Cp4.1LG12g08340 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g08340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNuclear pore complex protein NUP35
LocationCp4.1LG12 : 6432495 .. 6434493 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACACCACTGTGCATAGAACTTCCAATTCTGGGAGGCAGTCGTTGTTCTACCAAGATTTAGCATCTCCTGTTTCGACGCGCAGAGGGAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTACCCCCTCCTCCGGTTTTTACATTGGAAGACCGTTCGGGCTCTGATTTTTCTCCTGAATCTGGGATTCCTGATTATCCTGTTTCACCAGAAGTTAAATCAGACCCGATGACCCCTATCCAAAGTCACGACTTCTCTTCGCCGATGAAAAGCAAGTCAAATGCCAGCACTTCACACACACCAATTAGTGGCCAACAAAGCCGGCAGGCATCAGCTGGCTTTAGTTGGTGGTCAACACCAAAAGGTGGTGGCAGCGAGCAGGAAGATAAGGGAAAAAGTTCACCAGTTGAAGGTGTGATTCAACCAGGTGCATTGATCACACTTCAAACCCCAAGGGAAGTTGCCAGACCGGAGGTGCAGAGGAATTGCTTGCCTGCAGGAAAACTCAACGAGGAGGAATGGGTTACTGTCTATGGGTGAGTTCTCTATTCCCTTTCCCCCTTTCATTCATCATTGTTAGCTGAGATCTTTGTAGTGGGTTGAATTTCAATGATTCATTTACCGCCTTTGAGTTGTAATGTGTTATTGATCACGGATTCTTTATCTGCATGCCAAACAGTCGTACATTTTTCTTTTGGGCCATCTTGGAATTTTCTAACTAACGAAGCAGATGATCAAATTGGGTTTAGTTCTACTGGATGCATCTCTCTCTTACACACTTTACTCCTGCACGTGAGAACATGTTAATGTTTTGAACATTGCTTCAATTAATAATCACTTTGACATTAAACATATTCAATTTGGAAGTGTTGTAAGCCTGTCCTTTTACATTGGCTTCTTTTTTGTTGAAATGAATATTGACAGGTAATGAAGTACCCTAGTTGTTTTATATTTACCTCAGTGGCAATGCTGCTGTAAGCAATTGCAGTTATGCTGATTTTGACATAAGCAAGATAGATTGTTAAGATTTACTATTTGATATGAGGCAATGCATCAATTGATTTCAAATGTTACTTGTATAATTTTGTGCCCTCTTTCTTCAGATTCTCACCTGCTGATACAAATCTAGTTTTGAGGGAATTTGAAAAGTGCGGTGAGATCTTGAAACACGTTCCGGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATAAGGTACCAATCTACCTCTGTTTCTCTGCTTTATTTGACTATGGTTTTCTCAGTTTGATGTTTTTTTTTATTTTTCCTTTTAGACTATTCTAGTTAATGTGTTATTTGGGAATAAACATGCAAAATGTATTCTGCTAGTAAAGATTATTATCAGGTTTTAAGATTCTCATTATTTTTTAGTTTAACAATACGGGGATGAGGATACGAACCTCGATGCCTTGACTAGTTGAGCTCTCAAGTTGGCTAATTAGGTTTAAAATTTAATTGGCAGTTGCAGAGTGTTTTGTTTGAATATTAATCTCATAAAGTCGACACATAACATTTGATGTATGTTATATTAAGCATATACGATTGAAATGATATCCATATATGAACAGGAAGATGCTATATTCAACCTCTTAGAAAAACTATTTGCCTTACGAATTTGTTGCTGGTGCAGAACCGATCTGGTGCCCACAAGGCTCTCAGCAAGAATGGCATTCAAATTAATGGGATGCTAATTGTTGGTGTGAAACCTGTGGATCCAATAGACCGGCAGACACTAGATGAAAAGTTAAACAATCCAGGATTCATGGTTCTCCCACCGGTATCTTCTCGAACCGCAGAACTCGCAACGAGAGGAGGGCCTGTGCGACCCTACAACTTCCAAAATGGTAACAGTTATGCACGGCAGTCAGGAGGTACCACCATTGCTTCACCATCCAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

mRNA sequence

ATGAACACCACTGTGCATAGAACTTCCAATTCTGGGAGGCAGTCGTTGTTCTACCAAGATTTAGCATCTCCTGTTTCGACGCGCAGAGGGAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTACCCCCTCCTCCGGTTTTTACATTGGAAGACCGTTCGGGCTCTGATTTTTCTCCTGAATCTGGGATTCCTGATTATCCTGTTTCACCAGAAGTTAAATCAGACCCGATGACCCCTATCCAAAGTCACGACTTCTCTTCGCCGATGAAAAGCAAGTCAAATGCCAGCACTTCACACACACCAATTAGTGGCCAACAAAGCCGGCAGGCATCAGCTGGCTTTAGTTGGTGGTCAACACCAAAAGGTGGTGGCAGCGAGCAGGAAGATAAGGGAAAAAGTTCACCAGTTGAAGGTGTGATTCAACCAGGTGCATTGATCACACTTCAAACCCCAAGGGAAGTTGCCAGACCGGAGGTGCAGAGGAATTGCTTGCCTGCAGGAAAACTCAACGAGGAGGAATGGGTTACTGTCTATGGATTCTCACCTGCTGATACAAATCTAGTTTTGAGGGAATTTGAAAAGTGCGGTGAGATCTTGAAACACGTTCCGGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATAAGAACCGATCTGGTGCCCACAAGGCTCTCAGCAAGAATGGCATTCAAATTAATGGGATGCTAATTGTTGGTGTGAAACCTGTGGATCCAATAGACCGGCAGACACTAGATGAAAAGTTAAACAATCCAGGATTCATGGTTCTCCCACCGGTATCTTCTCGAACCGCAGAACTCGCAACGAGAGGAGGGCCTGTGCGACCCTACAACTTCCAAAATGGTAACAGTTATGCACGGCAGTCAGGAGGTACCACCATTGCTTCACCATCCAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

