Cp4.1LG13g01470 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g01470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Nuclear transport factor 2 family protein, putative
Location	Cp4.1LG13 : 998378 .. 1000797 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGACCCCATCCATTCCTCCTCCTGCAATGAACTAATACTCACAATGGCCCTTATTACGAGCCCTCCTCCTCAAGCTCTCACCTTGGGCTCCCAACCATTTAGAACATTTGCATATACATCCATCCCTAAGAGACCCTCATATTTGTTTCAACAAAAGAAGCTTAGGAAAACAAGCTACACATTAGCCACCAACGTTAAGCCCCGTTTCGTGTTGTCGTGCTTAAAGGACGGCTCGGGTTGTAGCTTAGATTCATGTTCAAAGTCTCCATCAGAAATGGTTAGGAAATTGTACGAGTGCATCAATGAAAAGAAGTTGAAGGAATTGAGTAGTTACATGTCAGAAGATTGCCTTATTGAGGACTCCTTGTTTGATGAACCATTTATAGGGAAGGAGGTATTTTTGTGTTGTCATTCATACTAGTATGAATGTACAGAAGAAATCTGTTCTTGATTGTCCATGGAACCTACTTGCAGGCTGCTCTCAAGTTCTTTGAAGAACTAACTCAAAGTATGGGTCGGGATGTGAAGTTTAGGTTTCGTAACGTCTATGAAAGTGGCACGTCTCGGGCTGGAGCAACTTGGCATCTAGGTACTTCTATCTATCATTAGAGATGTCTATTTAGAATCCACGTTTAAATACAAGAGAGAGTTAGGAGAGATTTTTCGACGTAAGTGAAACGGGGCAGGGACGGAGATTACATTCTCGTCCCTGTTTTTGGCCTTGGCCTTACCTTGCCTGCGGTGGGGACAGGGACAGAGATTACATTCTCGTTCGTGTTTTTAGCCTCGGTCTTGCCCGCGGTGGGGACAGGGACAGAGGTTACATTCTTGTCCCTATTCTTTGCCTCGACCTCACTCGTGATGGGGACAGGGACAGAGATTACATTTTCATCCCTGTTTTCGAGAGGAAGGACGGGGATTACATTCTCATCCCCTGTTTTTAGCCTCGGTCTCGCCCGTGGTGGGGGCAGGGACAGAGATTACATTCTCATCCTTGATTTTGGCCTTGGCCTTGCCTACGATGGGGACAGGGACGAAGATTACATTCTCGTCCCTATTCTTCGCCTCAGCCTCACCTGCGGTGGGGACAGGGACGAAGATTACATTCTTGTCACTGTTCTTGGTCTTGGCCTCGCCTGCGGTGGGGATAGGGATGAAGATTACATTCTCATCCTTGTTTTTGGCATAGGCCTCGCTTGCAGTGGGGATAGGGACGGAGATTACATTCTCGTGCCTGTTCTTGGCCTCGACCTCATCTGCAGTGGGAACAAGGACAAAGATTTCATTCTCGTCCATGTTCCTGGCCTCGGCCTCACCCGCAGTGGAGACTGGGAAGAAGATTACATTCTCGTCCCTATTTTTGCCCTTGGCCTCGCCAGCAGTGGGGACAGGGGCAAAGATTACATTCTCGTCCTGTTTTTGTCCTTGGTCTCACCCGCGGTGGGGACAAGGATAAAAATTACATTCTCGTCTCTATGCTTGGCCTCAGCCTCGCTCGTGTGGAGATAGGGACGGAGGTTACATTCATATCCCTGTTCTTGGTCTCGACCTCACCCACAGTGGAGACAGGGACAAAAATTACATTCTTATCCCTGTTCTTGGCCTCCGCCTCGTCTGCGGTGGGGACTGGGACGAAGATTACATTCTCGTCTCTATTTTTGGCCTCGGTCTCGCCCGCAATGAGGACAGGGACACAAAGACTTCCCTACTCCCACCTCACTCGTGAACATCTCTATCTACCATCATCCCTCCAACTCTTAGGATTCTAATAGATCAACAAACTTGGTCATCATTCAACAGTATGGAAGAACACAAAGATCCCCTTCACCAAAGGTTGCACCTTCATAGACATCAACAACGAACAAAGAACCATACAGTAAACCAACCAACACACAAACTCAATACCTATCTCAACCAATTCCTCGCTATCTTACATGCAACTCTTATGCAGGAAGGCACAAATCATAATAGAACCACAAGTAAAAGCGGGGCATCTCATCTTGGTGAGTACACACAACTCATAACTCCCAGCAATTTCAACACATAAAATGAGTATAATCCATACAAATTGTGTAAACAAATCATCAGGGTATGATGAAGCTGGTAACCTCCTTGCTTGCTCAGTATCCAGCAATTCATAAATGTAAGTCATTTTGGATACCTTAAGCCATAGAACTTCATGAACAAACATGACATTATGGGTGTTGCAGGGGTGATGAAACTTTCCCACCAGCGTTGGGTAAGGTGGCTGGCCAAGATCTGCGTAGTCCTCTACAAGTTCTTCTTGCACAGCCTCTTGAGGAGCTATCTAACCTTTATACATTGTGGCTCTCTAATGTTTGTTTTTACACTCAAATTGCTACGTTGGGTTATAGGCTTCTTCAATTAAAAAATAATAATAATAAATAAATAAATTCA

