Cp4.1LG08g03690 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTGCAGTCCAGGGCTTTACAGTTTATATATGATCTTAATCGGCAAATTTACTCCACTGAAAACCCTAGCAGCCACAATCCTCAGTTGCACTCAGCCTAGGGCTTCTGATTTCTGAACTCCAACCATGGTAAGGCTCGAAGAATTTTTCGCATTCTGGTTTGACGTTTGTTTACTTCATCTAACCTAGATTTCGTGTTCGTAGGCGGACGATAATCCCGATGTCGCGGCGGCCGGAGGAGTGCCGAAGAAGAGGACGTTCAAGAAGTTCAGTTTCCGTGGAGTCGATTTGGATGCTCTCCTCGACATGTCCACCGACGAGCTCGTCAAGCTCTTCACTGCTAGGGCTCGCAGAAGGTAGTTCAAATGATAAATGTAATTGGAATGATTTATTTGCTGATTTTTACTCTTCCTCTCCGTTTTCTGTTTTAGGTTCCGGAGGGGTCTGACTAGAAAGCCAATGGCTTTGATCAAGAAGCTTCGCAAAGCGGTAATTGCTCCCCTTCCTATTTATGTTCCATTTTGTAACTGGAAAAGTTTATTTCATTTGCTTAAATCTGCTACCTGTACGTGCGTGTCTAATTCATTGGTAGTATGCTAGATAGAAAAATACAAGTCCACCTTAATGTACCGTGCTATTATCAAATCCGCGGGTTGTATGCTTTTCTTGGTTGTTATAAGGTGGTTTTGGGAAAGAAATTCGGTGGTTTTCCTGAAACTGCTTTTAACTTGAGGTAAACGAGATCACTTAGATGGATATCGTTCGGAGTACTACTAATTCCCCGACTTTTGTGAAAGTGTGGTGCTTTGTTTGATTTGGTTGCCTCCCTAAGTATTGTTCTGCCACAGGGTTCGCTTGATTCAATTTGGAATCTGTATTGAAACCGAAAGACACCCACCTACATAATTCTTGATGCTCCAAGAATCTGAGCGTAGGCAGAACCTCTCCCAATTATGACTAATTTGCATTTTCCCCATTGGCCTTAAGAGTCTTGTGTTCAGATAAATTTACCTCTCATCTGTCTTCTATGATCGAATGTTACTGCTTACTAGTGACGTTTCATGGGTGAATGGTGGCTTGGAGAATGTGATATCAATCTCACATGTTCTTTCCCCTTTTATGTACAGAAACGTGAGGCACCACCGGGTGAGAAGCCAGAACCTGTTAGAACTCACCTTCGTAATATGATCATAGTACCTGAAATGATTGGAAGCATCATTGGAGTTTACAATGGGAAGACCTTCAACCAGGTTGAAATCAAGCCTGAGATGATCGGCCATTACCTAGCTGAGTTTTCCATATCATACAAGCCTGTTAAGCACGGTAGACCTGGTATTGGTGCTACTCACTCATCCAGGTTCATTCCTCTGAAGTGAAGAGAGATTACCATTTGTTGGTCTGGGAGCATACTCTCCATCTCGTCAAGTTTTATGGATATTTATTTTTTGCTGTATTAGTCTATTTTTGGCTACTTTTTGACCGGGATTTAATTTCTATAAACAGTGAAAGATGATTTTGATGGTTCAGAGACATGTTCTAGTTGTTTAACTAAGAATGCCTAAGCTGTGCATGTGATGCCTGTGTGTGTGTTCTTTAAGGTTCTTTCGATTTGTTTTATTTGACTGGAGAATGTTTCTTATATTGGGATCAGATCAAATAGCTATTATTCAAATGCCTATC AATTGCAGTCCAGGGCTTTACAGTTTATATATGATCTTAATCGGCAAATTTACTCCACTGAAAACCCTAGCAGCCACAATCCTCAGTTGCACTCAGCCTAGGGCTTCTGATTTCTGAACTCCAACCATGGCGGACGATAATCCCGATGTCGCGGCGGCCGGAGGAGTGCCGAAGAAGAGGACGTTCAAGAAGTTCAGTTTCCGTGGAGTCGATTTGGATGCTCTCCTCGACATGTCCACCGACGAGCTCGTCAAGCTCTTCACTGCTAGGGCTCGCAGAAGGTTCCGGAGGGGTCTGACTAGAAAGCCAATGGCTTTGATCAAGAAGCTTCGCAAAGCGAAACGTGAGGCACCACCGGGTGAGAAGCCAGAACCTGTTAGAACTCACCTTCGTAATATGATCATAGTACCTGAAATGATTGGAAGCATCATTGGAGTTTACAATGGGAAGACCTTCAACCAGGTTGAAATCAAGCCTGAGATGATCGGCCATTACCTAGCTGAGTTTTCCATATCATACAAGCCTGTTAAGCACGGTAGACCTGGTATTGGTGCTACTCACTCATCCAGGTTCATTCCTCTGAAGTGAAGAGAGATTACCATTTGTTGGTCTGGGAGCATACTCTCCATCTCGTCAAGTTTTATGGATATTTATTTTTTGCTGTATTAGTCTATTTTTGGCTACTTTTTGACCGGGATTTAATTTCTATAAACAGTGAAAGATGATTTTGATGGTTCAGAGACATGTTCTAGTTGTTTAACTAAGAATGCCTAAGCTGTGCATGTGATGCCTGTGTGTGTGTTCTTTAAGGTTCTTTCGATTTGTTTTATTTGACTGGAGAATGTTTCTTATATTGGGATCAGATCAAATAGCTATTATTCAAATGCCTATC ATGGCGGACGATAATCCCGATGTCGCGGCGGCCGGAGGAGTGCCGAAGAAGAGGACGTTCAAGAAGTTCAGTTTCCGTGGAGTCGATTTGGATGCTCTCCTCGACATGTCCACCGACGAGCTCGTCAAGCTCTTCACTGCTAGGGCTCGCAGAAGGTTCCGGAGGGGTCTGACTAGAAAGCCAATGGCTTTGATCAAGAAGCTTCGCAAAGCGAAACGTGAGGCACCACCGGGTGAGAAGCCAGAACCTGTTAGAACTCACCTTCGTAATATGATCATAGTACCTGAAATGATTGGAAGCATCATTGGAGTTTACAATGGGAAGACCTTCAACCAGGTTGAAATCAAGCCTGAGATGATCGGCCATTACCTAGCTGAGTTTTCCATATCATACAAGCCTGTTAAGCACGGTAGACCTGGTATTGGTGCTACTCACTCATCCAGGTTCATTCCTCTGAAGTGA MADDNPDVAAAGGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
BLAST of Cp4.1LG08g03690 vs. Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=2 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 2.6e-74 Identity = 140/153 (91.50%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 2.6e-74 Identity = 140/153 (91.50%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 3.2e-72 Identity = 136/153 (88.89%), Postives = 141/153 (92.16%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2) HSP 1 Score: 265.8 bits (678), Expect = 3.0e-70 Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 3.9e-70 Identity = 135/153 (88.24%), Postives = 142/153 (92.81%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TrEMBL
