CmaCh17G005590 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G005590
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionE3 ubiquitin-protein ligase
LocationCma_Chr17 : 4545506 .. 4547723 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATTTATAATATCCCCAATAACCCCAATCCACATCCACATCTCTGTCTCATCAGAAAAATGGGAATGAAAAAGAAAAGGAAAAGCTTCCATTATTAACTAATCCCTCCTTCTAAATCCCACCTTAATTCTTCCTTCTCCCTGTTTCTGTAATCTCAGCCACCCAATTCATCTCTCTGTTCAACCATTTTCAATCCGCTCTTCTTCATTCATCTCTTCCCATTCTCCCATTCTCCCAATTCCCTTCTAAAATTTTCCCCCAATTCGGCCATTTTAATGGCGGAAACCTCTTCCCCATCAAAACCCATCAACCCATTTTGATTCTCCTTCGGTTCTTCTTGCAGATTTCATTGTTTTTCTTTGTTGTTGTGCCAAAATGGAGCTGGATGGCATCGAGGGCGTGCCATCCATGGATGTGATGGACGAGGAGGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCCATTTCTAAGCCTCGGATCAACAATAACGACAATCCCACCACCACAAGTGTTCACGAGCTTCTTGAATGTCCCGTCTGCACCAATTCTATGTATCCCCCAATTCATCAGGTTCCTTCCATGCCCCCCTTTTCCCCCTTTTCTTGCATCACTGGTTTCTGATCTGTTTGATTCATTCTGAAATTTTGGGTTTGTTGGTTTAGATTCTTAACATTGATCTTCTGTTCAATGGGGCCATTCCTTTTGTCGATCCATCGGTTCTTGTAATGTTTTCTTTATTTTTTTCTATTGTTATTGTTATTCTTTTGCCTTTCGTTTGTCAGTCTGCAATGTGTCAAAATTGTTACCTAAGGCCCTGCGGTTCCATATACTCATAACCAAAAATGAAAAGCCATTATGTTGTTATCATTTGTTGTTCTTTAGTCAACTCCGTTCAGAAACTGAAATCAATTGTGCCCTTTTTGGGGTTTGTTTAATGAGTACAAGGAGGAGGAATACAGAAACTCTATCTCATATTATAGGCTAAATATCATCAATTGGGGAAGTGGGAATCCTCACAACTATCCTAGCTGCAGGATCGGCCTTGCATTTGACAGGAATTTACTTCATTTTTATGTTCCTACCCCGTTCATAGGCGCTTTGTAATAGCTCAAGCCCACCGCTAGCAAGTATTGCCCTCTTTGGACTTTTCTTCAAGATTTTTCAAAACATGTCGGCTGAGAAGAGGTCTTATAAAGAGTATTTTGTTCTCCTAGCCAACCAACGTGGCTAAAAATATGAATACTGAGATCATCTCTTTCTCTATTTCATATGAGATTGAATATTGTGGAGGGTTTTTGTTAGTAATCCAATGGTCAGAGCATCTCTTTTGCTGACAACAGACTGTTTCTTAAGTGAGTTTTAAAGGCTGAAGTAGTTAGGATGTGCATTGGACAATGTATGTTGAATTCAATTTTATTGTGCAGTGCCCCAATGGTCATACCCTCTGTTCTTCATGTAAAACAAGGGTAGACAACCGTTGTCCGACATGCAGACAAGAGCTCGGCGATATCAGGTGTCTAGCATTAGAGAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCCCGGAGATATTGCCATACTACAGCAAACTCAAACACGAGTCTGCCTGTTACTTTAGACCATATACCTGCCCTTATGCTGGATCAGACTGTCCAGTTGATGGGGATATTCCTTTCCTTGTTTCTCATCTTCGTGATGATCACAAAGTCGACATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAATGCTACATGGATGCTAACTGTGAGTATCTGTTGTTTTGATTCAGCTCAGTTATTTTACAACTATCTGATGCTCTTATTTTTGGTTTGCTCAGGTGTTTCACTGTTTTGGGCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCGGTTTACATGGCGTTTCTCCGATTCATGGGGGACGAAACGGATGCTCGAAACTACAGTTACAGCCTTGAGGTGGGTGGAAATGGGAGGAAGCTGATATGGGAGGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTCGAGACAGCCACGATGGCCTCATTATACAACGAAACATGGCGCTCTTCTTTTCGGGTGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACAGGACGGATTTGGAAAGAACAAAATAAACAGTAA

