CSPI07G15160 (gene) Wild cucumber (PI 183967)

NameCSPI07G15160
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionFar-red impaired responsive (FAR1) family protein
LocationChr7 : 13859799 .. 13862954 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAATTTGATATTGAGCCTCAATTTTGGGTGAGCACCACAAATCTCTCAATCTTCTCAAGTTTCCGGTTTAGTCCATACTCAGTAAACCCCCCCTACCATATCCAAAGATATTGATTTCAACGACTAAAACCTTCTTGATTCACACCTTACTGTACAACTACCGCAAAACACCAAAGAAATGAGATTGGGTCTCCAACAATTTTCGACCTCCAATTCAATTCCAATAATCAAGGAACAGTGAATCCCAACTTCCTCTTTTGGGAGAAATCAAAGTGAGTTTCTCGATTCCGCATTCTTTGACATTTTTCATATCACAATCGCCCCCTATTTCTTCTATTCTCGCTTCAATTATTCAAACTAGTATCTATTTCCACCCCATATTTGATGAATTCAGAACAATTCGGCTTTTTTTTTTCTCTCTCCCTGTTAGTGGATGGAATCCCCAGTGTACTTAATGTTGTAGAAGACCCTAGCGAGAAAGATTTTGCCAGAGCAGTTACTGAAGCAGAGGCAATAACGAGTAATAATTCAGATACAGAGCCATTTGTTGGTATGGAGTTTGAATCTGAGGAGTCTGTCAAGGTTTTCTACGATGCTTATGCTTCACGTCTCGGTTTTATTATGCGCGTTGATGCATTTCGTAGATCGATGCGTGATGGTGCGGTTGTTTGGCGGCGACTTGTTTGTAATAAAGAAGGGTTTCGCAAGTTTAAGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTGTAACGAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAAAAAACTGGAAAATGGGTTGTTACGAAATTTGTCAAGGATCATAATCATCCATTGATTGTTACTCCGGCTAGTGCTCGTCGAAATGTTCTTCTTTCCCACACACGGGTAAGGGTTAATTTGATTCACTTTGTGTCTATTTTTACTGAGAAATATTTGTTTTTCTAGTTTCTTCTTTGCTCTTAAGTTCCACTTTCCGTACCTCTGTTCTGGAATAGTTTTTGTTGTAGCCTTTACCTTTGCCCTTAACAATAGAAACGGTTTGATAGAACTTGGAAGGAAAGGACTTTTAACTTCTAAGGGAGGCACCCATTATATAAATATATGTAATATTGAATACTGTAGAACTTCTATCTTTTCCTCTCTCTGATGAAACTTCAAAGAGTGTTCAGGCTGATGTCAGCCTTTAAAACTTCCATTCCACCCCTGAGTATGCGTCCCTTTTCTTAATACAAAAACCTGAACATTTGAAGCATGAGAACGTGAGGGGAATTAAAAGCATATCAATTAGATGTTTGTGTTAGGTGGAGGAAGAATGTCACTGGTATTCGTTAGATGTGCATGTTTGGTATGTAGTGAGGGAATTGTTGGACCTTGGAATTCAGGTGCCAAATAAGTGTTGAGTTTTGTTGGTTCAATTTGGTGGACTAGAAGGCAAAGATATTTAAGGATTGGATGAATTAGGGACGAGTTTCTTTGGAATTCATAAAATTTGGATGATGTATCCAATAATAGTGTGAGGTCATATTATTTGTATTTTGAAGCAAGGCTGGGTGTTTGTTTACCAATCACTATGCGACAATCAAATTTTAGAATATTTGTTTTTTAGCTTTCTTTACTCATCATTATTGATGTTAGGCAAATCTACCAGAGCCCTTTACGTACCCTGTTGTTAAAAAAAAAACCCCTTTTCTAACTGTGATATACTTAGCTTTCCAAGTCCATTCACTTCGAAAAGAACAAATAGGTGTACTATTTTATTTGTTGAATTTCTCGGGGTTTCTCTTGTTATGACCAGACAGTCCACATAGACTAATTGATCTTTCGTAAATGCATTAGAATCCACCAGAGGCACTGTATAGCCACTCTAGACTAGAAAATGTTCAGTTTTAATGCACCAATCTTATAGTGCTTGTTTATGGCCATGCTTCTGGTTTTGAGTGTCTAACTTCTTGATTTCTCAAACAACTTGGAGGTCTTGCAGCTCATTTAGATAGGGTAAAAGCCAAACAAAACTACCTAATGAGTTTCAATCTGAGCAAAGCTACGTAGGGTACCTATTAGGCTATTACTCTTCTTTTGGTTGGAGGTTGGAGGTTGGAGATTGAAATTAGGCTATTAGACTCCTATAGGTTGGAGGTTGGAGGTTCAATCTCCAACACATGCCCCATGTGTTGTAATGGGCAAAAAGATGCCCATTTTTGTAGGAAGGGTCAAACGAAATGCATTCAATCCAGATGGGTAAGAAAAGCTACATGAGAAAAGGGATAAATTATAAGGACCTTGAACTTTGTTCTTTGTTTAAAAAATACCCCTATTTTTTCAGAAGTTGCAATATTACCTTTGACCTCTCGTAAATATTTTAAAACTAAAAGTAAAAACAGTTTTATACTGTCATGAAAAGTTGAGTGTCTACATATGTGTTCTTTCATACTGAGTTTAGACAAATGTCCTAATCACACACATTGTTGCAGTTAAAATGTATATGGAGTTAATGCCATGTCAATTTTCTTTCCAACGTTCTAAACTTCAAGGGTAGTTTCATAACCTTTATGAAAAGTCATTGGTAATGCAACTTTTGAAAGAATGGGGATAGTTTTTGAAAAAAGGACGAAGTTTATTTTTATAATTTAGCCTTAGAAAAACATGCCAAGCGTTCCAATTGGGCAGCTTTAGACTTTATAGCATGTTTCTTTCTCTTATGCAAGTCAGAACGACTATATTTATGCTATACACTACCCCCTCCAGCAAAACACATTTCTTAAATATTATGAGCATCTTTTTTTACGTCATTTGTACATATGTTTCATTTTCTGTTGCTATTATTTTCAGGATGAGAAAGATGCAAAAATTCGAGAACTAACTGCCGAACTACAGCAAGAACGAAAGCGATGTGCAGCATATCAAGAACAGCTTGCCATGATTTTAGGAGACATGGAGGAACACTCAAATCATCTGGCAAGAAACATAGATAACATTATTCAAAGTGTGAGAGATATTGAATCAGAAAACAATGCATTTTCAAATAGCTAACAACAGAATCCTAAAGAAAATATATTTGTATATATCTGTTTATAGTTTATAGTTCAGAGTTGAGACTTACGTTACATTTGTTCATTAGTTCATTAGTTCATTAGTTCATTA