Coding sequence (CDS)

ATGAACACCACTGTGCATAGAACTTCCAATTCTGGGAGGCAGTCGTTGTTCTACCAAGATTTAGCATCTCCTGTTTCGACGCGCAGAGGGAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTACCCCCTCCTCCGGTTTTTACATTGGAAGACCGTTCGGGCTCTGATTTTTCTCCTGAATCTGGGATTCCTGATTATCCTGTTTCACCAGAAGTTAAATCAGACCCGATGACCCCTATCCAAAGTCACGACTTCTCTTCGCCGATGAAAAGCAAGTCAAATGCCAGCACTTCACACACACCAATTAGTGGCCAACAAAGCCGGCAGGCATCAGCTGGCTTTAGTTGGTGGTCAACACCAAAAGGTGGTGGCAGCGAGCAGGAAGATAAGGGAAAAAGTTCACCAGTTGAAGGTGTGATTCAACCAGGTGCATTGATCACACTTCAAACCCCAAGGGAAGTTGCCAGACCGGAGGTGCAGAGGAATTGCTTGCCTGCAGGAAAACTCAACGAGGAGGAATGGGTTACTGTCTATGGATTCTCACCTGCTGATACAAATCTAGTTTTGAGGGAATTTGAAAAGTGCGGTGAGATCTTGAAACACGTTCCGGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATAAGAACCGATCTGGTGCCCACAAGGCTCTCAGCAAGAATGGCATTCAAATTAATGGGATGCTAATTGTTGGTGTGAAACCTGTGGATCCAATAGACCGGCAGACACTAGATGAAAAGTTAAACAATCCAGGATTCATGGTTCTCCCACCGGTATCTTCTCGAACCGCAGAACTCGCAACGAGAGGAGGGCCTGTGCGACCCTACAACTTCCAAAATGGTAACAGTTATGCACGGCAGTCAGGAGGTACCACCATTGCTTCACCATCCAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

Protein sequence

MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISGQQSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQNGNSYARQSGGTTIASPSKSLVSKVMDLMFGV
Homology
[Close]
BLAST of Cp4.1LG12g08340 vs. Swiss-Prot
Match: NUP35_ARATH (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana GN=NUP35 PE=1 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.4e-119
Identity = 223/334 (66.77%), Postives = 257/334 (76.95%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+   HRT  SGRQSL +QDLASPVS RRGKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSH--DFSSPMKSKSNASTSHTPISGQ 120
           TL+DRS  DFSPESGI DY  SP+ KSD  TP QS   +  +P K K  AS S + ++ Q
Sbjct: 61  TLDDRS--DFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQ 120

Query: 121 QSRQASAGFSWWSTPKGGGS-EQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCL 180
           QS+Q S   SWWS  K G S EQ+DKGK SPVEGV+QPGAL+TL  PREVARPEVQR  +
Sbjct: 121 QSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQII 180

Query: 181 PAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKA 240
           P G L+EEEWVTVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILY+NRS AHKA
Sbjct: 181 PTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKA 240

Query: 241 LSKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYN 300
           L+K G+ ING++IVGVKPVDPI +Q L+E+LNN GFM LPP SS      T     RP  
Sbjct: 241 LNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTR---NTARPLSRPQY 300

Query: 301 FQNGNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
            QNG++++ Q  G  +ASPSKS+VSK  DLMFGV
Sbjct: 301 LQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]
BLAST of Cp4.1LG12g08340 vs. Swiss-Prot
Match: NUP53_XENTR (Nucleoporin NUP53 OS=Xenopus tropicalis GN=nup35 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.3e-17
Identity = 92/314 (29.30%), Postives = 144/314 (45.86%), Query Frame = 1 

Query: 34  TPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPESGIPDYPVSPEVKSDPMT 93
           TP Q  ++  +  R    +   PP PV  T +D+SG+   P   I D   SP + S P+ 
Sbjct: 44  TPQQRPSIGVMEMRSPLLSGGSPPQPVVPTHKDKSGAP--PVRSIYDDIASPGLGSTPLN 103

Query: 94  PIQSHDFS---SPMKSKSNASTSHTPISGQQSRQASAGFSWWSTPKGGGSEQEDKGKSSP 153
           P ++  FS   +P+     +S     ISG + R AS+ FS    P   G  ++       
Sbjct: 104 PRKTASFSVLHTPLSGVIPSSPECKNISGSRKRPASSVFS----PATIGHSRK------- 163

Query: 154 VEGVIQPGALITLQTPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKC 213
                      T  +P ++     Q + L +    ++ WVTV+GF  A  + +L +F + 
Sbjct: 164 -----------TTLSPAQMDPFYTQGDALTSDDQLDDTWVTVFGFPQASASYILLQFAQY 223

