Carg05568 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATAGGGATTTTTCATTATTTCATGTTTTGACCTAATTAATTATGTTTTCGTTCTGTTCTGAGATGTGGAATTTATATTTTGAAGATAATTTCTCTTATGAGTAAGATTATTTGAGTGAACGAAAGTCATTGTTCTCCTTGAAATATTGGAAAGAAGAGTCTTGTTGTTGATTGGCGCTTTATCATCTTTTGTTCTCTTCTGGTTATCTTTATTTGCTGGACCGTGTTAAGTGTTTAATTTCCATTAATACTTTGTACTCTTTATCTCACTTCATTATCAAAGCATTAGTTGATCCTCTTTTATCAAGTATTGATTCATGTATAGTAACACTAAATGCGAGGTTTGCAGCTTTTCCTATTTTTCCTCAGAAGGTTGACTTTTTTCATATTATATGTCAGATTCTGTGAATGAAATGCTAATGGAAACGGCTAAAGAAGGATCTGATCATATGAGTTCAGAGGGAAAGCCCAATGACACAGGTGAGCATAGGAAGCGGACTATAAGTCGTATATTGTTTTAATTCTTTTCCTTGCTATACATTTTTTTATTTGCATGTTAATTTGTTGGTTAAGAGGTATAATGATATTCTTCTTTATTATGCTAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATGTAAAAAATCACATTCTGCTCTTTCATGATGAGGCAGCTCAAAATTTAGGAAAAATATCTCTTACTTTTTCTCTCTCCATCTTCCCCGTGTCTAGAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAACAAAAAAATACATTATCAGAAGAACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGGTGCCAATACTTTCATATCTATTTTTATCTGTTTTTGTACCCTTTTAGGCGTGTGATTATTTAGGCATTTGGTTTTCTATTGTTACAAGACATATAGAGCTGAAGATGGATTTATTTTTGTATGTCGTTTGGCCAGTTTGAATAATTGTTTAGATAATTTCTTCGTTGTCGGTAATGAAGGAGAACTTCCTTCTGTAATGATGCATGGGTAGGTAAGAAACACCCTTCTACTTCCATCTCTCTCTCTCTCTCTCTCTTCCTCCCTCTCCTTCTCCCCTGTCCTTTTTTTTGGTGATTTTTCTACCAAAAAATGTTTTGGTCTTTGATGCGTGGGAATAAGAAACTCATTCTTGGAGAATGGGTGTGAGAAGAAACTTACGGAAGGAGGAAAAGAGATTGCAGTTGTACTTGACTTGATTGATGAGATAAATCAAGGAAAGATAAAAAGAGATTAAAAAGTGGATCTGTCTAGAACATTCTTGGTTAAATTTTTGGTGAAGCTACTTTACTGAAGGGTAGAAACTTGCTAGAAACTGAAAATCCTTAAGAAGTAATTGTTTTGTTGTGGATACTACAATTGGGTGGCATTAATACCACATATTAGTTGGTTAAAAGGTGTCCCCTGTTGCTTTTAGGAAAAAAAAAAGAAGAAAAAGGGTCCTGTTGCCTTAAGCTTTCTACTGCATTTTTTGCATACAGGCAGGGAAGAATCAAACGTACTTGTCTGTCTTTCTACGCTCTTATGGCAGAAAACGTTGGGATAATTCTATGTATTTTGGTGTTTCATAGCGGTTGGAAAAGTTCCCTAACGAGGGTAACATATATGATATAACCTTAACCTCGTAGTATAAAGCTCAAAGCCAAAGCTAAATTGTTATGGAGTGCCATTAGATCAATCATTGGGAGGATTTGATTTGAAAGAAATCAAATTAGAGAAGTTTGTAGAATGGATGGGGAATGAATACTACAAAATATCAAGCCTCTTCTTGGTGTTGCCTGTCTATTGTACTTTGTAACCATACCTCCAATATAATTAAATTTTACTTCGGGGTTTTTCTTTATACAATGAGATTGGTTAGGCTTACATTTTCCTTTTGTAAGTTCTGATAATTGGGTGCTACTTTTTACTCTCCCAATAGGGAGTCTCAACTTCCCAAGTACCACCAGATAGTTGTTTACTGCTCAAAAAGTAAATATATTAATGACCCTGGTGTTAATTCTGAAAGTTTGGCTTGATTATATGACTACCTAGCTCGTCTATGGATAATCGTTGCGTGTTTCTTCTGGCATTTAGGACAATAATTGTTGTGGTATTTCCTTTTCTTTGGTTAATTACTAGTTTTGGTGGGTAGGAGAAAGAAAAGGTACGAATCAAGATTTTACGACTTCATGGGTGAAGTTCGGTAAGTCGGGGCTTGGGTGGGATGTATGGGAGAGTCCTCCAAGAGGTTGATGGTCCTGATGGTTGATAACTGTACTTGCTTTATGATATCATGTCTTATAAAACAGTAAAACAGCAAGTTTTGCATTGTTTATGTTGATGATCTGTTAGTTGAAGAACTCAAACCATTGTCCTTTTACTTTAACAGATTACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAGGCACCTGCTACTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGA TATAGGGATTTTTCATTATTTCATGTTTTGACCTAATTAATTATGTTTTCGTTCTGTTCTGAGATGTGGAATTTATATTTTGAAGATAATTTCTCTTATGAGTAAGATTATTTGAGTGAACGAAAGTCATTGTTCTCCTTGAAATATTGGAAAGAAGAGTCTTGTTGTTGATTGGCGCTTTATCATCTTTTGTTCTCTTCTGGTTATCTTTATTTGCTGGACCGTGTTAAGTGTTTAATTTCCATTAATACTTTGTACTCTTTATCTCACTTCATTATCAAAGCATTAGTTGATCCTCTTTTATCAAGTATTGATTCATGTATAGTAACACTAAATGCGAGGTTTGCAGCTTTTCCTATTTTTCCTCAGAAGGTTGACTTTTTTCATATTATATGTCAGATTCTGTGAATGAAATGCTAATGGAAACGGCTAAAGAAGGATCTGATCATATGAGTTCAGAGGGAAAGCCCAATGACACAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAACAAAAAAATACATTATCAGAAGAACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATTACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAGGCACCTGCTACTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGA ATGTCAGATTCTGTGAATGAAATGCTAATGGAAACGGCTAAAGAAGGATCTGATCATATGAGTTCAGAGGGAAAGCCCAATGACACAGAAATAAAAGCGCGTGTCGATGCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGTAAAACACTAAAAGGTTTGTCAACCAAACGAAGTCCAGTGGTGAATAAAAACTCAAAGAAACCATCCAATAATTGGATTGCATATCTAGGTATGGCGTCAAAGAAGATTGAACCTCAACAAAAAAATACATTATCAGAAGAACCCAAGGTTCTGCAGGACAGTTCTATGGATGATGCTAAGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATTACAGAGATTAGGGACTTCGCAGGCCAAAATGTTGAAATTAAGAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAGATGAAGGCACCTGCTACTTCAGCTGTTGATGCAATCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTCAAGGAAGAAACCAAGGGGTTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAGTATCTCGATAAAGTTTCGTTCTTGCAGCGAGCCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGGTTGGCTCTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGAGCCATGA MSDSVNEMLMETAKEGSDHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKPSNNWIAYLGMASKKIEPQQKNTLSEEPKVLQDSSMDDAKMLAATALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDAILEQIKKKQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRPDMREEP
