus persica GN=KNOPE7 PE=2 SV=1	[more]
A0A0B0N667_GOSAR	6.0e-109	80.47	Homeobox HD1 OS=Gossypium arboreum GN=F383_11527 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g01870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62990.1	3.9e-99	75.40	KNOTTED-like homeobox of Arabidopsis thaliana 7	[more]
AT5G25220.1	1.7e-78	64.14	KNOTTED1-like homeobox gene 3	[more]
AT5G11060.1	2.2e-78	67.12	KNOTTED1-like homeobox gene 4	[more]
AT4G32040.1	1.2e-71	59.91	KNOTTED1-like homeobox gene 5	[more]
AT1G70510.1	3.5e-15	29.22	KNOTTED-like from Arabidopsis thaliana 2	[more]

BLAST of Cp4.1LG13g01870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452384\|ref\|XP_004143939.1\|	2.0e-118	87.89	PREDICTED: homeobox protein knotted-1-like 7 [Cucumis sativus]	[more]
gi\|659073680\|ref\|XP_008437194.1\|	4.6e-118	87.84	PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo]	[more]
gi\|645266755\|ref\|XP_008238758.1\|	5.0e-109	83.53	PREDICTED: homeobox protein HD1 [Prunus mume]	[more]
gi\|566147953\|ref\|XP_002299569.2\|	6.6e-109	81.25	homeodomain transcription factor family protein [Populus trichocarpa]	[more]
gi\|743852048\|ref\|XP_011029150.1\|	6.6e-109	81.25	PREDICTED: homeobox protein HD1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR005541	KNOX2
IPR005540	KNOX1
IPR005539	ELK_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:2000652	regulation of secondary cell wall biogenesis
biological_process	GO:0010089	xylem development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g01870.1	Cp4.1LG13g01870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005539	ELK domain	PROFILE	PS51213	ELK	coord: 197..217 score: 9
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 30..71 score: 5.5
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 28..72 score: 7.4
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 88..139 score: 1.5
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 85..140 score: 2.8
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 224..283 score: 4.
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 26..248 score: 1.7E
None	No IPR available	PANTHER	PTHR11850:SF74	HOMEOBOX PROTEIN KNOTTED-1-LIKE 7	coord: 26..248 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g01870	Cucsa.302660	Cucumber (Gy14) v1	cgycpeB0789
Cp4.1LG13g01870	CmaCh15G011890	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g01870	CmaCh02G014920	Cucurbita maxima (Rimu)	cmacpeB601
Cp4.1LG13g01870	CmoCh02G015310	Cucurbita moschata (Rifu)	cmocpeB550
Cp4.1LG13g01870	CmoCh15G012520	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g01870	Cla011498	Watermelon (97103) v1	cpewmB183
Cp4.1LG13g01870	Csa5G156150	Cucumber (Chinese Long) v2	cpecuB174
Cp4.1LG13g01870	MELO3C005620	Melon (DHL92) v3.5.1	cpemeB156
Cp4.1LG13g01870	ClCG01G003250	Watermelon (Charleston Gray)	cpewcgB165
Cp4.1LG13g01870	CSPI05G05970	Wild cucumber (PI 183967)	cpecpiB176
Cp4.1LG13g01870	Lsi09G003190	Bottle gourd (USVL1VR-Ls)	cpelsiB131
Cp4.1LG13g01870	MELO3C005620.2	Melon (DHL92) v3.6.1	cpemedB183
Cp4.1LG13g01870	CsaV3_5G003340	Cucumber (Chinese Long) v3	cpecucB0209
Cp4.1LG13g01870	Bhi12G000297	Wax gourd	cpewgoB0219
Cp4.1LG13g01870	CsGy5G003250	Cucumber (Gy14) v2	cgybcpeB597
Cp4.1LG13g01870	Carg16665	Silver-seed gourd	carcpeB1295
Cp4.1LG13g01870	Carg02497	Silver-seed gourd	carcpeB1271

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG13g01870	Cp4.1LG05g03950	Cucurbita pepo (Zucchini)	cpecpeB226

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g01870	Cucurbita pepo (Zucchini)	cpecpeB230
Cp4.1LG13g01870	Cucurbita maxima (Rimu)	cmacpeB342
Cp4.1LG13g01870	Cucurbita maxima (Rimu)	cmacpeB813
Cp4.1LG13g01870	Cucurbita moschata (Rifu)	cmocpeB767
Cp4.1LG13g01870	Wild cucumber (PI 183967)	cpecpiB171
Cp4.1LG13g01870	Cucumber (Chinese Long) v2	cpecuB171
Cp4.1LG13g01870	Bottle gourd (USVL1VR-Ls)	cpelsiB153
Cp4.1LG13g01870	Bottle gourd (USVL1VR-Ls)	cpelsiB156
Cp4.1LG13g01870	Watermelon (Charleston Gray)	cpewcgB175
Cp4.1LG13g01870	Watermelon (97103) v1	cpewmB182
Cp4.1LG13g01870	Melon (DHL92) v3.5.1	cpemeB177
Cp4.1LG13g01870	Cucumber (Gy14) v2	cgybcpeB313
Cp4.1LG13g01870	Cucumber (Gy14) v2	cgybcpeB314
Cp4.1LG13g01870	Melon (DHL92) v3.6.1	cpemedB211
Cp4.1LG13g01870	Melon (DHL92) v3.6.1	cpemedB212
Cp4.1LG13g01870	Silver-seed gourd	carcpeB0684
Cp4.1LG13g01870	Silver-seed gourd	carcpeB1209
Cp4.1LG13g01870	Cucumber (Chinese Long) v3	cpecucB0199
Cp4.1LG13g01870	Cucumber (Chinese Long) v3	cpecucB0200
Cp4.1LG13g01870	Cucumber (Chinese Long) v3	cpecucB0201
Cp4.1LG13g01870	Wax gourd	cpewgoB0243