Cp4.1LG12g01460 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g01460
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description40S ribosomal protein S15
LocationCp4.1LG12 : 987461 .. 989710 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTATTGAAGGCCCAAGTATGAAGCCCGTATTAACCATAGCTGGTTCCACTCGGCCTAGGGTTTCAGCCACTGGAATTGCAGCAAGTAACCAACATATATATACCGCTGAAAAACGGAGGCTAAAAACCCTGCAGATTCTGAAGCTTCATCGCGCCGATTAGCTCTACCTTCTCATCCCGGAGTTCCGAAAACGTAAACCATGGTATGTTCTCAACTCATTCTTCTCTTCGATTTATCCTTCATCTCTTCCAGTTTCTTTAATGGTGCTGCTTCGGTCTCCTTCAGGCGGATGTGGAAGCCGATGTTGCAGTGGCGGGGCAGCCAAAGAAGAGGACGTTCAAGAAGTTCAGCTTCCGAGGCGTCGATTTGGATTCTTTGCTGGACATGTCCACCGATGAGCTCGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTGCTACAACTGAATGTGTCATGAATTGATTTTTGTGTTCTTTTTCATTCTTAACTTGCTCGTTTTTCTAACATTCTTATGGTTTTTGGATAGGTTTCGTCGGGGTTTGACAAGGAAGCCAATGGCTCTTATCAAGAAGCTTCGTAAAGCGGTTAGTATCTTTTAGATCCATTTCTGCCTATTCAATATTGCAATTATTTACAACTTTGTATTGTTTTCTGATTCTCACTGGCGATGCTGTTTTCTGGAATGCAAATGGTGATGGACTCTTTCCTGTGTAGTATCTTAATCTTGCCATGGTTTAGGTTAAAGTTTTTCTTCAGTGTTCTTGATGAGTAGATAGGTGGGAAGAAAATGGTTTAATTAGGCCATTATACCTTAAATATATAGTTATATCAGATGAGATTTCCAACAATATGTTTAGACTATGAATCATTCCTTTTGAGGGCTGTTATTAGCTTATATTCTCAAGCCTCCCTGTATTTGCTTTAACCTTCAAATGAACAACAATGAACTAAAACTTTGGGAAAGTTTTCATTTTCCATAAGCTTTTGCCCCAAATCATCTAGTGGAGAATTTTGCCCCAAATCATCTAGTGGAGAATTTTGCCCTCATGATCAACAGTTTGGAATCAGTTTCATCACAAAGGAATGCACTCCCTCTTTTATTTCTGGTAACACACGCTGTTGTTCTGATAGTGTGGTATTCTTCATTATTAACATGAGTCTGACTTTAAGCCGACATGTTTTACCAACTTCCGTTGCTGCTTGCAATTCTCTCCCTTGTTTTTGCTTTTGGATTTCTCATATCCTGACATGGGAACTTACCCATTGCTGGATATGTAAGTTGATGTACCATGAGTCTCTGAATCTCGTCGTATACGGTTGTGTTAGTTCTTGCAGTTGTCCTGATTTTTCCATTGGATTTCTCATATCTTAACATGAAAACTCAAGATCATCCTTCAGTGGTAGATTTAGATTTGGAAGTGAATGTGTTATGAATCTCCAGAATTTATCATTTTGAACTTTTATATTTTCCATTTTTTTCCAACATGTTCTTGATAAGTTTCGATACACCGACGAAGTATATGTGAACTTGTCCTTCTTCCTTTTCCAAAAAACTGAAGAACAGTTAAGCTATTTTCTTTTGATGTCTCATCTCATTTATTTTTATTTATTTTTTAACTGTAATAGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAGCCCGTCCGAACACACCTTCGGAACATGATCATTGTGCCAGAGATGATTGGAAGCATCATTGGTGTTTACAACGGCAAAACCTTCAACCAAGTTGAAATCAAGCCAGAGATGATTGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCCGTCAAGCACGGTAGGCCCGGTATTGGTGCCACCCACTCTTCAAGGTTCATTCCTCTCAAGTGAAAATCAGTGTCGAGTTCTTGCTTAGTTTTGTTATATTATTACATGAAACTTGGATGTTGATCAGATTTTGTTCTTAGTTTCTGCCCATTTTCTATGCTTTATATAGCTGATTAGTACTATGGAGGCTTGAGCTATTTAGTTTTTTGAAGCTGTTGTTACTGTTAAAATTTTTATTCTACTTGTTTCATCTAAATGTAGACTTGGTTGTACCATTCAGTTTTACATGGTTGTTTGCTCAAATATGTCTCCGTTATTCGTTTAAGAACTCACCATTTAGACTCGAATCTGTTAGTTTAGACATATCTTCTCTGTTTTATTCATCGAAATCAACTGAGTCCTCTTTAATTTGAGAGCCTCTGCTATAATAATT