Query: 214 GEILKHVPGPRDANWMHILYKNRSGAHKALSKNGIQINGMLIVGVKPVDPIDRQTLD--E 273
           G I+KHV    + NWMHI Y+++  A KALSK+G      +++GVKP   ID+  ++  E
Sbjct: 224 GNIIKHVMS-NNGNWMHIQYQSKLQARKALSKDGRIFGESIMIGVKPC--IDKSVMEATE 283

Query: 274 KLNNP--GFMVLPPV---SSRTAELAT-RGGPVRP----YNFQNGNSYARQSGGTTIASP 331
           K++ P    +  PPV    + T  + T R   +RP    Y       Y +          
Sbjct: 284 KVSTPTVSSVFTPPVKNIGTPTQSVGTPRAASMRPLAATYKTPASADY-QVVADKQAPRK 329

[Close]
BLAST of Cp4.1LG12g08340 vs. Swiss-Prot
Match: NUP53_HUMAN (Nucleoporin NUP53 OS=Homo sapiens GN=NUP35 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 91/328 (27.74%), Postives = 135/328 (41.16%), Query Frame = 1 

Query: 20  DLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDY 79
           DL +PV+ +    S P  +  V  +          P P V   +D+SG+   P   I D 
Sbjct: 42  DLPAPVTPQPRSISGP--SVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAP--PVRSIYDD 101

Query: 80  PVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISGQQSRQASAGFSWWSTPKGGGSE 139
             SP + S P+T           + + N S   +P+ G  S           TP  G S 
Sbjct: 102 ISSPGLGSTPLTS----------RRQPNISVMQSPLVGVTS-----------TPGTGQSM 161

Query: 140 QEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTN 199
                   P +  + P  L    T         Q + L +    ++ WVTV+GF  A  +
Sbjct: 162 FSPASIGQPRKTTLSPAQLDPFYT---------QGDSLTSEDHLDDSWVTVFGFPQASAS 221

Query: 200 LVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSKNGIQINGMLIVGVKPVDPI 259
            +L +F + G ILKHV      NWMHI Y+++  A KALSK+G      +++GVKP   I
Sbjct: 222 YILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPC--I 281

Query: 260 DRQTLDEK----LNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN-------GNSYARQS 319
           D+  ++      L++P     PP+        T G P +P +            +Y   +
Sbjct: 282 DKSVMESSDRCALSSPSLAFTPPIK-------TLGTPTQPGSTPRISTMRPLATAYKAST 325

Query: 320 GGTTIAS----PSK--SLVSKVMDLMFG 331
               + S    P K  SLVSK M+ MFG
Sbjct: 342 SDYQVISDRQTPKKDESLVSKAMEYMFG 325

[Close]
BLAST of Cp4.1LG12g08340 vs. Swiss-Prot
Match: NUP53_RAT (Nucleoporin NUP53 OS=Rattus norvegicus GN=Nup35 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 89/323 (27.55%), Postives = 136/323 (42.11%), Query Frame = 1 

Query: 20  DLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDY 79
           DL +PV+ +    S P  +  V  +          P P V   +D+SG+   P   I D 
Sbjct: 42  DLPAPVTPQPRSISGP--SVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAP--PVRSIYDD 101

Query: 80  PVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISGQQSRQASAGFSWWSTPKGGGSE 139
             SP + S P+          P + ++N S   +P+ G             +TP  G S 
Sbjct: 102 ISSPGLGSTPL----------PSRRQANISVLQSPLVGV------------TTPVTGQSM 161

Query: 140 QEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTN 199
                   P +  + P  L    T         Q + L +    ++ WVTV+GF  A  +
Sbjct: 162 FSPANIGQPRKTTLSPAQLDPFYT---------QGDSLTSEDHLDDTWVTVFGFPQASAS 221

Query: 200 LVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSKNGIQINGMLIVGVKPVDPI 259
            +L +F + G ILKHV      NWMHI Y+++  A KALSK+G      +++GVKP   I
Sbjct: 222 YILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPC--I 281

Query: 260 DRQTLDEK----LNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN--GNSYARQSGGTTI 319
           D+  ++      L++P     PP+  RT    T+ G     +       +Y   +    +
Sbjct: 282 DKNVMENSDRGVLSSPSLAFTPPI--RTLGTPTQPGSTPRVSTMRPLATAYKASTSDYQV 324

Query: 320 AS----PSK--SLVSKVMDLMFG 331
            S    P K  SLVS+ M+ MFG
Sbjct: 342 ISDRQTPKKDESLVSRAMEYMFG 324

[Close]
BLAST of Cp4.1LG12g08340 vs. Swiss-Prot
Match: NUP53_MOUSE (Nucleoporin NUP53 OS=Mus musculus GN=Nup35 PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 7.7e-15
Identity = 88/323 (27.24%), Postives = 135/323 (41.80%), Query Frame = 1 

Query: 20  DLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDY 79
           DL +PV+ +    S P  +  V  +          P P V   +D+SG+   P   I D 
Sbjct: 42  DLPAPVTPQPRSISGP--SVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAP--PVRSIYDD 101

