Cp4.1LG12g04730 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g04730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	E3 ubiquitin-protein ligase
Location	Cp4.1LG12 : 4513988 .. 4517422 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGGGAATGAAATAATAAAAAGTGAGAAGGAGAGGAAGAGGTGAGAAAGAAGGAAGGGAAGTTGGGTTGATTTATAATAACCCCAATCCATATCCACATCGACCCATCAGAAAAATGGGAATGAAAAAGAAAAGGAAAAGCTTCCATTATTAACTAATCTCTCCTTCTAAATCCCACCTTAATTCTTCCTTCTCCCTGTTTCTGTAATCTCAGCCACCCAATTCATCTCTCTGTTCAACCATTTTCAATCCTCTCTTCTTCCTTCACTCTTCCCATTCTCCCATTTTCCCAATTCCCTTCTAAAATTTTCCCCCAATTCGGCCATATTAATGGCGGAAACCTCTTCCCCATCAAAACCCATCAACCCATTTTGATTCTCCTTCGGTTCTTGTTCCGGATTTCATTGTTTTTCTTTGTTGTTGTGCCAAAATGGAGCTGGATGGCATCGAGGGCGTGCCATCCATGGATGTGATGGACGAGGAGGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCCATTTCCAAGCCTCGGATCAACAATAACGACAATCCCACCACCACAAGTGTTCACGAGCTTCTCGAATGTCCCGTTTGCACCAATTCTATGTATCCCCCAATTCATCAGGTTCCTTCCATGCCCCCCTTTTCCCCCTTTTCTTGCATCACTTGTTTCTGATCTGTTTGATTCATTCTGAAATTTTGGGTTTGTTGGTTTACATTCTTAACATTGATCTTCTGTTCAATGGGGCCATTCCTTTTGTCGATCCATCGGTTCTTGTAATGTTTTCTTTATGTTTTTTCTCTTGTTATTGTTATTCTTTTGCCTTTCGTTTGTCAGTCTGCAATGTGTCAAAATTGTTACCTAAGGCCCTGCGGTTCCATAAACTCATAACCAAAAATGAAAAGCCATTATGTTGTTATCATTTGTTGTTCTTTAGTCAACTCCGTTCACAAACTGAAATCAATTGTGCCCTTTTTGGGGTTTGTTTAATGAGTACAAGGAGGAGGAATACACAAACTCTATCTCATATTATAGGCTAAATATCATCAATTGGGGAAGTGGGAATCCTCACAACTATCCTGGCTGCAGGATCGGCCTTGCATTTGACAGGAATTTACTTCATTTTTATGTTCCTACCCCGTTCATAGGCACTTTGTAATAGCTCAAGCCCACCGCTTTCAGGTATTGCCCTCTTTGGGCTTTTCCTCAAGGTTCTTCAAAACATGCCGGTTAGGGAGAGGTCTTATAAAGGGTATTTCGTTCTCCTAGCCAACCAATGTGGCTAAAATTATGAATACTGAGATCATCTGTTTCTCTATTTCATATGAGATTGAATATTGTGAAGGGTTTTTGTTAGTAGTAATCCAATGGTCAGAGCATCTCTTTTGCTGACAACAGACTGTTTCTTAAGTGAGTTTTAAAGGCTGAAGTAGTTAGGATGTGCATTGGACAATGTATGTTGAATTCAATTTTATTGTGCAGTGCCCCAATGGTCATACCCTCTGTTCTTCATGTAAAACAAGGGTAGACAACCGTTGTCCGACGTGCAGACAAGAGCTCGGCGATATCAGGTGTCTAGCGTTAGAGAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCCCGGAGATATTGCCTTACTACAGCAAACTCAAACATGAGTCTGCCTGTTACTTTAGACCATATACCTGTCCTTATGCTGGATCAGACTGTCCAGTTGATGGGGATATTCCTTTCCTTGTTTCTCATCTTCGTGACGATCACAAAGTCGACATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAATGCTACATGGATGCTAACTGTGAGTATCTGTTGTTTTGATTGAGCTCAGTTATTTTACAACTTATCTGATGCTCTTATTTTTGGTTTGCTCAGGTGTTTCACTGTTTTGGGCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCGGTTTACATGGCGTTTCTCCGATTCATGGGGGACGAAACGGATGCTCGAAACTACAGTTACAGCCTTGAGGTGGGTGGAAATGGGAGGAAGCTGATATGGGAGGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTCGAGACAGCCACGATGGCCTCATTATACAACGAAACATGGCGCTCTTCTTTTCGGGCGGAGAAAGGAAAGAGCTGAAGCTTCGGATCACAGGACGGATTTGGAAAGAACAAAATAAACAGTAACATTGTTAGAGGTTCAACTCTATGATGTATGTGACTGTTATGCATAACATTTTCTCTTCAACTTTATCCAATCTTGAATCATCAGCTCCTCAGCAGCTCATAATCACTTTTCAAACCAATCTCCAATTCCAACTTCTTTGTAATTCAGATTAGCTTTTACAATGTCAAACTTTGAGGCTTGTTTTGGAAACCCTTTTCACCACAATTTAGTTGCTTATATCATTTGGTTTCTTTTTTCAATAAAACTTTAGCTAAAACGTGTAAGCCTCGACATCATCTAAGCGTTCAAATAGCCAAAATATGCTCTACACTAAGCTGTCCAACCAACCTCCCGGGTGAAACGTGCATTCAAGAAAACGAAGCATGCCCAGAAGTAAACGAAGCCTAAAAGCCATTGGAAGGGGATTTGGCTTTGCAAACATAATTGAACAATATTTATTATCAACCTGGACGGTTGATTATAATATCATCAACACATTCAAGGAAAGATTTAAAAAAATGATAAAATATTTATTAAAATTCCAAAGGTAAACGGCCTTGGAGGGTAAATACAAGCATAAGCAACAGATATACCAAAGAATTGTCATTGACAAAGCCGCCGACGATCCTTGTTAGCGGCTATAACGAAGAACAAAAGAGCAGAACAGAAATAGTCCCGTCGTTCGTACATGATATCAATATGTCATATGTGCATATTACCCACATATTTAATTACACCTATTAGTATTATTATTAATTACTAAATCATCTTAGCTTTTCCCCATCAGGACAATGAAGCAGCAGCAATCTGATCCAGGCCGAGGTCCATTATTTCATATACACTTTCAAGGAACGTTGCTTCACTTGTACCAGGAAGCATACAATCCATCGCTTCTTCCACCCACTCTTCGATCACTGATTTCTTGCTCAACGTTTCTCTGCACATTATGCTACCGATGTCGAATGGTGTGAGCCCTCTCTTCGCCCCTTTCTTCAAAAGCATCGTTGAAATGCACAGTGTACGAGCACATTCAAGAGGCAGCTCCCATCCATGGAACTTGAGAACCGCGATATCTTCCTCTGCGTCGAGTGAATTTATGTACTCTAATGTCTCAGCATCATATGGTTGCTTGGCTTGTGACCAATACAGCCAGTCAAATGTACAATCTTCAAACTG