mRNA sequence

ATGGATGGAATCCCCAGTGTACTTAATGTTGTAGAAGACCCTAGCGAGAAAGATTTTGCCAGAGCAGTTACTGAAGCAGAGGCAATAACGAGTAATAATTCAGATACAGAGCCATTTGTTGGTATGGAGTTTGAATCTGAGGAGTCTGTCAAGGTTTTCTACGATGCTTATGCTTCACGTCTCGGTTTTATTATGCGCGTTGATGCATTTCGTAGATCGATGCGTGATGGTGCGGTTGTTTGGCGGCGACTTGTTTGTAATAAAGAAGGGTTTCGCAAGTTTAAGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTGTAACGAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAAAAAACTGGAAAATGGGTTGTTACGAAATTTGTCAAGGATCATAATCATCCATTGATTGTTACTCCGGCTAGTGCTCGTCGAAATGTTCTTCTTTCCCACACACGGGATGAGAAAGATGCAAAAATTCGAGAACTAACTGCCGAACTACAGCAAGAACGAAAGCGATGTGCAGCATATCAAGAACAGCTTGCCATGATTTTAGGAGACATGGAGGAACACTCAAATCATCTGGCAAGAAACATAGATAACATTATTCAAAGTGTGAGAGATATTGAATCAGAAAACAATGCATTTTCAAATAGCTAA

Coding sequence (CDS)