mRNA sequence

TTGATTTATAATATCCCCAATAACCCCAATCCACATCCACATCTCTGTCTCATCAGAAAAATGGGAATGAAAAAGAAAAGGAAAAGCTTCCATTATTAACTAATCCCTCCTTCTAAATCCCACCTTAATTCTTCCTTCTCCCTGTTTCTGTAATCTCAGCCACCCAATTCATCTCTCTGTTCAACCATTTTCAATCCGCTCTTCTTCATTCATCTCTTCCCATTCTCCCATTCTCCCAATTCCCTTCTAAAATTTTCCCCCAATTCGGCCATTTTAATGGCGGAAACCTCTTCCCCATCAAAACCCATCAACCCATTTTGATTCTCCTTCGGTTCTTCTTGCAGATTTCATTGTTTTTCTTTGTTGTTGTGCCAAAATGGAGCTGGATGGCATCGAGGGCGTGCCATCCATGGATGTGATGGACGAGGAGGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCCATTTCTAAGCCTCGGATCAACAATAACGACAATCCCACCACCACAAGTGTTCACGAGCTTCTTGAATGTCCCGTCTGCACCAATTCTATGTATCCCCCAATTCATCAGTGCCCCAATGGTCATACCCTCTGTTCTTCATGTAAAACAAGGGTAGACAACCGTTGTCCGACATGCAGACAAGAGCTCGGCGATATCAGGTGTCTAGCATTAGAGAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCCCGGAGATATTGCCATACTACAGCAAACTCAAACACGAGTCTGCCTGTTACTTTAGACCATATACCTGCCCTTATGCTGGATCAGACTGTCCAGTTGATGGGGATATTCCTTTCCTTGTTTCTCATCTTCGTGATGATCACAAAGTCGACATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAATGCTACATGGATGCTAACTGTGTTTCACTGTTTTGGGCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCGGTTTACATGGCGTTTCTCCGATTCATGGGGGACGAAACGGATGCTCGAAACTACAGTTACAGCCTTGAGGTGGGTGGAAATGGGAGGAAGCTGATATGGGAGGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTCGAGACAGCCACGATGGCCTCATTATACAACGAAACATGGCGCTCTTCTTTTCGGGTGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACAGGACGGATTTGGAAAGAACAAAATAAACAGTAA

Coding sequence (CDS)

ATGGAGCTGGATGGCATCGAGGGCGTGCCATCCATGGATGTGATGGACGAGGAGGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCCATTTCTAAGCCTCGGATCAACAATAACGACAATCCCACCACCACAAGTGTTCACGAGCTTCTTGAATGTCCCGTCTGCACCAATTCTATGTATCCCCCAATTCATCAGTGCCCCAATGGTCATACCCTCTGTTCTTCATGTAAAACAAGGGTAGACAACCGTTGTCCGACATGCAGACAAGAGCTCGGCGATATCAGGTGTCTAGCATTAGAGAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCCCGGAGATATTGCCATACTACAGCAAACTCAAACACGAGTCTGCCTGTTACTTTAGACCATATACCTGCCCTTATGCTGGATCAGACTGTCCAGTTGATGGGGATATTCCTTTCCTTGTTTCTCATCTTCGTGATGATCACAAAGTCGACATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAATGCTACATGGATGCTAACTGTGTTTCACTGTTTTGGGCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCGGTTTACATGGCGTTTCTCCGATTCATGGGGGACGAAACGGATGCTCGAAACTACAGTTACAGCCTTGAGGTGGGTGGAAATGGGAGGAAGCTGATATGGGAGGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTCGAGACAGCCACGATGGCCTCATTATACAACGAAACATGGCGCTCTTCTTTTCGGGTGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACAGGACGGATTTGGAAAGAACAAAATAAACAGTAA

Protein sequence

MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ
Homology
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BLAST of CmaCh17G005590 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 7.1e-148
Identity = 244/314 (77.71%), Postives = 270/314 (85.99%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN-----------PTTTSVHE 60
           M+LD ++   +MDV D+E+    RH  + S+SK    NN+            PTTTSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CK  + GCPEI PYYSKLKHE+ C FRPY+CPYAGS+C V GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARNY+YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]
BLAST of CmaCh17G005590 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 6.2e-136
Identity = 232/313 (74.12%), Postives = 257/313 (82.11%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSI-------SKPRINNNDNPT----TTSVHE 60
           ME D +E V S      ++    +  QF S        +   + N   PT     TSV+E
Sbjct: 1   METDSMECVSSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CKF   GCPEI PYYSKLKHES C FRPY+CPYAGS+C + GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           H+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDE
Sbjct: 181 HAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
            DAR+YSYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG+RKEL
Sbjct: 241 EDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQN 303
           KLR+TG+IWKEQ+
Sbjct: 301 KLRVTGKIWKEQH 313