mRNA sequence

GCTTTATTGAAGGCCCAAGTATGAAGCCCGTATTAACCATAGCTGGTTCCACTCGGCCTAGGGTTTCAGCCACTGGAATTGCAGCAAGTAACCAACATATATATACCGCTGAAAAACGGAGGCTAAAAACCCTGCAGATTCTGAAGCTTCATCGCGCCGATTAGCTCTACCTTCTCATCCCGGAGTTCCGAAAACGTAAACCATGGCGGATGTGGAAGCCGATGTTGCAGTGGCGGGGCAGCCAAAGAAGAGGACGTTCAAGAAGTTCAGCTTCCGAGGCGTCGATTTGGATTCTTTGCTGGACATGTCCACCGATGAGCTCGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTTCGTCGGGGTTTGACAAGGAAGCCAATGGCTCTTATCAAGAAGCTTCGTAAAGCGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAGCCCGTCCGAACACACCTTCGGAACATGATCATTGTGCCAGAGATGATTGGAAGCATCATTGGTGTTTACAACGGCAAAACCTTCAACCAAGTTGAAATCAAGCCAGAGATGATTGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCCGTCAAGCACGGTAGGCCCGGTATTGGTGCCACCCACTCTTCAAGGTTCATTCCTCTCAAGTGAAAATCAGTGTCGAGTTCTTGCTTAGTTTTGTTATATTATTACATGAAACTTGGATGTTGATCAGATTTTGTTCTTAGTTTCTGCCCATTTTCTATGCTTTATATAGCTGATTAGTACTATGGAGGCTTGAGCTATTTAGTTTTTTGAAGCTGTTGTTACTGTTAAAATTTTTATTCTACTTGTTTCATCTAAATGTAGACTTGGTTGTACCATTCAGTTTTACATGGTTGTTTGCTCAAATATGTCTCCGTTATTCGTTTAAGAACTCACCATTTAGACTCGAATCTGTTAGTTTAGACATATCTTCTCTGTTTTATTCATCGAAATCAACTGAGTCCTCTTTAATTTGAGAGCCTCTGCTATAATAATT

Coding sequence (CDS)

ATGGCGGATGTGGAAGCCGATGTTGCAGTGGCGGGGCAGCCAAAGAAGAGGACGTTCAAGAAGTTCAGCTTCCGAGGCGTCGATTTGGATTCTTTGCTGGACATGTCCACCGATGAGCTCGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTTCGTCGGGGTTTGACAAGGAAGCCAATGGCTCTTATCAAGAAGCTTCGTAAAGCGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAGCCCGTCCGAACACACCTTCGGAACATGATCATTGTGCCAGAGATGATTGGAAGCATCATTGGTGTTTACAACGGCAAAACCTTCAACCAAGTTGAAATCAAGCCAGAGATGATTGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCCGTCAAGCACGGTAGGCCCGGTATTGGTGCCACCCACTCTTCAAGGTTCATTCCTCTCAAGTGA

Protein sequence

MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Homology
[Close]
BLAST of Cp4.1LG12g01460 vs. Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-74
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLD+LLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-74
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLD+LLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 8.3e-73
Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 1 

Query: 1   MADVEADVAVAG-QPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADV   V V G QPKKRTF+KFS+RGVDLD LLDM TDELVKLF ARARRRF+RGL RK
Sbjct: 1   MADVSDAVDVGGAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKR+APPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

[Close]
BLAST of Cp4.1LG12g01460 vs. Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-71
Identity = 131/150 (87.33%), Postives = 143/150 (95.33%), Query Frame = 1 

Query: 3   DVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKPMA 62
           +VE +VA   QPKKRTF+K+S+RGVDLD+LLDMSTD+LV+LF ARARRRF+RGL RKPMA
Sbjct: 5   EVETEVAAGAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMA 64

Query: 63  LIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 122
           LIKKLRKAK++AP GEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHY
Sbjct: 65  LIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHY 124

Query: 123 LAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           LAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 125 LAEFSISYKPVKHGRPGIGATHSSRFIPLK 154

[Close]
BLAST of Cp4.1LG12g01460 vs. Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-71
Identity = 135/152 (88.82%), Postives = 143/152 (94.08%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MAD + DV    QPKKRTFKKFS+RGVDLD+LLDM+++ELVKLF ARARRRF+RGL R+P
Sbjct: 1   MADADVDVGPV-QPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151

