Cp4.1LG11g11980 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG11g11980
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionATP dependent RNA helicase
LocationCp4.1LG11 : 9812055 .. 9822146 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTACGGAATCGCTGACGAAAATAAGCTGCCGTGAGAAACATTAGGGTGAAAGTTCGCCACACTCGGAACTTAGAAGCAGCCGCCCCGTAGTGCAGTCTGAGCTCCTGCGATCAATAGCAGCATCGAAGTTATGAACGAAGGGATGAAAACAACGACGAAGAAAATGGTTAAAGAGGATGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGCACGCTACTTTATGCGACGAACTCCGAGGTGTGTTGTGTGCCGACTTTGTTCTCTTCCTTCATCGCCTCCTTTTATAATCTGCTTTCTGTTATGCTAATCATTCTACAATCTACTGTAATAGTTTTTGAGGGTTTAGCGTATTCGGTTAATTGTATTGATTCTAATCTTGGCCTGCATCTTCCGGTGTTGTTTTTTCTTCGATTGTAACAGATAAAATGGGTTTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCTGGGCGTCATGTGTATCCTTCGAACATAACTTCTTTTAGTTGATATATAGTTGATTGCGATGCGCGTGTTTATATTTTGATAATAAACTGATTACATTGAAGAAAAATGCGTACGAATACAAAAAGGGGATATCTGGACATTGATTATCTTTATCACGTGGAAATTCATTGAATGGCACATCTATCTTTTGACATTTGCAGTGCTTCTGTAAGTTTTCTTAACTTCTTCCTGTAGTCTTGTTAATGCGGCCACGGGCACTGGCAAAACTGTTGCGTATTTGGTTCCCATCATCCATCACTTGCAGAAGTCCGATCGTAGGATTCAGCGGGCCGATGGAACTTTCTGTGCGTAACAGTAGTAATTTCTCAATTTTGCCTCTGCCCACTTATTTAATTTTATTTATATATATTTAAAAGGAAACAAGCGAGTTCATCAAGAAACCAATAAACTAGAGACCAATGCCTCCCTTCCTGAAGGGGATCAAACACTACCCTCTCGTTCTAGGATTTTCGCTGAGGTTTCTAATTAGATCACAAAGTTCTGGATTTCTTGTGAAGAGAATTTCATGCAATCAAGAGCATTAGGATAGGTGCAGGACCAAACGGAATAGAAGAACCTGACAGAGCAAGTTCCATCACTCTACAATCCAAAGAGAGACAAAATTTCATTGACGAAATCAAATAATTATGTAAAAGTATCAATCGACATTCATTGAAAGAAAAAGCTGAAAATTAATTGAATTTCAAAAGCCTGAAACCAAACTGAAGAAAGCTATAGCTAGAACAAACTTTTGTACATTGGCAGTATTGTTGAACTATCTCTCACTCACAGACATACTTGATATCTCCCATGTTTATTTGAATCTAACAAATTATTTGGCCATAGCGTTGGTTCTGGTACCAACGCGAGAGCTATGCATGCAGGTCTATGAAACTCTACAGAAATTATTACATCGTTATCATTGGATTGTCCCTGGTTACATAACAGGCGGGGAAAGTCGGTCGAAGGAGAAAGCCAGGTTGCGGAAAGGTAGGATAATCATAGTTTAAGTTATGGAATTACCATTTCATTTTGATGTAAGTTAGCTTTGTTCCATGACAATGTGTATGTGTTTGCTGGTCTTTTGGGAAAAAAATTATTTCATTTAATAAATTTTTAGCTTAACGACTTCATAGCTATAATTGTAGTAATTGGATGGCGATANTGGTCTTTTGGGAAAAAAATTATTTCATTTAATAAATTTTTAGCATAACGACTTCATAGCTATAATTGTAGTAATTGGATGGCGATAATTAGGGATGCACAATGAAACTGACAAAATTGGGCCAAACCAAAATGATTTTTCGGTTTAGTCGGTTTGCTGTTTTGTTTGATTTATGTTAAAATACCATTTTAGTTCATATGCTTGAGTCTTATTAAATTTTAGTCCTGCTTTCAAATGTCCAAATTTATTCTAGGTAGTTCTATAAATCTTTAAATTAGTCCTTATTGTTAGTTTTAACTTCAATATGATAAGATATTGAAGTTAATTTTATCAAACTTGGTACAATAATGATATCATTTCCATTTGTGGAAATAAAAGATATGATTTGGATTTGTTTCCAAAATTTATAGCGAGAAGGCTAATAGTGACTACTTTTTTTTTTATTATTATTGAAAAGTTAACAATAAACTAATAGTAGAGATTAATTTTAAGATTTGTTAAAATTACGCAAACCAAATTTGATCGTTTGAAAGTATAGGAAATAAAATAGCTCTTTGAGGTAAAACTGGCCATGTAAAATACCTTAACCTACTTTGGAATTTAACAGAGAAAGGTGTAGATAAACTATGGAAGAACTAGTAGCAAGAGAACTCCCTAGAAGGATGGGGGGACATTGTGCTTTATTTTTAATATCAAAAACATGTTTATTTTGTTGTGCTTCATGTGAGATCCCATATCGGTTNAAGGATGGGGGGACATTGTGCTTTATTTTTAATATCAAAAACATGTTTATTTTGTTGTGTTTTATGTGAGATCCCATATCGGTTGAAGAGGTGAAGGAAGCATTCCTTATAAGGGTGTGGAAACCTCCTAACAAGCGCATTTTAAAACTGTGAGGCTGACGACGATACCCTAAACCCTAAACCCTTGAAACCGTGAGGCTGACGACGATACCCTAAACACTAAAAACCGCTATGGCTAACATGCCAATTTTTTTATGGTCTGTGCTCAGGTNTCCTAACAAACGCTTTTTAAAACTGTGAGGCTGACGACGATACCCTAAACACTAAAAACCACTATGGCTAACATGCCAATTTTTTTATGGTCTGTGCTCAGGTATATCAATTTTAGTTGCAACGCCAGGTCGGCTCTTGGATCACCTAAAGAACACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGGTATGGTTACTCTCTGCTTTTTAGTACAATGCATTCTGGATCGGTCCTCTTATTTTTCACTCTTCTACATGAAACTTGTGCATCTATACAGAATTTTCGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGATCATTTGGGCTCGAGGAAGAATATTGTCAATAAGGATAATGGCACTTCAAGTTTTGAATTCCCGCAGCAGAATTTGCTTTTTTCGGCCACCTTAAACGAAAAAGTAAACTGTTTTGCCAAAATTAGTTTAGAGAATCCCATTATGATTGGTCTTGATGCTGGCAACAATGCCCTTGAATTTCAACCATCTGAACATGGTCGATTTTTGGGACATGACATAAATGATGAAGCCCAGCCCACAAGGAAGGAAAAGAACTTAATTGCAGATTATAAAATACCAACCCAGTTAGTTCAGAGTTACGTGCAAGGTAATTTGATTAAAAGTTTTATTTTATGAACTTTCACATGGTATTCATGAGTGCAGAGGATTGGATCCATGTTACTTTGACATTGAATTGACTATCCAGTGCATCCCTTTTGTATTTTTGTGCAGAGCCATGAAATTTCCTTTCTTAGGTCATCTACAACTGTGGTGCTTGCATGTAGATCTTTGAGTTTTATTTGGTTTGCCTCTTTGTTGTCTCAGACTATTGGTTTTGTTTTAATGTAACATAATTAGTAATTTTTTTGTAATTTTCATTTAAATGGTTAATTGTTCTAATTTTTTTTGTTAGTTGTTTACCTAGTTAGTAGGCTGTAGGCTAACCACTAATCCCCTCTCAACAAGGGTTAATCTCATGTTATTGGCTTACCTTTTGAATCCTAATAAACATTCCTTCGATGATTTTTGGAGATGTCCTTTGATTGTTTGGTTGCATGAAATTTGTATAATAGCAACCCGATGAAAGGGGCTGATGGCTGGAAAAAGAGTAGCTACCCGCCAAAATAACATAGTTCAGTCTGATATATAATATAATATATTATAAACTATATGATATTGTAAAATAATAATCAAAATTAATTAACGATAGTTTATATTCAACCTAATATTTAGTGGGTAACTACGACTTTATGGTTTATAAGTATATTATAAAACACCTTTTGAACAATTATTTAAATTAGGGTTCAATTTTTGTAAATGCTACCAAACACATTTGGAAACATGAAATACAACTTAGTTTCATTAAATTTCTTGTTTTCAATTTTTTTTTCCTGATTGCATACCAAACAAGTCCTCACTAGTTATCCTACATCATAAAAAGCATCCCTTTGAGGATTTTTAGAGATTTTCTCCTTTGATGCTTGGTTGTATAATGTTTGGTCCTTTTTGTTCTTTTGCCCTCCTATTCATGCTGCATCTAACATGTACACTTGTGATTAATTTTTTGTTTGCAGCACCGTGTGCTTCTCGGTTGGCTGTGCTTTTTTCTGTTCTGAAGTATTTGTTTGAGAGAGACTGCTTCGAGAAGGTAAAGACGATTCAATACTTATGTTTAGGTGGAAGATTTAGTATTATCACTCGTAAAAAAGGTTTTATTTTTATCATGTTCTGAGCAGTTATAGAATAATGCACACAAATGCAATAAAAGTAATGTGGCTCTCTACTCTTGTGTCACTCTATCTTAGTACTTTTTGTTGCATCTCTAGGAAGAGTTGTGTGAGGATATTTGTAGAGGCAAACTGCCCAAAAATGGAAGGATATATTTGGAGAGGCAAACTGCCTAATAATTAGGATGTATTCTTACTTCATTCCCTGCCTTCAAGACTCAAGAGCTTCAATAAAGACAACATTCAAAAAGCCCTTCGTTCATCTCTCACTTCATGTTTGTCTTGATTGCAAGAATAGAAGAGGAGCTTTGATCATGTTTTCATCTGATGTGAATTAGTTTTCATTTGTCAGTTCTAATGCACCAAGTCTTTCTGCTTATGATGTATATCTTGTAAATCATCAAAAATGATCTATCCAAAGAACAATAGTTATCAAAATTGATCTTCTTACTCTATCAGCATGGGAAGAAGTCAAGTTGATGGTGATGAAAATCCTGCTCTCTTCCATAGGTTTGTGGCTGAAAATAGAAGGAAACGTACAATTGGTGAAATTCTTTTGAGCACGGGTGTGTTTGTTGAATGTTTCTGATAATGAAGAAGATGAATTTGTAGACTTCTATAACCATTTGCATATTTGCCTGATATCCCTAATTGGAGTCCTCTAACGGACTTACCAAGTGATCAGTTGGAAGAACCTTTTGCCAAAGATGAGATTTGTAAAGCTGTCAATGCTATGGGCACTAAAAGAGCGTTCAATTATTTTTTTAGGAATGCCACCATTAATGTGAGCCTTAATGAAACATATCTGTCTCATCCCCTAGAAGATTGGAGCTAAACTTGTGGGGGATTTTAGACCCATTAGTCTCACCTCATGTCCTTGCAAGATCACGAGGTTATCTGAGAGATTAAAGTCTTGTCTTTTACTATATTTGATTTTCTTCAATCCGCTACTTTTGGATGCATCTCTTATTGCTAATGTGTTAACTGGTGAATGGAAAAGGAAAACAGAGAAAGGGATGGCCATTAAGCTTGATGTTGAAAAGGCTTTTGACTTGGTTGATTGGAATTTTCTGGATGAAATCCTTTGTGTCGAGGNTCAAGCTTGATGTTGAAAAGGCTTTTGACATGGTTGATTGGAATTTTCTGGATGAAATCCTTTGTGTCGAGGGTTTTAGGATCAAATGGAGAAGATGGATTCAAGGTTGTAACTCAACTGCCAACTACTTTATCATTATCAATGGCAAGCCTAGAGGCAGGATCAGAGCCACTAGGGGTTTACGCTAAGGGGATCCCCCTTCCTCTTCATCATGGTGATTGATCAAAGGTTTTCCGATTGGCAAAGATATCTATGCTCTTCCATTGATCATCTAATATGAATTTGGGGATGACACCATCCTTTTCTCCATACAAAGGAGGTGACAACCTTTTCTGCATTATTAAATATTTGGAGGAAGCTTTGGGCCTTAATATAAACTGAACAAATTTGAAACTATGGGAATTGGTTTCGGTAATCAGCAACTATCTTATCTTGGTAGCTGGTTTGGGTGCAAAATGGGCAAGTGGCTAAATACTTACCTTGGCTTACCCCTTAATGGTAAGCCTAGCTCATCATCCTTTTGGGACCTGATTTTTGAGAAAGTTTAGAAAGACTTGTGTTTCGGAACTTACCTATCCAAGCGGTCGATTCATGCTACATTTTAAAACCTCTCTATTTATTATTGATATCTTTTCAAAGCTCCAACAAAGGTGGCCTACAGTTTAGAGAAACTTCTTAGAACTTTTTTTCTGGAAAGGTAGTATTGAACAAAAAGGCAACCATCTCTTAAAATGGGAAGTTGTGAAGGCCCCAATTGAAGAAGGTGGACTCGAAATCAGAGATTTATAACAGAAATGCCTCTCTTCCTGCAAAATGGATTTGGCGTTTCCACCTTGAAAAAGAGGCTTTGTGGAGGATGGTTATTGTTGCTAAATATGGATCTTGCCACTTTGACCTAAAACCACCAACTATAATTTTAAATTCATCCAGAGGGCCTTGGAAATCTATTGATAAATTGAAAGCTGTTGTCTGTTCCCATATTTCCATCAAGGTCTGAAATGGTAACAATACACACTTTTGGAAGGATAATTGGAGTGGAAATACTAGCCTTCAATACGTGGACCCTTGGCTGTACCATCTCTCTTTTGTAAATCTAACTGAATCTAAAGGGATTAAGATTTTCTAGAGAATTCCTTATAGAGTCCAAGAGATTCTAAGATGTTTATAGAATATCTTGGAATATTTGTTTACAACCTCCAAGATAATTCTAGATAGAACTAATGTGGGATATATTTGAGATAATTAAGTGTTGATCCTCCAAGAAGCTTATAAACGAGTTAGTGTTATTTTTTATTTTACACGATGGCTATAGTTGCCAGAAGGTAACAAAATTACTTAGTTACTTCTCATTTTGATTACTATTTTGTGAACTATTATTATTAACCTTTTCTTCTTTCATGACTCCATTGTTACTAACTTGTTTACAGACTTTGGTGCTCTTTTCAACATGTGATGCTGTAGATTTCCACTACTCCCTGTTTGGTGGATTTAAATTCTCCTCTTCAGAATCAGAACCGAGGTCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGCATGAAGCCGGAGGATCGGAGAACAACATTTCAGGCCTTCAAATCAGAGAAGCTTGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGCTTAGATTTTCCAAATGTTAGATGTATTATTCAATATGATCCTCCAGGAGAGGCAATTGAGTATGTGCATAGGTAACTGCACTTACTTTTTGAGAAAGAAAATGCTCTCTTTATTATTTATTTCTACTTGTTGGTACTCTTCTTCTGTATTATTAGTACTCTTCTTCTAAATAAGGTGATCTTTAAATTATTTTAAAAAACCTAACACCTATATCAAGTGATCTTTCAATTATTTCCTACAAATCATGCAGTAAGTTGGTATTAATAGAGTGCACGTGTAGCTATGATATTTCACCAGCGGGGTGATGACAAAATTCCTTATTAGTTGGCTTCCGGGGCCTGCTTTATCAACTACTCAAGTCCAATTCATCTAGCATTTACATTTGTGAATATCCTGATGCAGGGTTGGAAGAACAGCTCGCTTAGGTGAAAGAGGAGATTCATTGCTATTCCTACAACCAACTGAAATAGATTATTTGCAAGATTTGCGGAATCATGGTGTATCTCTTACTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCGGTTCGTGGCAGGAAGCACTTTGTAGAGAAGTTCGTTTCTTTAGAATCACATTCCTGGATCATGTTCTTGCAGAGGGCAGTCGAATCGTTTATTGCAGCTGAGGTAGTTCTTTTCACCATCCCTCTTCTCTTTTGGTCTAATTAACAGTTTCAGAGTATAGGAGCCTTCTGACAAGTGCTTAATTTCATTAATATGAATGACATGTCACATTGTCTTTGCCTGGGGGAGCTTCTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTGGTGAAATTGCTATGATTTGACAATGCATTCGATCATTCTTAGAATTTTCATTTAGAGATGTTTAATATAAACACAAGGCATCAACTTCTGTTTTTTTTTTTTAAGAACTCTGCATTATTGTAACCTTGATTCATGAATAACACACTTTCATGAAAAGAATTGGCTAATGATTTCATTCTCCATTTTTGTTGTTTTTTGCTTCGAAGGTACTTCACTTTTAGGTTTTATTCTAGAATCTAAAATGACATGATTTCATTTGTAGGCTTTCATTGTGGTTCTGTTATGTATCAAGAATGAGTACAAATGAAATGAGTCTTTCCAATCCCTTTGCTATTATTGTTTATGTCAAAACATTGAGCCTTCTTAACTTCCTGGTTTCACCTCCAAAATCAAGACTATTTTGGTTGTCATAGAATCCTCATAGTACCCTAACAGAAAGTGGAAGCCTTGAACTAAGAAAATGTAAATTGACAATAAATAGTAAATAGGACACAAACTGTTAAGCCACATAATTGTACGTTAATGTAAATGTTCACTTTCCCTGGAATCAGGAACATATACTAGGACAACCTTTCATGAAGATATTGTTGATATTTAGTAAATTTTTATAAAAATTGTATCAAACTTCTCAGGATGTCGTGAGTGAATATAAACATGCATGGACTTAAATTTTTGTCCCTTATCCAGCAATTTCCTACCTTCACTCTTCATGTGGTCTGGCCTTTGATGAAAATGACTCAATCCCTCCTAAATTCTTTTTGAGTATTAATTACCTCTCATTCCTTCGGTTTTTTCTCCTCTGGAATTCAACATGTGAGTGTGAGAGTGGAAGGATTGAATCTCTGACTTCCTAACCAGTTGAGTTATGTTCATGTCTCTTTTGATGTCTTTCTATTTGTTACTTCAATTATACAGCATTCTTAGATTGTGGTCAATAATTTGTCTTTTTTGTTCATATGAGGTACTTTATCGAATACTAATGAGATATCATCTATGCTTCAGCCAGGTGCAAGTCTAACAAAGAAAAAGAAATATTCACTACTCCATTTATTTTCTCTCATTGAGTGTTTTCAATTCTAACATCAGTTAACTGGTAGCCACATATTGAGCTCAACACAAGTCTTCTGGAACTCAAAGAGATCGTTTGTTCTCCTTTCTTTGCATGATAGAATGTTCTGTACACACCAAACATTCTATTGATTTTCCTGTTTTCAAGAGTAAAGAAGTAATGGACTTCCAAAAATGCACCCCCAGCGTTTCAAAAGAATTATTTGCTTTTTTCTGTTTTTTGTTTTTTTAGCTTTTCCTTTTTGTTATTAAATTATTTTTAACCTTATTTCGGGATTACTTTAATATGTTTGCATTGCTTTCATNTTTGTTATTAAATTATTTTTAGCCTTATTTCGGGATTACTTTAATATGTTTGCATTGCTTTCATCAGCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTAGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCGTCTGTTGTTGGAAAATCATTCAAGAAACAGGAAAAGAAAAGGAAAAGATATCCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAAATCAGTGGAAAGGGTAAGCATGGAGGGGCTTTTAGTGAATGTGCAACATAACTGTTGATTCATTTTGTTTACTTTTCTACTTGGTAGCTATGTTGAATGCTGTGATTGTGAACTGTTTATCATGTCTAGGTCGCGTGCATCAAATGCAAGGCACCTCCCAAATTTTGAATTATAATCAGTTATGTTTATCATGAGTTATGTGTATGCAACTTGTAAACGAATCTGGCCTAATTGAGCGAGTATGTGTGATTGAGTAGGTGTACATATTGGAGTGAAGCTTTTACTGTTNGACTGATTGAGTAGGTGTACATATTGGAGTGAAGCTTTTACT

