Cp4.1LG11g10260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g10260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTemperature-induced lipocalin
LocationCp4.1LG11 : 8717529 .. 8718877 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAATCACCACCGAACCCCGCAAATAAAACCCTTCTAAGGTATCTTTCAGAAACTCAACAATCAACAATGGCGAATAAAGAGATGGAAGTCATGAAGGACGTCGACCTTGAGAGGTACATGGGTCGGTGGTACGAAATAGCCTCATTTCCATCGAGGTTCCAGCCCAAAAATGGAGTTAATACCAGAGCGACCTACACCCTGAGAGACGAACGGACGGTGAATGTCCTAAATGAAACATGGGTTGATGGCAGGAGAAGTTTCATTGAGGGTACTGCTGTTAAAGCTAACCCTGATAGCAATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCTTGCCCATCATTCCTATTGTTGGAGATTACTGGATTTTGTATCTTGATCATGATTATCACCATGCTTTAATTGGCCAGCCTAGCAGAAACTATCTCTGGGTATGACTAATTTTCTCTCTGCAATACATATTTTGTGCTAGTTGGGCTATATTTAGACTGACCGCTAAATACTACAAGTTTCAAGTGTATTGCTAGTTGAGCTATATTTAGGTAACCGCTAAATACTACAAGTTTCAACACTTTAGGTGAACGCTAAATACTACAAGTTGAGCTACAAGTTTCAAGTGTATGGCTAGTTGAGCTATATTTAGGTTGCCTGTGAAATACTACAGGTTTCATTTCGAAACCCGATAGCCAAACTGTTGATTTTGGTGAAAAAGGATAATGGGATGTTTCTGAATTGTTCTTTGATGGTGTTTTCTTGACAGATATTGTGCAGGGAGAATCATTTGGATGAGGAGATATATAATGAACTAGTGGAGAAAGCTAAGGAACAAGGTTATGATGTGAGCAAGCTTCGTAGGACAACACACACTGACCCTCCAGAAGGGGATGAAGGTCCTAAAGATACTAAAGGAATATGGTGGATCAAATCAATGTTTGGAAAATGATCAAACTTTGAAGGAAAGTAAGTTGAATATTGTACCTTTGAGTTCAATGGGTTTGTTAAATTTCACCACTTTGGTTTGTATCCAGTGAAGATTTTGTGCTTGGTTTTGTGGAATGGTTGAAACGAGTCAGTCCTTTGTGCTGTGTGTATAGAGTCTCCCAGATATTGTATTTGCTGAATAGTTCTTTATGAAGCTGGGATTGTGAGCTCAACATTTTACTGTTGGACTGCCAGGTTCTGAACTTTCCCAGTCCTGTGAAGATGAAACTTGAATAGATATGCAATTTACTTGCATATAACCTGCAAACTTTTCTATGCGAAACTACAACTCTTCAGTTCAATATCAATAGGTTGATTGTTTCACAACCTATATCTTTCGAGAGGAAAAGAAGATCTCT