mRNA sequence

GAGGACCCCATCCATTCCTCCTCCTGCAATGAACTAATACTCACAATGGCCCTTATTACGAGCCCTCCTCCTCAAGCTCTCACCTTGGGCTCCCAACCATTTAGAACATTTGCATATACATCCATCCCTAAGAGACCCTCATATTTGTTTCAACAAAAGAAGCTTAGGAAAACAAGCTACACATTAGCCACCAACGTTAAGCCCCGTTTCGTGTTGTCGTGCTTAAAGGACGGCTCGGGTTGTAGCTTAGATTCATGTTCAAAGTCTCCATCAGAAATGGTTAGGAAATTGTACGAGTGCATCAATGAAAAGAAGTTGAAGGAATTGAGTAGTTACATGTCAGAAGATTGCCTTATTGAGGACTCCTTGTTTGATGAACCATTTATAGGGAAGGAGGCTGCTCTCAAGTTCTTTGAAGAACTAACTCAAAGTATGGGTCGGGATGTGAAGTTTAGGTTTCGTAACGTCTATGAAATATGGAAGAACACAAAGATCCCCTTCACCAAAGGTTGCACCTTCATAGACATCAACAACGAACAAAGAACCATACAGAAGGCACAAATCATAATAGAACCACAAGTAAAAGCGGGGCATCTCATCTTGGGTATGATGAAGCTGGTAACCTCCTTGCTTGCTCAGGGTGATGAAACTTTCCCACCAGCGTTGGGTAAGGTGGCTGGCCAAGATCTGCGTAGTCCTCTACAAGTTCTTCTTGCACAGCCTCTTGAGGAGCTATCTAACCTTTATACATTGTGGCTCTCTAATGTTTGTTTTTACACTCAAATTGCTACGTTGGGTTATAGGCTTCTTCAATTAAAAAATAATAATAATAAATAAATAAATTCA

Coding sequence (CDS)

GAGGACCCCATCCATTCCTCCTCCTGCAATGAACTAATACTCACAATGGCCCTTATTACGAGCCCTCCTCCTCAAGCTCTCACCTTGGGCTCCCAACCATTTAGAACATTTGCATATACATCCATCCCTAAGAGACCCTCATATTTGTTTCAACAAAAGAAGCTTAGGAAAACAAGCTACACATTAGCCACCAACGTTAAGCCCCGTTTCGTGTTGTCGTGCTTAAAGGACGGCTCGGGTTGTAGCTTAGATTCATGTTCAAAGTCTCCATCAGAAATGGTTAGGAAATTGTACGAGTGCATCAATGAAAAGAAGTTGAAGGAATTGAGTAGTTACATGTCAGAAGATTGCCTTATTGAGGACTCCTTGTTTGATGAACCATTTATAGGGAAGGAGGCTGCTCTCAAGTTCTTTGAAGAACTAACTCAAAGTATGGGTCGGGATGTGAAGTTTAGGTTTCGTAACGTCTATGAAATATGGAAGAACACAAAGATCCCCTTCACCAAAGGTTGCACCTTCATAGACATCAACAACGAACAAAGAACCATACAGAAGGCACAAATCATAATAGAACCACAAGTAAAAGCGGGGCATCTCATCTTGGGTATGATGAAGCTGGTAACCTCCTTGCTTGCTCAGGGTGATGAAACTTTCCCACCAGCGTTGGGTAAGGTGGCTGGCCAAGATCTGCGTAGTCCTCTACAAGTTCTTCTTGCACAGCCTCTTGAGGAGCTATCTAACCTTTATACATTGTGGCTCTCTAATGTTTGTTTTTACACTCAAATTGCTACGTTGGGTTATAGGCTTCTTCAATTAAAAAATAATAATAATAAATAA