Match: I3SMI9_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 4.3e-76 Identity = 147/153 (96.08%), Postives = 149/153 (97.39%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TrEMBL
Match: A0A0A0LLK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193310 PE=3 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 2.1e-75 Identity = 146/153 (95.42%), Postives = 146/153 (95.42%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TrEMBL
Match: A0A0L9T8D9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan325s002000 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-74 Identity = 145/153 (94.77%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TrEMBL
Match: A0A0S3QWK2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G016500 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-74 Identity = 145/153 (94.77%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TrEMBL
Match: I3T4G8_MEDTR (40S ribosomal protein S15-4 OS=Medicago truncatula GN=MTR_1g070450 PE=2 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 1.4e-74 Identity = 145/153 (94.77%), Postives = 149/153 (97.39%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TAIR10
Match: AT1G04270.1 (AT1G04270.1 cytosolic ribosomal protein S15) HSP 1 Score: 279.3 bits (713), Expect = 1.5e-75 Identity = 140/153 (91.50%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TAIR10
Match: AT5G09510.1 (AT5G09510.1 Ribosomal protein S19 family protein) HSP 1 Score: 279.3 bits (713), Expect = 1.5e-75 Identity = 140/153 (91.50%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TAIR10
Match: AT5G09500.1 (AT5G09500.1 Ribosomal protein S19 family protein) HSP 1 Score: 261.5 bits (667), Expect = 3.2e-70 Identity = 135/153 (88.24%), Postives = 142/153 (92.81%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TAIR10
Match: AT5G43640.1 (AT5G43640.1 Ribosomal protein S19 family protein) HSP 1 Score: 254.6 bits (649), Expect = 3.9e-68 Identity = 129/148 (87.16%), Postives = 137/148 (92.57%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. TAIR10
Match: AT5G09490.1 (AT5G09490.1 Ribosomal protein S19 family protein) HSP 1 Score: 251.1 bits (640), Expect = 4.3e-67 Identity = 125/153 (81.70%), Postives = 139/153 (90.85%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. NCBI nr
Match: gi|659076252|ref|XP_008438580.1| (PREDICTED: 40S ribosomal protein S15-4 [Cucumis melo]) HSP 1 Score: 305.1 bits (780), Expect = 7.1e-80 Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. NCBI nr
Match: gi|449432622|ref|XP_004134098.1| (PREDICTED: 40S ribosomal protein S15-4 [Cucumis sativus]) HSP 1 Score: 300.4 bits (768), Expect = 1.7e-78 Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. NCBI nr
Match: gi|388506830|gb|AFK41481.1| (unknown [Lotus japonicus]) HSP 1 Score: 292.0 bits (746), Expect = 6.2e-76 Identity = 147/153 (96.08%), Postives = 149/153 (97.39%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. NCBI nr
Match: gi|1009117659|ref|XP_015875436.1| (PREDICTED: 40S ribosomal protein S15-4-like [Ziziphus jujuba]) HSP 1 Score: 289.7 bits (740), Expect = 3.1e-75 Identity = 145/153 (94.77%), Postives = 147/153 (96.08%), Query Frame = 1
BLAST of Cp4.1LG08g03690 vs. NCBI nr
Match: gi|449465374|ref|XP_004150403.1| (PREDICTED: 40S ribosomal protein S15-4-like [Cucumis sativus]) HSP 1 Score: 289.7 bits (740), Expect = 3.1e-75 Identity = 146/153 (95.42%), Postives = 146/153 (95.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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