mRNA sequence

TTGTTGGGAATGAAATAATAAAAAGTGAGAAGGAGAGGAAGAGGTGAGAAAGAAGGAAGGGAAGTTGGGTTGATTTATAATAACCCCAATCCATATCCACATCGACCCATCAGAAAAATGGGAATGAAAAAGAAAAGGAAAAGCTTCCATTATTAACTAATCTCTCCTTCTAAATCCCACCTTAATTCTTCCTTCTCCCTGTTTCTGTAATCTCAGCCACCCAATTCATCTCTCTGTTCAACCATTTTCAATCCTCTCTTCTTCCTTCACTCTTCCCATTCTCCCATTTTCCCAATTCCCTTCTAAAATTTTCCCCCAATTCGGCCATATTAATGGCGGAAACCTCTTCCCCATCAAAACCCATCAACCCATTTTGATTCTCCTTCGGTTCTTGTTCCGGATTTCATTGTTTTTCTTTGTTGTTGTGCCAAAATGGAGCTGGATGGCATCGAGGGCGTGCCATCCATGGATGTGATGGACGAGGAGGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCCATTTCCAAGCCTCGGATCAACAATAACGACAATCCCACCACCACAAGTGTTCACGAGCTTCTCGAATGTCCCGTTTGCACCAATTCTATGTATCCCCCAATTCATCAGTGCCCCAATGGTCATACCCTCTGTTCTTCATGTAAAACAAGGGTAGACAACCGTTGTCCGACGTGCAGACAAGAGCTCGGCGATATCAGGTGTCTAGCGTTAGAGAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCCCGGAGATATTGCCTTACTACAGCAAACTCAAACATGAGTCTGCCTGTTACTTTAGACCATATACCTGTCCTTATGCTGGATCAGACTGTCCAGTTGATGGGGATATTCCTTTCCTTGTTTCTCATCTTCGTGACGATCACAAAGTCGACATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAATGCTACATGGATGCTAACTGTGTTTCACTGTTTTGGGCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCGGTTTACATGGCGTTTCTCCGATTCATGGGGGACGAAACGGATGCTCGAAACTACAGTTACAGCCTTGAGGTGGGTGGAAATGGGAGGAAGCTGATATGGGAGGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTCGAGACAGCCACGATGGCCTCATTATACAACGAAACATGGCGCTCTTCTTTTCGGGCGGAGAAAGGAAAGAGCTGAAGCTTCGGATCACAGGACGGATTTGGAAAGAACAAAATAAACAGTAACATTGTTAGAGGTTCAACTCTATGATGACAATGAAGCAGCAGCAATCTGATCCAGGCCGAGGTCCATTATTTCATATACACTTTCAAGGAACGTTGCTTCACTTGTACCAGGAAGCATACAATCCATCGCTTCTTCCACCCACTCTTCGATCACTGATTTCTTGCTCAACGTTTCTCTGCACATTATGCTACCGATGTCGAATGGTGTGAGCCCTCTCTTCGCCCCTTTCTTCAAAAGCATCGTTGAAATGCACAGTGTACGAGCACATTCAAGAGGCAGCTCCCATCCATGGAACTTGAGAACCGCGATATCTTCCTCTGCGTCGAGTGAATTTATGTACTCTAATGTCTCAGCATCATATGGTTGCTTGGCTTGTGACCAATACAGCCAGTCAAATGTACAATCTTCAAACTG

Coding sequence (CDS)

ATGGAGCTGGATGGCATCGAGGGCGTGCCATCCATGGATGTGATGGACGAGGAGGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCCATTTCCAAGCCTCGGATCAACAATAACGACAATCCCACCACCACAAGTGTTCACGAGCTTCTCGAATGTCCCGTTTGCACCAATTCTATGTATCCCCCAATTCATCAGTGCCCCAATGGTCATACCCTCTGTTCTTCATGTAAAACAAGGGTAGACAACCGTTGTCCGACGTGCAGACAAGAGCTCGGCGATATCAGGTGTCTAGCGTTAGAGAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCCCGGAGATATTGCCTTACTACAGCAAACTCAAACATGAGTCTGCCTGTTACTTTAGACCATATACCTGTCCTTATGCTGGATCAGACTGTCCAGTTGATGGGGATATTCCTTTCCTTGTTTCTCATCTTCGTGACGATCACAAAGTCGACATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAATGCTACATGGATGCTAACTGTGTTTCACTGTTTTGGGCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCGGTTTACATGGCGTTTCTCCGATTCATGGGGGACGAAACGGATGCTCGAAACTACAGTTACAGCCTTGAGGTGGGTGGAAATGGGAGGAAGCTGATATGGGAGGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTCGAGACAGCCACGATGGCCTCATTATACAACGAAACATGGCGCTCTTCTTTTCGGGCGGAGAAAGGAAAGAGCTGAAGCTTCGGATCACAGGACGGATTTGGAAAGAACAAAATAAACAGTAA

Protein sequence

MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ

Homology

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BLAST of Cp4.1LG12g04730 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 7.1e-148
Identity = 244/314 (77.71%), Postives = 270/314 (85.99%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN-----------PTTTSVHE 60
           M+LD ++   +MDV D+E+    RH  + S+SK    NN+            PTTTSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CK  + GCPEI PYYSKLKHE+ C FRPY+CPYAGS+C V GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARNY+YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]

BLAST of Cp4.1LG12g04730 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 6.2e-136
Identity = 232/313 (74.12%), Postives = 257/313 (82.11%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSI-------SKPRINNNDNPT----TTSVHE 60
           ME D +E V S      ++    +  QF S        +   + N   PT     TSV+E
Sbjct: 1   METDSMECVSSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CKF   GCPEI PYYSKLKHES C FRPY+CPYAGS+C + GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           H+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDE
Sbjct: 181 HAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
            DAR+YSYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG+RKEL
Sbjct: 241 EDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQN 303
           KLR+TG+IWKEQ+
Sbjct: 301 KLRVTGKIWKEQH 313

