Cp4.1LG12g03420 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGCCGAGTCCGACCCGGGACAAGTAGTTCATGTGATTCCATTGAAAGCCCTAAACCTCGCGAGAGAGAAATCTTTGGATGGCTACGAGCAACAACCTCCATGGCTCTGGTACTCCTCTTCCTTCAATGTTTCCTTTTCGTGGTTTCATGAAGTGTTATGTGGTGTGGATTTTTCAGAATTGAGTAATCATTTATGAACAAGGAGGCACGTTTATTGATCTTCTCTTTTTTACTTCCTTTTAATTTCCTGTTTGCTGTCGTATTACCAGAAATGTATGATCGTGAACGGAATTCACATCCAGCAGGTTATTTAAGATAGACGATTTTTCTTGTTCCTAGTTGCGCTATAATTGTCTCTTTGAGTTGAACCTTCTATTGTTTGTTGAAGTCTAAGAAGCGTATTGAGGATTTCTAGTGTTGAGATAAAGTTATGAATTCTCTGTGTGCTCATAAACGAGGGGAGAAAAGTAGTTTAATTCTGTATGTTTGTCTTTTGGTATTGGTAAAAATTTTCGGAATTTCATTGAGTGGTTAAGTCTGCATAAGTTGGAGGCATCAAAGATTTGCGATACTTGGAGGTGGGTGCTCGAAATAACTTACCTTAACCCTCTTTTTGAAAACTTTTTTTCTTTTTATGTTTGCTATAATTGTATTCAGGCCTTCCGGATTATATAAACTATAATGTATAGTTTTGGTTTTTTTCTTCTTTCCCTAACTAGCTGCTTAAATTTCATAAGTACATCCTGTTTACTATCTTTTTTTTTACAATACCTTCTTATAAAGAGTTCCTTCAATTTTCAATGTTACATTAGTTAATTTCCAGACCTATAGGGATTTTTCGTTATTTCATGTTTTGACCTTCGAAATTATGTTTCGGTCTGTTCTGAGATGTGGAGTTTATATTTTGAAGATAATTTCTCTTATGAGTAAGATTATTTGAGTGAACGGAAGTCATTGTTCTCCTTGAAATATTGGAAAGAAGAGTCTTGCTGTTGATTGGCGCTTTATCATCTTTTGTTGTCTTCTGGTTATCTTTATTTGCTGGACCGTGTTAAGTGTTTAATTTCCATTAATACTTTGTACTCTTTATCTCACTTCATTATCAAAGCATTAGTTGATCCTCTTTTATCAAGTATTGATTCATGTATAGTAACACTAAATGCGAGGTTTGCAGCTTTTCCTATTTTTCCTCAGAAGGTTGACTTTTTTCATATTATATGTCAGATTCTGTGAATGAAATGCTAATGGAATCGGCTAAAGAAGGATCTGGTCATATGAGTTCAGAGGGAAAGCCCAATGACACAGGTGAGCATAGGAAGCGGACTATAAGTCGTTTATTGTTTTAGTTCTTTTCCTTGCTATACATATTTTTATTTGCATGTTAATTTGTTGATTAAGAGGTATAATGATATTCTTCTTTATTATGCTAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATGTAAAAAATCACATTCTGCTCTTTCATGATGAGGCAGCTCAAAATTTAGGAAAAATATCTCTTACTTTTTCTCTCTCCATCTTCCCCGTGTCTAGAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAAGAAAAAGATACATTATCTGAAGGACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCCGGCAGGGGGAAAGTTGAGGTGCCAATACTTTCATATCTATTTTTATCTGTTTTTCTACCCTTTTAGGCGTGTGATTATCTAGGCATTTGGTTTTCTATTGTTACGAGACATATAGAGCTGAAGATGGATTTATCTTTGTATGTCATTTCGTCGGTTGTTTGAATAATTGTTTAGAGAATTTCTTCGTTGTTGGTAATGAAGGAGAACTTCCTTCTGTAATGATGCATGGGTAGGTAAGAAACACCCTTTTACTTCCATCTCTCTCTCTTTCTCTTCCTCCCTCTCCTTCTCCCTCTCTGTCCTTTTTTGGTGATTTTTCTACCAAAAAATGTTTTGGTCTTCGATGCGTGGGAATAAGAAACTCATTCTTGGAGAATGGGTGTGAGAAGAAACTTACGGAAGGAGGAAAAGAGATTGGAGTTGTACTTGACTTGATTGATGAGATGAATCAAGGAAAGATAAAAGAGATTAAAAAGTGGATCTGTCTAGAACATTCTTGGTTAAATTTTTGGTGAAGCTTACTTTACTGAAGGGTAGAAACTTGCTAGAAACTGAAAATCCTTAAGAAGTAATTGTTTTGTTGTGTACTACAATTGGGTGGCATTAATACAACATATTAGTTGGTGAAAAGGTGTCCCCTGTTGCTTTTAGAAAAAAGAAAAAAAAAAAAAAAAAAGGGAANTTAAGCTTCCTACTGCATTTTTTGCATACAGGCAGGGAAGGATCAAACGTACTTGTCTTTCTACGCTCTTATGGCAGAAAACGTTGGGATAATTCTATGTATTTTGGTGTTTCATAGCGGTTGGAAAAATTCCCTAACGAGGGTAACATATATGATATAACCTTAACCTCGTAGTATAAAGCTCAAAGCCAAAGCTAAATTGTTATGGAGTGCCATTAGATCAATCATTGGGAGGATTTGATTTGAAAGAAATCAAATTAGGGAAGTTTTTAGAATTGGTGGAGAATGAATATTACAAAATATCAAGCCTCTTCTTGGTGTTGCCTGTCTATTGTACTTTGTAACCATACCTCCAATATAATTAAATTTTACTTCGGGGTTTTTCTTTATACAATGAGATTGGTTAGGCTTACATTTTCCTTTTGTAAGCTCTGATAATTGGGTGCTACTTTGTACTCTCCTAATATGACTACCTAGCCCGTCTATGGATAATTGTTGCGTGTTTCTTCTGGCATTTAGGACAACAATTGTTGTGGTATCCCCTTTTCTTTGGTTAATTACTAGTTTTGGTGGGTAGGAGAATCAAAAGGTACAAATCAAGATTTTACGACTTCATGGGTGAAGTTCGGTAAGTCGGGGCTTGGGTGGGATGTGTGGGAGAGTCCTCCAAGAAGTTGATGGTCCTGATATTTGATAACTGTTCTTGCTTTATGATATCATCTCTTATATTGATCGTCTTATGATATCATCTCTTATATAACCGTAAAACAGCAAGTTTTGCATTGTTTATATTGATTATCTGTTAGTTGATGAACACAAACCATTGTCCTTTTACTTTTAACAGATCACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAAGCACCTGCTAGTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGATTAATAAAACCATCAAGAGAAACAAGCTCTGTGGAGAATGTGCCGTAAGTATTAAGGTTGTTATTGAATTTCTTGTGCGTATCACTTCCAATAGGCAGTACAGTCGGCTCTGATGATTTGGAAGTTCATTGTGTGCCCATGGCGTATTCTGGTATCTGTCTGACAAAAACTGCAAATCATGCTTCGATGTAAATCTTGGTCTCCTACCATCAGAAAGATTTCTTGTAGCACTTATCTTTCATTCTTCTGTTGTGTACAGACAAATCTTGGAGCTACGGTTGTGTTACTCAACGGATTAAGGCATCTTTACCAATATGAGCATAGCTTAGCCGGTATAAAGTATGTGTTATCAACAAAAGGATCAAAGGTTTGAATTTTTATTTCTCATATTATTGAACTAAAGAAATGATATTTATTTACCATGCAAGGTAGGAGCTTGTAAAACTCCTGTTTAGAGGTAGAGATGTTTATTGAAGCTGTAGGATAGGGCTCGTAGAAACTCCGGTTAAAACGGAGAATGAGAATGAGGGAGGAAATGAAGAGAGATTTATCGTTGTTAGTTAGATAGGTCTTGTACTACCTTGATTGGAGGGCGGAGAATTAAAATAGATGGCAAGGATGAAGTGTTCTCTTAACTTGATCTTACATATTCTAAACATTTTCATCTCATCCTTTGCA GGGCCGAGTCCGACCCGGGACAAGTAGTTCATGTGATTCCATTGAAAGCCCTAAACCTCGCGAGAGAGAAATCTTTGGATGGCTACGAGCAACAACCTCCATGGCTCTGATTCTGTGAATGAAATGCTAATGGAATCGGCTAAAGAAGGATCTGGTCATATGAGTTCAGAGGGAAAGCCCAATGACACAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAAGAAAAAGATACATTATCTGAAGGACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCCGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAAGCACCTGCTAGTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGATTAATAAAACCATCAAGAGAAACAAGCTCTGTGGAGAATGTGCCGTAAGTATTAAGACAAATCTTGGAGCTACGGTTGTGTTACTCAACGGATTAAGGCATCTTTACCAATATGAGCATAGCTTAGCCGGTATAAAGTATGTGTTATCAACAAAAGGATCAAAGGTTTGAATTTTTATTTCTCATATTATTGAACTAAAGAAATGATATTTATTTACCATGCAAGGTAGGAGCTTGTAAAACTCCTGTTTAGAGGTAGAGATGTTTATTGAAGCTGTAGGATAGGGCTCGTAGAAACTCCGGTTAAAACGGAGAATGAGAATGAGGGAGGAAATGAAGAGAGATTTATCGTTGTTAGTTAGATAGGTCTTGTACTACCTTGATTGGAGGGCGGAGAATTAAAATAGATGGCAAGGATGAAGTGTTCTCTTAACTTGATCTTACATATTCTAAACATTTTCATCTCATCCTTTGCA ATGGCTACGAGCAACAACCTCCATGGCTCTGATTCTGTGAATGAAATGCTAATGGAATCGGCTAAAGAAGGATCTGGTCATATGAGTTCAGAGGGAAAGCCCAATGACACAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAAGAAAAAGATACATTATCTGAAGGACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCCGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAAGCACCTGCTAGTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGA MATSNNLHGSDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPASSAVDAILEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRPDMREEP
BLAST of Cp4.1LG12g03420 vs. Swiss-Prot
Match: CFDP1_CHICK (Craniofacial development protein 1 OS=Gallus gallus GN=CFDP1 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.3e-14 Identity = 53/131 (40.46%), Postives = 81/131 (61.83%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. Swiss-Prot
Match: CFDP1_HUMAN (Craniofacial development protein 1 OS=Homo sapiens GN=CFDP1 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.7e-13 Identity = 75/255 (29.41%), Postives = 119/255 (46.67%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. Swiss-Prot
Match: CFDP1_MOUSE (Craniofacial development protein 1 OS=Mus musculus GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12 Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. Swiss-Prot
Match: CFDP1_BOVIN (Craniofacial development protein 1 OS=Bos taurus GN=CFDP1 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12 Identity = 80/254 (31.50%), Postives = 118/254 (46.46%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. Swiss-Prot