ATGGATGGAATCCCCAGTGTACTTAATGTTGTAGAAGACCCTAGCGAGAAAGATTTTGCCAGAGCAGTTACTGAAGCAGAGGCAATAACGAGTAATAATTCAGATACAGAGCCATTTGTTGGTATGGAGTTTGAATCTGAGGAGTCTGTCAAGGTTTTCTACGATGCTTATGCTTCACGTCTCGGTTTTATTATGCGCGTTGATGCATTTCGTAGATCGATGCGTGATGGTGCGGTTGTTTGGCGGCGACTTGTTTGTAATAAAGAAGGGTTTCGCAAGTTTAAGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTGTAACGAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAAAAAACTGGAAAATGGGTTGTTACGAAATTTGTCAAGGATCATAATCATCCATTGATTGTTACTCCGGCTAGTGCTCGTCGAAATGTTCTTCTTTCCCACACACGGGATGAGAAAGATGCAAAAATTCGAGAACTAACTGCCGAACTACAGCAAGAACGAAAGCGATGTGCAGCATATCAAGAACAGCTTGCCATGATTTTAGGAGACATGGAGGAACACTCAAATCATCTGGCAAGAAACATAGATAACATTATTCAAAGTGTGAGAGATATTGAATCAGAAAACAATGCATTTTCAAATAGCTAA
BLAST of CSPI07G15160 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 1

Query: 50  DTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKF 109
           D EP+ G+EFESEE+ K FY++YA R+GF  RV + RRS RDGA++ R+ VC KEGFR  
Sbjct: 70  DLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNM 129

Query: 110 KPKRSENR---KPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLI 156
             KR+++R   +PR +TR GCKA + VK + +GKW+V+ FVKDHNH L+
Sbjct: 130 NEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178

BLAST of CSPI07G15160 vs. Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.8e-17
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 1

Query: 49  SDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRK 108
           S  EP+VG+EF++ E  + FY+AYA+R GF +R     RS  DG V  RR VC+KEGF  
Sbjct: 39  SGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF-- 98

Query: 109 FKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPL 155
                      +  +R GC A + V++  TGKWV+ +  K+HNH L
Sbjct: 99  -----------QLNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

BLAST of CSPI07G15160 vs. Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.0e-16
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 1

Query: 43  AITSNNSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCN 102
           A    +S  EP+VG+EF++ E  + +Y++YA+R GF +R     RS  DG V  RR VC+
Sbjct: 18  AENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCS 77

Query: 103 KEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPL 155
           KEGF             +  +R GC A + V++  TGKWV+ +  K+HNH L
Sbjct: 78  KEGF-------------QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116

BLAST of CSPI07G15160 vs. Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 1

Query: 46  SNNSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEG 105
           S + D EP  G++F++ E+  +FY  YA  +GF   +   RRS +    +  +  C++ G
Sbjct: 44  SGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYG 103

Query: 106 FRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNV 165
                     + +   V +  CKA + VK+   GKW++ +FVKDHNH L+  PA      
Sbjct: 104 VTPESESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL--PA------ 163

Query: 166 LLSHTRDEKDAKIRE 181
           L  H R +++ K+ E
Sbjct: 164 LAYHFRIQRNVKLAE 170

BLAST of CSPI07G15160 vs. Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-12
Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = 1

Query: 42  EAITSNN-----SDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVW 101
           EA TS N     + +E   GM+FES+E+   FY  YA  +GF + + A RRS R G  + 
Sbjct: 22  EASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFID 81

Query: 102 RRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPL 155
            ++ C++ G ++   +++    PR+  + GCKA + +K+++  KWV+  FVK+HNH +
Sbjct: 82  VKIACSRFGTKR---EKATAINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEI 136

BLAST of CSPI07G15160 vs. TrEMBL
Match: A0A0A0KA59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372900 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.7e-117
Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 1

Query: 16  VDGIPSVLNVVEDPSEKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASR 75
           +DGIPSVLNVVEDPS KDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASR
Sbjct: 1   MDGIPSVLNVVEDPSGKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASR 60

Query: 76  LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK 135
           LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK
Sbjct: 61  LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK 120

Query: 136 EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY 195
           EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY
Sbjct: 121 EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY 180

Query: 196 QEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 238
           QEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS
Sbjct: 181 QEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 222

BLAST of CSPI07G15160 vs. TrEMBL
Match: M5VKI9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011264mg PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.7e-82
Identity = 157/208 (75.48%), Postives = 182/208 (87.50%), Query Frame = 1