[Close]
BLAST of Cp4.1LG12g01460 vs. TrEMBL
Match: A0A0A0LLK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193310 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.9e-77
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 1 

Query: 1   MADVEADVAVAGQ-PKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADV VAGQ PKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

[Close]
BLAST of Cp4.1LG12g01460 vs. TrEMBL
Match: A0A151T3B5_CAJCA (40S ribosomal protein S15 (Fragment) OS=Cajanus cajan GN=KK1_016028 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.3e-76
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1 

Query: 2   ADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKPM 61
           ADVE DVA  GQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLF+ARARRRF+RGLTRKPM
Sbjct: 1   ADVEVDVAAGGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPM 60

Query: 62  ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 121
           ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH
Sbjct: 61  ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 120

Query: 122 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           YLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151

[Close]
BLAST of Cp4.1LG12g01460 vs. TrEMBL
Match: B9S4T9_RICCO (40S ribosomal protein S15, putative OS=Ricinus communis GN=RCOM_0992390 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.6e-76
Identity = 144/152 (94.74%), Postives = 148/152 (97.37%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADV+ DVA  GQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MADVDGDVAAPGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. TrEMBL
Match: A9P8I7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24120g PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.6e-76
Identity = 145/152 (95.39%), Postives = 148/152 (97.37%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVA AGQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLF ARARRRF+RGL RKP
Sbjct: 1   MADVEADVAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFPARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMI 
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIS 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. TrEMBL
Match: W9RI49_9ROSA (40S ribosomal protein S15 OS=Morus notabilis GN=L484_024561 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 7.3e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VAV+G PKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MADVETEVAVSGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. TAIR10
Match: AT1G04270.1 (AT1G04270.1 cytosolic ribosomal protein S15)

HSP 1 Score: 280.4 bits (716), Expect = 6.5e-76
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLD+LLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. TAIR10
Match: AT5G09510.1 (AT5G09510.1 Ribosomal protein S19 family protein)

HSP 1 Score: 280.4 bits (716), Expect = 6.5e-76
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLD+LLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. TAIR10
Match: AT5G09500.1 (AT5G09500.1 Ribosomal protein S19 family protein)

HSP 1 Score: 258.8 bits (660), Expect = 2.0e-69
Identity = 133/152 (87.50%), Postives = 139/152 (91.45%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MAD E  VA AG  KKRTFKKFSFRGVDLD+LLDMSTD+LVKLF +R RRRF RGLTRKP
Sbjct: 1   MADPE--VAAAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAK EAP GEKP  VRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150

[Close]
BLAST of Cp4.1LG12g01460 vs. TAIR10
Match: AT5G09490.1 (AT5G09490.1 Ribosomal protein S19 family protein)

HSP 1 Score: 253.4 bits (646), Expect = 8.6e-68
Identity = 124/152 (81.58%), Postives = 138/152 (90.79%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MA+VE DV+ A   KKRTFKKFSF+GVDLD+LLDM TD+LV+LF +R RRR  RGLTRKP
Sbjct: 1   MAEVEPDVSAAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAK +AP GEKPE VRTHLRNM+I+PEMIGSIIGVYNGKTFNQ+EIKPEMIG
Sbjct: 61  MALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSI+YKPV+HG+PG GATHSSRFIPLK
Sbjct: 121 HYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. TAIR10
Match: AT5G43640.1 (AT5G43640.1 Ribosomal protein S19 family protein)

HSP 1 Score: 253.4 bits (646), Expect = 8.6e-68
Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 1 

Query: 4   VEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKPMAL 63
           +E +V  AG  KKRTFKKFSFRGVDLD+LLDMS ++LVK F++R RRRF RGLTRKPMAL
Sbjct: 1   MEPEVVAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMAL 60

Query: 64  IKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 123
           IKKLRKAK EAP GEKP  VRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL
Sbjct: 61  IKKLRKAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 120

Query: 124 AEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           AEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 121 AEFSISYKPVKHGRPGVGATNSSRFIPLK 149

[Close]
BLAST of Cp4.1LG12g01460 vs. NCBI nr
Match: gi|702432250|ref|XP_010069156.1| (PREDICTED: 40S ribosomal protein S15-4-like [Eucalyptus grandis])

HSP 1 Score: 296.6 bits (758), Expect = 2.5e-77
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MA+VEADVAVAGQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MAEVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. NCBI nr
Match: gi|449465374|ref|XP_004150403.1| (PREDICTED: 40S ribosomal protein S15-4-like [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 5.6e-77
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 1 

