Cp4.1LG12g04550 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG12g04550
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG12 : 4031682 .. 4032093 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATCCGCTCGCAAAAAGAAGCATTGGAAAGGCAGAAGAAAAAGCATAAAATAAAATAAAATAAAATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGGTGCATTGCAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGATGAGAAAGAAGCCGCTGGTATGCTCTTTTCCTTTTTAAATCATTTTTATTTTCTCTTAATAATTAATTGATTGATTATTGTATTTGTATTTGTATTTGTTTCACAGATAAGCTACACATCAAGGTGAAGAACTGA

mRNA sequence

TCATCCGCTCGCAAAAAGAAGCATTGGAAAGGCAGAAGAAAAAGCATAAAATAAAATAAAATAAAATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGGTGCATTGCAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGATGAGAAAGAAGCCGCTGATAAGCTACACATCAAGGTGAAGAACTGA

Coding sequence (CDS)

ATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGGTGCATTGCAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGATGAGAAAGAAGCCGCTGATAAGCTACACATCAAGGTGAAGAACTGA

Protein sequence

MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCDEKEAADKLHIKVKN
BLAST of Cp4.1LG12g04550 vs. Swiss-Prot
Match: ALL6_OLEEU (Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.8e-08
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1

Query: 38 EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCDEKEAADKL-HIKVKN 86
          EA+++ CY+ C KEC +KGNG +FCE+KCD DC  K+  +KL + K KN
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLENYKPKN 50

BLAST of Cp4.1LG12g04550 vs. TrEMBL
Match: A0A0A0KCI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-22
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 1

Query: 3  KKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQSF 62
          KKM+ VLL+C+VV+ AL+ S      KE KYE+KF+AKY+ CYE CEKECLE G NGQSF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCDEKEAADKLHIKVKN 86
          CEVKCDEDC EKE+ADKLHI   N
Sbjct: 64 CEVKCDEDCGEKESADKLHINPAN 87

BLAST of Cp4.1LG12g04550 vs. TrEMBL
Match: A0A0A0KPA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.4e-22
Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MA KMIA+ L+C+VVV ALQ ++A +    AKYEAKF+AKY+ C+E CEKECL  G+GQS
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKE-DVAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 FCEVKCDEDCDEKEAADKLHIKV 84
          +CEVKCDEDCDEKEAADKLHI++
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIEL 82

BLAST of Cp4.1LG12g04550 vs. TrEMBL
Match: A0A0A0KFH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.8e-22
Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQ 60
          MAKKM+ VLL+C+V++  L+ S      KE KYE+KF+A+Y+ CYE CEKECL  G NGQ
Sbjct: 1  MAKKMMGVLLICIVIMAVLEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQ 60

Query: 61 SFCEVKCDEDCDEKEAADKLHIKV 84
          S+CEVKCDEDCDEKE ADKLH++V
Sbjct: 61 SYCEVKCDEDCDEKEVADKLHVEV 84

BLAST of Cp4.1LG12g04550 vs. TrEMBL
Match: A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.8e-21
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQ 60
          MAKKM+AV L+C+VVV  LQ   A E     KYEAKF+AKY+ CYE CEKECL    NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKEAADKLHIKV 84
          SFCEVKCDEDC EKEAADKLHI++
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIEL 84

BLAST of Cp4.1LG12g04550 vs. TrEMBL
Match: A0A0A0KDP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.4e-21
Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKM+AV L+C+VVV +LQ ++A +  + A YEAKF+AKY+ C+  CEKEC+E+G+G S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCDEKEAADKLHI 82
          +CEVKCDEDC  KEAADKLHI
Sbjct: 61 YCEVKCDEDCGAKEAADKLHI 81

BLAST of Cp4.1LG12g04550 vs. NCBI nr
Match: gi|659114221|ref|XP_008456958.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-23
Identity = 57/83 (68.67%), Postives = 72/83 (86.75%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIA+ L+C+VVV ALQ +SA +  + AKYEAKF+AKY+ C++ CEKECLE G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKEAADKLHIKV 84
          +CEVKCDEDC+EKE ADKLHI++
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