Query: 80  PVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISGQQSRQASAGFSWWSTPKGGGSE 139
             SP + S P+T           + ++N S   +P+ G             +TP  G S 
Sbjct: 102 ISSPGLGSTPLTS----------RRQANISLLQSPLVGA------------TTPVPGQSM 161

Query: 140 QEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAGKLNEEEWVTVYGFSPADTN 199
                   P +  + P  L    T         Q + L +    ++ WVTV+GF  A  +
Sbjct: 162 FSPANIGQPRKTTLSPAQLDPFYT---------QGDSLTSEDHLDDTWVTVFGFPQASAS 221

Query: 200 LVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSKNGIQINGMLIVGVKPVDPI 259
            +L +F + G ILKHV      NWMHI Y+++  A KALSK+G      +++GVKP   I
Sbjct: 222 YILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPC--I 281

Query: 260 DRQTLDEK----LNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN--GNSYARQSGGTTI 319
           D+  ++      L++P      P+  RT    T+ G     +       +Y   +    +
Sbjct: 282 DKNVMENSDRGVLSSPSLAFTTPI--RTLGTPTQSGSTPRVSTMRPLATAYKASTSDYQV 324

Query: 320 AS----PSK--SLVSKVMDLMFG 331
            S    P K  SLVS+ M+ MFG
Sbjct: 342 ISDRQTPKKDESLVSRAMEYMFG 324

[Close]
BLAST of Cp4.1LG12g08340 vs. TrEMBL
Match: A0A0A0K7B2_CUCSA (Nuclear pore complex protein NUP35 OS=Cucumis sativus GN=Csa_7G452990 PE=3 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 2.2e-162
Identity = 288/331 (87.01%), Postives = 305/331 (92.15%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRT NSG +SLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISGQQS 120
           TLEDRS SDFSPESGIPDYPVSPE KSDP TPI+ HDFSSP K+KSNASTS+TPISGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAG 180
           RQ SAGFSWWST KGGGSEQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILY+NRS A KAL+K
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN 300
           NGIQING+LIVGVKPVDP+ RQ L+E+LNNPGFMV+PPVSSRT+EL    GP+RPYN QN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
           G + AR SGG  IASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGG-AIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of Cp4.1LG12g08340 vs. TrEMBL
Match: W9RV02_9ROSA (Nuclear pore complex protein NUP35 OS=Morus notabilis GN=L484_026260 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 2.1e-136
Identity = 251/334 (75.15%), Postives = 282/334 (84.43%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+TTVHRT  SGRQSLF+QDLASP+S RRGKFSTPGQAAAVSALWRENF  SDLPPPPVF
Sbjct: 1   MSTTVHRTPKSGRQSLFFQDLASPISARRGKFSTPGQAAAVSALWRENFSGSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQS--HDFSSPMKSKSNASTSHTPISGQ 120
           TLEDRS  DFSPESGIPDYPVSPE +SDP +P+QS   DF +P+KSKS ASTS   +S Q
Sbjct: 61  TLEDRS--DFSPESGIPDYPVSPEARSDPRSPVQSSGRDFLTPVKSKSEASTSSAMMSAQ 120

Query: 121 QSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLP 180
           Q++Q S+GF+WWS P    SEQ++KG SSPVEGV+QPGALITL  PREVARPE+QRN LP
Sbjct: 121 QNQQGSSGFNWWS-PSKSSSEQDEKGNSSPVEGVVQPGALITLPPPREVARPEMQRNALP 180

Query: 181 AGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKAL 240
            G LNEEEWVTVYGFSPADTNLVLREFEKCG ILKHVPGPR+ANWMHILY+NRS   KAL
Sbjct: 181 TGNLNEEEWVTVYGFSPADTNLVLREFEKCGVILKHVPGPREANWMHILYQNRSDVLKAL 240

Query: 241 SKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVL-PPVSSRTAELATRGGPVRPYN 300
           SKNG+QING+LIVGVKP+DP+ RQ L+++LNN GFM L PP S++T EL   GGP RPY 
Sbjct: 241 SKNGMQINGILIVGVKPLDPMQRQALNDRLNNQGFMTLPPPPSAKTGELNAVGGPSRPYY 300

Query: 301 FQNGNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
            QNGN+  RQSGG  IASP+KSL SK+MDLMFGV
Sbjct: 301 LQNGNANVRQSGG-AIASPTKSLASKIMDLMFGV 330

[Close]
BLAST of Cp4.1LG12g08340 vs. TrEMBL
Match: A0A0D2RHJ5_GOSRA (Nuclear pore complex protein NUP35 OS=Gossypium raimondii GN=B456_003G063100 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.0e-134
Identity = 242/332 (72.89%), Postives = 279/332 (84.04%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+T VHRT  SGRQSLFYQDLASP+S RRGKFS+PGQAAAVSALW+ENFG SDLPPPP++
Sbjct: 1   MSTVVHRTPKSGRQSLFYQDLASPISARRGKFSSPGQAAAVSALWQENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQS--HDFSSPMKSKSNASTSHTPISGQ 120
           TLEDRS  DFSPESGI DYP+SPE+KSDP +P+QS  HDFS+P KSKS ASTS   ++GQ
Sbjct: 61  TLEDRS--DFSPESGILDYPMSPEIKSDPKSPVQSSGHDFSTPAKSKSGASTSFAILNGQ 120