Query: 31  EKDFARAVTEAEAITSN-NSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSM 90
           ++D   +    +A+TS  NSD EP+VGMEFESEE+ KVFYDAYA+ LGFIMRVDAFRRSM
Sbjct: 10  DEDVIESSNGKDAVTSEGNSDMEPYVGMEFESEEAAKVFYDAYATHLGFIMRVDAFRRSM 69

Query: 91  RDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKD 150
           RDG VVWRRLVCNKEGFRK +PKRSENRKPRA+TREGCKAM+VVKKEK+GKW+VT+FVK+
Sbjct: 70  RDGKVVWRRLVCNKEGFRKTRPKRSENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKE 129

Query: 151 HNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEH 210
           HNHPL+VTPA+ RR VLLS T DEKD KIRELTAELQ+ERKR AAYQEQL M+L +MEEH
Sbjct: 130 HNHPLVVTPANGRRTVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLDMVLREMEEH 189

Query: 211 SNHLARNIDNIIQSVRDIESENNAFSNS 238
           SNHL+RNID I+QSV++IES+  A SNS
Sbjct: 190 SNHLSRNIDGIVQSVKEIESKRVAPSNS 217

BLAST of CSPI07G15160 vs. TrEMBL
Match: A0A067L9X3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15096 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.5e-80
Identity = 152/208 (73.08%), Postives = 178/208 (85.58%), Query Frame = 1

Query: 24  NVVEDPSEKDFARAVTEAEAITSN-NSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRV 83
           +V ED        +    E  T+  +SD EP+VGMEFESEES KVFYDAYA+RLGF+MRV
Sbjct: 6   SVSEDGDMNQIVESSNSKEVTTTEGSSDMEPYVGMEFESEESAKVFYDAYATRLGFMMRV 65

Query: 84  DAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWV 143
           DAFRRSMRDG VVWRRLVCNKEGFRK +P+RSENRKPRAVTREGCKAM+VVKKEKTGKW+
Sbjct: 66  DAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWI 125

Query: 144 VTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMI 203
           VT+FVK+HNHPL+ TP++ RR VLLS T DEKD KIRELTAELQ+ERKR AAYQ+QL M+
Sbjct: 126 VTRFVKEHNHPLVATPSNGRRTVLLSQTPDEKDVKIRELTAELQRERKRSAAYQQQLDMV 185

Query: 204 LGDMEEHSNHLARNIDNIIQSVRDIESE 231
           L +MEEHSNHL+RNI++I+QSVR+IES+
Sbjct: 186 LREMEEHSNHLSRNIEDIVQSVREIESK 213

BLAST of CSPI07G15160 vs. TrEMBL
Match: F6I1W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0174g00120 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.0e-79
Identity = 150/190 (78.95%), Postives = 169/190 (88.95%), Query Frame = 1

Query: 48  NSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFR 107
           NS+ EP VGMEFESEE+ KVFYD YA+ LGFIMRVDAFRRSMRDG VVWRRLVCNKEGFR
Sbjct: 59  NSEMEPHVGMEFESEEAAKVFYDTYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFR 118

Query: 108 KFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLL 167
           K +P+RSENRKPRA+TREGCKAM+VVKKEKTGKWVVT+FVK+HNH L+ TPA++RR VLL
Sbjct: 119 KLRPRRSENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHQLVATPANSRRTVLL 178

Query: 168 SHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDI 227
           S T DEKD KIRELTAELQ+ERKRCAA+QEQL M+L DMEEHSNHL+RNID I+QSVR+I
Sbjct: 179 SQTPDEKDIKIRELTAELQRERKRCAAFQEQLDMVLRDMEEHSNHLSRNIDGIVQSVREI 238

Query: 228 ESENNAFSNS 238
           ES+    S S
Sbjct: 239 ESKKIVHSQS 248

BLAST of CSPI07G15160 vs. TrEMBL
Match: A5BGK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030390 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.0e-79
Identity = 150/190 (78.95%), Postives = 169/190 (88.95%), Query Frame = 1

Query: 48  NSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFR 107
           NS+ EP VGMEFESEE+ KVFYD YA+ LGFIMRVDAFRRSMRDG VVWRRLVCNKEGFR
Sbjct: 16  NSEMEPHVGMEFESEEAAKVFYDTYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFR 75