Match: CFDP1_RAT (Craniofacial development protein 1 OS=Rattus norvegicus GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.7e-12 Identity = 62/198 (31.31%), Postives = 99/198 (50.00%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. TrEMBL
Match: A0A0A0K9U3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G00090 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 8.9e-122 Identity = 240/261 (91.95%), Postives = 251/261 (96.17%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. TrEMBL
Match: A0A059B5E6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04085 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79 Identity = 170/262 (64.89%), Postives = 204/262 (77.86%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. TrEMBL
Match: M5XC64_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009838mg PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 1.0e-77 Identity = 178/275 (64.73%), Postives = 207/275 (75.27%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. TrEMBL
Match: W9RWY2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026151 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 3.7e-75 Identity = 161/237 (67.93%), Postives = 189/237 (79.75%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. TrEMBL
Match: A0A151SCQ0_CAJCA (Craniofacial development protein 1 OS=Cajanus cajan GN=KK1_025544 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 6.2e-75 Identity = 162/252 (64.29%), Postives = 193/252 (76.59%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. TAIR10
Match: AT5G30490.1 (AT5G30490.1 Craniofacial development protein 1/Bucentaur (InterPro:IPR011421)) HSP 1 Score: 214.2 bits (544), Expect = 9.9e-56 Identity = 135/244 (55.33%), Postives = 177/244 (72.54%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. NCBI nr
Match: gi|449441514|ref|XP_004138527.1| (PREDICTED: craniofacial development protein 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 444.5 bits (1142), Expect = 1.3e-121 Identity = 240/261 (91.95%), Postives = 251/261 (96.17%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. NCBI nr
Match: gi|659116900|ref|XP_008458319.1| (PREDICTED: LOW QUALITY PROTEIN: craniofacial development protein 1 [Cucumis melo]) HSP 1 Score: 443.0 bits (1138), Expect = 3.7e-121 Identity = 238/261 (91.19%), Postives = 249/261 (95.40%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. NCBI nr
Match: gi|449441516|ref|XP_004138528.1| (PREDICTED: craniofacial development protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 428.3 bits (1100), Expect = 9.4e-117 Identity = 232/252 (92.06%), Postives = 242/252 (96.03%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. NCBI nr
Match: gi|1009163717|ref|XP_015900111.1| (PREDICTED: craniofacial development protein 1-like [Ziziphus jujuba]) HSP 1 Score: 305.4 bits (781), Expect = 9.2e-80 Identity = 176/265 (66.42%), Postives = 203/265 (76.60%), Query Frame = 1
BLAST of Cp4.1LG12g03420 vs. NCBI nr
Match: gi|702447130|ref|XP_010024829.1| (PREDICTED: craniofacial development protein 1 [Eucalyptus grandis]) HSP 1 Score: 302.8 bits (774), Expect = 6.0e-79 Identity = 170/262 (64.89%), Postives = 204/262 (77.86%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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