Query: 121 QSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLP 180
           Q++Q+ A  SWWS  K   +EQ+DKGK SPVEGV+QPGALITL  PREVARPE+QRN +P
Sbjct: 121 QNQQSPASLSWWSPAKNSSNEQDDKGKGSPVEGVVQPGALITLPPPREVARPEIQRNSVP 180

Query: 181 AGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKAL 240
           AG L+EEEWVTVYGFSPADTNLVLREFEKCG ILKHVPGPRDANWMHILY NRS A +AL
Sbjct: 181 AGNLDEEEWVTVYGFSPADTNLVLREFEKCGVILKHVPGPRDANWMHILYLNRSDAQRAL 240

Query: 241 SKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNF 300
           SKNG+QING LI+GVKPVDP+ R+ L+E++NN GFM LPP SSRT EL +   P RPY  
Sbjct: 241 SKNGMQINGALIIGVKPVDPMQREALNERINNQGFMTLPPPSSRTPEL-SNFRPSRPYYL 300

Query: 301 QNGNSYARQSGGTTIASPSKSLVSKVMDLMFG 331
           QNGN+ ARQSG   IA+P+KSL +K+M+ MFG
Sbjct: 301 QNGNTNARQSGSAAIANPTKSLGTKIMEYMFG 329

[Close]
BLAST of Cp4.1LG12g08340 vs. TrEMBL
Match: A0A061GBV6_THECC (Nuclear pore complex protein NUP35 OS=Theobroma cacao GN=TCM_028859 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 5.8e-134
Identity = 245/332 (73.80%), Postives = 279/332 (84.04%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+TTVHRT  SGRQSLF+QDLASPVS RRGKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSTTVHRTPKSGRQSLFFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQS--HDFSSPMKSKSNASTSHTPISGQ 120
           TLEDRS  DFSPESGI DYP+SPE+KSDP  P+Q+   DFS+P KSKS ASTS + +SGQ
Sbjct: 61  TLEDRS--DFSPESGILDYPMSPEIKSDPRNPVQTSGRDFSTPAKSKSEASTSFSVLSGQ 120

Query: 121 QSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLP 180
           Q++Q+    SWWS  K  GSEQ+DKGK SPVEGV+QPGALITL  PREVARPE+QRN +P
Sbjct: 121 QNQQSPTSLSWWSPTKASGSEQDDKGKGSPVEGVVQPGALITLPPPREVARPEIQRNSIP 180

Query: 181 AGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKAL 240
           AG L+EEEWVTVYGFSPADTNLVLREFEKCG ILKHVPGPRDANWMHILY+NRS A +AL
Sbjct: 181 AGNLDEEEWVTVYGFSPADTNLVLREFEKCGVILKHVPGPRDANWMHILYQNRSDAQRAL 240

Query: 241 SKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNF 300
            KNG+QING+LIVGVKPVDP+ RQ LDE+LNN GFM LPP +SR++EL     P  PY  
Sbjct: 241 GKNGMQINGVLIVGVKPVDPMQRQALDERLNNQGFMTLPPPASRSSEL-NNFRPSHPYYL 300

Query: 301 QNGNSYARQSGGTTIASPSKSLVSKVMDLMFG 331
           QNGN+ ARQSGG  IA+P+KSL  KVM+ +FG
Sbjct: 301 QNGNTNARQSGG-AIANPTKSLGLKVMEFLFG 328

[Close]
BLAST of Cp4.1LG12g08340 vs. TrEMBL
Match: A0A0B0P8S8_GOSAR (Nuclear pore complex protein NUP35 OS=Gossypium arboreum GN=F383_09101 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 7.5e-134
Identity = 241/332 (72.59%), Postives = 280/332 (84.34%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+T VHRT  SGRQSLFYQDLASP+S RRGKFS+PGQAAAVSALW+ENFG SDLPPPP++
Sbjct: 1   MSTVVHRTPKSGRQSLFYQDLASPISARRGKFSSPGQAAAVSALWQENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQS--HDFSSPMKSKSNASTSHTPISGQ 120
           TLEDRS  DFSPESGI DYP+SPE+KSDP +P+QS   DFS+P KSKS ASTS   ++GQ
Sbjct: 61  TLEDRS--DFSPESGILDYPMSPEIKSDPKSPVQSSGRDFSTPAKSKSGASTSFAILNGQ 120

Query: 121 QSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLP 180
           Q++Q+SA  SWWS  K   +EQ+DKGK SPVEGV+QPGALITL  PREVARPE+QRN +P
Sbjct: 121 QNQQSSASLSWWSPAKNSSNEQDDKGKGSPVEGVVQPGALITLPPPREVARPEIQRNSVP 180

Query: 181 AGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKAL 240
           AG L+EEEWVTVYGFSPADTNLVLREFEKCG ILKHVPGPRDANWMHILY NRS A +AL
Sbjct: 181 AGNLDEEEWVTVYGFSPADTNLVLREFEKCGVILKHVPGPRDANWMHILYLNRSDAQRAL 240

Query: 241 SKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNF 300
           SKNG+QING LI+GVKPVDP+ R+ L+E++NN GFM LPP SSRT+EL +   P RP+  
Sbjct: 241 SKNGMQINGALIIGVKPVDPMQREALNERMNNQGFMTLPPPSSRTSEL-SNFRPSRPFYL 300