[Close]
BLAST of CmaCh17G005590 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 483.0 bits (1242), Expect = 2.4e-135
Identity = 225/291 (77.32%), Postives = 250/291 (85.91%), Query Frame = 1 

Query: 11  SMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNG 70
           S+D + ++D+  Q+H QF S              TSV+ELLECPVCTNSMYPPIHQC NG
Sbjct: 5   SIDSVIDDDEIHQKH-QFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNG 64

Query: 71  HTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKH 130
           HTLCS+CK+RV NRCPTCRQELGDIRCLALEK+AESL+L CK+   GC  I PYYSKLKH
Sbjct: 65  HTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKH 124

Query: 131 ESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENA 190
           ES C FRPY+CPYAGS+C   GDI FLV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENA
Sbjct: 125 ESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENA 184

Query: 191 TWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIW 250
           TWMLTVF CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE DARNY+YSLEVGG+GRK  W
Sbjct: 185 TWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTW 244

Query: 251 EGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           EG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 245 EGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]
BLAST of CmaCh17G005590 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 2.9e-125
Identity = 208/290 (71.72%), Postives = 238/290 (82.07%), Query Frame = 1 

Query: 15  MDEEDKTLQRHCQFPSISKPR---INNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C FRPYTCPYAGS+C V GDIP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ +SYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]
BLAST of CmaCh17G005590 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.0e-123
Identity = 196/259 (75.68%), Postives = 226/259 (87.26%), Query Frame = 1 

Query: 43  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEK 102
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK RV N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 103 IAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLR 162
           +AESL++ C++   GC +I PYYSKLKHE  C FR Y+CPYAGS+C V GDIP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 163 DDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 222
           DDHKVDMH GCTFNHRYVK+NP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAF
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 223 LRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFS 282
           LRFMGDE +A+ +SYSLEVG + RKL W+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 283 GGERKELKLRITGRIWKEQ 302
           G +++ELKLR+TGRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]
BLAST of CmaCh17G005590 vs. TrEMBL
Match: A0A0A0KF08_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_6G087840 PE=3 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 8.9e-182
Identity = 296/304 (97.37%), Postives = 302/304 (99.34%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC E
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CmaCh17G005590 vs. TrEMBL
Match: M5XLI4_PRUPE (E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.3e-151
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGIE V S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDMMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC   GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]
BLAST of CmaCh17G005590 vs. TrEMBL
Match: V4U1Z4_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.4e-150
Identity = 253/310 (81.61%), Postives = 272/310 (87.74%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN---------PTTTSVHELL 60
           MEL  IE VPS D+ DE++    R  QFPSISKP  N N+N         P TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHS 180
           K+ + GCPEI PYYSKLKHE+ C FRPY CPYAGS+C + GDIPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARNY+YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]
BLAST of CmaCh17G005590 vs. TrEMBL
Match: A0A067H6D5_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.4e-150
Identity = 253/310 (81.61%), Postives = 272/310 (87.74%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN---------PTTTSVHELL 60
           MEL  IE VPS D+ DE++    R  QFPSISKP  N N+N         P TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHS 180
           K+ + GCPEI PYYSKLKHE+ C FRPY CPYAGS+C + GDIPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARNY+YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]
BLAST of CmaCh17G005590 vs. TrEMBL
Match: A9PEZ7_POPTR (E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0002s17250g PE=2 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 2.6e-149
Identity = 252/316 (79.75%), Postives = 273/316 (86.39%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQ-FPSISKPRI-----NNNDNPT---------TT 60
           MELD IE VPS+D+ DE++     H   FPS+SKP       NNN N           TT
Sbjct: 1   MELDSIECVPSLDLTDEDEIHHHHHLHHFPSVSKPHTTTTTNNNNSNSNSNTVASAIHTT 60

Query: 61  SVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAE 120
           SVHELLECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AE
Sbjct: 61  SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAE 120

Query: 121 SLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDH 180
           SL+L CK+ + GCPEI PYYSKLKHE+ C FRPY+CPYAGS+C + GDIPFLV+HLRDDH
Sbjct: 121 SLELPCKYMSLGCPEIFPYYSKLKHETLCNFRPYSCPYAGSECAIVGDIPFLVAHLRDDH 180

Query: 181 KVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240
           KVDMHSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF
Sbjct: 181 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240