mRNA sequence

CGTACGGAATCGCTGACGAAAATAAGCTGCCGTGAGAAACATTAGGGTGAAAGTTCGCCACACTCGGAACTTAGAAGCAGCCGCCCCGTAGTGCAGTCTGAGCTCCTGCGATCAATAGCAGCATCGAAGTTATGAACGAAGGGATGAAAACAACGACGAAGAAAATGGTTAAAGAGGATGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGCACGCTACTTTATGCGACGAACTCCGAGATAAAATGGGTTTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCTGGGCGTCATGTTCTTGTTAATGCGGCCACGGGCACTGGCAAAACTGTTGCGTATTTGGTTCCCATCATCCATCACTTGCAGAAGTCCGATCGTAGGATTCAGCGGGCCGATGGAACTTTCTCGTTGGTTCTGGTACCAACGCGAGAGCTATGCATGCAGGTCTATGAAACTCTACAGAAATTATTACATCGTTATCATTGGATTGTCCCTGGTTACATAACAGGCGGGGAAAGTCGGTCGAAGGAGAAAGCCAGGTTGCGGAAAGGTATATCAATTTTAGTTGCAACGCCAGGTCGGCTCTTGGATCACCTAAAGAACACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGAATTTTCGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGATCATTTGGGCTCGAGGAAGAATATTGTCAATAAGGATAATGGCACTTCAAGTTTTGAATTCCCGCAGCAGAATTTGCTTTTTTCGGCCACCTTAAACGAAAAAGTAAACTGTTTTGCCAAAATTAGTTTAGAGAATCCCATTATGATTGGTCTTGATGCTGGCAACAATGCCCTTGAATTTCAACCATCTGAACATGGTCGATTTTTGGGACATGACATAAATGATGAAGCCCAGCCCACAAGGAAGGAAAAGAACTTAATTGCAGATTATAAAATACCAACCCAGTTAGTTCAGAGTTACGTGCAAGCACCGTGTGCTTCTCGGTTGGCTGTGCTTTTTTCTGTTCTGAAGTATTTGTTTGAGAGAGACTGCTTCGAGAAGACTTTGGTGCTCTTTTCAACATGTGATGCTGTAGATTTCCACTACTCCCTGTTTGGTGGATTTAAATTCTCCTCTTCAGAATCAGAACCGAGGTCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGCATGAAGCCGGAGGATCGGAGAACAACATTTCAGGCCTTCAAATCAGAGAAGCTTGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGCTTAGATTTTCCAAATGTTAGATGTATTATTCAATATGATCCTCCAGGAGAGGCAATTGAGTATGTGCATAGGGTTGGAAGAACAGCTCGCTTAGGTGAAAGAGGAGATTCATTGCTATTCCTACAACCAACTGAAATAGATTATTTGCAAGATTTGCGGAATCATGGTGTATCTCTTACTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCGGTTCGTGGCAGGAAGCACTTTGTAGAGAAGTTCGTTTCTTTAGAATCACATTCCTGGATCATGTTCTTGCAGAGGGCAGTCGAATCGTTTATTGCAGCTGAGCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTAGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCGTCTGTTGTTGGAAAATCATTCAAGAAACAGGAAAAGAAAAGGAAAAGATATCCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAAATCAGTGGAAAGGGTAAGCATGGAGGGGCTTTTAGTGAATGTGCAACATAACTGTTGATTCATTTTGTTTACTTTTCTACTTGGTAGCTATGTTGAATGCTGTGATTGTGAACTGTTTATCATGTCTAGGTCGCGTGCATCAAATGCAAGGCACCTCCCAAATTTTGAATTATAATCAGTTATGTTTATCATGAGTTATGTGTATGCAACTTGTAAACGAATCTGGCCTAATTGAGCGAGTATGTGTGATTGAGTAGGTGTACATATTGGAGTGAAGCTTTTACTGTTNGACTGATTGAGTAGGTGTACATATTGGAGTGAAGCTTTTACT

Coding sequence (CDS)

ATGAACGAAGGGATGAAAACAACGACGAAGAAAATGGTTAAAGAGGATGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGCACGCTACTTTATGCGACGAACTCCGAGATAAAATGGGTTTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCTGGGCGTCATGTTCTTGTTAATGCGGCCACGGGCACTGGCAAAACTGTTGCGTATTTGGTTCCCATCATCCATCACTTGCAGAAGTCCGATCGTAGGATTCAGCGGGCCGATGGAACTTTCTCGTTGGTTCTGGTACCAACGCGAGAGCTATGCATGCAGGTCTATGAAACTCTACAGAAATTATTACATCGTTATCATTGGATTGTCCCTGGTTACATAACAGGCGGGGAAAGTCGGTCGAAGGAGAAAGCCAGGTTGCGGAAAGGTATATCAATTTTAGTTGCAACGCCAGGTCGGCTCTTGGATCACCTAAAGAACACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGAATTTTCGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGATCATTTGGGCTCGAGGAAGAATATTGTCAATAAGGATAATGGCACTTCAAGTTTTGAATTCCCGCAGCAGAATTTGCTTTTTTCGGCCACCTTAAACGAAAAAGTAAACTGTTTTGCCAAAATTAGTTTAGAGAATCCCATTATGATTGGTCTTGATGCTGGCAACAATGCCCTTGAATTTCAACCATCTGAACATGGTCGATTTTTGGGACATGACATAAATGATGAAGCCCAGCCCACAAGGAAGGAAAAGAACTTAATTGCAGATTATAAAATACCAACCCAGTTAGTTCAGAGTTACGTGCAAGCACCGTGTGCTTCTCGGTTGGCTGTGCTTTTTTCTGTTCTGAAGTATTTGTTTGAGAGAGACTGCTTCGAGAAGACTTTGGTGCTCTTTTCAACATGTGATGCTGTAGATTTCCACTACTCCCTGTTTGGTGGATTTAAATTCTCCTCTTCAGAATCAGAACCGAGGTCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGCATGAAGCCGGAGGATCGGAGAACAACATTTCAGGCCTTCAAATCAGAGAAGCTTGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGCTTAGATTTTCCAAATGTTAGATGTATTATTCAATATGATCCTCCAGGAGAGGCAATTGAGTATGTGCATAGGGTTGGAAGAACAGCTCGCTTAGGTGAAAGAGGAGATTCATTGCTATTCCTACAACCAACTGAAATAGATTATTTGCAAGATTTGCGGAATCATGGTGTATCTCTTACTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCGGTTCGTGGCAGGAAGCACTTTGTAGAGAAGTTCGTTTCTTTAGAATCACATTCCTGGATCATGTTCTTGCAGAGGGCAGTCGAATCGTTTATTGCAGCTGAGCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTAGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCGTCTGTTGTTGGAAAATCATTCAAGAAACAGGAAAAGAAAAGGAAAAGATATCCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAA

Protein sequence

MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL
BLAST of Cp4.1LG11g11980 vs. Swiss-Prot
Match: RH17_ARATH (DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana GN=RH17 PE=2 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 5.1e-203
Identity = 360/573 (62.83%), Postives = 439/573 (76.61%), Query Frame = 1

Query: 18  IFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAY 77
           +FASC+F+SLGL   L D+L+++MGFE PTLVQAQAIP ILSGR VLVNA TGTGKT+AY
Sbjct: 25  LFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAY 84

Query: 78  LVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGES 137
           L P+IHHLQ    ++ R+ GTF+LV+VPTRELC+QVYETL+KLLHR+HWIVPGY+ GGE 
Sbjct: 85  LAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEK 144

Query: 138 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 197
           ++KEKARLRKGISIL+ATPGRLLDHLKNT+SF++ NL W++FDEAD I ELG GKE+E+I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204

Query: 198 LDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNAL 257
           +  LGS +N   +++        +QNLL SATLN+KVN  AK+SL++P+MIGLD  N  L
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLD--NTKL 264

Query: 258 EFQPS-EHGRFLGHDINDEAQPTRKEKN-LIADYKIPTQLVQSYVQAPCASRLAVLFSVL 317
           +   S E       D  D      K  N L  DY IP+QLVQ Y++ PC +RL  L SVL
Sbjct: 265 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 324

Query: 318 KYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKF--SSSESEPRSEHLFLKCKIFRLHGS 377
           K LFER+  +K +V FST DAVDFHYSL   F++  +S   E  ++ LFLKCK FRLHGS
Sbjct: 325 KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGS 384

Query: 378 MKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTAR 437
           M+ EDRR+ F  FK+EK A+LLSTD+AARGLDFP VRCIIQYD PGEA EYVHRVGRTAR
Sbjct: 385 MEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 444

Query: 438 LGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHS 497
           +GE+G++LLFLQP EIDYL++L+ HG SLTEYPL+KVLD FP+ G    ++K +SLESH 
Sbjct: 445 IGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIKKVLSLESHP 504

Query: 498 WIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFA 557
           W++ LQRA+ES   AEP M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFA
Sbjct: 505 WVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFA 564

Query: 558 LKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           L++QPS+VGKS  K+  KRKR  +Q     KKR
Sbjct: 565 LREQPSLVGKSHHKETMKRKRDERQKGQQGKKR 595

BLAST of Cp4.1LG11g11980 vs. Swiss-Prot
Match: RH17_ORYSJ (DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica GN=Os05g0110500 PE=2 SV=2)

HSP 1 Score: 696.4 bits (1796), Expect = 2.6e-199
Identity = 345/587 (58.77%), Postives = 446/587 (75.98%), Query Frame = 1

Query: 6   KTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLV 65
           K+   K   ++ +FASC+F  LGLH TLC  L+DKMGF+ PT +QAQAIP  +SG+H+LV
Sbjct: 7   KSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLV 66

Query: 66  NAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYH 125
            AATGTGKT+AYL PI+H LQ  + R++R DGTF+LVLVPTRELC+QVY   Q+L+HR+H
Sbjct: 67  KAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFH 126

Query: 126 WIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRI 185
           W+VPGYI GGE+R+KEKARLRKGISIL+ATPGRLLDHL++TSSF+Y N+ WIVFDEAD I
Sbjct: 127 WLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSI 186

Query: 186 FELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENP 245
            ELG GK +E+IL+HLGSR +  N+ N        +QNLL SATLNEKVN  AKISL+NP
Sbjct: 187 LELGFGKALEDILEHLGSRNDTSNQ-NKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNP 246

Query: 246 IMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-----IADYKIPTQLVQSYV 305
           +MIGLD  N+      S HG+     ++D+ +   ++ N+     + D+K+P QLVQ YV
Sbjct: 247 VMIGLDEQNS------SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYV 306

Query: 306 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSS-ESEPRSE 365
           +  C SRLA+L ++LK LFER    K +V  STCD+VDFH+++    ++S   + +   +
Sbjct: 307 KVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKK 366

