Cp4.1LG12g10580 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g10580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFar-red impaired responsive (FAR1) family protein
LocationCp4.1LG12 : 9318962 .. 9321871 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCGCCATTAATGCGTGAAGAAAGGATGAACCGCCATTAATGAGTGAAGAAGAATTAATGGAAGGGGAGAAACACGACACTTCGGCTTAGGACACTCATGATCTCCAACCTTTCTCTTGCCAAAGCACTTTTGGAAGTTTTCAAGTAATTCTTGTTTTGGATCGAGACAAAAACAGTTATGATTTGGATTTGCTTCAGAAATAATTTTTGTTTGATAGTCATTCGATTTTTTTTTTTTTTTTTTATTTATGTTACTTTTTTTAGAACTTATCGTTTCCGAAAATTTGTATTCTTAATCAACATGCATAAAAAAGGATGAACAGTGTTTTCTTTATTAAATTTATTTATTTTGCGATATAAATTCTATAATTCTTCTCAACATGCATAAAAAAATTACGAAATTTACTCGGTTGAAAATTCAAATTAGTTTTAAGAGTTTGTAGTTAGAAAATGTAGTCAGCTACACTCAATGATCTGATCGTCTTTATTGGTGAATTAGAAAGGATGAACAGTTTTAGTGAACATAATATAGATTTTCACTCCCCATACTTCACCAAAGAAATGCACTGTTTGCCAAAGATCTCCATTTCAGCGACTGAAAGCTTCTCGATTCAAGATTCACTATACACCGACCGGAAACACAGAAGAAATGAGATTGAGTTCCGAAGAATTCTTGGCGTCGAATGCAATTCGAATAATCAAGGAACAGTGAGTCCTAACTTCGTGTATTGGGAGAAATCAAAGTGAGTTTCTCGATTCCGCATTCTTCAGATTGTTCTTACGGCAATCGCCATCAATTTATTCTATTCTCGCTTCGATTCTTCGAAGTAGTATCTATTTCTCTTCCATATTTGATGAATTCGGAAAAATTCGGCTTGTTTTTCTGGTAGTGGATGGAATCCCCACTGCGATCGAGGATGGAGATGTTGTAGAAAACCCTAGCGGGAAGCCTTTGGCCAGAATAGTTTCTGAAGCTGAGGCAATTGCGACTAATATTTCAGATACAGAGCCATATGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCATATGCTTCACGACTTGGTTTTATTATACGCGTTGATGCATTTCGTCGGTCCATGCGTGATGGTTCGGTTGTTTGGCGACGACTTGTTTGTAACAAAGAGGGGTTTCGCAAGTTTAGGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACACGAGAAGGATGTAAGGCAATGGTTGTTGTGAAGAAAGAGAAATCTGGAAAATGGATTGTAACGAAGTTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTTCTATCACACACACGGGTGAGGACTTACTTTGATTCACTTTGTATTCATTTACGCTCAGATTATGTGTTTTTCTAGTTTCTTAACTCATTCTCTAAGTATTCTACCTTTGATTCAATGATGTACTTCAGCTTTCCAAGTTCATTTGCTTCAAAAAGAGCAAATGGGTATCATTTTATTTGTTGAATTTCTTTGGTGTGGTGTGTGGCCTCATGTTCTGATCAGGTCATCCATCTTGAGCTTTTTTTGAATAAATTAGAATTGATTGGAGCCACTGTATAGCCACTCTAGACTAGAAAATTTTCAGTGTTATAGTGCTTGTTTCAAACCATATAGTGGTTTCCTCCATATGCTTGGACGTTTCTTTATGAACTGTAGTTTTATTGGCAAACTTGGTCTTACTGCCTTCATCTTCCATTTCTTCAAGGTTGTTGTAACTTTAGGTGGGGTGGTCGTATGAAGCATTCTTTACCCTTCTTTACAAGGGTGTGAAAACCTCTCCCTAGTAGACGGGTTTAAGACAATATTTGCTAGTGGGGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGATACCGGGCGATGTGCCAACGAGGAGGTCCCACGTCGATGGGAGAGGGGAACGAGTGCCAGCAAGAATGCTAGGCCCCAAAGGGGATGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTTTCTAGCGTACGTGTTTTAAAACCTTAAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAAGACAATATATGCTAGCGGTTGAGTTGTACTGTTACATCCTACTTCCATTAGAGGTAAGGCTCCAAGCAGATAAACCATGTCGTGTGGTTTTGAGCGTTGAGCTTCTTGATTTCTTGATTTCTCAAACAACTTAAAGGTCTTGCATCTTATTGTAATGACAAAAGCTTCACAGTCCTTTGATTTTACACGATCTTCAAAAGCTTCACTATAGTGAGAAATGCTATCTTGGCTTTTGAGGTCGAAGGATCAATCTCCAACACATGCTCCACATGTTTCTTAAGTATTATGTATGCTGTACTGAATCCCCTCCCCCATCCCAAAGGGAAGTGTCTTGATTTTTACCTCCTTTTTCTACACATGAACTCAATATAGTGTACAAGATACATTGTTTATATATCTTCATGTTTCTGTTACTATTATTTCAGGATGAGAAAGATGCAAAAATTCGAGAATTAACTGCCGAACTGCAGCTAGAACGAAAGCGATGCGCAGCTTATCAAGAACAGCTTGCCATGATATTAAGAGACATGGAAGAACACTCGAATCATCTGGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAGCAATACATTTTCAAATAGCTAACAACAGAATCCAAAGAGAATATATATATATTTTTGTAAAATTTTCTATTATTACTGTTTATATTGTTCATTAATCCTGCCCTTTTCCCTCCCATTTTGTGATTTGTATGGCTAAAGTTTAATAATATCGCCCTTGGTCCACAGATCAAGGG