BLAST of Cp4.1LG12g04550 vs. NCBI nr
Match: gi|700191315|gb|KGN46519.1| (hypothetical protein Csa_6G106710 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-22
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 1

Query: 3  KKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQSF 62
          KKM+ VLL+C+VV+ AL+ S      KE KYE+KF+AKY+ CYE CEKECLE G NGQSF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCDEKEAADKLHIKVKN 86
          CEVKCDEDC EKE+ADKLHI   N
Sbjct: 64 CEVKCDEDCGEKESADKLHINPAN 87

BLAST of Cp4.1LG12g04550 vs. NCBI nr
Match: gi|449457470|ref|XP_004146471.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 4.9e-22
Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MA KMIA+ L+C+VVV ALQ ++A +    AKYEAKF+AKY+ C+E CEKECL  G+GQS
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKE-DVAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 FCEVKCDEDCDEKEAADKLHIKV 84
          +CEVKCDEDCDEKEAADKLHI++
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIEL 82

BLAST of Cp4.1LG12g04550 vs. NCBI nr
Match: gi|700191282|gb|KGN46486.1| (hypothetical protein Csa_6G102480 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 8.3e-22
Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQ 60
          MAKKM+ VLL+C+V++  L+ S      KE KYE+KF+A+Y+ CYE CEKECL  G NGQ
Sbjct: 1  MAKKMMGVLLICIVIMAVLEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQ 60

Query: 61 SFCEVKCDEDCDEKEAADKLHIKV 84
          S+CEVKCDEDCDEKE ADKLH++V
Sbjct: 61 SYCEVKCDEDCDEKEVADKLHVEV 84

BLAST of Cp4.1LG12g04550 vs. NCBI nr
Match: gi|700191316|gb|KGN46520.1| (hypothetical protein Csa_6G106720 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 5.4e-21
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 1

Query: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQ 60
          MAKKM+AV L+C+VVV  LQ   A E     KYEAKF+AKY+ CYE CEKECL    NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKEAADKLHIKV 84
          SFCEVKCDEDC EKEAADKLHI++
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIEL 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ALL6_OLEEU6.8e-0853.06Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KCI6_CUCSA2.6e-2267.86Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1[more]
A0A0A0KPA7_CUCSA3.4e-2268.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1[more]
A0A0A0KFH6_CUCSA5.8e-2264.29Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1[more]
A0A0A0K9Z9_CUCSA3.8e-2167.86Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1[more]
A0A0A0KDP7_CUCSA8.4e-2164.20Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659114221|ref|XP_008456958.1|1.2e-2368.67PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo][more]
gi|700191315|gb|KGN46519.1|3.7e-2267.86hypothetical protein Csa_6G106710 [Cucumis sativus][more]
gi|449457470|ref|XP_004146471.1|4.9e-2268.67PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus][more]
gi|700191282|gb|KGN46486.1|8.3e-2264.29hypothetical protein Csa_6G102480 [Cucumis sativus][more]
gi|700191316|gb|KGN46520.1|5.4e-2167.86hypothetical protein Csa_6G106720 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015333Pollen_allergen_ole-e-6
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g04550.1Cp4.1LG12g04550.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015333Pollen allergen ole e 6GENE3DG3DSA:1.10.287.720coord: 39..81
score: 1.5
IPR015333Pollen allergen ole e 6PFAMPF09253Ole-e-6coord: 44..80
score: 5.3
IPR015333Pollen allergen ole e 6unknownSSF111388Pollen allergen ole e 6coord: 38..79
score: 1.96
NoneNo IPR availablePANTHERPTHR35632FAMILY NOT NAMEDcoord: 1..85
score: 4.5
NoneNo IPR availablePANTHERPTHR35632:SF1SUBFAMILY NOT NAMEDcoord: 1..85
score: 4.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g04550Csa6G106710Cucumber (Chinese Long) v2cpecuB152
Cp4.1LG12g04550CSPI06G08360Wild cucumber (PI 183967)cpecpiB154
Cp4.1LG12g04550CsaV3_6G008740Cucumber (Chinese Long) v3cpecucB0176
The following gene(s) are paralogous to this gene:

None