Query: 366 HLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 425
             F+ CK+FRLHG+M  +DR+ +F  F SEK A+L+STD+AARGLDFP V+CIIQYD PG
Sbjct: 367 QKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPG 426

Query: 426 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGR 485
           EA EYVHRVGRTAR+GE+G++LLFLQP E DYL+DL  HG SLTEYPL KVLDSFPV G+
Sbjct: 427 EASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQ 486

Query: 486 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 545
           +    K +SL+ H WIM LQRA+ESF+ +E    KLA+ AFCSWVRAYTAHRGELK+IF+
Sbjct: 487 RLHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFM 546

Query: 546 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           VKKLHLGHVA+SF LK+QPS++G+S + Q KKRK+  K++  + +++
Sbjct: 547 VKKLHLGHVARSFGLKEQPSLLGRSHQVQLKKRKKEQKRERPAKRRK 586

BLAST of Cp4.1LG11g11980 vs. Swiss-Prot
Match: DDX31_HUMAN (Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens GN=DDX31 PE=1 SV=2)

HSP 1 Score: 393.3 bits (1009), Expect = 4.7e-108
Identity = 235/589 (39.90%), Postives = 336/589 (57.05%), Query Frame = 1

Query: 15  EDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKT 74
           ++++F S  F  LGLH  L   +   +     T VQ Q+IP +L GR  LV + TG+GKT
Sbjct: 223 QEKVFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKT 282

Query: 75  VAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITG 134
           +AY +P++  LQ  + +IQR+DG ++LVLVPTREL +Q ++T+QKLL  + WIVPG + G
Sbjct: 283 LAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMG 342

Query: 135 GESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEV 194
           GE R  EKARLRKGI+IL++TPGRL+DH+K+T +  +S L W+VFDEADRI +LG  K++
Sbjct: 343 GEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDI 402

Query: 195 EEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIG-LDAG 254
             IL       N VN +         +QN+L SATL E V   A ISL +P+ I  LD  
Sbjct: 403 TVIL-------NAVNAECQ------KRQNVLLSATLTEGVTRLADISLHDPVSISVLDKS 462

Query: 255 NNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVL-- 314
           ++ L   P +        + +   P   +K  +  + IP  L Q     P   RL  L  
Sbjct: 463 HDQL--NPKDKA------VQEVCPPPAGDK--LDSFAIPESLKQHVTVVPSKLRLVCLAA 522

Query: 315 FSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHL---FLKCKIF 374
           F + K  FE D  +K +V FS+C+ V+FHYSLF     SSS   P S  L    ++ K  
Sbjct: 523 FILQKCKFEED--QKMVVFFSSCELVEFHYSLFLQTLLSSS-GAPASGQLPSASMRLKFL 582

Query: 375 RLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRV 434
           RLHG M+ E+R   FQ F   +  +LL TD+AARGLD P V  I+QY+ P    EY+HR+
Sbjct: 583 RLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRI 642

Query: 435 GRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVL------DSFPVRGRKHF 494
           GRTAR+G  G SLL L P+E +Y+  L +H ++++E  +  +L      D F  +G++  
Sbjct: 643 GRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCF--KGKRWG 702

Query: 495 VEKFVSL---ESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 554
            +K  ++   E       LQ   E ++ +    +  A+KA  S+++AY  +  ELK IF 
Sbjct: 703 AQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFH 762

Query: 555 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           V+ LHLGHVAKSF L+  P  +    +K+ K   + P     +  K +L
Sbjct: 763 VRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDLHKKTQSKHSL 783

BLAST of Cp4.1LG11g11980 vs. Swiss-Prot
Match: DDX31_MOUSE (Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus GN=Ddx31 PE=2 SV=2)

HSP 1 Score: 377.5 bits (968), Expect = 2.7e-103
Identity = 233/589 (39.56%), Postives = 325/589 (55.18%), Query Frame = 1

Query: 5   MKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVL 64
           + +T  K  +E ++F+   F  L LH  L   +   +     T VQ Q+IP +L GR  L
Sbjct: 87  LHSTVVKQARE-QVFSPEAFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDAL 146

Query: 65  VNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRY 124
           V + TG+GKT+AY VP++  LQ    +IQR+DG ++LVLVPTREL +Q ++T+QKLL  +
Sbjct: 147 VRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPF 206

Query: 125 HWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADR 184
            WIVPG + GGE R  EKARLRKGI+IL++TPGRL+DH+K+T +  ++ + W++ DEADR
Sbjct: 207 TWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNLHFNRIRWLIVDEADR 266

Query: 185 IFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLEN 244
           I +LG  K++  IL       N VN +         +QN+L SATL E V     ISL N
Sbjct: 267 ILDLGFEKDITVIL-------NAVNAECQ------KRQNVLLSATLTEGVTRLVDISLHN 326

Query: 245 PIMIG-LDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIA--DYKIPTQLVQSYVQ 304
           P+ I  LD   N                     QP  KE   I    + IP  L Q  V 
Sbjct: 327 PVSISVLDKNCN---------------------QPNPKEVASIQLNSFAIPESLDQHVVL 386

Query: 305 APCASRLAVL--FSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 364
            P   RL  L  F + K  FE++  +K +V FS+C+ V+FHYSLF       S   P SE
Sbjct: 387 VPSKLRLVCLAAFILQKCKFEKN--QKMIVFFSSCELVEFHYSLFLHTLLCHS-GTPTSE 446

Query: 365 HL---FLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYD 424
           HL       K  RLHG+M+ E+R + F  F   +  +LL TD+A+RGLD P V  I+QY 
Sbjct: 447 HLPSASWPLKFLRLHGNMEQEERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYS 506

Query: 425 PPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVL----- 484
            P    EY+HR+GRTAR+G  G SLL L P+E +Y+  L +H +++ E  +  +L     
Sbjct: 507 APSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAK 566

Query: 485 -DSFPVRGRKHFVEKFVS-LESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTA 544
            D F  R R     +     E       LQ   E ++ +   M+  A+KA  S++RAY  
Sbjct: 567 DDCFKRRQRGAQKSRASGPQEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYAT 626

Query: 545 HRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQ 579
           +  ELK IF V+ LHLGHVAKSF L+  P  +  S  K+   ++ +P++
Sbjct: 627 YPKELKSIFHVRALHLGHVAKSFGLRDAPRNLSVSAVKKASLKRPHPRR 637

BLAST of Cp4.1LG11g11980 vs. Swiss-Prot
Match: Y8611_DROME (Probable ATP-dependent RNA helicase CG8611 OS=Drosophila melanogaster GN=CG8611 PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.5e-93
Identity = 205/575 (35.65%), Postives = 316/575 (54.96%), Query Frame = 1

Query: 3   EGMKTTTKKMVK--EDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 62
           E +K   ++ VK  ++ IF     ++LGLH      L D +     T VQ + IP +L G
Sbjct: 306 EALKQLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQG 365

Query: 63  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 122
           + VLV + TG+GKT+AY +P++  LQK   RIQR DG  +LV+VPTREL MQ YE +QKL
Sbjct: 366 KDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKL 425

Query: 123 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 182
           +  Y WIVPG + GGESR  EKARLRKGI+IL+ TPGRL+DHL +T+SF  + L +++ D
Sbjct: 426 VKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILD 485

Query: 183 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQ-QNLLFSATLNEKVNCFAK 242
           EADR+ ELG  ++V+++++ +  ++            E PQ Q +L SATL  +V   A 
Sbjct: 486 EADRLLELGYERDVKQLVEAIDKQR------AECEDKELPQLQRMLLSATLTSQVQQLAG 545

Query: 243 ISLENPIMI--GLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQ 302
           ++L+NP+ I    +A + AL+ +       +   +  +      ++++     IP  L  
Sbjct: 546 LTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQL 605

Query: 303 SYVQAPCASRLAVLFSVLKYLFERDCFE-KTLVLFSTCDAVDFHYSLFGGF---KFSSSE 362
           SYV  P   RL  L S+L    +    + K +V  ST + V+FH+ +       +    E
Sbjct: 606 SYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEE 665

Query: 363 SEPRSEH--------LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLD 422
            E             L    + F+LHGSM   +R+  F+ F+     +LL+TD+  RG+D
Sbjct: 666 DEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGID 725

Query: 423 FPNVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEY 482
            P+++ ++QY PP    ++VHRVGRTAR G +G ++LFL P+E  +++ L    + + + 
Sbjct: 726 VPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQG 785

Query: 483 PLVKVLDS-FPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWV 542
            +   L +  P       V++  S         LQ   ++ +  +  +   + KAF SW+
Sbjct: 786 DMYAYLQTLLPKDDEARTVQEAAS--------NLQHKFQTLLEDDRELHDKSCKAFVSWM 845

Query: 543 RAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPS 560
           + Y+    ELK IF V+  H+GH AKSFALK+ PS
Sbjct: 846 KFYSTFPKELKPIFNVRIAHMGHFAKSFALKEAPS 866

BLAST of Cp4.1LG11g11980 vs. TrEMBL
Match: A0A0A0LEQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000040 PE=3 SV=1)

HSP 1 Score: 863.6 bits (2230), Expect = 1.4e-247
Identity = 442/480 (92.08%), Postives = 450/480 (93.75%), Query Frame = 1

Query: 111 MQVYETLQKLLHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFL 170
           MQVYE+LQKLL RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFL
Sbjct: 1   MQVYESLQKLLQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFL 60

Query: 171 YSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSAT 230
           YSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNI VNKDN  SSF FPQQNLLFSAT
Sbjct: 61  YSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIHVNKDNAISSFGFPQQNLLFSAT 120

Query: 231 LNEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IAD 290
           LNEKV  FAKISLENPIMIGLDAGN+ALEFQP+E GRFL HDINDE  P +KE N  IAD
Sbjct: 121 LNEKVTHFAKISLENPIMIGLDAGNSALEFQPTERGRFLEHDINDEVHPIQKENNFSIAD 180

Query: 291 YKIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFK 350
           YKIP+QLVQSYVQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFGGFK
Sbjct: 181 YKIPSQLVQSYVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGGFK 240

Query: 351 FSSSESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPN 410
           FSS ESE R EHLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP 
Sbjct: 241 FSS-ESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPK 300

Query: 411 VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLV 470
           VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLV
Sbjct: 301 VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLV 360

Query: 471 KVLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT 530
           KVLDSFPVRGRK FVEK VSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT
Sbjct: 361 KVLDSFPVRGRKQFVEKLVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT 420

Query: 531 AHRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           AHRG LKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKRTL
Sbjct: 421 AHRGALKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 479