[Close]

BLAST of Cp4.1LG12g04730 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 483.0 bits (1242), Expect = 2.4e-135
Identity = 225/291 (77.32%), Postives = 250/291 (85.91%), Query Frame = 1


Query: 11  SMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNG 70
           S+D + ++D+  Q+H QF S              TSV+ELLECPVCTNSMYPPIHQC NG
Sbjct: 5   SIDSVIDDDEIHQKH-QFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNG 64

Query: 71  HTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKH 130
           HTLCS+CK+RV NRCPTCRQELGDIRCLALEK+AESL+L CK+   GC  I PYYSKLKH
Sbjct: 65  HTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKH 124

Query: 131 ESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENA 190
           ES C FRPY+CPYAGS+C   GDI FLV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENA
Sbjct: 125 ESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENA 184

Query: 191 TWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIW 250
           TWMLTVF CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE DARNY+YSLEVGG+GRK  W
Sbjct: 185 TWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTW 244

Query: 251 EGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           EG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 245 EGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]

BLAST of Cp4.1LG12g04730 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 2.9e-125
Identity = 208/290 (71.72%), Postives = 238/290 (82.07%), Query Frame = 1


Query: 15  MDEEDKTLQRHCQFPSISKPR---INNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C FRPYTCPYAGS+C V GDIP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ +SYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of Cp4.1LG12g04730 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.0e-123
Identity = 196/259 (75.68%), Postives = 226/259 (87.26%), Query Frame = 1


Query: 43  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEK 102
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK RV N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 103 IAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLR 162
           +AESL++ C++   GC +I PYYSKLKHE  C FR Y+CPYAGS+C V GDIP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 163 DDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 222
           DDHKVDMH GCTFNHRYVK+NP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAF
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 223 LRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFS 282
           LRFMGDE +A+ +SYSLEVG + RKL W+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 283 GGERKELKLRITGRIWKEQ 302
           G +++ELKLR+TGRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of Cp4.1LG12g04730 vs. TrEMBL
Match: A0A0A0KF08_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_6G087840 PE=3 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 8.9e-182
Identity = 296/304 (97.37%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC E
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]

BLAST of Cp4.1LG12g04730 vs. TrEMBL
Match: M5XLI4_PRUPE (E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.3e-151
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGIE V S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDMMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC   GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]

BLAST of Cp4.1LG12g04730 vs. TrEMBL
Match: V4U1Z4_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.4e-150
Identity = 253/310 (81.61%), Postives = 272/310 (87.74%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN---------PTTTSVHELL 60
           MEL  IE VPS D+ DE++    R  QFPSISKP  N N+N         P TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHS 180
           K+ + GCPEI PYYSKLKHE+ C FRPY CPYAGS+C + GDIPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARNY+YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]

BLAST of Cp4.1LG12g04730 vs. TrEMBL
Match: A0A067H6D5_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.4e-150
Identity = 253/310 (81.61%), Postives = 272/310 (87.74%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN---------PTTTSVHELL 60
           MEL  IE VPS D+ DE++    R  QFPSISKP  N N+N         P TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHS 180
           K+ + GCPEI PYYSKLKHE+ C FRPY CPYAGS+C + GDIPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARNY+YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]

BLAST of Cp4.1LG12g04730 vs. TrEMBL
Match: A9PEZ7_POPTR (E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0002s17250g PE=2 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 2.6e-149
Identity = 252/316 (79.75%), Postives = 273/316 (86.39%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQ-FPSISKPRI-----NNNDNPT---------TT 60
           MELD IE VPS+D+ DE++     H   FPS+SKP       NNN N           TT
Sbjct: 1   MELDSIECVPSLDLTDEDEIHHHHHLHHFPSVSKPHTTTTTNNNNSNSNSNTVASAIHTT 60

Query: 61  SVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAE 120
           SVHELLECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AE
Sbjct: 61  SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAE 120

Query: 121 SLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDH 180
           SL+L CK+ + GCPEI PYYSKLKHE+ C FRPY+CPYAGS+C + GDIPFLV+HLRDDH
Sbjct: 121 SLELPCKYMSLGCPEIFPYYSKLKHETLCNFRPYSCPYAGSECAIVGDIPFLVAHLRDDH 180

Query: 181 KVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240
           KVDMHSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF
Sbjct: 181 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240