BLAST of Carg05568 vs. NCBI nr
Match: XP_022959426.1 (craniofacial development protein 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 459.1 bits (1180), Expect = 9.4e-126 Identity = 247/252 (98.02%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Carg05568 vs. NCBI nr
Match: XP_023547915.1 (craniofacial development protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 457.6 bits (1176), Expect = 2.7e-125 Identity = 246/252 (97.62%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Carg05568 vs. NCBI nr
Match: XP_023547913.1 (craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547914.1 craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 456.4 bits (1173), Expect = 6.1e-125 Identity = 245/252 (97.22%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Carg05568 vs. NCBI nr
Match: XP_023006641.1 (craniofacial development protein 1 isoform X2 [Cucurbita maxima]) HSP 1 Score: 454.5 bits (1168), Expect = 2.3e-124 Identity = 244/252 (96.83%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Carg05568 vs. NCBI nr
Match: XP_023006639.1 (craniofacial development protein 1 isoform X1 [Cucurbita maxima] >XP_023006640.1 craniofacial development protein 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 453.4 bits (1165), Expect = 5.2e-124 Identity = 243/252 (96.43%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Carg05568 vs. TAIR10
Match: AT5G30490.1 (Craniofacial development protein 1/Bucentaur (InterPro:IPR011421)) HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48 Identity = 120/242 (49.59%), Postives = 161/242 (66.53%), Query Frame = 0
BLAST of Carg05568 vs. Swiss-Prot
Match: sp|Q75QI0|CFDP1_CHICK (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.1e-14 Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of Carg05568 vs. Swiss-Prot
Match: sp|Q75UQ2|CFDP1_RAT (Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13 Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 0
BLAST of Carg05568 vs. Swiss-Prot
Match: sp|Q8HXY9|CFDP1_BOVIN (Craniofacial development protein 1 OS=Bos taurus OX=9913 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12 Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 0
BLAST of Carg05568 vs. Swiss-Prot
Match: sp|Q4ADK7|CFDP1_CAMDR (Craniofacial development protein 1 OS=Camelus dromedarius OX=9838 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12 Identity = 55/135 (40.74%), Postives = 79/135 (58.52%), Query Frame = 0
BLAST of Carg05568 vs. Swiss-Prot
Match: sp|Q60FC2|CFDP1_TRAJA (Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12 Identity = 54/135 (40.00%), Postives = 79/135 (58.52%), Query Frame = 0
BLAST of Carg05568 vs. TrEMBL
Match: tr|A0A0A0K9U3|A0A0A0K9U3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G00090 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 1.4e-114 Identity = 229/252 (90.87%), Postives = 241/252 (95.63%), Query Frame = 0
BLAST of Carg05568 vs. TrEMBL
Match: tr|A0A1S3C8V1|A0A1S3C8V1_CUCME (LOW QUALITY PROTEIN: craniofacial development protein 1 OS=Cucumis melo OX=3656 GN=LOC103497769 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 4.2e-114 Identity = 227/252 (90.08%), Postives = 239/252 (94.84%), Query Frame = 0
BLAST of Carg05568 vs. TrEMBL
Match: tr|A0A2I4E4C8|A0A2I4E4C8_9ROSI (craniofacial development protein 1 OS=Juglans regia OX=51240 GN=LOC108986183 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 2.8e-78 Identity = 169/243 (69.55%), Postives = 193/243 (79.42%), Query Frame = 0
BLAST of Carg05568 vs. TrEMBL
Match: tr|A0A2I0K3H7|A0A2I0K3H7_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_016944 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.3e-75 Identity = 153/226 (67.70%), Postives = 185/226 (81.86%), Query Frame = 0
BLAST of Carg05568 vs. TrEMBL
Match: tr|W9RWY2|W9RWY2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026151 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.0e-75 Identity = 161/237 (67.93%), Postives = 190/237 (80.17%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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