mRNA sequence

AACCGCCATTAATGCGTGAAGAAAGGATGAACCGCCATTAATGAGTGAAGAAGAATTAATGGAAGGGGAGAAACACGACACTTCGGCTTAGGACACTCATGATCTCCAACCTTTCTCTTGCCAAAGCACTTTTGGAAGTTTTCAAGTAATTCTTGTTTTGGATCGAGACAAAAACAGTTATGATTTGGATTTGCTTCAGAAATAATTTTTGTTTGATAGTCATTCGATTTTTTTTTTTTTTTTTTATTTATGTTACTTTTTTTAGAACTTATCGTTTCCGAAAATTTGTATTCTTAATCAACATGCATAAAAAAGGATGAACAGTGTTTTCTTTATTAAATTTATTTATTTTGCGATATAAATTCTATAATTCTTCTCAACATGCATAAAAAAATTACGAAATTTACTCGGTTGAAAATTCAAATTAGTTTTAAGAGTTTGTAGTTAGAAAATGTAGTCAGCTACACTCAATGATCTGATCGTCTTTATTGGTGAATTAGAAAGGATGAACAGTTTTAGTGAACATAATATAGATTTTCACTCCCCATACTTCACCAAAGAAATGCACTGTTTGCCAAAGATCTCCATTTCAGCGACTGAAAGCTTCTCGATTCAAGATTCACTATACACCGACCGGAAACACAGAAGAAATGAGATTGAGTTCCGAAGAATTCTTGGCGTCGAATGCAATTCGAATAATCAAGGAACAGTGAGTCCTAACTTCGTGTATTGGGAGAAATCAAATATCTATTTCTCTTCCATATTTGATGAATTCGGAAAAATTCGGCTTGTTTTTCTGGTAGTGGATGGAATCCCCACTGCGATCGAGGATGGAGATGTTGTAGAAAACCCTAGCGGGAAGCCTTTGGCCAGAATAGTTTCTGAAGCTGAGGCAATTGCGACTAATATTTCAGATACAGAGCCATATGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCATATGCTTCACGACTTGGTTTTATTATACGCGTTGATGCATTTCGTCGGTCCATGCGTGATGGTTCGGTTGTTTGGCGACGACTTGTTTGTAACAAAGAGGGGTTTCGCAAGTTTAGGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACACGAGAAGGATGTAAGGCAATGGTTGTTGTGAAGAAAGAGAAATCTGGAAAATGGATTGTAACGAAGTTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTTCTATCACACACACGGGATGAGAAAGATGCAAAAATTCGAGAATTAACTGCCGAACTGCAGCTAGAACGAAAGCGATGCGCAGCTTATCAAGAACAGCTTGCCATGATATTAAGAGACATGGAAGAACACTCGAATCATCTGGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAGCAATACATTTTCAAATAGCTAACAACAGAATCCAAAGAGAATATATATATATTTTTGTAAAATTTTCTATTATTACTGTTTATATTGTTCATTAATCCTGCCCTTTTCCCTCCCATTTTGTGATTTGTATGGCTAAAGTTTAATAATATCGCCCTTGGTCCACAGATCAAGGG