Query: 301 QNGNSYARQSGGTTIASPSKSLVSKVMDLMFG 331
           QNGN+ ARQSG   IA+P+KSL +K+M+ MFG
Sbjct: 301 QNGNTNARQSGSAAIANPTKSLGTKIMEYMFG 329

[Close]
BLAST of Cp4.1LG12g08340 vs. TAIR10
Match: AT3G16310.1 (AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein)

HSP 1 Score: 429.1 bits (1102), Expect = 2.5e-120
Identity = 223/334 (66.77%), Postives = 257/334 (76.95%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+   HRT  SGRQSL +QDLASPVS RRGKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSH--DFSSPMKSKSNASTSHTPISGQ 120
           TL+DRS  DFSPESGI DY  SP+ KSD  TP QS   +  +P K K  AS S + ++ Q
Sbjct: 61  TLDDRS--DFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQ 120

Query: 121 QSRQASAGFSWWSTPKGGGS-EQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCL 180
           QS+Q S   SWWS  K G S EQ+DKGK SPVEGV+QPGAL+TL  PREVARPEVQR  +
Sbjct: 121 QSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQII 180

Query: 181 PAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKA 240
           P G L+EEEWVTVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILY+NRS AHKA
Sbjct: 181 PTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKA 240

Query: 241 LSKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYN 300
           L+K G+ ING++IVGVKPVDPI +Q L+E+LNN GFM LPP SS      T     RP  
Sbjct: 241 LNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTR---NTARPLSRPQY 300

Query: 301 FQNGNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
            QNG++++ Q  G  +ASPSKS+VSK  DLMFGV
Sbjct: 301 LQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]
BLAST of Cp4.1LG12g08340 vs. NCBI nr
Match: gi|449447801|ref|XP_004141656.1| (PREDICTED: nuclear pore complex protein NUP35 [Cucumis sativus])

HSP 1 Score: 579.7 bits (1493), Expect = 3.2e-162
Identity = 288/331 (87.01%), Postives = 305/331 (92.15%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRT NSG +SLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISGQQS 120
           TLEDRS SDFSPESGIPDYPVSPE KSDP TPI+ HDFSSP K+KSNASTS+TPISGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAG 180
           RQ SAGFSWWST KGGGSEQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILY+NRS A KAL+K
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN 300
           NGIQING+LIVGVKPVDP+ RQ L+E+LNNPGFMV+PPVSSRT+EL    GP+RPYN QN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
           G + AR SGG  IASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGG-AIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of Cp4.1LG12g08340 vs. NCBI nr
Match: gi|659124973|ref|XP_008462444.1| (PREDICTED: nucleoporin NUP53 [Cucumis melo])

HSP 1 Score: 574.7 bits (1480), Expect = 1.0e-160
Identity = 285/331 (86.10%), Postives = 304/331 (91.84%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTVHRT NSG +SLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISGQQS 120
           TLEDRS SDFSPESGIPDYPVSPE KSDP TPI+ HDFSSP K+KSNASTS+TPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAG 180
           RQ SAGFSWWST KGGGSE+EDKGKSSPVEGVIQPGALITL TPREVARPEV+RNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILY+NRS A KAL+K
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN 300
           NGIQING+LIVGVKPVDP+ RQ LDEKLNNPGFMV+PPVSSRT+EL    GP+ PY+ QN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN 300

Query: 301 GNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
           GN+ AR SGG  IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGG-AIASPSKSLVSKVMDLMFGV 330

[Close]
BLAST of Cp4.1LG12g08340 vs. NCBI nr
Match: gi|703104926|ref|XP_010098126.1| (hypothetical protein L484_026260 [Morus notabilis])

HSP 1 Score: 493.4 bits (1269), Expect = 3.0e-136
Identity = 251/334 (75.15%), Postives = 282/334 (84.43%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+TTVHRT  SGRQSLF+QDLASP+S RRGKFSTPGQAAAVSALWRENF  SDLPPPPVF
Sbjct: 1   MSTTVHRTPKSGRQSLFFQDLASPISARRGKFSTPGQAAAVSALWRENFSGSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQS--HDFSSPMKSKSNASTSHTPISGQ 120
           TLEDRS  DFSPESGIPDYPVSPE +SDP +P+QS   DF +P+KSKS ASTS   +S Q
Sbjct: 61  TLEDRS--DFSPESGIPDYPVSPEARSDPRSPVQSSGRDFLTPVKSKSEASTSSAMMSAQ 120

Query: 121 QSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLP 180
           Q++Q S+GF+WWS P    SEQ++KG SSPVEGV+QPGALITL  PREVARPE+QRN LP
Sbjct: 121 QNQQGSSGFNWWS-PSKSSSEQDEKGNSSPVEGVVQPGALITLPPPREVARPEMQRNALP 180

Query: 181 AGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKAL 240
            G LNEEEWVTVYGFSPADTNLVLREFEKCG ILKHVPGPR+ANWMHILY+NRS   KAL
Sbjct: 181 TGNLNEEEWVTVYGFSPADTNLVLREFEKCGVILKHVPGPREANWMHILYQNRSDVLKAL 240

Query: 241 SKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVL-PPVSSRTAELATRGGPVRPYN 300
           SKNG+QING+LIVGVKP+DP+ RQ L+++LNN GFM L PP S++T EL   GGP RPY 
Sbjct: 241 SKNGMQINGILIVGVKPLDPMQRQALNDRLNNQGFMTLPPPPSAKTGELNAVGGPSRPYY 300