BLAST of Cp4.1LG11g11980 vs. TrEMBL
Match: A0A067LD87_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10192 PE=3 SV=1)

HSP 1 Score: 799.3 bits (2063), Expect = 3.2e-228
Identity = 406/588 (69.05%), Postives = 478/588 (81.29%), Query Frame = 1

Query: 3   EGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRH 62
           +G +   K++ K  EIFASC+F+SLGLH TLC+EL++++GFE PTLVQAQAIP +LSGRH
Sbjct: 2   KGEREEEKELNKNSEIFASCSFSSLGLHPTLCNELQERLGFEAPTLVQAQAIPVVLSGRH 61

Query: 63  VLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLH 122
           VLVNAATGTGKTVAYL PIIHHLQ    +I+R  GTF+LVLVPTRELC+QVYE LQKLLH
Sbjct: 62  VLVNAATGTGKTVAYLAPIIHHLQSYSPKIERNQGTFALVLVPTRELCIQVYEILQKLLH 121

Query: 123 RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEA 182
           R+HWIVPGY+ GGE R+KEKARLRKGISIL+ATPGRLLDHLKNTSSF++SNL WI+FDEA
Sbjct: 122 RFHWIVPGYVMGGEKRTKEKARLRKGISILIATPGRLLDHLKNTSSFMHSNLRWIIFDEA 181

Query: 183 DRIFELGCGKEVEEILDHLGSR-KNIVNKDNGTSSFEFPQ-QNLLFSATLNEKVNCFAKI 242
           DRI ELG G+E+E+ILD LGSR    V K N  SS    Q QNLL SATLNEKVN  AKI
Sbjct: 182 DRILELGFGQEIEQILDLLGSRLTEPVVKGNKVSSISTSQRQNLLLSATLNEKVNNLAKI 241

Query: 243 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQ-PTRKEKNLIADYKIPTQLVQSY 302
           SLENP+MIGLD     L+ Q  EH   +  + +DE + P++       DYK+P+QLVQ Y
Sbjct: 242 SLENPVMIGLDDKKMQLD-QLIEHTESVESNTDDELECPSKVTNPSTGDYKLPSQLVQKY 301

Query: 303 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFS-SSESEPRS 362
           V+ PC SRLAVL S+LK+LFE++  +K +V FSTCD VDFHYSL   F++S +S+SE   
Sbjct: 302 VKVPCGSRLAVLISILKHLFEKETSQKIVVFFSTCDGVDFHYSLLSDFRYSPNSQSEAEG 361

Query: 363 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPP 422
             +FL+CKIFRLHGSMK EDRR+TFQAFK+EKLALLLSTD+AARGLDFP VRCIIQYD P
Sbjct: 362 SEMFLRCKIFRLHGSMKQEDRRSTFQAFKTEKLALLLSTDVAARGLDFPKVRCIIQYDSP 421

Query: 423 GEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRG 482
           GEA EYVHRVGRTARLGE GDSLLFLQP E+DYLQDL  HGVSLTEYP++KVLDS  + G
Sbjct: 422 GEATEYVHRVGRTARLGEMGDSLLFLQPVEVDYLQDLGKHGVSLTEYPILKVLDSLLLHG 481

Query: 483 RKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 542
           + H  +KFVSLE H W++ +Q+A+ESFI+ +P M KLAQ AF SWVRAYTAHRG+LKRIF
Sbjct: 482 QTHRTKKFVSLELHPWVLSVQKALESFISVQPRMNKLAQNAFISWVRAYTAHRGDLKRIF 541

Query: 543 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           +V+KLHLGHVAKSFALKQQPS+VGKSF+KQ KKRKR  KQ   S K++
Sbjct: 542 MVQKLHLGHVAKSFALKQQPSLVGKSFQKQSKKRKRDQKQKGLSKKRK 588

BLAST of Cp4.1LG11g11980 vs. TrEMBL
Match: F6HGM8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00630 PE=3 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 5.5e-228
Identity = 410/598 (68.56%), Postives = 478/598 (79.93%), Query Frame = 1

Query: 1   MNEGMKTTTKKMVK--------EDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQ 60
           M+   +TT ++M K        E EIFASC+F+SLGLH TLCD+LR++MGFEVPT+VQA+
Sbjct: 1   MDRRKRTTEEEMKKTKQNSYNGESEIFASCSFSSLGLHPTLCDQLRERMGFEVPTIVQAE 60

Query: 61  AIPAILSGRHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQ 120
           AIP IL+GRHVLVNAATGTGKT+AYL P+I+HL K D RI+R+ GTF+LVLVPTRELCMQ
Sbjct: 61  AIPVILAGRHVLVNAATGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQ 120

Query: 121 VYETLQKLLHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYS 180
           VYE LQKLLHR+HWIVPGY+ GGE+RSKEKARLRKGISILVATPGRLLDHLKNTSSFL++
Sbjct: 121 VYEILQKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHT 180

Query: 181 NLHWIVFDEADRIFELGCGKEVEEILDHLGSRKN--IVNKDNGTSSFEFPQQNLLFSATL 240
           NL WI+FDEADRI ELG GKE+EEILD LGSR N   + +D  TS  EF +QNLL SATL
Sbjct: 181 NLRWIIFDEADRILELGFGKEIEEILDLLGSRTNGPTIREDAVTS--EFQRQNLLLSATL 240

Query: 241 NEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRK-EKNLIADY 300
           NEKVN  A+ISLENP+ IGLD G       P EH   +  D++++++   K       DY
Sbjct: 241 NEKVNHLAQISLENPVTIGLD-GKKMQPKPPLEHFGSVEFDVDEDSEKLHKIISPSNGDY 300

Query: 301 KIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKF 360
           K+P QLVQ YV+ PC SRL VL S+LK+LFER+  +K +V FSTCDAVDFHYSLF  F +
Sbjct: 301 KLPAQLVQRYVKVPCGSRLVVLLSILKHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLW 360

Query: 361 SSS-ESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPN 420
            ++   E     +FL+ K F+LHG+MK EDRRTTFQ FK EK ALLLSTD+AARGLDFP 
Sbjct: 361 PANLHPETEDRQMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPK 420

Query: 421 VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLV 480
           VRCIIQYD PGEA EYVHRVGRTARLGERGDSLLFLQP E+DYLQDL  HGVSLTEY L+
Sbjct: 421 VRCIIQYDSPGEASEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLL 480

Query: 481 KVLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT 540
           KVLDSFP+ G+KH ++KF+SLE H W ++LQ+A+ESFI AEP M KLA+ AFCSWVRAYT
Sbjct: 481 KVLDSFPLSGQKHHIKKFISLEMHPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYT 540

Query: 541 AHRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           AHRGELKRIF VKKLHLGHVAKSFALK QPS+VGKS + Q KKRKR  KQ   S +K+
Sbjct: 541 AHRGELKRIFQVKKLHLGHVAKSFALKDQPSLVGKSMQMQTKKRKRDQKQQGLSKRKK 595

BLAST of Cp4.1LG11g11980 vs. TrEMBL
Match: A0A061FZ38_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_045471 PE=3 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 5.6e-225
Identity = 400/583 (68.61%), Postives = 476/583 (81.65%), Query Frame = 1

Query: 6   KTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLV 65
           K + K   K  EIFASC+F+SLGLH+TLCD+LR+++GFE PTLVQAQ+IP ILSGRHVLV
Sbjct: 14  KMSKKSNSKGSEIFASCSFSSLGLHSTLCDQLRERLGFEAPTLVQAQSIPVILSGRHVLV 73

Query: 66  NAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYH 125
           NA TG+GKT+AYL PI+HHLQ    RI+R+ GTF+LVLVPTRELCMQVYE LQKLLHR+H
Sbjct: 74  NAETGSGKTIAYLAPIVHHLQGYSPRIERSHGTFALVLVPTRELCMQVYEILQKLLHRFH 133

Query: 126 WIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRI 185
           WIVPGY+ GGE+R+KEKARLRKGISIL+ATPGRLLDHLK+TSSF++++L WI+FDEADRI
Sbjct: 134 WIVPGYVMGGENRNKEKARLRKGISILIATPGRLLDHLKHTSSFVHTSLRWIIFDEADRI 193

Query: 186 FELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENP 245
            ELG GK++EEILD LGS+ N  +   G SS EF +QNLL SATLNEKVN  AKISLENP
Sbjct: 194 LELGFGKDIEEILDLLGSKAN-ESAHKGKSS-EFQRQNLLLSATLNEKVNHLAKISLENP 253

Query: 246 IMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRK-EKNLIADYKIPTQLVQSYVQAPC 305
           +MIGLD  N  ++    +  R LG D ++E   + K   +   DYK+P QLVQ YV+ PC
Sbjct: 254 VMIGLD--NTKMQNPSLDQTRSLGSDEDEELDNSSKLVSSSSGDYKLPAQLVQRYVKVPC 313

Query: 306 ASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSS-SESEPRSEHLFL 365
            SRLAVL S+LK+LFER+  +K +V FSTCDAVD HYSL   F++S  S+ E   +  FL
Sbjct: 314 GSRLAVLLSILKHLFERETSQKIVVFFSTCDAVDLHYSLLSEFQWSPYSQFEAELKQKFL 373

Query: 366 KCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIE 425
           KCK FRLHG+MK EDRRTTF AFK+EK ALL+STD+AARGLDFP VRCIIQYD PGEA E
Sbjct: 374 KCKTFRLHGNMKQEDRRTTFSAFKTEKSALLVSTDVAARGLDFPKVRCIIQYDSPGEATE 433

Query: 426 YVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFV 485
           YVHRVGRTARLGERG+SLLFLQP E+DYLQDL  HGVSLTEYPL+K+LDSFP+ G+ H V
Sbjct: 434 YVHRVGRTARLGERGESLLFLQPIEVDYLQDLEKHGVSLTEYPLLKILDSFPLHGQTHRV 493

Query: 486 EKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKL 545
           +KFV LESH W++ LQ+ +ES+I +EP + KLA+ AFCSWVRAYTAHRG+LKRIF+VKKL
Sbjct: 494 KKFVLLESHPWVVSLQKELESYILSEPKIKKLAKNAFCSWVRAYTAHRGDLKRIFMVKKL 553

Query: 546 HLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           HLGHVAKSFALK+QPS+VGKSF+ Q KKRKR  +Q +   KKR
Sbjct: 554 HLGHVAKSFALKEQPSLVGKSFQNQSKKRKRDQRQ-MGLHKKR 591