Coding sequence (CDS)

ATGAACAGTTTTAGTGAACATAATATAGATTTTCACTCCCCATACTTCACCAAAGAAATGCACTGTTTGCCAAAGATCTCCATTTCAGCGACTGAAAGCTTCTCGATTCAAGATTCACTATACACCGACCGGAAACACAGAAGAAATGAGATTGAGTTCCGAAGAATTCTTGGCGTCGAATGCAATTCGAATAATCAAGGAACAGTGAGTCCTAACTTCGTGTATTGGGAGAAATCAAATATCTATTTCTCTTCCATATTTGATGAATTCGGAAAAATTCGGCTTGTTTTTCTGGTAGTGGATGGAATCCCCACTGCGATCGAGGATGGAGATGTTGTAGAAAACCCTAGCGGGAAGCCTTTGGCCAGAATAGTTTCTGAAGCTGAGGCAATTGCGACTAATATTTCAGATACAGAGCCATATGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCATATGCTTCACGACTTGGTTTTATTATACGCGTTGATGCATTTCGTCGGTCCATGCGTGATGGTTCGGTTGTTTGGCGACGACTTGTTTGTAACAAAGAGGGGTTTCGCAAGTTTAGGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACACGAGAAGGATGTAAGGCAATGGTTGTTGTGAAGAAAGAGAAATCTGGAAAATGGATTGTAACGAAGTTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTTCTATCACACACACGGGATGAGAAAGATGCAAAAATTCGAGAATTAACTGCCGAACTGCAGCTAGAACGAAAGCGATGCGCAGCTTATCAAGAACAGCTTGCCATGATATTAAGAGACATGGAAGAACACTCGAATCATCTGGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAGCAATACATTTTCAAATAGCTAA

Protein sequence

MNSFSEHNIDFHSPYFTKEMHCLPKISISATESFSIQDSLYTDRKHRRNEIEFRRILGVECNSNNQGTVSPNFVYWEKSNIYFSSIFDEFGKIRLVFLVVDGIPTAIEDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS
Homology
[Close]
BLAST of Cp4.1LG12g10580 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.8e-31
Identity = 71/147 (48.30%), Postives = 98/147 (66.67%), Query Frame = 1 

Query: 106 AIEDGDVVENP---SGKPLA----RIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDA 165
           A++D D++++P    G  L           E  A ++ D EPY G+EFESEE+AK FY++
Sbjct: 32  ALDDDDMLDSPIMPCGNGLVGNSGNYFPNQEEEACDLLDLEPYDGLEFESEEAAKAFYNS 91

Query: 166 YASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENR---KPRAITREGCK 225
           YA R+GF  RV + RRS RDG+++ R+ VC KEGFR    KR+++R   +PR ITR GCK
Sbjct: 92  YARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCK 151

Query: 226 AMVVVKKEKSGKWIVTKFVKDHNHPLI 243
           A + VK + SGKW+V+ FVKDHNH L+
Sbjct: 152 ASLSVKMQDSGKWLVSGFVKDHNHELV 178

[Close]
BLAST of Cp4.1LG12g10580 vs. Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1 

Query: 136 SDTEPYVGMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRK 195
           S  EPYVG+EF++ E A+ FY+AYA+R GF +R     RS  DG+V  RR VC+KEGF  
Sbjct: 39  SGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF-- 98

Query: 196 FRPKRSENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPL 242
                      +  +R GC A + V++  +GKW++ +  K+HNH L
Sbjct: 99  -----------QLNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

[Close]
BLAST of Cp4.1LG12g10580 vs. Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.7e-17
Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 1 

Query: 124 IVSEAEAIATNISDT--EPYVGMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSV 183
           +V     IA N  D+  EPYVG+EF++ E A+ +Y++YA+R GF +R     RS  DG+V
Sbjct: 10  MVGTNNGIAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTV 69

Query: 184 VWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPL 242
             RR VC+KEGF             +  +R GC A + V++  +GKW++ +  K+HNH L
Sbjct: 70  SSRRFVCSKEGF-------------QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116

[Close]
BLAST of Cp4.1LG12g10580 vs. Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-13
Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = 1 