Query: 241 MGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGE 300
           MGDE +ARNYSYSLEVGGNGRKLIWEG PRSIRD+H+KVRDSHDGLIIQRNMALFFSGG+
Sbjct: 241 MGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD 300

Query: 301 RKELKLRITGRIWKEQ 302
           RKELKLR+TGRIWKEQ
Sbjct: 301 RKELKLRVTGRIWKEQ 316

[Close]
BLAST of CmaCh17G005590 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 524.6 bits (1350), Expect = 4.0e-149
Identity = 244/314 (77.71%), Postives = 270/314 (85.99%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN-----------PTTTSVHE 60
           M+LD ++   +MDV D+E+    RH  + S+SK    NN+            PTTTSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CK  + GCPEI PYYSKLKHE+ C FRPY+CPYAGS+C V GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARNY+YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]
BLAST of CmaCh17G005590 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 485.0 bits (1247), Expect = 3.5e-137
Identity = 232/313 (74.12%), Postives = 257/313 (82.11%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSI-------SKPRINNNDNPT----TTSVHE 60
           ME D +E V S      ++    +  QF S        +   + N   PT     TSV+E
Sbjct: 1   METDSMECVSSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDM 180
            CKF   GCPEI PYYSKLKHES C FRPY+CPYAGS+C + GDIPFLV+HLRDDHKVDM
Sbjct: 121 PCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           H+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDE
Sbjct: 181 HAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDE 240

Query: 241 TDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
            DAR+YSYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG+RKEL
Sbjct: 241 EDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQN 303
           KLR+TG+IWKEQ+
Sbjct: 301 KLRVTGKIWKEQH 313

[Close]
BLAST of CmaCh17G005590 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2)

HSP 1 Score: 449.5 bits (1155), Expect = 1.6e-126
Identity = 208/290 (71.72%), Postives = 238/290 (82.07%), Query Frame = 1 

Query: 15  MDEEDKTLQRHCQFPSISKPR---INNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C FRPYTCPYAGS+C V GDIP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ +SYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]
BLAST of CmaCh17G005590 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 441.8 bits (1135), Expect = 3.4e-124
Identity = 196/259 (75.68%), Postives = 226/259 (87.26%), Query Frame = 1 

Query: 43  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEK 102
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK RV N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 103 IAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLR 162
           +AESL++ C++   GC +I PYYSKLKHE  C FR Y+CPYAGS+C V GDIP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 163 DDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 222
           DDHKVDMH GCTFNHRYVK+NP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAF
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 223 LRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFS 282
           LRFMGDE +A+ +SYSLEVG + RKL W+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 283 GGERKELKLRITGRIWKEQ 302
           G +++ELKLR+TGRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]
BLAST of CmaCh17G005590 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein)

HSP 1 Score: 371.3 bits (952), Expect = 5.6e-103
Identity = 168/204 (82.35%), Postives = 185/204 (90.69%), Query Frame = 1 

Query: 98  LALEKIAESLKLACKFCTFGCPEILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFL 157
           +ALEK+AESL+L CK+   GC  I PYYSKLKHES C FRPY+CPYAGS+C   GDI FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 158 VSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAP 217
           V+HLRDDHKVDMH+GCTFNHRYVK+NP EVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 218 VYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNM 277
           VYMAFLRFMGDE DARNY+YSLEVGG+GRK  WEG PRS+RD+H+KVRDSHDGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 278 ALFFSGGERKELKLRITGRIWKEQ 302
           ALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]
BLAST of CmaCh17G005590 vs. NCBI nr
Match: gi|449445654|ref|XP_004140587.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 1.3e-181
Identity = 296/304 (97.37%), Postives = 302/304 (99.34%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC E
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CmaCh17G005590 vs. NCBI nr
Match: gi|659120058|ref|XP_008459990.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 3.7e-181
Identity = 295/304 (97.04%), Postives = 302/304 (99.34%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC E
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE+DARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CmaCh17G005590 vs. NCBI nr
Match: gi|470141909|ref|XP_004306667.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 544.3 bits (1401), Expect = 1.4e-151
Identity = 251/301 (83.39%), Postives = 273/301 (90.70%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           M+ + +E VP  D+MDE D+   R  Q  ++ KPR N N+NP TTSVHELLECPVCTNSM
Sbjct: 1   MDPENMEIVPPSDLMDE-DEIHGRPRQLFTVPKPRNNGNNNPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC V GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRK+IWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKIIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]
BLAST of CmaCh17G005590 vs. NCBI nr
Match: gi|645254668|ref|XP_008233143.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X2 [Prunus mume])