Protein sequence

EDPIHSSSCNELILTMALITSPPPQALTLGSQPFRTFAYTSIPKRPSYLFQQKKLRKTSYTLATNVKPRFVLSCLKDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQSMGRDVKFRFRNVYEIWKNTKIPFTKGCTFIDINNEQRTIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQGDETFPPALGKVAGQDLRSPLQVLLAQPLEELSNLYTLWLSNVCFYTQIATLGYRLLQLKNNNNK

Homology

[Close]

BLAST of Cp4.1LG13g01470 vs. TrEMBL
Match: A0A0A0KMI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152840 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-49
Identity = 126/219 (57.53%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 16  MALITSPPPQALTLG-SQPFRTFA-YTSIPKRPSYLFQQKK------LRKTSYTLATNVK 75
           M+LITSP  QA+  G SQ FR F+ YT + KR S +FQQKK       RKT+ TL     
Sbjct: 1   MSLITSP--QAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTL----- 60

Query: 76  PRFVLSCLKDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEP 135
              VLSCL D S     S S SP EM+ + Y+CINEK LKE+S+Y+SEDCLIEDSLF E 
Sbjct: 61  ---VLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEK 120

Query: 136 FIGKEAALKFFEELTQSMGRDVKFRFRNVYE------------IWKNTKIPFTKGCTFID 195
           F GK+AA+ F E+LT+SMG DVKFR R VYE             W+N +IP TKGCTFID
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFID 180

Query: 196 INNEQR-TIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQ 214
           I +E+R TIQK QII EPQ KAGHLIL +MKLVT LLA+
Sbjct: 181 IRDEERKTIQKIQIINEPQFKAGHLILDIMKLVTLLLAK 209

[Close]

BLAST of Cp4.1LG13g01470 vs. TrEMBL
Match: B9GKE2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s09750g PE=4 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-23
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 1


Query: 89  SPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQSMGRD 148
           SPS M+++ Y CINEKKLKEL  Y+S+DC  ED  F +P  GK+  + FF +LT  MG++
Sbjct: 78  SPSHMIKQFYTCINEKKLKELDGYISDDCFFEDCSFLQPMQGKKEVMHFFGQLTAGMGQN 137

Query: 149 VKF-------RFRNVYEIWKNTKIPFTKGCTFIDIN--NEQRTIQKAQIIIEPQVKAGHL 208
           VKF         R +Y  WK  +IPFTKGC+F + +   ++  I+KA ++IE  +K G +
Sbjct: 138 VKFILEHSNKLMRILYAEWKTIQIPFTKGCSFYECSQKEDRLVIKKALVVIESPIKPGGI 197

Query: 209 ILGMMKLVTSLLAQGDETFPPA 222
           +L ++K VT++     + FP A
Sbjct: 198 VLTLLKNVTAIF----DDFPKA 215

[Close]

BLAST of Cp4.1LG13g01470 vs. TrEMBL
Match: A0A151TJU4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_013651 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-23
Identity = 57/138 (41.30%), Postives = 89/138 (64.49%), Query Frame = 1


Query: 87  SKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQSMG 146
           S SP+++V + Y CIN+K L+ L  Y+SED   +D  F +PF GKE  ++F  +LTQ MG
Sbjct: 37  SLSPTQIVDQYYRCINDKDLRHLDEYISEDACFDDYAFTKPFHGKEEVMRFLGQLTQCMG 96

Query: 147 RDVKFRFRNVYE------------IWKNTKIPFTKGCTFIDINNEQRT--IQKAQIIIEP 206
           R+VKF+ +++YE             WK  +IPFT+GCTF  ++NE +   I +A+++IE 
Sbjct: 97  RNVKFKVKHIYEGEDLTAAVNWHLEWKKKQIPFTRGCTFFKLSNEGQNMIIWRAEVLIES 156

Query: 207 QVKAGHLILGMMKLVTSL 211
            +K G ++L ++K VTS+
Sbjct: 157 PIKPGSVVLTLLKNVTSI 174

[Close]