Query: 1   MADVEADVAVAGQ-PKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADV VAGQ PKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

[Close]
BLAST of Cp4.1LG12g01460 vs. NCBI nr
Match: gi|951001821|ref|XP_014507185.1| (PREDICTED: 40S ribosomal protein S15-4 [Vigna radiata var. radiata])

HSP 1 Score: 292.7 bits (748), Expect = 3.6e-76
Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE DVA AGQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLF+ARARRRF+RGLTRKP
Sbjct: 1   MADVEVDVAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]
BLAST of Cp4.1LG12g01460 vs. NCBI nr
Match: gi|1012350345|gb|KYP61534.1| (40S ribosomal protein S15, partial [Cajanus cajan])

HSP 1 Score: 292.0 bits (746), Expect = 6.2e-76
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1 

Query: 2   ADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKPM 61
           ADVE DVA  GQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLF+ARARRRF+RGLTRKPM
Sbjct: 1   ADVEVDVAAGGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPM 60

Query: 62  ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 121
           ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH
Sbjct: 61  ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 120

Query: 122 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           YLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151

[Close]
BLAST of Cp4.1LG12g01460 vs. NCBI nr
Match: gi|255559955|ref|XP_002520996.1| (PREDICTED: 40S ribosomal protein S15-4 [Ricinus communis])

HSP 1 Score: 291.6 bits (745), Expect = 8.0e-76
Identity = 144/152 (94.74%), Postives = 148/152 (97.37%), Query Frame = 1 