BLAST of Cp4.1LG11g11980 vs. TrEMBL
Match: W9QTM4_9ROSA (DEAD-box ATP-dependent RNA helicase 17 OS=Morus notabilis GN=L484_004088 PE=3 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 9.6e-225
Identity = 401/582 (68.90%), Postives = 470/582 (80.76%), Query Frame = 1

Query: 8   TTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNA 67
           TTKK  K D IFASC+F+SLGLH TLC +LR++MGFE PT VQAQAIP ILSGRHVLVNA
Sbjct: 16  TTKKTTKND-IFASCSFSSLGLHPTLCGQLRERMGFEAPTQVQAQAIPVILSGRHVLVNA 75

Query: 68  ATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWI 127
           +TG+GKTVAYL P+IHHLQ  + R+QR+DGTF+LVLVPTRELC+QV+E LQKLLHR+HWI
Sbjct: 76  STGSGKTVAYLAPVIHHLQNYNPRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWI 135

Query: 128 VPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFE 187
           VPGY+ GGESRSKEKARLRKGISILVATPGRLLDHLKNTSSF+YSNL WI+FDEADRI E
Sbjct: 136 VPGYVMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFMYSNLRWIIFDEADRILE 195

Query: 188 LGCGKEVEEILDHLGSRKN-IVNKDNGTSSF-EFPQQNLLFSATLNEKVNCFAKISLENP 247
           LG GKE+EEILD LGSR++  +NKD   SS  EF +QNLL SATLN+KVN  AKISLENP
Sbjct: 196 LGFGKEIEEILDLLGSRQHGSMNKDATVSSTSEFERQNLLLSATLNDKVNHLAKISLENP 255

Query: 248 IMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCA 307
           +MIGL+         P EH   LG D  D     +     + DY +P+QL Q YV+ PC 
Sbjct: 256 VMIGLEDKRMQPSSSP-EHLGSLGSDREDTDYTFKITGPSVEDYNLPSQLNQRYVKVPCN 315

Query: 308 SRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSS-SESEPRSEHLFLK 367
           +RLAVL S+LK L+ERD  +K +V FSTCDAVDFH+SL   F++S  S+ E   + +FLK
Sbjct: 316 ARLAVLLSILKNLYERDASQKVVVFFSTCDAVDFHFSLLSEFQYSPYSQPEAELKQMFLK 375

Query: 368 CKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEY 427
           CK   LHG MK EDR+TTFQAFK+EK ALLLSTD+AARGLDFP VRCI+QYD PGEA EY
Sbjct: 376 CKTLCLHGKMKLEDRKTTFQAFKTEKSALLLSTDVAARGLDFPKVRCIVQYDSPGEATEY 435

Query: 428 VHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVE 487
           VHRVGRTARLGE+GDSLLFLQP E+DYL DL  HGVSLTEY L KVLDSFP+ G KH V+
Sbjct: 436 VHRVGRTARLGEKGDSLLFLQPVEMDYLHDLEKHGVSLTEYQLSKVLDSFPLYGEKHRVK 495

Query: 488 KFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLH 547
           KF+S+ESH W++ +QRA+E+FI A+P + +LAQK FCSWVRAYTAHRGELKRIF+VKKLH
Sbjct: 496 KFISIESHPWVVSMQRALEAFIVAQPKLKQLAQKGFCSWVRAYTAHRGELKRIFMVKKLH 555

Query: 548 LGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           LGHVAKSFALK+QPS+V +S +++  KRKR  KQ   S K++
Sbjct: 556 LGHVAKSFALKEQPSLVNRSLQRETMKRKRDEKQKGLSKKRK 595

BLAST of Cp4.1LG11g11980 vs. TAIR10
Match: AT2G40700.1 (AT2G40700.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 708.8 bits (1828), Expect = 2.9e-204
Identity = 360/573 (62.83%), Postives = 439/573 (76.61%), Query Frame = 1

Query: 18  IFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAY 77
           +FASC+F+SLGL   L D+L+++MGFE PTLVQAQAIP ILSGR VLVNA TGTGKT+AY
Sbjct: 25  LFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAY 84

Query: 78  LVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGES 137
           L P+IHHLQ    ++ R+ GTF+LV+VPTRELC+QVYETL+KLLHR+HWIVPGY+ GGE 
Sbjct: 85  LAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEK 144

Query: 138 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 197
           ++KEKARLRKGISIL+ATPGRLLDHLKNT+SF++ NL W++FDEAD I ELG GKE+E+I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204

Query: 198 LDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNAL 257
           +  LGS +N   +++        +QNLL SATLN+KVN  AK+SL++P+MIGLD  N  L
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLD--NTKL 264

Query: 258 EFQPS-EHGRFLGHDINDEAQPTRKEKN-LIADYKIPTQLVQSYVQAPCASRLAVLFSVL 317
           +   S E       D  D      K  N L  DY IP+QLVQ Y++ PC +RL  L SVL
Sbjct: 265 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 324

Query: 318 KYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKF--SSSESEPRSEHLFLKCKIFRLHGS 377
           K LFER+  +K +V FST DAVDFHYSL   F++  +S   E  ++ LFLKCK FRLHGS
Sbjct: 325 KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGS 384

Query: 378 MKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTAR 437
           M+ EDRR+ F  FK+EK A+LLSTD+AARGLDFP VRCIIQYD PGEA EYVHRVGRTAR
Sbjct: 385 MEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 444

Query: 438 LGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHS 497
           +GE+G++LLFLQP EIDYL++L+ HG SLTEYPL+KVLD FP+ G    ++K +SLESH 
Sbjct: 445 IGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIKKVLSLESHP 504

Query: 498 WIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFA 557
           W++ LQRA+ES   AEP M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFA
Sbjct: 505 WVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFA 564

Query: 558 LKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           L++QPS+VGKS  K+  KRKR  +Q     KKR
Sbjct: 565 LREQPSLVGKSHHKETMKRKRDERQKGQQGKKR 595

BLAST of Cp4.1LG11g11980 vs. TAIR10
Match: AT5G65900.1 (AT5G65900.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-70
Identity = 186/555 (33.51%), Postives = 279/555 (50.27%), Query Frame = 1

Query: 10  KKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAAT 69
           +K ++E  I  + TF SL L       +++ MGF   T +QA+AIP ++ G  VL  A T
Sbjct: 142 EKKLEETSIMTNKTFESLSLSDNTYKSIKE-MGFARMTQIQAKAIPPLMMGEDVLGAART 201

Query: 70  GTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVP 129
           G+GKT+A+L+P +  L +   +    +GT  LV+ PTREL +Q Y   ++LL +YH    
Sbjct: 202 GSGKTLAFLIPAVELLYRV--KFTPRNGTGVLVICPTRELAIQSYGVAKELL-KYHSQTV 261

Query: 130 GYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELG 189
           G + GGE R  E   L KG+++LVATPGRLLDHL+NT+ F++ NL ++V DEADRI E  
Sbjct: 262 GKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQN 321

Query: 190 CGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIG 249
             +++++IL       N++ K   TS         LFSAT + KV   A++SL +P+ I 
Sbjct: 322 FEEDLKKIL-------NLLPKTRQTS---------LFSATQSAKVEDLARVSLTSPVYI- 381

Query: 250 LDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLA 309
                                D+++  +    E            L Q Y   P A RL 
Sbjct: 382 ---------------------DVDEGRKEVTNEG-----------LEQGYCVVPSAMRLL 441

Query: 310 VLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFR 369
            L + LK    +   +K +V FSTC +  FH  LF   KF   E                
Sbjct: 442 FLLTFLKRFQGK---KKIMVFFSTCKSTKFHAELFRYIKFDCLE---------------- 501

Query: 370 LHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVG 429
           + G +    R  TF  F   +  +LL T++AARGLDFP+V  I+QYDPP    +Y+HRVG
Sbjct: 502 IRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVG 561

Query: 430 RTAR-LGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVS 489
           RTAR  G +G +LL L P E+ ++Q L+   + + E+                F EK   
Sbjct: 562 RTARGEGAKGKALLVLTPQELKFIQYLKAAKIPVEEH---------------EFEEK--- 599

Query: 490 LESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHV 549
                 ++ ++  VE+ I+    + + A++A+ +++  Y +H   +K +F V +L+L  V
Sbjct: 622 -----KLLDVKPFVENLISENYALKESAKEAYKTYISGYDSH--SMKDVFNVHQLNLTEV 599

Query: 550 AKSFALKQQPSVVGK 564
           A SF     P V  K
Sbjct: 682 ATSFGFSDPPKVALK 599

BLAST of Cp4.1LG11g11980 vs. TAIR10
Match: AT3G18600.1 (AT3G18600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-65
Identity = 189/568 (33.27%), Postives = 275/568 (48.42%), Query Frame = 1

Query: 18  IFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAY 77
           I  + TF SL L       +++ MGF+  T +QA +I  +L G+ VL  A TG+GKT+A+
Sbjct: 85  IMTNVTFDSLDLSEQTSIAIKE-MGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAF 144

Query: 78  LVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGES 137
           L+P +  L K   R    +GT  +V+ PTREL +Q     ++LL ++H      + GG +
Sbjct: 145 LIPAVELLFKE--RFSPRNGTGVIVICPTRELAIQTKNVAEELL-KHHSQTVSMVIGGNN 204

Query: 138 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 197
           R  E  R+  G ++++ATPGRLLDHL+NT +F+Y +L  +V DEADRI E    +++ +I
Sbjct: 205 RRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKI 264

Query: 198 LDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNAL 257
           L  L   +                Q  LFSAT   KV   A++SL +P+           
Sbjct: 265 LKILPKTR----------------QTALFSATQTSKVKDLARVSLTSPVH---------- 324

Query: 258 EFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSVLKY 317
                        D++D  +    E            L Q Y   P   RL +L S LK 
Sbjct: 325 ------------VDVDDGRRKVTNEG-----------LEQGYCVVPSKQRLILLISFLK- 384

Query: 318 LFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFRLHGSMKPE 377
              ++  +K +V FSTC +V FH  +    K S  +             +  +HG M   
Sbjct: 385 ---KNLNKKIMVFFSTCKSVQFHTEIM---KISDVD-------------VSDIHGGMDQN 444

Query: 378 DRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTAR-LGE 437
            R  TF  F   K  +LL TD+AARGLD P+V  IIQYDPP +  EY+HRVGRTAR  G 
Sbjct: 445 RRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGA 504