Query: 301 FQNGNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
            QNGN+  RQSGG  IASP+KSL SK+MDLMFGV
Sbjct: 301 LQNGNANVRQSGG-AIASPTKSLASKIMDLMFGV 330

[Close]
BLAST of Cp4.1LG12g08340 vs. NCBI nr
Match: gi|823140637|ref|XP_012470168.1| (PREDICTED: nuclear pore complex protein NUP35-like [Gossypium raimondii])

HSP 1 Score: 486.9 bits (1252), Expect = 2.8e-134
Identity = 242/332 (72.89%), Postives = 279/332 (84.04%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+T VHRT  SGRQSLFYQDLASP+S RRGKFS+PGQAAAVSALW+ENFG SDLPPPP++
Sbjct: 1   MSTVVHRTPKSGRQSLFYQDLASPISARRGKFSSPGQAAAVSALWQENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQS--HDFSSPMKSKSNASTSHTPISGQ 120
           TLEDRS  DFSPESGI DYP+SPE+KSDP +P+QS  HDFS+P KSKS ASTS   ++GQ
Sbjct: 61  TLEDRS--DFSPESGILDYPMSPEIKSDPKSPVQSSGHDFSTPAKSKSGASTSFAILNGQ 120

Query: 121 QSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLP 180
           Q++Q+ A  SWWS  K   +EQ+DKGK SPVEGV+QPGALITL  PREVARPE+QRN +P
Sbjct: 121 QNQQSPASLSWWSPAKNSSNEQDDKGKGSPVEGVVQPGALITLPPPREVARPEIQRNSVP 180

Query: 181 AGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKAL 240
           AG L+EEEWVTVYGFSPADTNLVLREFEKCG ILKHVPGPRDANWMHILY NRS A +AL
Sbjct: 181 AGNLDEEEWVTVYGFSPADTNLVLREFEKCGVILKHVPGPRDANWMHILYLNRSDAQRAL 240

Query: 241 SKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNF 300
           SKNG+QING LI+GVKPVDP+ R+ L+E++NN GFM LPP SSRT EL +   P RPY  
Sbjct: 241 SKNGMQINGALIIGVKPVDPMQREALNERINNQGFMTLPPPSSRTPEL-SNFRPSRPYYL 300

Query: 301 QNGNSYARQSGGTTIASPSKSLVSKVMDLMFG 331
           QNGN+ ARQSG   IA+P+KSL +K+M+ MFG
Sbjct: 301 QNGNTNARQSGSAAIANPTKSLGTKIMEYMFG 329

[Close]
BLAST of Cp4.1LG12g08340 vs. NCBI nr
Match: gi|1009153320|ref|XP_015894574.1| (PREDICTED: nuclear pore complex protein NUP35 [Ziziphus jujuba])

HSP 1 Score: 486.5 bits (1251), Expect = 3.7e-134
Identity = 247/334 (73.95%), Postives = 281/334 (84.13%), Query Frame = 1 

Query: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+TTVHRT  SGRQSLF+QDLA+PVS RRGKFS PGQAAAVSALWRENFG SDLPPPPV+
Sbjct: 1   MSTTVHRTPKSGRQSLFFQDLATPVSARRGKFSNPGQAAAVSALWRENFGGSDLPPPPVY 60

Query: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQS--HDFSSPMKSKSNASTSHTPISGQ 120
           TLEDR+  DFSPESGIPDYPVSPE KSDP TP++S   DFS+P+KSKS+ASTSH  +SGQ
Sbjct: 61  TLEDRA--DFSPESGIPDYPVSPEAKSDPRTPVRSASRDFSTPLKSKSDASTSHAMMSGQ 120

Query: 121 QSRQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLP 180
           Q +Q+ A F+WWS P   G++Q++KGK +PVEGV+QPGALITL  PREVARPEV RN LP
Sbjct: 121 QMQQSPASFNWWS-PSKSGTDQDEKGKGAPVEGVVQPGALITLPPPREVARPEVPRNTLP 180

Query: 181 AGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKAL 240
           AG LNEEEWVTVYGFSPADTN+VLREFEKCG ILKHVPGPRDANWMHILY+NRS A KAL
Sbjct: 181 AGNLNEEEWVTVYGFSPADTNIVLREFEKCGMILKHVPGPRDANWMHILYQNRSDAQKAL 240

Query: 241 SKNGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSS-RTAELATRGGPVRPYN 300
           SKNG+QING+LIVGVKP+DP+ RQ L+++LNN GFM LPP SS + AE         P+ 
Sbjct: 241 SKNGMQINGILIVGVKPLDPMQRQALNDRLNNQGFMTLPPPSSAKNAEFNALRASSHPHY 300

Query: 301 FQNGNSYARQSGGTTIASPSKSLVSKVMDLMFGV 332
            QNGN   RQSGG  IASP+KSLVSK++DLMFGV
Sbjct: 301 LQNGNPTVRQSGG-AIASPTKSLVSKIVDLMFGV 330