Query: 143 GMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSE 202
           GM+FES+E+A  FY  YA  +GF I + A RRS R G  +  ++ C++ G ++   +++ 
Sbjct: 41  GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKR---EKAT 100

Query: 203 NRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPL 242
              PR+  + GCKA + +K+++  KW++  FVK+HNH +
Sbjct: 101 AINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEI 136

[Close]
BLAST of Cp4.1LG12g10580 vs. Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.2e-13
Identity = 47/161 (29.19%), Postives = 82/161 (50.93%), Query Frame = 1 

Query: 137 DTEPYVGMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKF 196
           D EP  G++F++ E+A +FY  YA  +GF   +   RRS +    +  +  C++ G    
Sbjct: 48  DLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPE 107

Query: 197 RPKRSENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPLIVTPASA-----RRN 256
                 + +   + +  CKA + VK+   GKWI+ +FVKDHNH L+  PA A     +RN
Sbjct: 108 SESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL--PALAYHFRIQRN 167

Query: 257 VLLSHTRD-EKDAKIRELTAELQLERKRCAAYQEQLAMILR 292
           V L+   + +    + E T ++ +E  R +   + +  +L+
Sbjct: 168 VKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNIGSLLQ 206

[Close]
BLAST of Cp4.1LG12g10580 vs. TrEMBL
Match: A0A0A0KA59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372900 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 5.1e-103
Identity = 193/225 (85.78%), Postives = 212/225 (94.22%), Query Frame = 1 

Query: 100 VDGIPTAIEDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAY 159
           +DGIP+ +   +VVE+PSGK  AR V+EAEAI +N SDTEP+VGMEFESEES KVFYDAY
Sbjct: 1   MDGIPSVL---NVVEDPSGKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAY 60

Query: 160 ASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 219
           ASRLGFI+RVDAFRRSMRDG+VVWRRLVCNKEGFRKF+PKRSENRKPRA+TREGCKAMVV
Sbjct: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVV 120

Query: 220 VKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRC 279
           VKKEK+GKW+VTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQ ERKRC
Sbjct: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRC 180

Query: 280 AAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS 325
           AAYQEQLAMIL DMEEHSNHLARNID+I+QSV+DIES++N FSNS
Sbjct: 181 AAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 222

[Close]
BLAST of Cp4.1LG12g10580 vs. TrEMBL
Match: M5VKI9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011264mg PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.8e-84
Identity = 168/217 (77.42%), Postives = 185/217 (85.25%), Query Frame = 1 

Query: 108 EDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFII 167
           +D DV+E+ +GK    + SE        SD EPYVGMEFESEE+AKVFYDAYA+ LGFI+
Sbjct: 9   KDEDVIESSNGKDA--VTSEGN------SDMEPYVGMEFESEEAAKVFYDAYATHLGFIM 68

Query: 168 RVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGK 227
           RVDAFRRSMRDG VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAM+VVKKEKSGK
Sbjct: 69  RVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKRSENRKPRAITREGCKAMIVVKKEKSGK 128

Query: 228 WIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLA 287
           WIVT+FVK+HNHPL+VTPA+ RR VLLS T DEKD KIRELTAELQ ERKR AAYQEQL 
Sbjct: 129 WIVTRFVKEHNHPLVVTPANGRRTVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLD 188

Query: 288 MILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS 325
           M+LR+MEEHSNHL+RNID IVQSVK+IESK    SNS
Sbjct: 189 MVLREMEEHSNHLSRNIDGIVQSVKEIESKRVAPSNS 217

[Close]
BLAST of Cp4.1LG12g10580 vs. TrEMBL
Match: A0A067L9X3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15096 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.0e-82
Identity = 160/221 (72.40%), Postives = 185/221 (83.71%), Query Frame = 1 

Query: 100 VDGIPTAIEDGD---VVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFY 159
           +D  P+  EDGD   +VE+ + K +              SD EPYVGMEFESEESAKVFY
Sbjct: 1   MDEQPSVSEDGDMNQIVESSNSKEVTTTEGS--------SDMEPYVGMEFESEESAKVFY 60

Query: 160 DAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKA 219
           DAYA+RLGF++RVDAFRRSMRDG VVWRRLVCNKEGFRK RP+RSENRKPRA+TREGCKA
Sbjct: 61  DAYATRLGFMMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKA 120