Query: 438 RGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHSWIM 497
           +G +LL L P E+ +++ L+   V + E                 F EK +S        
Sbjct: 505 KGKALLVLIPEELQFIRYLKAAKVPVKEL---------------EFNEKRLS-------- 554

Query: 498 FLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQ 557
            +Q A+E  +A +  + KLA+ A+ +++ AY +H   LK IF V +L L  VA+SF    
Sbjct: 565 NVQSALEKCVAKDYNLNKLAKDAYRAYLSAYNSH--SLKDIFNVHRLDLLAVAESFCFSS 554

Query: 558 QPSV---VGKSFKKQEKKRKRYPKQDVS 582
            P V   +     K  K RK+  +   S
Sbjct: 625 PPKVNLNIESGAGKVRKARKQQGRNGFS 554

BLAST of Cp4.1LG11g11980 vs. TAIR10
Match: AT5G05450.1 (AT5G05450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-47
Identity = 126/430 (29.30%), Postives = 202/430 (46.98%), Query Frame = 1

Query: 36  ELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRA 95
           E  ++  FE  T VQA  IP + S + V V+AATG+GKT+A++VP++  L++S     + 
Sbjct: 29  EALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKP 88

Query: 96  DGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGG-ESRSKEKARLRKGISILVA 155
                +++ PTREL  Q+Y   Q  +     +    + GG E ++  K    +G ++L+ 
Sbjct: 89  HQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIG 148

Query: 156 TPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIVNKDNGT 215
           TPGRL D ++      + NL  ++ DEADR+ E+G  ++V  I+  L  ++         
Sbjct: 149 TPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQR--------- 208

Query: 216 SSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDIND 275
                  +  LFSAT  E V   AK  L NP+ + + A + +   Q              
Sbjct: 209 -------RTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQ------------- 268

Query: 276 EAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTC 335
                      + + K P+ L   Y++     + + L  +L     ++  +K +V F TC
Sbjct: 269 -----------LTNSKTPSGLHLEYMECEADKKSSQLVDLLI----KNSDKKLIVFFMTC 328

Query: 336 DAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALL 395
            +VD+   +        S S            +  +HG MK   R     +F       L
Sbjct: 329 ASVDYWGLVLSKIPALKSIS------------LIPIHGDMKQNARDKALASFTKASSGAL 388

Query: 396 LSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQD 455
           L TD+AARGLD P +  ++QYDPP +   + HR GRTARLG +G +++FL P E  Y++ 
Sbjct: 389 LCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLPKEEAYVEF 402

Query: 456 LRNHGVSLTE 465
           +R   V L E
Sbjct: 449 MRIRRVPLEE 402

BLAST of Cp4.1LG11g11980 vs. TAIR10
Match: AT5G51280.1 (AT5G51280.1 DEAD-box protein abstrakt, putative)

HSP 1 Score: 169.9 bits (429), Expect = 4.8e-42
Identity = 123/449 (27.39%), Postives = 204/449 (45.43%), Query Frame = 1

Query: 24  FASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAYLVPIIH 83
           F  +     + D L++K G   PT +Q Q +P IL+GR ++  A TG+GKT+ +++P+I 
Sbjct: 148 FKDMKFPRPVLDTLKEK-GIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIM 207

Query: 84  HLQKSDRR--IQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGY-------ITG 143
              + +    I   +G   L++ P+REL  Q YE +++ +     +  GY         G
Sbjct: 208 IALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPL--VEAGYPPLRSLLCIG 267

Query: 144 GESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEV 203
           G     +   +++G+ I+VATPGRL D L      L     ++  DEADR+ +LG   ++
Sbjct: 268 GIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSL-DACRYLTLDEADRLVDLGFEDDI 327

Query: 204 EEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGN 263
            E+ DH                F+  +Q LLFSAT+  K+  FA+ +L  P+ + +    
Sbjct: 328 REVFDH----------------FKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAG 387

Query: 264 NALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSV 323
            A              D+  E +  ++E  ++                            
Sbjct: 388 AA------------NLDVIQEVEYVKQEAKIV---------------------------- 447

Query: 324 LKYLFERDCFEKT---LVLF--STCDAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFR 383
             YL E  C +KT   +++F  +  D  D H  L                 L    +   
Sbjct: 448 --YLLE--CLQKTSPPVLIFCENKADVDDIHEYL-----------------LLKGVEAVA 507

Query: 384 LHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVG 443
           +HG    EDR     +FK+ K  +L++TD+A++GLDFP+++ +I YD P E   YVHR+G
Sbjct: 508 IHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIG 515

Query: 444 RTARLGERGDSLLFLQPTEID-YLQDLRN 458
           RT R G+ G +  F+   + +  L DL++
Sbjct: 568 RTGRCGKTGIATTFINKNQSETTLLDLKH 515

BLAST of Cp4.1LG11g11980 vs. NCBI nr
Match: gi|659071479|ref|XP_008460014.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucumis melo])

HSP 1 Score: 1060.1 bits (2740), Expect = 1.4e-306
Identity = 540/590 (91.53%), Postives = 554/590 (93.90%), Query Frame = 1

Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           +NEG+KTT KKMVKE EIFASCTFASLGL  TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 8   INEGVKTTAKKMVKEGEIFASCTFASLGLDPTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKS RR QRADGTF+LVLVPTRELCMQVYE+LQKL
Sbjct: 68  RHVLVNAATGTGKTVAYLVPIIHHLQKSTRRTQRADGTFALVLVPTRELCMQVYESLQKL 127

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           L RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 128 LQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSATLNEKVNCFAK 240
           EADRIFELGCGKEVEEILDHLGSR+NI V KDN  SSF FPQQNLLFSATLNEKV  FAK
Sbjct: 188 EADRIFELGCGKEVEEILDHLGSRRNIHVKKDNAISSFGFPQQNLLFSATLNEKVIHFAK 247

Query: 241 ISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQS 300
           ISLENPIMIGLDAG++ALEFQPSE GRFLG DINDE QP RKEK+  IADYKIPTQLVQS
Sbjct: 248 ISLENPIMIGLDAGDSALEFQPSERGRFLGQDINDEVQPIRKEKSFSIADYKIPTQLVQS 307

Query: 301 YVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRS 360
           YVQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE R 
Sbjct: 308 YVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRP 367

Query: 361 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPP 420
           EHLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPP
Sbjct: 368 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPP 427

Query: 421 GEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRG 480
           GEAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLVKVLDSFP RG
Sbjct: 428 GEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVLDSFPARG 487

Query: 481 RKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 540
           RK FVEK VSLESHSWIMFLQRAVESF+AAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF
Sbjct: 488 RKQFVEKLVSLESHSWIMFLQRAVESFVAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 547

Query: 541 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           VVKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  +QDVSSSKKRTL
Sbjct: 548 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSRQDVSSSKKRTL 597

BLAST of Cp4.1LG11g11980 vs. NCBI nr
Match: gi|449446634|ref|XP_004141076.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 17 [Cucumis sativus])

HSP 1 Score: 1059.7 bits (2739), Expect = 1.9e-306
Identity = 541/589 (91.85%), Postives = 554/589 (94.06%), Query Frame = 1

Query: 2   NEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGR 61
           NEG+KTTTKKMVKE E+FASCTFASLGL +TLCD+LRDKMGFEVPTLVQAQAIPAILS R
Sbjct: 9   NEGVKTTTKKMVKEGEVFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRR 68

Query: 62  HVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLL 121
           HVLVNAATGTGKTVAYLVPIIHHLQKS RR QRADGTF+LVLVPTRELCMQVYE+LQKLL
Sbjct: 69  HVLVNAATGTGKTVAYLVPIIHHLQKSARRTQRADGTFALVLVPTRELCMQVYESLQKLL 128

Query: 122 HRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDE 181
            RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDE
Sbjct: 129 QRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDE 188

Query: 182 ADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 241
           ADRIFELGCGKEVEEILDHLGSRKNI VNKDN  SSF FPQQNLLFSATLNEKV  FAKI
Sbjct: 189 ADRIFELGCGKEVEEILDHLGSRKNIHVNKDNAISSFGFPQQNLLFSATLNEKVTHFAKI 248

Query: 242 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQSY 301
           SLENPIMIGLDAGN+ALEFQP+E GRFL HDINDE  P +KE N  IADYKIP+QLVQSY
Sbjct: 249 SLENPIMIGLDAGNSALEFQPTERGRFLEHDINDEVHPIQKENNFSIADYKIPSQLVQSY 308

Query: 302 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 361
           VQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFGGFKFSS ESE R E
Sbjct: 309 VQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGGFKFSS-ESESRPE 368

Query: 362 HLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 421
           HLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPPG
Sbjct: 369 HLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPG 428

Query: 422 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGR 481
           EAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLVKVLDSFPVRGR
Sbjct: 429 EAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVLDSFPVRGR 488

Query: 482 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 541
           K FVEK VSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRG LKRIFV
Sbjct: 489 KQFVEKLVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGALKRIFV 548

Query: 542 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           VKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKRTL
Sbjct: 549 VKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 596

BLAST of Cp4.1LG11g11980 vs. NCBI nr
Match: gi|659071481|ref|XP_008460023.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X2 [Cucumis melo])

HSP 1 Score: 882.5 bits (2279), Expect = 4.1e-253
Identity = 473/592 (79.90%), Postives = 490/592 (82.77%), Query Frame = 1

Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           +NEG+KTT KKMVKE EIFASCTFASLGL  TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 8   INEGVKTTAKKMVKEGEIFASCTFASLGLDPTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLV--LVPTRELCMQVYETLQ 120
           RHV                            +  A GT   V  LVP       +   LQ
Sbjct: 68  RHV---------------------------LVNAATGTGKTVAYLVP-------IIHHLQ 127

Query: 121 KLLHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIV 180
           K                 +R  ++A    GISILVATPGRLLDHLKNTSSFLYSNLHWIV
Sbjct: 128 K----------------STRRTQRADGTFGISILVATPGRLLDHLKNTSSFLYSNLHWIV 187

Query: 181 FDEADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSATLNEKVNCF 240
           FDEADRIFELGCGKEVEEILDHLGSR+NI V KDN  SSF FPQQNLLFSATLNEKV  F
Sbjct: 188 FDEADRIFELGCGKEVEEILDHLGSRRNIHVKKDNAISSFGFPQQNLLFSATLNEKVIHF 247