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADV+ DVA  GQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MADVDGDVAAPGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g01460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS151_ARATH1.2e-7490.7940S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=2 SV=1[more]
RS154_ARATH1.2e-7490.7940S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1[more]
RS15_ELAOL8.3e-7390.8540S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1[more]
RS15_ORYSJ1.2e-7187.3340S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2[more]
RS15_PICMA3.5e-7188.8240S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1[more]
BLAST of Cp4.1LG12g01460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLK6_CUCSA3.9e-7798.04Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193310 PE=3 SV=1[more]
A0A151T3B5_CAJCA4.3e-7696.0340S ribosomal protein S15 (Fragment) OS=Cajanus cajan GN=KK1_016028 PE=3 SV=1[more]
B9S4T9_RICCO5.6e-7694.7440S ribosomal protein S15, putative OS=Ricinus communis GN=RCOM_0992390 PE=3 SV=... [more]
A9P8I7_POPTR5.6e-7695.39Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24120g PE=2 SV=1[more]
W9RI49_9ROSA7.3e-7695.3940S ribosomal protein S15 OS=Morus notabilis GN=L484_024561 PE=3 SV=1[more]
BLAST of Cp4.1LG12g01460 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04270.16.5e-7690.79 cytosolic ribosomal protein S15[more]
AT5G09510.16.5e-7690.79 Ribosomal protein S19 family protein[more]
AT5G09500.12.0e-6987.50 Ribosomal protein S19 family protein[more]
AT5G09490.18.6e-6881.58 Ribosomal protein S19 family protein[more]
AT5G43640.18.6e-6885.23 Ribosomal protein S19 family protein[more]
BLAST of Cp4.1LG12g01460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|702432250|ref|XP_010069156.1|2.5e-7797.37PREDICTED: 40S ribosomal protein S15-4-like [Eucalyptus grandis][more]
gi|449465374|ref|XP_004150403.1|5.6e-7798.04PREDICTED: 40S ribosomal protein S15-4-like [Cucumis sativus][more]
gi|951001821|ref|XP_014507185.1|3.6e-7696.05PREDICTED: 40S ribosomal protein S15-4 [Vigna radiata var. radiata][more]
gi|1012350345|gb|KYP61534.1|6.2e-7696.0340S ribosomal protein S15, partial [Cajanus cajan][more]
gi|255559955|ref|XP_002520996.1|8.0e-7694.74PREDICTED: 40S ribosomal protein S15-4 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR023575Ribosomal_S19_SF
IPR020934Ribosomal_S19_CS
IPR005713Ribosomal_S19A/S15e
IPR002222Ribosomal_S19
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0000028 ribosomal small subunit assembly
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g01460.1Cp4.1LG12g01460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 105..117
score: 7.2E-13coord: 117..132
score: 7.2E-13coord: 85..104
score: 7.2
IPR002222Ribosomal protein S19/S15HAMAPMF_00531Ribosomal_S19coord: 48..141
score: 21
IPR002222Ribosomal protein S19/S15PIRPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 7..152
score: 2.6
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 2..152
score: 8.2E
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 54..135
score: 2.9
IPR005713Ribosomal protein S19A/S15eTIGRFAMsTIGR01025TIGR01025coord: 19..152
score: 5.7
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 105..129
scor
IPR023575Ribosomal protein S19, superfamilyGENE3DG3DSA:3.30.860.10coord: 53..145
score: 1.4
IPR023575Ribosomal protein S19, superfamilyunknownSSF54570Ribosomal protein S19coord: 55..136
score: 8.63
NoneNo IPR availableunknownCoilCoilcoord: 149..152
scor
NoneNo IPR availablePANTHERPTHR11880:SF1040S RIBOSOMAL PROTEIN S15-6coord: 2..152
score: 8.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g01460Cucsa.254920Cucumber (Gy14) v1cgycpeB0672
Cp4.1LG12g01460Cucsa.383840Cucumber (Gy14) v1cgycpeB1007
Cp4.1LG12g01460CmaCh17G001780Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g01460CmaCh08G011050Cucurbita maxima (Rimu)cmacpeB895
Cp4.1LG12g01460CmoCh17G001750Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g01460CmoCh08G010770Cucurbita moschata (Rifu)cmocpeB833
Cp4.1LG12g01460Cla007560Watermelon (97103) v1cpewmB161
Cp4.1LG12g01460Cla021565Watermelon (97103) v1cpewmB151
Cp4.1LG12g01460Csa2G193310Cucumber (Chinese Long) v2cpecuB127
Cp4.1LG12g01460Csa3G143520Cucumber (Chinese Long) v2cpecuB133
Cp4.1LG12g01460MELO3C006471Melon (DHL92) v3.5.1cpemeB142
Cp4.1LG12g01460MELO3C026780Melon (DHL92) v3.5.1cpemeB137
Cp4.1LG12g01460ClCG05G004620Watermelon (Charleston Gray)cpewcgB138
Cp4.1LG12g01460ClCG06G006730Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g01460CSPI03G12480Wild cucumber (PI 183967)cpecpiB134
Cp4.1LG12g01460CSPI02G10640Wild cucumber (PI 183967)cpecpiB126
Cp4.1LG12g01460Lsi05G016710Bottle gourd (USVL1VR-Ls)cpelsiB121
Cp4.1LG12g01460MELO3C026780.2Melon (DHL92) v3.6.1cpemedB166
Cp4.1LG12g01460MELO3C006471.2Melon (DHL92) v3.6.1cpemedB170
Cp4.1LG12g01460CsaV3_3G012600Cucumber (Chinese Long) v3cpecucB0153
Cp4.1LG12g01460CsaV3_2G013050Cucumber (Chinese Long) v3cpecucB0145
Cp4.1LG12g01460CsGy2G010640Cucumber (Gy14) v2cgybcpeB175
Cp4.1LG12g01460CsGy3G012610Cucumber (Gy14) v2cgybcpeB302
Cp4.1LG12g01460Carg10071Silver-seed gourdcarcpeB0322
Cp4.1LG12g01460Carg16587Silver-seed gourdcarcpeB0331
Cp4.1LG12g01460Carg06195Silver-seed gourdcarcpeB1328
Cp4.1LG12g01460Carg10944Silver-seed gourdcarcpeB1501
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g01460Cp4.1LG17g01900Cucurbita pepo (Zucchini)cpecpeB169
Cp4.1LG12g01460Cp4.1LG03g10240Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG12g01460Cp4.1LG08g03690Cucurbita pepo (Zucchini)cpecpeB194
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g01460Cucurbita pepo (Zucchini)cpecpeB189
Cp4.1LG12g01460Cucurbita maxima (Rimu)cmacpeB259
Cp4.1LG12g01460Cucurbita maxima (Rimu)cmacpeB519
Cp4.1LG12g01460Cucurbita maxima (Rimu)cmacpeB600
Cp4.1LG12g01460Cucurbita maxima (Rimu)cmacpeB810
Cp4.1LG12g01460Cucurbita moschata (Rifu)cmocpeB223
Cp4.1LG12g01460Cucurbita moschata (Rifu)cmocpeB549
Cp4.1LG12g01460Cucurbita moschata (Rifu)cmocpeB765
Cp4.1LG12g01460Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g01460Silver-seed gourdcarcpeB1087
Cp4.1LG12g01460Cucumber (Chinese Long) v3cpecucB0152
Cp4.1LG12g01460Wax gourdcpewgoB0172
Cp4.1LG12g01460Wax gourdcpewgoB0189