Query: 220 MVVVKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLER 279
           M+VVKKEK+GKWIVT+FVK+HNHPL+ TP++ RR VLLS T DEKD KIRELTAELQ ER
Sbjct: 121 MIVVKKEKTGKWIVTRFVKEHNHPLVATPSNGRRTVLLSQTPDEKDVKIRELTAELQRER 180

Query: 280 KRCAAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIESK 318
           KR AAYQ+QL M+LR+MEEHSNHL+RNI+DIVQSV++IESK
Sbjct: 181 KRSAAYQQQLDMVLREMEEHSNHLSRNIEDIVQSVREIESK 213

[Close]
BLAST of Cp4.1LG12g10580 vs. TrEMBL
Match: F6I1W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0174g00120 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.8e-82
Identity = 159/217 (73.27%), Postives = 184/217 (84.79%), Query Frame = 1 

Query: 108 EDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFII 167
           EDG+++E+ +GK L  +  E        S+ EP+VGMEFESEE+AKVFYD YA+ LGFI+
Sbjct: 40  EDGEMIESSNGKEL--VAHEGN------SEMEPHVGMEFESEEAAKVFYDTYATHLGFIM 99

Query: 168 RVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGK 227
           RVDAFRRSMRDG VVWRRLVCNKEGFRK RP+RSENRKPRAITREGCKAM+VVKKEK+GK
Sbjct: 100 RVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAITREGCKAMIVVKKEKTGK 159

Query: 228 WIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLA 287
           W+VT+FVK+HNH L+ TPA++RR VLLS T DEKD KIRELTAELQ ERKRCAA+QEQL 
Sbjct: 160 WVVTRFVKEHNHQLVATPANSRRTVLLSQTPDEKDIKIRELTAELQRERKRCAAFQEQLD 219

Query: 288 MILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS 325
           M+LRDMEEHSNHL+RNID IVQSV++IESK    S S
Sbjct: 220 MVLRDMEEHSNHLSRNIDGIVQSVREIESKKIVHSQS 248

[Close]
BLAST of Cp4.1LG12g10580 vs. TrEMBL
Match: B9SMQ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1627500 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.5e-81
Identity = 156/210 (74.29%), Postives = 180/210 (85.71%), Query Frame = 1 

Query: 108 EDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFII 167
           EDG+ ++        + V+ AE      SD EPYVGMEFESEE+AKVFYDAYA+RLGFI+
Sbjct: 3   EDGEDMDQTVDSSNGKEVTTAE----ESSDMEPYVGMEFESEEAAKVFYDAYATRLGFIM 62

Query: 168 RVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGK 227
           RVDAFRRSMRDG VVWRRLVCNKEGFRK RP+RSENRKPRAITREGCKAM+VVKKEK+GK
Sbjct: 63  RVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAITREGCKAMIVVKKEKTGK 122

Query: 228 WIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLA 287
           W+VT+FVK+HNHPL+  P++ RR+VLLS T DEKD KIRELTAELQ ERKR AAYQEQL 
Sbjct: 123 WVVTRFVKEHNHPLVAIPSNGRRSVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLY 182

Query: 288 MILRDMEEHSNHLARNIDDIVQSVKDIESK 318
            +LRDMEEHSNHL+RNI+D+VQSV++IESK
Sbjct: 183 TVLRDMEEHSNHLSRNIEDVVQSVREIESK 208

[Close]
BLAST of Cp4.1LG12g10580 vs. TAIR10
Match: AT3G07500.1 (AT3G07500.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-71
Identity = 135/215 (62.79%), Postives = 170/215 (79.07%), Query Frame = 1 

Query: 108 EDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFII 167
           ED +++EN     +  +  EA  +       EP++GMEFESEE+AK FYD YA+ +GF++
Sbjct: 9   EDVEMMENSD--VMKTVTDEASPMV------EPFIGMEFESEEAAKSFYDNYATCMGFVM 68

Query: 168 RVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGK 227
           RVDAFRRSMRDG+VVWRRLVCNKEGFR+ RP+RSE+RKPRAITREGCKA++VVK+EKSG 
Sbjct: 69  RVDAFRRSMRDGTVVWRRLVCNKEGFRRSRPRRSESRKPRAITREGCKALIVVKREKSGT 128