HSP 1 Score: 543.9 bits (1400), Expect = 1.8e-151
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGIE V S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDLMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC   GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]
BLAST of CmaCh17G005590 vs. NCBI nr
Match: gi|596013570|ref|XP_007218711.1| (hypothetical protein PRUPE_ppa008943mg [Prunus persica])

HSP 1 Score: 543.9 bits (1400), Expect = 1.8e-151
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1 

Query: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGIE V S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDMMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCPE
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C FRPY CPYAGSDC   GDIPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARNY+YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

The following BLAST results are available for this feature:
BLAST of CmaCh17G005590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SINA3_ARATH7.1e-14877.71E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1[more]
SINA4_ARATH6.2e-13674.12E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1[more]
SINA5_ARATH2.4e-13577.32E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2[more]
SINA2_ARATH2.9e-12571.72E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1[more]
SINA1_ARATH6.0e-12375.68Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE... [more]
BLAST of CmaCh17G005590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF08_CUCSA8.9e-18297.37E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_6G087840 PE=3 SV=1[more]
M5XLI4_PRUPE1.3e-15183.39E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1[more]
V4U1Z4_9ROSI1.4e-15081.61E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1[more]
A0A067H6D5_CITSI1.4e-15081.61E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1[more]
A9PEZ7_POPTR2.6e-14979.75E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0002s17250g PE=2 SV=... [more]
BLAST of CmaCh17G005590 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61790.14.0e-14977.71 Protein with RING/U-box and TRAF-like domains[more]
AT4G27880.13.5e-13774.12 Protein with RING/U-box and TRAF-like domains[more]
AT3G58040.11.6e-12671.72 seven in absentia of Arabidopsis 2[more]
AT2G41980.13.4e-12475.68 Protein with RING/U-box and TRAF-like domains[more]
AT5G53360.15.6e-10382.35 TRAF-like superfamily protein[more]
BLAST of CmaCh17G005590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445654|ref|XP_004140587.1|1.3e-18197.37PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus][more]
gi|659120058|ref|XP_008459990.1|3.7e-18197.04PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo][more]
gi|470141909|ref|XP_004306667.1|1.4e-15183.39PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Fragaria vesca subsp. vesca][more]
gi|645254668|ref|XP_008233143.1|1.8e-15183.39PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X2 [Prunus mume][more]
gi|596013570|ref|XP_007218711.1|1.8e-15183.39hypothetical protein PRUPE_ppa008943mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR004162SINA-like
IPR008974TRAF-like
IPR013010Znf_SIAH
IPR013083Znf_RING/FYVE/PHD
IPR013323SIAH-type domain
IPR0181217-in-absentia-prot_TRAF-dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0007275multicellular organism development
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G005590.1CmaCh17G005590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 53..89
score: 9
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315SEVEN IN ABSENTIA HOMOLOGcoord: 11..304
score: 1.2E
IPR008974TRAF-likeGENE3DG3DSA:2.60.210.10coord: 171..298
score: 2.3
IPR008974TRAF-likeunknownSSF49599TRAF domain-likecoord: 106..298
score: 8.5
IPR013010Zinc finger, SIAH-typePROFILEPS51081ZF_SIAHcoord: 106..166
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 39..118
score: 9.2
IPR013323SIAH-type domainGENE3DG3DSA:3.90.890.10coord: 119..161
score: 9.9
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 95..294
score: 3.3
NoneNo IPR availablePANTHERPTHR10315:SF34E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATEDcoord: 11..304
score: 1.2E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 47..93
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G005590CmoCh17G005390Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G005590CmoCh08G001160Cucurbita moschata (Rifu)cmacmoB372
CmaCh17G005590Cp4.1LG12g04730Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G005590Cp4.1LG17g10090Cucurbita pepo (Zucchini)cmacpeB384
CmaCh17G005590Carg04939Silver-seed gourdcarcmaB0108
CmaCh17G005590Carg26120Silver-seed gourdcarcmaB1333
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh17G005590CmaCh08G001100Cucurbita maxima (Rimu)cmacmaB381
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G005590Cucurbita maxima (Rimu)cmacmaB386
CmaCh17G005590Cucurbita moschata (Rifu)cmacmoB378
CmaCh17G005590Watermelon (97103) v1cmawmB351
CmaCh17G005590Cucurbita pepo (Zucchini)cmacpeB390
CmaCh17G005590Silver-seed gourdcarcmaB0109
CmaCh17G005590Watermelon (97103) v2cmawmbB385