BLAST of Cp4.1LG13g01470 vs. TrEMBL
Match: M5WDG8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015862mg PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22
Identity = 73/199 (36.68%), Postives = 113/199 (56.78%), Query Frame = 1


Query: 87  SKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQSMG 146
           S SPS+ ++K Y+CINEK LK+L  Y+SE C IE+  F+ P  GK+  + FFE+L   MG
Sbjct: 82  SPSPSDTIKKFYKCINEKNLKQLGDYISEGCYIEECSFNTPLQGKKEVMNFFEQLITGMG 141

Query: 147 RDVKFRFRNVYE------------IWKNTKIPFTKGCTFIDIN--NEQRTIQKAQIIIEP 206
           ++VKF  ++V E             WK+ +IP+T+GC+F + +   E+  ++KAQI+IE 
Sbjct: 142 QNVKFCIQHVCEGDELIGAANWHMEWKDKQIPYTRGCSFFEFSKKGEKIVLKKAQIVIES 201

Query: 207 QVKAGHLILGMMKLVTSLLAQGDETFPPALGKVAGQDLRSPLQVLLAQPLEELSNLYT-L 266
            +K G ++L ++K +T+L     + FP    K     L+SP  V      + L  +YT L
Sbjct: 202 PIKPGTVVLSLLKTMTTLF----DGFP----KTTEWFLKSPHIV-----FQWLWKIYTIL 261

Query: 267 WLSNVCFYTQIATLGYRLL 271
           +   V  Y ++  L  RLL
Sbjct: 262 FAPLVDSYLRLWNLAARLL 267

[Close]

BLAST of Cp4.1LG13g01470 vs. TrEMBL
Match: A0A059C144_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00649 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-22
Identity = 65/164 (39.63%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 87  SKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQSMG 146
           S SP E  ++LYE INEK L+ L   +SEDC  ED  F  PF GK+  L FFE+LT +MG
Sbjct: 73  SYSPGERAKQLYEYINEKNLEALDEIISEDCCFEDFYFPTPFDGKKEILHFFEQLTSNMG 132

Query: 147 RDVKFRFRNVYE-----------IWKNTKIPFTKGCTFIDI--NNEQRTIQKAQIIIEPQ 206
           ++V+F  RNV E            W   +IPFT+GC+F +   + E+  I+KAQ+ +E  
Sbjct: 133 KNVRFNLRNVGEDENSAWVNWHLEWSGDEIPFTRGCSFYEFSKDEERLVIRKAQVFVEWP 192

Query: 207 VKAGHLILGMMKLVTSLLAQGDETFPPALGKVAGQDLRSPLQVL 238
           +K G  +L ++K +TSL     + FP    +V+ + L+SP  ++
Sbjct: 193 IKPGGTVLILLKTITSLF----DDFP----EVSDRFLKSPRAIV 228

[Close]

BLAST of Cp4.1LG13g01470 vs. TAIR10
Match: AT5G41470.1 (AT5G41470.1 Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 74/201 (36.82%), Postives = 110/201 (54.73%), Query Frame = 1


Query: 92  EMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQSMGRDVKF 151
           + V K Y  INEK   +LSS +S DC I+D  F +PF GK+ A++FFEEL +SMG++VKF
Sbjct: 77  DAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEAMEFFEELVKSMGQNVKF 136

Query: 152 RFRNVYE------------IWKNTKIPFTKGCTFIDINNE--QRTIQKAQIIIEPQVKAG 211
              NV E             WK  KIPFT+GC+F +  +E  +  I+ A+I+IE  +K G
Sbjct: 137 CVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSFYEFIDEGGRLVIRNARILIESPIKPG 196

Query: 212 HLILGMMKLVTSL---LAQGDETF---PPALGKVA----GQDLRSPLQVLLAQPLEELSN 269
            + L ++K +T L     +G E F   P A+ + A    G  L   +  ++A  L+ LSN
Sbjct: 197 GITLSLLKNITFLFDEFPKGAELFLEKPYAIIQAAIRIYGLFLAPLINHVMASYLKLLSN 256

[Close]

BLAST of Cp4.1LG13g01470 vs. TAIR10
Match: AT1G71480.1 (AT1G71480.1 Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 79.0 bits (193), Expect = 5.3e-15
Identity = 51/186 (27.42%), Postives = 90/186 (48.39%), Query Frame = 1


