CmaCh17G001780 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGATTGTGAAGCTTCATCGCGCCGATTAGCTCTACCTTCTCATCCCGGAGTTCCGACAACGTAAACCATGGTATGTTCTCAACTCATTCTTCTCTTCGATTTATCGTTCATCTCTTTCAGTTTCTTTGATGGCGTTGCCTCGGTCTCCTTTAGGCGGATGTGGAAGCCGATGTTGCAGTGGCGGGGCAGCCAAAGAAGAGGACGTTCAAGAAGTTCAGCTTCCGAGGCGTCGATTTGGATTCTTTGCTGGACATGTCTACCGATGAGCTGGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTGCTACAACTGAATGTGTCATGAATTGATTTTTGTGTTCTTTTTCGTTCTTAACGTACACGTTTTTCTAACATTCTTATGGTTTTTGGATAGGTTTCGTCGGGGTTTGACAAGGAAGCCAATGGCTCTTATCAAGAAGCTTCGTAAAGCGGTTAGTATCTTTTAGATCCATTTCTGCCTATTCAATATTGCAATTATTTTACAACTTTGTATTGTTTTCTGATTCTCACTGGCGATGCTGTTTTCTGGAATGCAAATGGTGATGGACTCTTTCCTGTGTAGTATCTTAATCTTGCCATGGTTTAGGTTAAATTTTTCTTCAGTGTTCTTGATGAGTAGATAGGTGGAAAGAAAATGATTTAATTAGGCCATTATACCTTAAATATATAGTTTTATCAGATGAGAATTCCAACAATATGTTTAGACTATGAATCAATCCTTTTGAGGGCTGTTATTAACTTATATTCTCAAGCTTCCCTGTAATTTGCTTTAACCTTCAAATGAACAACAATGAACTGAAACTTTGGGAAAGTTTTCATTTTCCATAAGCTTTTGCCCCAAATCATCTAGTGGGAAATTTTGCCCTCATGATCAACAGTTTTGAATCAGTTTCATCACAAAGGAATGCACTCCCACTTTTATTTCTGAAAACACACGCTGTTGTCCTGATAGTGTGGTATTCTTCATTATTAACACGAGTCTGACTTCAAGCCGACATGTTTTACCAACTTACGTTGCTGCTTGCAATTCTCTCCCTTGTTTTTGCTATTGGATTTCTCGTATCCTTACATGGGAACTTACCCATTGTTGGATATGTAAGTTGATGTACCATGAATCTCCGAATCTCGTCCTATACGGTTGTGTTAGTTCTTGCAGTTGTTCTGACTTTTCCATTGGATTTCTCATATCTTAACATGAAAACTCAAGATCATCCTTCAGTGGTAGATTTAGATTTGGAAGTGAATATATTTTGAATCTCCAAAATTTATCATTTCATTTTGAACTTTTATATTTTCCATTTTATATCTTCAGTGGTAGATTTATATGTGAACGTATCCTTCTTCTCTGGATACCTCTTCCTTTTCCAAAAAACAGAAGAACAGTTGAGCTATTTTCTTTTGATGTCTCATCTCATCTATTTATTTATTTTTAAACTGAAATAGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAGCCCGTCCGAACACACCTTCGGAACATGATCATTGTGCCAGAGATGATTGGAAGCATCATTGGAGTTTACAACGGCAAAACATTCAACCAAGTTGAAATCAAGCCAGAGATGATTGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCCGTCAAGCACGGTAGGCCCGGTATTGGTGCCACCCACTCTTCAAGATTCATTCCTCTCAAGTGAAAATCAGTGTCGAGTTCTTGCTTGCTTAGTTTTGTTATATTATTACATGAAACTTGGATGTTTATCAGATTTTGTTCCTAGTTTTTGCCCATTTTCTATGCTTTATATAAGCTGATTAGTACTATGGAGGCTTGAGCTATTTAGTTTTTTGAAGCTGTTGTTACTGTTAAAATTTTTATTCTACTTGTCTCATCTAAATGTAGACTTGGTTGTACCTTTCAGTTTTACGTGGTTGTTTGCTCAAATATGTCTCGTTATATTTCATATCTATGGTCTAGATATATGTCCAGATTCGAATCTGTTAGTTTGAACGTACCTTCTCTGTTAGATTGTGATGTTTTATTTATCGAAA CAGATTGTGAAGCTTCATCGCGCCGATTAGCTCTACCTTCTCATCCCGGAGTTCCGACAACGTAAACCATGGCGGATGTGGAAGCCGATGTTGCAGTGGCGGGGCAGCCAAAGAAGAGGACGTTCAAGAAGTTCAGCTTCCGAGGCGTCGATTTGGATTCTTTGCTGGACATGTCTACCGATGAGCTGGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTTCGTCGGGGTTTGACAAGGAAGCCAATGGCTCTTATCAAGAAGCTTCGTAAAGCGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAGCCCGTCCGAACACACCTTCGGAACATGATCATTGTGCCAGAGATGATTGGAAGCATCATTGGAGTTTACAACGGCAAAACATTCAACCAAGTTGAAATCAAGCCAGAGATGATTGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCCGTCAAGCACGGTAGGCCCGGTATTGGTGCCACCCACTCTTCAAGATTCATTCCTCTCAAGTGAAAATCAGTGTCGAGTTCTTGCTTGCTTAGTTTTGTTATATTATTACATGAAACTTGGATGTTTATCAGATTTTGTTCCTAGTTTTTGCCCATTTTCTATGCTTTATATAAGCTGATTAGTACTATGGAGGCTTGAGCTATTTAGTTTTTTGAAGCTGTTGTTACTGTTAAAATTTTTATTCTACTTGTCTCATCTAAATGTAGACTTGGTTGTACCTTTCAGTTTTACGTGGTTGTTTGCTCAAATATGTCTCGTTATATTTCATATCTATGGTCTAGATATATGTCCAGATTCGAATCTGTTAGTTTGAACGTACCTTCTCTGTTAGATTGTGATGTTTTATTTATCGAAA ATGGCGGATGTGGAAGCCGATGTTGCAGTGGCGGGGCAGCCAAAGAAGAGGACGTTCAAGAAGTTCAGCTTCCGAGGCGTCGATTTGGATTCTTTGCTGGACATGTCTACCGATGAGCTGGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTTCGTCGGGGTTTGACAAGGAAGCCAATGGCTCTTATCAAGAAGCTTCGTAAAGCGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAGCCCGTCCGAACACACCTTCGGAACATGATCATTGTGCCAGAGATGATTGGAAGCATCATTGGAGTTTACAACGGCAAAACATTCAACCAAGTTGAAATCAAGCCAGAGATGATTGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCCGTCAAGCACGGTAGGCCCGGTATTGGTGCCACCCACTCTTCAAGATTCATTCCTCTCAAGTGA MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
BLAST of CmaCh17G001780 vs. Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.2e-74 Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of CmaCh17G001780 vs. Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.2e-74 Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of CmaCh17G001780 vs. Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 8.3e-73 Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 1