Query: 228 WIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLA 287
           W+VTKF K+HNHPL+    + RRN  L  T DEKDAKIREL+AEL  ER+RC A Q+QL 
Sbjct: 129 WLVTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKDAKIRELSAELSRERRRCTALQQQLD 188

Query: 288 MILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFS 323
           M+L++MEEHSNHL  NI+ ++QSV+DIE  SNTF+
Sbjct: 189 MVLKEMEEHSNHLTININSVIQSVRDIE--SNTFT 213

[Close]
BLAST of Cp4.1LG12g10580 vs. TAIR10
Match: AT2G43280.1 (AT2G43280.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-46
Identity = 93/178 (52.25%), Postives = 130/178 (73.03%), Query Frame = 1 

Query: 139 EPYVGMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFR-KFR 198
           EP  G+ FESE++AK+FYD Y+ RLGF++RV + RRS +DG ++ RR  CNKEG     R
Sbjct: 21  EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR 80

Query: 199 PKRSENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHT 258
            K    RKPR  TREGCKAM+ VK ++SGKW++TKFVK+HNHPL+V+P  AR      HT
Sbjct: 81  GKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREAR------HT 140

Query: 259 RDEKDAKIRELTAELQLERKRCAAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIE 316
            DEKD +I+ELT EL+ +++ CAAY+EQL    + +EEHSN +A+ ++++V ++K+ E
Sbjct: 141 LDEKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFE 192

[Close]
BLAST of Cp4.1LG12g10580 vs. TAIR10
Match: AT3G59470.1 (AT3G59470.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-41
Identity = 89/192 (46.35%), Postives = 126/192 (65.62%), Query Frame = 1 

Query: 128 AEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLV 187
           A A  T     EPYVG EFESE +A  FY+AYA+++GF+IRV    RS  DGS + R+LV
Sbjct: 58  AVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLV 117

Query: 188 CNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPLIVTPAS 247
           CNKEG+R    KR +  + RA TR GCKAM++++KE SGKW++TKFVK+HNH L+  P  
Sbjct: 118 CNKEGYR-LPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM--PGR 177

Query: 248 ARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLAMILRDMEEHSNHLARNIDDI 307
            RR  +     +E D KI+EL  +L  E+KR A Y+  L M+   +E+H+  L++ I  I
Sbjct: 178 VRRGCIYDQYPNEHD-KIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHI 237

Query: 308 VQSVKDIESKSN 320
           V +V+++E + +
Sbjct: 238 VDNVRNLEQRDH 245

[Close]
BLAST of Cp4.1LG12g10580 vs. TAIR10
Match: AT4G12850.1 (AT4G12850.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 145.2 bits (365), Expect = 7.0e-35
Identity = 76/182 (41.76%), Postives = 117/182 (64.29%), Query Frame = 1 

Query: 139 EPYVGMEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRP 198
           EPYVG++FESEE AK FY  Y+ RLGF++R+   RRS  DG  + RRL CNK+G   F P
Sbjct: 9   EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQG---FGP 68

Query: 199 KRSENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTR 258
               +    + +REGCKA ++VK EKSGKW+VT+F+K+HNH L    +S+  +       
Sbjct: 69  NNQRSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDSFA----- 128

Query: 259 DEKDAKIRELTAELQLERKRCAAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIESKS 318
            +K+ KI+ELT E++ + + C  Y+++L   + ++E ++  L+  + DIV++VK +E + 
Sbjct: 129 -DKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLECQI 181

Query: 319 NT 321
            T
Sbjct: 189 QT 181

[Close]
BLAST of Cp4.1LG12g10580 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 136.3 bits (342), Expect = 3.2e-32
Identity = 71/147 (48.30%), Postives = 98/147 (66.67%), Query Frame = 1 

Query: 106 AIEDGDVVENP---SGKPLA----RIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDA 165
           A++D D++++P    G  L           E  A ++ D EPY G+EFESEE+AK FY++
Sbjct: 32  ALDDDDMLDSPIMPCGNGLVGNSGNYFPNQEEEACDLLDLEPYDGLEFESEEAAKAFYNS 91

Query: 166 YASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENR---KPRAITREGCK 225
           YA R+GF  RV + RRS RDG+++ R+ VC KEGFR    KR+++R   +PR ITR GCK
Sbjct: 92  YARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCK 151