Query: 241 AKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLV 300
           AKISLENPIMIGLDAG++ALEFQPSE GRFLG DINDE QP RKEK+  IADYKIPTQLV
Sbjct: 248 AKISLENPIMIGLDAGDSALEFQPSERGRFLGQDINDEVQPIRKEKSFSIADYKIPTQLV 307

Query: 301 QSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEP 360
           QSYVQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE 
Sbjct: 308 QSYVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESES 367

Query: 361 RSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYD 420
           R EHLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYD
Sbjct: 368 RPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYD 427

Query: 421 PPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPV 480
           PPGEAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLVKVLDSFP 
Sbjct: 428 PPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVLDSFPA 487

Query: 481 RGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKR 540
           RGRK FVEK VSLESHSWIMFLQRAVESF+AAEPGMMKLAQKAFCSWVRAYTAHRGELKR
Sbjct: 488 RGRKQFVEKLVSLESHSWIMFLQRAVESFVAAEPGMMKLAQKAFCSWVRAYTAHRGELKR 547

Query: 541 IFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           IFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  +QDVSSSKKRTL
Sbjct: 548 IFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSRQDVSSSKKRTL 549

BLAST of Cp4.1LG11g11980 vs. NCBI nr
Match: gi|700205376|gb|KGN60495.1| (hypothetical protein Csa_2G000040 [Cucumis sativus])

HSP 1 Score: 863.6 bits (2230), Expect = 2.0e-247
Identity = 442/480 (92.08%), Postives = 450/480 (93.75%), Query Frame = 1

Query: 111 MQVYETLQKLLHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFL 170
           MQVYE+LQKLL RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFL
Sbjct: 1   MQVYESLQKLLQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFL 60

Query: 171 YSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSAT 230
           YSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNI VNKDN  SSF FPQQNLLFSAT
Sbjct: 61  YSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIHVNKDNAISSFGFPQQNLLFSAT 120

Query: 231 LNEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IAD 290
           LNEKV  FAKISLENPIMIGLDAGN+ALEFQP+E GRFL HDINDE  P +KE N  IAD
Sbjct: 121 LNEKVTHFAKISLENPIMIGLDAGNSALEFQPTERGRFLEHDINDEVHPIQKENNFSIAD 180

Query: 291 YKIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFK 350
           YKIP+QLVQSYVQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFGGFK
Sbjct: 181 YKIPSQLVQSYVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGGFK 240

Query: 351 FSSSESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPN 410
           FSS ESE R EHLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP 
Sbjct: 241 FSS-ESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPK 300

Query: 411 VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLV 470
           VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLV
Sbjct: 301 VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLV 360

Query: 471 KVLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT 530
           KVLDSFPVRGRK FVEK VSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT
Sbjct: 361 KVLDSFPVRGRKQFVEKLVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT 420

Query: 531 AHRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           AHRG LKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKRTL
Sbjct: 421 AHRGALKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 479

BLAST of Cp4.1LG11g11980 vs. NCBI nr
Match: gi|643740762|gb|KDP46352.1| (hypothetical protein JCGZ_10192 [Jatropha curcas])

HSP 1 Score: 799.3 bits (2063), Expect = 4.6e-228
Identity = 406/588 (69.05%), Postives = 478/588 (81.29%), Query Frame = 1

Query: 3   EGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRH 62
           +G +   K++ K  EIFASC+F+SLGLH TLC+EL++++GFE PTLVQAQAIP +LSGRH
Sbjct: 2   KGEREEEKELNKNSEIFASCSFSSLGLHPTLCNELQERLGFEAPTLVQAQAIPVVLSGRH 61

Query: 63  VLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLH 122
           VLVNAATGTGKTVAYL PIIHHLQ    +I+R  GTF+LVLVPTRELC+QVYE LQKLLH
Sbjct: 62  VLVNAATGTGKTVAYLAPIIHHLQSYSPKIERNQGTFALVLVPTRELCIQVYEILQKLLH 121

Query: 123 RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEA 182
           R+HWIVPGY+ GGE R+KEKARLRKGISIL+ATPGRLLDHLKNTSSF++SNL WI+FDEA
Sbjct: 122 RFHWIVPGYVMGGEKRTKEKARLRKGISILIATPGRLLDHLKNTSSFMHSNLRWIIFDEA 181

Query: 183 DRIFELGCGKEVEEILDHLGSR-KNIVNKDNGTSSFEFPQ-QNLLFSATLNEKVNCFAKI 242
           DRI ELG G+E+E+ILD LGSR    V K N  SS    Q QNLL SATLNEKVN  AKI
Sbjct: 182 DRILELGFGQEIEQILDLLGSRLTEPVVKGNKVSSISTSQRQNLLLSATLNEKVNNLAKI 241

Query: 243 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQ-PTRKEKNLIADYKIPTQLVQSY 302
           SLENP+MIGLD     L+ Q  EH   +  + +DE + P++       DYK+P+QLVQ Y
Sbjct: 242 SLENPVMIGLDDKKMQLD-QLIEHTESVESNTDDELECPSKVTNPSTGDYKLPSQLVQKY 301

Query: 303 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFS-SSESEPRS 362
           V+ PC SRLAVL S+LK+LFE++  +K +V FSTCD VDFHYSL   F++S +S+SE   
Sbjct: 302 VKVPCGSRLAVLISILKHLFEKETSQKIVVFFSTCDGVDFHYSLLSDFRYSPNSQSEAEG 361

Query: 363 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPP 422
             +FL+CKIFRLHGSMK EDRR+TFQAFK+EKLALLLSTD+AARGLDFP VRCIIQYD P
Sbjct: 362 SEMFLRCKIFRLHGSMKQEDRRSTFQAFKTEKLALLLSTDVAARGLDFPKVRCIIQYDSP 421

Query: 423 GEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRG 482
           GEA EYVHRVGRTARLGE GDSLLFLQP E+DYLQDL  HGVSLTEYP++KVLDS  + G
Sbjct: 422 GEATEYVHRVGRTARLGEMGDSLLFLQPVEVDYLQDLGKHGVSLTEYPILKVLDSLLLHG 481

Query: 483 RKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 542
           + H  +KFVSLE H W++ +Q+A+ESFI+ +P M KLAQ AF SWVRAYTAHRG+LKRIF
Sbjct: 482 QTHRTKKFVSLELHPWVLSVQKALESFISVQPRMNKLAQNAFISWVRAYTAHRGDLKRIF 541

Query: 543 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           +V+KLHLGHVAKSFALKQQPS+VGKSF+KQ KKRKR  KQ   S K++
Sbjct: 542 MVQKLHLGHVAKSFALKQQPSLVGKSFQKQSKKRKRDQKQKGLSKKRK 588

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RH17_ARATH5.1e-20362.83DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana GN=RH17 PE=2 SV=1[more]
RH17_ORYSJ2.6e-19958.77DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica GN=Os05g0... [more]
DDX31_HUMAN4.7e-10839.90Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens GN=DDX31 PE=1 SV=2[more]
DDX31_MOUSE2.7e-10339.56Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus GN=Ddx31 PE=2 SV=2[more]
Y8611_DROME2.5e-9335.65Probable ATP-dependent RNA helicase CG8611 OS=Drosophila melanogaster GN=CG8611 ... [more]
Match NameE-valueIdentityDescription
A0A0A0LEQ9_CUCSA1.4e-24792.08Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000040 PE=3 SV=1[more]
A0A067LD87_JATCU3.2e-22869.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10192 PE=3 SV=1[more]
F6HGM8_VITVI5.5e-22868.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00630 PE=3 SV=... [more]
A0A061FZ38_THECC5.6e-22568.61P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform... [more]
W9QTM4_9ROSA9.6e-22568.90DEAD-box ATP-dependent RNA helicase 17 OS=Morus notabilis GN=L484_004088 PE=3 SV... [more]
Match NameE-valueIdentityDescription
AT2G40700.12.9e-20462.83 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT5G65900.11.1e-7033.51 DEA(D/H)-box RNA helicase family protein[more]
AT3G18600.11.1e-6533.27 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT5G05450.11.0e-4729.30 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT5G51280.14.8e-4227.39 DEAD-box protein abstrakt, putative[more]
Match NameE-valueIdentityDescription
gi|659071479|ref|XP_008460014.1|1.4e-30691.53PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucumis melo][more]
gi|449446634|ref|XP_004141076.1|1.9e-30691.85PREDICTED: DEAD-box ATP-dependent RNA helicase 17 [Cucumis sativus][more]
gi|659071481|ref|XP_008460023.1|4.1e-25379.90PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X2 [Cucumis melo][more]
gi|700205376|gb|KGN60495.1|2.0e-24792.08hypothetical protein Csa_2G000040 [Cucumis sativus][more]
gi|643740762|gb|KDP46352.1|4.6e-22869.05hypothetical protein JCGZ_10192 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR025313DUF4217
IPR014014RNA_helicase_DEAD_Q_motif
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR000629RNA-helicase_DEAD-box_CS
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0010501 RNA secondary structure unwinding
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009640 photomorphogenesis
biological_process GO:0000338 protein deneddylation
biological_process GO:0051604 protein maturation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0042991 transcription factor import into nucleus
biological_process GO:0008150 biological_process
biological_process GO:0006312 mitotic recombination
cellular_component GO:0005730 nucleolus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0004004 ATP-dependent RNA helicase activity
molecular_function GO:0005524 ATP binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g11980.1Cp4.1LG11g11980.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 178..186
scor
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 320..435
score: 4.4
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 357..435
score: 4.0
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 310..482
score: 17
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 48..234
score: 1.3
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 42..263
score: 1.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 54..248
score: 29
IPR014014RNA helicase, DEAD-box type, Q motifPROFILEPS51195Q_MOTIFcoord: 22..51
score: 9
IPR025313Domain of unknown function DUF4217PFAMPF13959DUF4217coord: 499..560
score: 3.2
IPR025313Domain of unknown function DUF4217SMARTSM01178DUF4217_3coord: 497..562
score: 3.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 288..458
score: 8.5E-36coord: 6..251
score: 8.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..248
score: 8.55E-58coord: 354..463
score: 5.72E-43coord: 60..122
score: 5.72
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 15..255
score: 7.2E-301coord: 291..349
score: 7.2E-301coord: 365..586
score: 7.2E
NoneNo IPR availablePANTHERPTHR24031:SF248DEAD-BOX ATP-DEPENDENT RNA HELICASE 17coord: 365..586
score: 7.2E-301coord: 15..255
score: 7.2E-301coord: 291..349
score: 7.2E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None