Query: 241 MGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGE 300
           MGDE +ARNYSYSLEVGGNGRKLIWEG PRSIRD+H+KVRDSHDGLIIQRNMALFFSGG+
Sbjct: 241 MGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD 300

Query: 301 RKELKLRITGRIWKEQ 302
           RKELKLR+TGRIWKEQ
Sbjct: 301 RKELKLRVTGRIWKEQ 316

[Close]

BLAST of Cp4.1LG12g04730 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 524.6 bits (1350), Expect = 4.0e-149
Identity = 244/314 (77.71%), Postives = 270/314 (85.99%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN-----------PTTTSVHE 60
           M+LD ++   +MDV D+E+    RH  + S+SK    NN+            PTTTSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CK  + GCPEI PYYSKLKHE+ C FRPY+CPYAGS+C V GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARNY+YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]

BLAST of Cp4.1LG12g04730 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 485.0 bits (1247), Expect = 3.5e-137
Identity = 232/313 (74.12%), Postives = 257/313 (82.11%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSI-------SKPRINNNDNPT----TTSVHE 60
           ME D +E V S      ++    +  QF S        +   + N   PT     TSV+E
Sbjct: 1   METDSMECVSSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CKF   GCPEI PYYSKLKHES C FRPY+CPYAGS+C + GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           H+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDE
Sbjct: 181 HAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
            DAR+YSYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG+RKEL
Sbjct: 241 EDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQN 303
           KLR+TG+IWKEQ+
Sbjct: 301 KLRVTGKIWKEQH 313

[Close]

BLAST of Cp4.1LG12g04730 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2)

HSP 1 Score: 449.5 bits (1155), Expect = 1.6e-126
Identity = 208/290 (71.72%), Postives = 238/290 (82.07%), Query Frame = 1


Query: 15  MDEEDKTLQRHCQFPSISKPR---INNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C FRPYTCPYAGS+C V GDIP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ +SYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of Cp4.1LG12g04730 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 441.8 bits (1135), Expect = 3.4e-124
Identity = 196/259 (75.68%), Postives = 226/259 (87.26%), Query Frame = 1


Query: 43  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEK 102
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK RV N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 103 IAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLR 162
           +AESL++ C++   GC +I PYYSKLKHE  C FR Y+CPYAGS+C V GDIP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 163 DDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 222
           DDHKVDMH GCTFNHRYVK+NP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAF
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 223 LRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFS 282
           LRFMGDE +A+ +SYSLEVG + RKL W+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 283 GGERKELKLRITGRIWKEQ 302
           G +++ELKLR+TGRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of Cp4.1LG12g04730 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein)

HSP 1 Score: 371.3 bits (952), Expect = 5.6e-103
Identity = 168/204 (82.35%), Postives = 185/204 (90.69%), Query Frame = 1


Query: 98  LALEKIAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFL 157
           +ALEK+AESL+L CK+   GC  I PYYSKLKHES C FRPY+CPYAGS+C   GDI FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 158 VSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAP 217
           V+HLRDDHKVDMH+GCTFNHRYVK+NP EVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 218 VYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNM 277
           VYMAFLRFMGDE DARNY+YSLEVGG+GRK  WEG PRS+RD+H+KVRDSHDGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 278 ALFFSGGERKELKLRITGRIWKEQ 302
           ALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]

BLAST of Cp4.1LG12g04730 vs. NCBI nr
Match: gi|449445654|ref|XP_004140587.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 1.3e-181
Identity = 296/304 (97.37%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC E
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]

BLAST of Cp4.1LG12g04730 vs. NCBI nr
Match: gi|659120058|ref|XP_008459990.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 3.7e-181
Identity = 295/304 (97.04%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC E
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE+DARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]

BLAST of Cp4.1LG12g04730 vs. NCBI nr
Match: gi|470141909|ref|XP_004306667.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 544.3 bits (1401), Expect = 1.4e-151
Identity = 251/301 (83.39%), Postives = 273/301 (90.70%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           M+ + +E VP  D+MDE D+   R  Q  ++ KPR N N+NP TTSVHELLECPVCTNSM
Sbjct: 1   MDPENMEIVPPSDLMDE-DEIHGRPRQLFTVPKPRNNGNNNPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC V GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRK+IWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKIIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]