Query: 46  PSYLFQQKKLRKTSYT------LATNVKPRFVLSCLKDGSGCSLDSCSKSPSEMVRKLYE 105
           PS+    K ++ TS T      L+ +  P    +   D      ++   S SE+V   Y 
Sbjct: 24  PSFFLPTKLVKPTSLTHSQPPRLSASYGPAAKAATAND---VVPETAPTSASEVVSSFYA 83

Query: 106 CINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQSMGRDVKFRFRNV--- 165
            +N   L  ++  +++DC+ ED +F  PF+G++A L FF +  +S   D++F   ++   
Sbjct: 84  AVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIESTSTDLQFVIDDISTE 143

Query: 166 ---------YEIWKNTKIPFTKGCTF--IDINNEQRTIQKAQIIIEPQVKAGHLILGMMK 212
                    +  WK    PF+KGC+F  +++ + +R I   +  +EP +K G  +L  +K
Sbjct: 144 DSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKRQIVYGRDCVEPAIKPGETVLAAIK 203

[Close]

BLAST of Cp4.1LG13g01470 vs. NCBI nr
Match: gi|700194892|gb|KGN50069.1| (hypothetical protein Csa_5G152840 [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49
Identity = 126/219 (57.53%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 16  MALITSPPPQALTLG-SQPFRTFA-YTSIPKRPSYLFQQKK------LRKTSYTLATNVK 75
           M+LITSP  QA+  G SQ FR F+ YT + KR S +FQQKK       RKT+ TL     
Sbjct: 1   MSLITSP--QAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTL----- 60

Query: 76  PRFVLSCLKDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEP 135
              VLSCL D S     S S SP EM+ + Y+CINEK LKE+S+Y+SEDCLIEDSLF E 
Sbjct: 61  ---VLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEK 120

Query: 136 FIGKEAALKFFEELTQSMGRDVKFRFRNVYE------------IWKNTKIPFTKGCTFID 195
           F GK+AA+ F E+LT+SMG DVKFR R VYE             W+N +IP TKGCTFID
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFID 180

Query: 196 INNEQR-TIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQ 214
           I +E+R TIQK QII EPQ KAGHLIL +MKLVT LLA+
Sbjct: 181 IRDEERKTIQKIQIINEPQFKAGHLILDIMKLVTLLLAK 209

[Close]

BLAST of Cp4.1LG13g01470 vs. NCBI nr
Match: gi|659073917|ref|XP_008437322.1| (PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 6.4e-47
Identity = 118/213 (55.40%), Postives = 141/213 (66.20%), Query Frame = 1


Query: 16  MALITSPPPQALTLGSQP-FRTFAYTS-IPKRPSYLFQQKKLRKTSYTLATNVKPRFVLS 75
           M+LITSP  QA+  G  P FR F+YT  + KR S +FQQKK         TNV  R V S
Sbjct: 1   MSLITSP--QAVNFGGSPSFRRFSYTLFLNKRTSCIFQQKKNYGNYNKRKTNV--RLVSS 60

Query: 76  CLKDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEA 135
           CL D S     S S SP EM+   Y+CINEK LK++++Y+SEDCLIEDSLF E F GK+A
Sbjct: 61  CLMDDSFSYSSSSSNSPGEMIEMFYKCINEKNLKKMNTYISEDCLIEDSLFIEKFKGKKA 120

Query: 136 ALKFFEELTQSMGRDVKFRFRNVYE------------IWKNTKIPFTKGCTFIDINNEQR 195
           A+ F E+LT+SMG DVKFR R VYE             W+N +IP TKGCTFIDI +E+R
Sbjct: 121 AMSFIEKLTESMGPDVKFRIRTVYERRPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEER 180

Query: 196 -TIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQ 214
            TIQ  QII E Q+KAGHL L +MKLVT LLA+
Sbjct: 181 KTIQMVQIITESQLKAGHLFLAIMKLVTLLLAK 209

[Close]

BLAST of Cp4.1LG13g01470 vs. NCBI nr
Match: gi|778699525|ref|XP_011654728.1| (PREDICTED: uncharacterized protein LOC101214565 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39
Identity = 90/142 (63.38%), Postives = 106/142 (74.65%), Query Frame = 1


Query: 85  SCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAALKFFEELTQS 144
           S S SP EM+ + Y+CINEK LKE+S+Y+SEDCLIEDSLF E F GK+AA+ F E+LT+S
Sbjct: 10  SSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSFIEKLTES 69