Query: 108 KFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLL 167
           K +P+RSENRKPRA+TREGCKAM+VVKKEKTGKWVVT+FVK+HNH L+ TPA++RR VLL
Sbjct: 76  KLRPRRSENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHQLVATPANSRRTVLL 135

Query: 168 SHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDI 227
           S T DEKD KIRELTAELQ+ERKRCAA+QEQL M+L DMEEHSNHL+RNID I+QSVR+I
Sbjct: 136 SQTPDEKDIKIRELTAELQRERKRCAAFQEQLDMVLRDMEEHSNHLSRNIDGIVQSVREI 195

Query: 228 ESENNAFSNS 238
           ES+    S S
Sbjct: 196 ESKKIVHSQS 205

BLAST of CSPI07G15160 vs. TAIR10
Match: AT3G07500.1 (AT3G07500.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 263.1 bits (671), Expect = 1.7e-70
Identity = 126/178 (70.79%), Postives = 153/178 (85.96%), Query Frame = 1

Query: 52  EPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKP 111
           EPF+GMEFESEE+ K FYD YA+ +GF+MRVDAFRRSMRDG VVWRRLVCNKEGFR+ +P
Sbjct: 32  EPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRSRP 91

Query: 112 KRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTR 171
           +RSE+RKPRA+TREGCKA++VVK+EK+G W+VTKF K+HNHPL+    + RRN  L  T 
Sbjct: 92  RRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLPQTP 151

Query: 172 DEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDIES 230
           DEKDAKIREL+AEL +ER+RC A Q+QL M+L +MEEHSNHL  NI+++IQSVRDIES
Sbjct: 152 DEKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIES 209

BLAST of CSPI07G15160 vs. TAIR10
Match: AT2G43280.1 (AT2G43280.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-46
Identity = 97/196 (49.49%), Postives = 136/196 (69.39%), Query Frame = 1

Query: 46  SNNSDT---EPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCN 105
           SNN+D    EP  G+ FESE++ K+FYD Y+ RLGF+MRV + RRS +DG ++ RR  CN
Sbjct: 12  SNNTDDFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCN 71

Query: 106 KEGFR-KFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASA 165
           KEG     + K    RKPR  TREGCKAM+ VK +++GKWV+TKFVK+HNHPL+V+P  A
Sbjct: 72  KEGHCVSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREA 131

Query: 166 RRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNII 225
           R      HT DEKD +I+ELT EL+ +++ CAAY+EQL      +EEHSN +A+ ++N++
Sbjct: 132 R------HTLDEKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVV 191

Query: 226 QSVRDIESENNAFSNS 238
            ++++ E   +A   S
Sbjct: 192 NNLKEFEHLEHALLRS 201

BLAST of CSPI07G15160 vs. TAIR10
Match: AT3G59470.1 (AT3G59470.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 86/205 (41.95%), Postives = 131/205 (63.90%), Query Frame = 1

Query: 28  DPSEKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRR 87
           +  EK    ++  A A  +     EP+VG EFESE +   FY+AYA+++GF++RV    R
Sbjct: 45  EQDEKVDLDSIPLAVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSR 104

Query: 88  SMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFV 147
           S  DG+ + R+LVCNKEG+R    KR +  + RA TR GCKAM++++KE +GKWV+TKFV
Sbjct: 105 SRHDGSPIGRQLVCNKEGYR-LPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFV 164

Query: 148 KDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDME 207
           K+HNH L+  P   RR  +     +E D KI+EL  +L  E+KR A Y+  L M+   +E
Sbjct: 165 KEHNHSLM--PGRVRRGCIYDQYPNEHD-KIQELMQQLAAEKKRAATYKRHLEMLFEQIE 224

Query: 208 EHSNHLARNIDNIIQSVRDIESENN 233
           +H+  L++ I +I+ +VR++E  ++
Sbjct: 225 QHNESLSKRIQHIVDNVRNLEQRDH 245

BLAST of CSPI07G15160 vs. TAIR10
Match: AT4G12850.1 (AT4G12850.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-32
Identity = 70/179 (39.11%), Postives = 115/179 (64.25%), Query Frame = 1