Query: 226 AMVVVKKEKSGKWIVTKFVKDHNHPLI 243
           A + VK + SGKW+V+ FVKDHNH L+
Sbjct: 152 ASLSVKMQDSGKWLVSGFVKDHNHELV 178

[Close]
BLAST of Cp4.1LG12g10580 vs. NCBI nr
Match: gi|659092823|ref|XP_008447236.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 2.5e-106
Identity = 197/225 (87.56%), Postives = 215/225 (95.56%), Query Frame = 1 

Query: 100 VDGIPTAIEDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAY 159
           +DGIPT +   DVVE+PSGK  AR+V+EAEAI +N+SDTEP+VGMEFESEES KVFYDAY
Sbjct: 1   MDGIPTVV---DVVEDPSGKDFARVVTEAEAITSNLSDTEPFVGMEFESEESVKVFYDAY 60

Query: 160 ASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 219
           ASRLGFI+RVDAFRRSMRDG+VVWRRLVCNKEGFRKF+PKRSENRKPRA+TREGCKAMVV
Sbjct: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVV 120

Query: 220 VKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRC 279
           VKKEK+GKW+VTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQ ERKRC
Sbjct: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRC 180

Query: 280 AAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS 325
           AAYQEQLAMILRDMEEHSNHLARNID+I+QSV+DIESK+N FSNS
Sbjct: 181 AAYQEQLAMILRDMEEHSNHLARNIDNIIQSVRDIESKNNAFSNS 222

[Close]
BLAST of Cp4.1LG12g10580 vs. NCBI nr
Match: gi|449465248|ref|XP_004150340.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 7.4e-103
Identity = 193/225 (85.78%), Postives = 212/225 (94.22%), Query Frame = 1 

Query: 100 VDGIPTAIEDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAY 159
           +DGIP+ +   +VVE+PSGK  AR V+EAEAI +N SDTEP+VGMEFESEES KVFYDAY
Sbjct: 1   MDGIPSVL---NVVEDPSGKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAY 60

Query: 160 ASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 219
           ASRLGFI+RVDAFRRSMRDG+VVWRRLVCNKEGFRKF+PKRSENRKPRA+TREGCKAMVV
Sbjct: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVV 120

Query: 220 VKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRC 279
           VKKEK+GKW+VTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQ ERKRC
Sbjct: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRC 180

Query: 280 AAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS 325
           AAYQEQLAMIL DMEEHSNHLARNID+I+QSV+DIES++N FSNS
Sbjct: 181 AAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 222

[Close]
BLAST of Cp4.1LG12g10580 vs. NCBI nr
Match: gi|659092825|ref|XP_008447237.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X2 [Cucumis melo])

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89
Identity = 168/181 (92.82%), Postives = 178/181 (98.34%), Query Frame = 1 

Query: 144 MEFESEESAKVFYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSEN 203
           MEFESEES KVFYDAYASRLGFI+RVDAFRRSMRDG+VVWRRLVCNKEGFRKF+PKRSEN
Sbjct: 1   MEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSEN 60

Query: 204 RKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDA 263
           RKPRA+TREGCKAMVVVKKEK+GKW+VTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDA
Sbjct: 61  RKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDA 120

Query: 264 KIRELTAELQLERKRCAAYQEQLAMILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSN 323
           KIRELTAELQ ERKRCAAYQEQLAMILRDMEEHSNHLARNID+I+QSV+DIESK+N FSN
Sbjct: 121 KIRELTAELQQERKRCAAYQEQLAMILRDMEEHSNHLARNIDNIIQSVRDIESKNNAFSN 180

Query: 324 S 325
           S
Sbjct: 181 S 181

[Close]
BLAST of Cp4.1LG12g10580 vs. NCBI nr
Match: gi|1009151695|ref|XP_015893687.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Ziziphus jujuba])

HSP 1 Score: 323.6 bits (828), Expect = 4.1e-85
Identity = 163/217 (75.12%), Postives = 187/217 (86.18%), Query Frame = 1 

Query: 108 EDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFII 167
           +DGD +++ SGK +A         A   S+ EPYVGMEFESEE+AKVFYDAYA+ LGFI+
Sbjct: 9   DDGDAIDDSSGKEIAT--------AEGSSEMEPYVGMEFESEEAAKVFYDAYATSLGFIM 68

Query: 168 RVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGK 227
           RVDAFRRSMRDG VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAM+VVKKEK+GK
Sbjct: 69  RVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMIVVKKEKTGK 128