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g08340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NUP35_ARATH4.4e-11966.77Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana GN=NUP35 PE=1 SV=1[more]
NUP53_XENTR8.3e-1729.30Nucleoporin NUP53 OS=Xenopus tropicalis GN=nup35 PE=2 SV=1[more]
NUP53_HUMAN7.0e-1627.74Nucleoporin NUP53 OS=Homo sapiens GN=NUP35 PE=1 SV=1[more]
NUP53_RAT7.0e-1627.55Nucleoporin NUP53 OS=Rattus norvegicus GN=Nup35 PE=1 SV=1[more]
NUP53_MOUSE7.7e-1527.24Nucleoporin NUP53 OS=Mus musculus GN=Nup35 PE=1 SV=2[more]
BLAST of Cp4.1LG12g08340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7B2_CUCSA2.2e-16287.01Nuclear pore complex protein NUP35 OS=Cucumis sativus GN=Csa_7G452990 PE=3 SV=1[more]
W9RV02_9ROSA2.1e-13675.15Nuclear pore complex protein NUP35 OS=Morus notabilis GN=L484_026260 PE=3 SV=1[more]
A0A0D2RHJ5_GOSRA2.0e-13472.89Nuclear pore complex protein NUP35 OS=Gossypium raimondii GN=B456_003G063100 PE=... [more]
A0A061GBV6_THECC5.8e-13473.80Nuclear pore complex protein NUP35 OS=Theobroma cacao GN=TCM_028859 PE=3 SV=1[more]
A0A0B0P8S8_GOSAR7.5e-13472.59Nuclear pore complex protein NUP35 OS=Gossypium arboreum GN=F383_09101 PE=3 SV=1[more]
BLAST of Cp4.1LG12g08340 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16310.12.5e-12066.77 mitotic phosphoprotein N' end (MPPN) family protein[more]
BLAST of Cp4.1LG12g08340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447801|ref|XP_004141656.1|3.2e-16287.01PREDICTED: nuclear pore complex protein NUP35 [Cucumis sativus][more]
gi|659124973|ref|XP_008462444.1|1.0e-16086.10PREDICTED: nucleoporin NUP53 [Cucumis melo][more]
gi|703104926|ref|XP_010098126.1|3.0e-13675.15hypothetical protein L484_026260 [Morus notabilis][more]
gi|823140637|ref|XP_012470168.1|2.8e-13472.89PREDICTED: nuclear pore complex protein NUP35-like [Gossypium raimondii][more]
gi|1009153320|ref|XP_015894574.1|3.7e-13473.95PREDICTED: nuclear pore complex protein NUP35 [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051028 mRNA transport
biological_process GO:0015031 protein transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0006913 nucleocytoplasmic transport
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0005643 nuclear pore
molecular_function GO:0003674 molecular_function
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g08340.1Cp4.1LG12g08340.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g08340Cucsa.361160Cucumber (Gy14) v1cgycpeB0935
Cp4.1LG12g08340CmaCh17G007810Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g08340CmoCh17G007480Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g08340Cla000889Watermelon (97103) v1cpewmB130
Cp4.1LG12g08340Csa7G452990Cucumber (Chinese Long) v2cpecuB156
Cp4.1LG12g08340MELO3C024450Melon (DHL92) v3.5.1cpemeB117
Cp4.1LG12g08340ClCG09G000060Watermelon (Charleston Gray)cpewcgB128
Cp4.1LG12g08340CSPI07G23430Wild cucumber (PI 183967)cpecpiB158
Cp4.1LG12g08340Lsi02G030020Bottle gourd (USVL1VR-Ls)cpelsiB110
Cp4.1LG12g08340MELO3C024450.2Melon (DHL92) v3.6.1cpemedB144
Cp4.1LG12g08340CsaV3_7G035410Cucumber (Chinese Long) v3cpecucB0181
Cp4.1LG12g08340Bhi09G000362Wax gourdcpewgoB0211
Cp4.1LG12g08340CsGy7G021690Cucumber (Gy14) v2cgybcpeB899
Cp4.1LG12g08340Carg09503Silver-seed gourdcarcpeB1424
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g08340Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g08340Cucurbita pepo (Zucchini)cpecpeB178
Cp4.1LG12g08340Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g08340Cucurbita pepo (Zucchini)cpecpeB182
Cp4.1LG12g08340Cucurbita pepo (Zucchini)cpecpeB187
Cp4.1LG12g08340Cucurbita maxima (Rimu)cmacpeB257
Cp4.1LG12g08340Cucurbita maxima (Rimu)cmacpeB466
Cp4.1LG12g08340Cucurbita maxima (Rimu)cmacpeB903
Cp4.1LG12g08340Cucurbita moschata (Rifu)cmocpeB221
Cp4.1LG12g08340Cucurbita moschata (Rifu)cmocpeB426
Cp4.1LG12g08340Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g08340Bottle gourd (USVL1VR-Ls)cpelsiB127
Cp4.1LG12g08340Watermelon (Charleston Gray)cpewcgB148
Cp4.1LG12g08340Watermelon (97103) v1cpewmB145
Cp4.1LG12g08340Melon (DHL92) v3.5.1cpemeB132
Cp4.1LG12g08340Cucumber (Gy14) v2cgybcpeB306
Cp4.1LG12g08340Melon (DHL92) v3.6.1cpemedB159
Cp4.1LG12g08340Silver-seed gourdcarcpeB0171
Cp4.1LG12g08340Silver-seed gourdcarcpeB0280
Cp4.1LG12g08340Silver-seed gourdcarcpeB1049
Cp4.1LG12g08340Cucumber (Chinese Long) v3cpecucB0156
Cp4.1LG12g08340Wax gourdcpewgoB0190