Query: 52  EPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKP 111
           EP+VG++FESEE  K FY  Y+ RLGF++R+   RRS  DG  + RRL CNK+G   F P
Sbjct: 9   EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQG---FGP 68

Query: 112 KRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTR 171
               +    + +REGCKA ++VK EK+GKWVVT+F+K+HNH L    +S+  +       
Sbjct: 69  NNQRSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDSFA----- 128

Query: 172 DEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESE 231
            +K+ KI+ELT E++ + + C  Y+++L   + ++E ++  L+  + +I+++V+ +E +
Sbjct: 129 -DKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLECQ 178

BLAST of CSPI07G15160 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 127.9 bits (320), Expect = 8.5e-30
Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 1

Query: 50  DTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKF 109
           D EP+ G+EFESEE+ K FY++YA R+GF  RV + RRS RDGA++ R+ VC KEGFR  
Sbjct: 70  DLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNM 129

Query: 110 KPKRSENR---KPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLI 156
             KR+++R   +PR +TR GCKA + VK + +GKW+V+ FVKDHNH L+
Sbjct: 130 NEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178

BLAST of CSPI07G15160 vs. NCBI nr
Match: gi|449465248|ref|XP_004150340.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 3.9e-117
Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 1

Query: 16  VDGIPSVLNVVEDPSEKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASR 75
           +DGIPSVLNVVEDPS KDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASR
Sbjct: 1   MDGIPSVLNVVEDPSGKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASR 60

Query: 76  LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK 135
           LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK
Sbjct: 61  LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK 120

Query: 136 EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY 195
           EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY
Sbjct: 121 EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY 180

Query: 196 QEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 238
           QEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS
Sbjct: 181 QEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 222

BLAST of CSPI07G15160 vs. NCBI nr
Match: gi|659092823|ref|XP_008447236.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 5.8e-113
Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 1

Query: 16  VDGIPSVLNVVEDPSEKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASR 75
           +DGIP+V++VVEDPS KDFAR VTEAEAITSN SDTEPFVGMEFESEESVKVFYDAYASR
Sbjct: 1   MDGIPTVVDVVEDPSGKDFARVVTEAEAITSNLSDTEPFVGMEFESEESVKVFYDAYASR 60

Query: 76  LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK 135
           LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK
Sbjct: 61  LGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKK 120

Query: 136 EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY 195
           EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY
Sbjct: 121 EKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAY 180

Query: 196 QEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 238
           QEQLAMIL DMEEHSNHLARNIDNIIQSVRDIES+NNAFSNS
Sbjct: 181 QEQLAMILRDMEEHSNHLARNIDNIIQSVRDIESKNNAFSNS 222

BLAST of CSPI07G15160 vs. NCBI nr
Match: gi|659092825|ref|XP_008447237.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X2 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 1.7e-93
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 1

Query: 57  MEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSEN 116
           MEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSEN
Sbjct: 1   MEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSEN 60

Query: 117 RKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDA 176
           RKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDA
Sbjct: 61  RKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDA 120

Query: 177 KIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSN 236
           KIRELTAELQQERKRCAAYQEQLAMIL DMEEHSNHLARNIDNIIQSVRDIES+NNAFSN
Sbjct: 121 KIRELTAELQQERKRCAAYQEQLAMILRDMEEHSNHLARNIDNIIQSVRDIESKNNAFSN 180

Query: 237 S 238
           S
Sbjct: 181 S 181

BLAST of CSPI07G15160 vs. NCBI nr
Match: gi|595793413|ref|XP_007200455.1| (hypothetical protein PRUPE_ppa011264mg [Prunus persica])

HSP 1 Score: 312.8 bits (800), Expect = 5.3e-82
Identity = 157/208 (75.48%), Postives = 182/208 (87.50%), Query Frame = 1

Query: 31  EKDFARAVTEAEAITSN-NSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSM 90
           ++D   +    +A+TS  NSD EP+VGMEFESEE+ KVFYDAYA+ LGFIMRVDAFRRSM
Sbjct: 10  DEDVIESSNGKDAVTSEGNSDMEPYVGMEFESEEAAKVFYDAYATHLGFIMRVDAFRRSM 69