Query: 145 MGRDVKFRFRNVYE------------IWKNTKIPFTKGCTFIDINNEQR-TIQKAQIIIE 204
           MG DVKFR R VYE             W+N +IP TKGCTFIDI +E+R TIQK QII E
Sbjct: 70  MGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQKIQIINE 129

Query: 205 PQVKAGHLILGMMKLVTSLLAQ 214
           PQ KAGHLIL +MKLVT LLA+
Sbjct: 130 PQFKAGHLILDIMKLVTLLLAK 151

[Close]

BLAST of Cp4.1LG13g01470 vs. NCBI nr
Match: gi|659073919|ref|XP_008437324.1| (PREDICTED: uncharacterized protein LOC103482777 isoform X2 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37
Identity = 88/152 (57.89%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 75  LKDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPFIGKEAA 134
           + D   CS  S S SP EM+   Y+CINEK LKE+S+Y+SEDCLIED+LF E F GK+AA
Sbjct: 1   MDDSFSCS-GSSSNSPGEMIEIFYKCINEKNLKEMSTYISEDCLIEDTLFSEKFKGKKAA 60

Query: 135 LKFFEELTQSMGRDVKFRFRNVYE------------IWKNTKIPFTKGCTFIDINNEQR- 194
           + F E+LT+SMG D+KFR R VYE             W+N +IP TKGCTFIDI +E+R 
Sbjct: 61  MSFIEKLTESMGPDMKFRIRKVYERRPSTARAIWHLEWRNMEIPLTKGCTFIDIRDEERK 120

Query: 195 TIQKAQIIIEPQVKAGHLILGMMKLVTSLLAQ 214
           TIQ  QII E Q+KAGHL L +MKLVT LLA+
Sbjct: 121 TIQMVQIITESQLKAGHLFLAIMKLVTLLLAK 151

[Close]

BLAST of Cp4.1LG13g01470 vs. NCBI nr
Match: gi|764580879|ref|XP_011463917.1| (PREDICTED: uncharacterized protein LOC105351429 [Fragaria vesca subsp. vesca])

HSP 1 Score: 130.2 bits (326), Expect = 5.7e-27
Identity = 68/157 (43.31%), Postives = 97/157 (61.78%), Query Frame = 1


Query: 69  RFVLSCLKDGSGCSLDSCSKSPSEMVRKLYECINEKKLKELSSYMSEDCLIEDSLFDEPF 128
           R +L  +      +  S S SPSE +   Y+C+NEK LK+LS Y+S DC IE+  F  P 
Sbjct: 114 RALLPIMAAKGNSTFSSGSLSPSETINDFYKCVNEKNLKQLSHYISTDCYIEECSFSTPL 173

Query: 129 IGKEAALKFFEELTQSMGRDVKFRFRNVYE-------------IWKNTKIPFTKGCTFID 188
            GK+  +KFFEELT++MG+++KF  R V E              WK+ +IPFT+GC+F +
Sbjct: 174 QGKKVIMKFFEELTEAMGKNIKFSIRIVCEGNDQLTAAANWHMEWKDKQIPFTRGCSFFE 233

Query: 189 INNE--QRTIQKAQIIIEPQVKAGHLILGMMKLVTSL 211
            + E  +  I+KAQI+IE  +K GHL+L ++K VTSL
Sbjct: 234 CSTEGGKLIIKKAQIVIESPIKPGHLVLSLLKAVTSL 270

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g01470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g01470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMI4_CUCSA	2.2e-49	57.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152840 PE=4 SV=1	[more]
B9GKE2_POPTR	3.5e-23	42.25	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s09750g PE=4 SV=2	[more]
A0A151TJU4_CAJCA	4.5e-23	41.30	Uncharacterized protein OS=Cajanus cajan GN=KK1_013651 PE=4 SV=1	[more]
M5WDG8_PRUPE	2.2e-22	36.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015862mg PE=4 SV=1	[more]
A0A059C144_EUCGR	3.8e-22	39.63	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00649 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g01470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41470.1	1.4e-23	36.82	Nuclear transport factor 2 (NTF2) family protein	[more]
AT1G71480.1	5.3e-15	27.42	Nuclear transport factor 2 (NTF2) family protein	[more]