BLAST of CmaCh17G001780 vs. Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2) HSP 1 Score: 270.4 bits (690), Expect = 1.2e-71 Identity = 131/150 (87.33%), Postives = 143/150 (95.33%), Query Frame = 1
BLAST of CmaCh17G001780 vs. Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 3.5e-71 Identity = 135/152 (88.82%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TrEMBL
Match: A0A0A0LLK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193310 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 3.9e-77 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TrEMBL
Match: A0A151T3B5_CAJCA (40S ribosomal protein S15 (Fragment) OS=Cajanus cajan GN=KK1_016028 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 4.3e-76 Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TrEMBL
Match: B9S4T9_RICCO (40S ribosomal protein S15, putative OS=Ricinus communis GN=RCOM_0992390 PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 5.6e-76 Identity = 144/152 (94.74%), Postives = 148/152 (97.37%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TrEMBL
Match: A9P8I7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24120g PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 5.6e-76 Identity = 145/152 (95.39%), Postives = 148/152 (97.37%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TrEMBL
Match: W9RI49_9ROSA (40S ribosomal protein S15 OS=Morus notabilis GN=L484_024561 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 7.3e-76 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TAIR10
Match: AT1G04270.1 (AT1G04270.1 cytosolic ribosomal protein S15) HSP 1 Score: 280.4 bits (716), Expect = 6.5e-76 Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TAIR10
Match: AT5G09510.1 (AT5G09510.1 Ribosomal protein S19 family protein) HSP 1 Score: 280.4 bits (716), Expect = 6.5e-76 Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TAIR10
Match: AT5G09500.1 (AT5G09500.1 Ribosomal protein S19 family protein) HSP 1 Score: 258.8 bits (660), Expect = 2.0e-69 Identity = 133/152 (87.50%), Postives = 139/152 (91.45%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TAIR10
Match: AT5G09490.1 (AT5G09490.1 Ribosomal protein S19 family protein) HSP 1 Score: 253.4 bits (646), Expect = 8.6e-68 Identity = 124/152 (81.58%), Postives = 138/152 (90.79%), Query Frame = 1
BLAST of CmaCh17G001780 vs. TAIR10
Match: AT5G43640.1 (AT5G43640.1 Ribosomal protein S19 family protein) HSP 1 Score: 253.4 bits (646), Expect = 8.6e-68 Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 1
BLAST of CmaCh17G001780 vs. NCBI nr
Match: gi|702432250|ref|XP_010069156.1| (PREDICTED: 40S ribosomal protein S15-4-like [Eucalyptus grandis]) HSP 1 Score: 296.6 bits (758), Expect = 2.5e-77 Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 1
BLAST of CmaCh17G001780 vs. NCBI nr
Match: gi|449465374|ref|XP_004150403.1| (PREDICTED: 40S ribosomal protein S15-4-like [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 5.6e-77 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 1
BLAST of CmaCh17G001780 vs. NCBI nr
Match: gi|951001821|ref|XP_014507185.1| (PREDICTED: 40S ribosomal protein S15-4 [Vigna radiata var. radiata]) HSP 1 Score: 292.7 bits (748), Expect = 3.6e-76 Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 1
BLAST of CmaCh17G001780 vs. NCBI nr
Match: gi|1012350345|gb|KYP61534.1| (40S ribosomal protein S15, partial [Cajanus cajan]) HSP 1 Score: 292.0 bits (746), Expect = 6.2e-76 Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1
BLAST of CmaCh17G001780 vs. NCBI nr
Match: gi|255559955|ref|XP_002520996.1| (PREDICTED: 40S ribosomal protein S15-4 [Ricinus communis]) HSP 1 Score: 291.6 bits (745), Expect = 8.0e-76 Identity = 144/152 (94.74%), Postives = 148/152 (97.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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