BLAST of Cp4.1LG12g04730 vs. NCBI nr
Match: gi|645254668|ref|XP_008233143.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X2 [Prunus mume])

HSP 1 Score: 543.9 bits (1400), Expect = 1.8e-151
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGIE V S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDLMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC   GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]

BLAST of Cp4.1LG12g04730 vs. NCBI nr
Match: gi|596013570|ref|XP_007218711.1| (hypothetical protein PRUPE_ppa008943mg [Prunus persica])

HSP 1 Score: 543.9 bits (1400), Expect = 1.8e-151
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1


Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGIE V S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDMMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC   GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SINA3_ARATH	7.1e-148	77.71	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1	[more]
SINA4_ARATH	6.2e-136	74.12	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1	[more]
SINA5_ARATH	2.4e-135	77.32	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2	[more]
SINA2_ARATH	2.9e-125	71.72	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1	[more]
SINA1_ARATH	6.0e-123	75.68	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE...	[more]

BLAST of Cp4.1LG12g04730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF08_CUCSA	8.9e-182	97.37	E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_6G087840 PE=3 SV=1	[more]
M5XLI4_PRUPE	1.3e-151	83.39	E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1	[more]
V4U1Z4_9ROSI	1.4e-150	81.61	E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1	[more]
A0A067H6D5_CITSI	1.4e-150	81.61	E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1	[more]
A9PEZ7_POPTR	2.6e-149	79.75	E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0002s17250g PE=2 SV=...	[more]

BLAST of Cp4.1LG12g04730 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61790.1	4.0e-149	77.71	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	3.5e-137	74.12	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	1.6e-126	71.72	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	3.4e-124	75.68	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	5.6e-103	82.35	TRAF-like superfamily protein	[more]

BLAST of Cp4.1LG12g04730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445654\|ref\|XP_004140587.1\|	1.3e-181	97.37	PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus]	[more]
gi\|659120058\|ref\|XP_008459990.1\|	3.7e-181	97.04	PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo]	[more]
gi\|470141909\|ref\|XP_004306667.1\|	1.4e-151	83.39	PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Fragaria vesca subsp. vesca]	[more]
gi\|645254668\|ref\|XP_008233143.1\|	1.8e-151	83.39	PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X2 [Prunus mume]	[more]
gi\|596013570\|ref\|XP_007218711.1\|	1.8e-151	83.39	hypothetical protein PRUPE_ppa008943mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination
GO:0007275	multicellular organism development
GO:0006511	ubiquitin-dependent protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR018121	7-in-absentia-prot_TRAF-dom
IPR013323	SIAH-type domain
IPR013083	Znf_RING/FYVE/PHD
IPR013010	Znf_SIAH
IPR008974	TRAF-like
IPR004162	SINA-like
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04730.1	Cp4.1LG12g04730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 53..89 score: 9
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	SEVEN IN ABSENTIA HOMOLOG	coord: 11..304 score: 1.2E
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 171..298 score: 2.3
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 106..298 score: 8.5
IPR013010	Zinc finger, SIAH-type	PROFILE	PS51081	ZF_SIAH	coord: 106..166 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 39..118 score: 9.2
IPR013323	SIAH-type domain	GENE3D	G3DSA:3.90.890.10		coord: 119..161 score: 9.9
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 95..294 score: 3.3
None	No IPR available	PANTHER	PTHR10315:SF34	E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED	coord: 11..304 score: 1.2E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 47..93 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g04730	CmaCh17G005590	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g04730	CmaCh08G001100	Cucurbita maxima (Rimu)	cmacpeB901
Cp4.1LG12g04730	CmoCh17G005390	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g04730	CmoCh08G001160	Cucurbita moschata (Rifu)	cmocpeB838
Cp4.1LG12g04730	Carg04939	Silver-seed gourd	carcpeB0119
Cp4.1LG12g04730	Carg26120	Silver-seed gourd	carcpeB1339

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g04730	Cp4.1LG17g10090	Cucurbita pepo (Zucchini)	cpecpeB166

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g04730	Silver-seed gourd	carcpeB0120
Cp4.1LG12g04730	Cucurbita pepo (Zucchini)	cpecpeB172
Cp4.1LG12g04730	Cucurbita maxima (Rimu)	cmacpeB906
Cp4.1LG12g04730	Cucurbita moschata (Rifu)	cmocpeB842
Cp4.1LG12g04730	Watermelon (97103) v1	cpewmB155