BLAST of Cp4.1LG13g01470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194892\|gb\|KGN50069.1\|	3.1e-49	57.53	hypothetical protein Csa_5G152840 [Cucumis sativus]	[more]
gi\|659073917\|ref\|XP_008437322.1\|	6.4e-47	55.40	PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo]	[more]
gi\|778699525\|ref\|XP_011654728.1\|	3.8e-39	63.38	PREDICTED: uncharacterized protein LOC101214565 [Cucumis sativus]	[more]
gi\|659073919\|ref\|XP_008437324.1\|	2.7e-37	57.89	PREDICTED: uncharacterized protein LOC103482777 isoform X2 [Cucumis melo]	[more]
gi\|764580879\|ref\|XP_011463917.1\|	5.7e-27	43.31	PREDICTED: uncharacterized protein LOC105351429 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g01470.1	Cp4.1LG13g01470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33698	FAMILY NOT NAMED	coord: 87..211 score: 1.4
None	No IPR available	PANTHER	PTHR33698:SF1	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 87..211 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g01470	Cucsa.303400	Cucumber (Gy14) v1	cgycpeB0789
Cp4.1LG13g01470	CmaCh15G012460	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g01470	CmoCh15G013120	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g01470	Cla011422	Watermelon (97103) v1	cpewmB183
Cp4.1LG13g01470	Csa5G152840	Cucumber (Chinese Long) v2	cpecuB174
Cp4.1LG13g01470	MELO3C005702	Melon (DHL92) v3.5.1	cpemeB156
Cp4.1LG13g01470	ClCG01G002430	Watermelon (Charleston Gray)	cpewcgB165
Cp4.1LG13g01470	CSPI05G05130	Wild cucumber (PI 183967)	cpecpiB176
Cp4.1LG13g01470	Lsi09G002290	Bottle gourd (USVL1VR-Ls)	cpelsiB131
Cp4.1LG13g01470	MELO3C005702.2	Melon (DHL92) v3.6.1	cpemedB183
Cp4.1LG13g01470	CsaV3_5G002540	Cucumber (Chinese Long) v3	cpecucB0209
Cp4.1LG13g01470	Bhi12G000278	Wax gourd	cpewgoB0226
Cp4.1LG13g01470	CsGy5G002430	Cucumber (Gy14) v2	cgybcpeB597
Cp4.1LG13g01470	Carg16618	Silver-seed gourd	carcpeB1295

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g01470	Silver-seed gourd	carcpeB1271
Cp4.1LG13g01470	Cucumber (Chinese Long) v3	cpecucB0198
Cp4.1LG13g01470	Cucumber (Chinese Long) v3	cpecucB0200
Cp4.1LG13g01470	Cucumber (Chinese Long) v3	cpecucB0207
Cp4.1LG13g01470	Cucumber (Chinese Long) v3	cpecucB0242
Cp4.1LG13g01470	Cucurbita pepo (Zucchini)	cpecpeB196
Cp4.1LG13g01470	Cucurbita pepo (Zucchini)	cpecpeB226
Cp4.1LG13g01470	Cucumber (Gy14) v1	cgycpeB0361
Cp4.1LG13g01470	Cucurbita maxima (Rimu)	cmacpeB601
Cp4.1LG13g01470	Cucurbita moschata (Rifu)	cmocpeB661
Cp4.1LG13g01470	Cucurbita moschata (Rifu)	cmocpeB550
Cp4.1LG13g01470	Wild cucumber (PI 183967)	cpecpiB169
Cp4.1LG13g01470	Wild cucumber (PI 183967)	cpecpiB175
Cp4.1LG13g01470	Wild cucumber (PI 183967)	cpecpiB203
Cp4.1LG13g01470	Cucumber (Chinese Long) v2	cpecuB168
Cp4.1LG13g01470	Bottle gourd (USVL1VR-Ls)	cpelsiB138
Cp4.1LG13g01470	Bottle gourd (USVL1VR-Ls)	cpelsiB155
Cp4.1LG13g01470	Watermelon (Charleston Gray)	cpewcgB174
Cp4.1LG13g01470	Watermelon (Charleston Gray)	cpewcgB178
Cp4.1LG13g01470	Watermelon (97103) v1	cpewmB180
Cp4.1LG13g01470	Melon (DHL92) v3.5.1	cpemeB162
Cp4.1LG13g01470	Cucumber (Gy14) v2	cgybcpeB314
Cp4.1LG13g01470	Melon (DHL92) v3.6.1	cpemedB192