Query: 228 WIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLA 287
           W+VT+FVK+HNHPL+VTPA+ RR++LLS T DEKD KIRELTAELQ ERKR AAYQEQL 
Sbjct: 129 WVVTRFVKEHNHPLVVTPANGRRSMLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLD 188

Query: 288 MILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS 325
           ++LR+MEEHS+HL+RNIDDI+QSVKDIESK    SNS
Sbjct: 189 IVLREMEEHSSHLSRNIDDIIQSVKDIESKRLAVSNS 217

[Close]
BLAST of Cp4.1LG12g10580 vs. NCBI nr
Match: gi|595793413|ref|XP_007200455.1| (hypothetical protein PRUPE_ppa011264mg [Prunus persica])

HSP 1 Score: 320.9 bits (821), Expect = 2.6e-84
Identity = 168/217 (77.42%), Postives = 185/217 (85.25%), Query Frame = 1 

Query: 108 EDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAYASRLGFII 167
           +D DV+E+ +GK    + SE        SD EPYVGMEFESEE+AKVFYDAYA+ LGFI+
Sbjct: 9   KDEDVIESSNGKDA--VTSEGN------SDMEPYVGMEFESEEAAKVFYDAYATHLGFIM 68

Query: 168 RVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVVVKKEKSGK 227
           RVDAFRRSMRDG VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAM+VVKKEKSGK
Sbjct: 69  RVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKRSENRKPRAITREGCKAMIVVKKEKSGK 128

Query: 228 WIVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQLERKRCAAYQEQLA 287
           WIVT+FVK+HNHPL+VTPA+ RR VLLS T DEKD KIRELTAELQ ERKR AAYQEQL 
Sbjct: 129 WIVTRFVKEHNHPLVVTPANGRRTVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLD 188

Query: 288 MILRDMEEHSNHLARNIDDIVQSVKDIESKSNTFSNS 325
           M+LR+MEEHSNHL+RNID IVQSVK+IESK    SNS
Sbjct: 189 MVLREMEEHSNHLSRNIDGIVQSVKEIESKRVAPSNS 217

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g10580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FRS5_ARATH5.8e-3148.30Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1[more]
FRS12_ARATH1.2e-1742.45Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1[more]
FRS7_ARATH4.7e-1739.17Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1[more]
FRS2_ARATH1.9e-1337.37Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1[more]
FAR1_ARATH4.2e-1329.19Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1[more]
BLAST of Cp4.1LG12g10580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA59_CUCSA5.1e-10385.78Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372900 PE=4 SV=1[more]
M5VKI9_PRUPE1.8e-8477.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011264mg PE=4 SV=1[more]
A0A067L9X3_JATCU1.0e-8272.40Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15096 PE=4 SV=1[more]
F6I1W9_VITVI3.8e-8273.27Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0174g00120 PE=4 SV=... [more]
B9SMQ2_RICCO2.5e-8174.29Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1627500 PE=4 SV=1[more]
BLAST of Cp4.1LG12g10580 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07500.12.7e-7162.79 Far-red impaired responsive (FAR1) family protein[more]
AT2G43280.11.4e-4652.25 Far-red impaired responsive (FAR1) family protein[more]
AT3G59470.11.0e-4146.35 Far-red impaired responsive (FAR1) family protein[more]
AT4G12850.17.0e-3541.76 Far-red impaired responsive (FAR1) family protein[more]
AT4G38180.13.2e-3248.30 FAR1-related sequence 5[more]
BLAST of Cp4.1LG12g10580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092823|ref|XP_008447236.1|2.5e-10687.56PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Cucumis melo][more]
gi|449465248|ref|XP_004150340.1|7.4e-10385.78PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis sativus][more]
gi|659092825|ref|XP_008447237.1|1.6e-8992.82PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X2 [Cucumis melo][more]
gi|1009151695|ref|XP_015893687.1|4.1e-8575.12PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Ziziphus jujuba][more]
gi|595793413|ref|XP_007200455.1|2.6e-8477.42hypothetical protein PRUPE_ppa011264mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR004330FAR1_DNA_bnd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g10580.1Cp4.1LG12g10580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 155..242
score: 1.2
NoneNo IPR availableunknownCoilCoilcoord: 258..285
scor
NoneNo IPR availablePANTHERPTHR31669:SF46FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEINcoord: 65..317
score: 1.1E