Query: 91  RDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKD 150
           RDG VVWRRLVCNKEGFRK +PKRSENRKPRA+TREGCKAM+VVKKEK+GKW+VT+FVK+
Sbjct: 70  RDGKVVWRRLVCNKEGFRKTRPKRSENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKE 129

Query: 151 HNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEH 210
           HNHPL+VTPA+ RR VLLS T DEKD KIRELTAELQ+ERKR AAYQEQL M+L +MEEH
Sbjct: 130 HNHPLVVTPANGRRTVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLDMVLREMEEH 189

Query: 211 SNHLARNIDNIIQSVRDIESENNAFSNS 238
           SNHL+RNID I+QSV++IES+  A SNS
Sbjct: 190 SNHLSRNIDGIVQSVKEIESKRVAPSNS 217

BLAST of CSPI07G15160 vs. NCBI nr
Match: gi|1009151695|ref|XP_015893687.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Ziziphus jujuba])

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81
Identity = 157/214 (73.36%), Postives = 184/214 (85.98%), Query Frame = 1

Query: 24  NVVEDPSEKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVD 83
           + ++D S K+ A A          +S+ EP+VGMEFESEE+ KVFYDAYA+ LGFIMRVD
Sbjct: 12  DAIDDSSGKEIATA--------EGSSEMEPYVGMEFESEEAAKVFYDAYATSLGFIMRVD 71

Query: 84  AFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVV 143
           AFRRSMRDG VVWRRLVCNKEGFRK +PKRSENRKPRA+TREGCKAM+VVKKEKTGKWVV
Sbjct: 72  AFRRSMRDGKVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMIVVKKEKTGKWVV 131

Query: 144 TKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMIL 203
           T+FVK+HNHPL+VTPA+ RR++LLS T DEKD KIRELTAELQ+ERKR AAYQEQL ++L
Sbjct: 132 TRFVKEHNHPLVVTPANGRRSMLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLDIVL 191

Query: 204 GDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS 238
            +MEEHS+HL+RNID+IIQSV+DIES+  A SNS
Sbjct: 192 REMEEHSSHLSRNIDDIIQSVKDIESKRLAVSNS 217

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FRS5_ARATH1.5e-2855.05Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1[more]
FRS12_ARATH7.8e-1742.45Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1[more]
FRS7_ARATH5.0e-1639.29Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1[more]
FAR1_ARATH1.2e-1231.11Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1[more]
FRS2_ARATH4.4e-1235.59Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KA59_CUCSA2.7e-11799.10Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372900 PE=4 SV=1[more]
M5VKI9_PRUPE3.7e-8275.48Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011264mg PE=4 SV=1[more]
A0A067L9X3_JATCU4.5e-8073.08Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15096 PE=4 SV=1[more]
F6I1W9_VITVI1.0e-7978.95Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0174g00120 PE=4 SV=... [more]
A5BGK2_VITVI1.0e-7978.95Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030390 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G07500.11.7e-7070.79 Far-red impaired responsive (FAR1) family protein[more]
AT2G43280.11.3e-4649.49 Far-red impaired responsive (FAR1) family protein[more]
AT3G59470.11.5e-3941.95 Far-red impaired responsive (FAR1) family protein[more]
AT4G12850.13.1e-3239.11 Far-red impaired responsive (FAR1) family protein[more]
AT4G38180.18.5e-3055.05 FAR1-related sequence 5[more]
Match NameE-valueIdentityDescription
gi|449465248|ref|XP_004150340.1|3.9e-11799.10PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis sativus][more]
gi|659092823|ref|XP_008447236.1|5.8e-11395.95PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Cucumis melo][more]
gi|659092825|ref|XP_008447237.1|1.7e-9398.90PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X2 [Cucumis melo][more]
gi|595793413|ref|XP_007200455.1|5.3e-8275.48hypothetical protein PRUPE_ppa011264mg [Prunus persica][more]
gi|1009151695|ref|XP_015893687.1|2.0e-8173.36PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004330FAR1_DNA_bnd_dom
IPR004330FAR1_DNA_bnd_dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G15160.2CSPI07G15160.2mRNA
CSPI07G15160.1CSPI07G15160.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 53..140
score: 8.3
NoneNo IPR availableunknownCoilCoilcoord: 156..183
scor
NoneNo IPR availablePANTHERPTHR31669:SF46FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEINcoord: 9..217
score: 5.2E