mRNA sequence

TCAAATCACCACCGAACCCCGCAAATAAAACCCTTCTAAGGTATCTTTCAGAAACTCAACAATCAACAATGGCGAATAAAGAGATGGAAGTCATGAAGGACGTCGACCTTGAGAGGTACATGGGTCGGTGGTACGAAATAGCCTCATTTCCATCGAGGTTCCAGCCCAAAAATGGAGTTAATACCAGAGCGACCTACACCCTGAGAGACGAACGGACGGTGAATGTCCTAAATGAAACATGGGTTGATGGCAGGAGAAGTTTCATTGAGGGTACTGCTGTTAAAGCTAACCCTGATAGCAATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCTTGCCCATCATTCCTATTGTTGGAGATTACTGGATTTTGTATCTTGATCATGATTATCACCATGCTTTAATTGGCCAGCCTAGCAGAAACTATCTCTGGATATTGTGCAGGGAGAATCATTTGGATGAGGAGATATATAATGAACTAGTGGAGAAAGCTAAGGAACAAGGTTATGATGTGAGCAAGCTTCGTAGGACAACACACACTGACCCTCCAGAAGGGGATGAAGGTCCTAAAGATACTAAAGGAATATGGTGGATCAAATCAATGTTTGGAAAATGATCAAACTTTGAAGGAAAGTAAGTTGAATATTGTACCTTTGAGTTCAATGGGTTTGTTAAATTTCACCACTTTGGTTTGTATCCAGTGAAGATTTTGTGCTTGGTTTTGTGGAATGGTTGAAACGAGTCAGTCCTTTGTGCTGTGTGTATAGAGTCTCCCAGATATTGTATTTGCTGAATAGTTCTTTATGAAGCTGGGATTGTGAGCTCAACATTTTACTGTTGGACTGCCAGGTTCTGAACTTTCCCAGTCCTGTGAAGATGAAACTTGAATAGATATGCAATTTACTTGCATATAACCTGCAAACTTTTCTATGCGAAACTACAACTCTTCAGTTCAATATCAATAGGTTGATTGTTTCACAACCTATATCTTTCGAGAGGAAAAGAAGATCTCT

Coding sequence (CDS)

ATGGCGAATAAAGAGATGGAAGTCATGAAGGACGTCGACCTTGAGAGGTACATGGGTCGGTGGTACGAAATAGCCTCATTTCCATCGAGGTTCCAGCCCAAAAATGGAGTTAATACCAGAGCGACCTACACCCTGAGAGACGAACGGACGGTGAATGTCCTAAATGAAACATGGGTTGATGGCAGGAGAAGTTTCATTGAGGGTACTGCTGTTAAAGCTAACCCTGATAGCAATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCTTGCCCATCATTCCTATTGTTGGAGATTACTGGATTTTGTATCTTGATCATGATTATCACCATGCTTTAATTGGCCAGCCTAGCAGAAACTATCTCTGGATATTGTGCAGGGAGAATCATTTGGATGAGGAGATATATAATGAACTAGTGGAGAAAGCTAAGGAACAAGGTTATGATGTGAGCAAGCTTCGTAGGACAACACACACTGACCCTCCAGAAGGGGATGAAGGTCCTAAAGATACTAAAGGAATATGGTGGATCAAATCAATGTTTGGAAAATGA

Protein sequence

MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDGRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKSMFGK
Homology
[Close]
BLAST of Cp4.1LG11g10260 vs. Swiss-Prot
Match: TIL_ARATH (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana GN=TIL PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.8e-75
Identity = 127/182 (69.78%), Postives = 156/182 (85.71%), Query Frame = 1 

Query: 4   KEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDGRR 63
           KEMEV+K +++ERYMGRWYEIASFPSRFQPKNGV+TRATYTL  + T++VLNETW +G+R
Sbjct: 5   KEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGKR 64

Query: 64  SFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYL 123
            FIEG+A KA+P S+EAKLKVKFYVPPFLPIIP+ GDYW+LY+D DY HALIGQPSR+YL
Sbjct: 65  GFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSYL 124

Query: 124 WILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKSMF 183
           WIL R   ++EE Y +LVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+F
Sbjct: 125 WILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSLF 184

Query: 184 GK 185
           GK
Sbjct: 185 GK 186

[Close]
BLAST of Cp4.1LG11g10260 vs. Swiss-Prot
Match: BLC_CITFR (Outer membrane lipoprotein Blc OS=Citrobacter freundii PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 56/153 (36.60%), Postives = 88/153 (57.52%), Query Frame = 1 

Query: 4   KEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDGRR 63
           K + V+ + D +RY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +   R 
Sbjct: 26  KGVTVVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGYNPDRE 85

Query: 64  SF--IEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRN 123
            +   EG A     D + A LKV F+ P +       G Y ++ LD +Y HAL+  P R+
Sbjct: 86  MWQKTEGKAYFTG-DPSTAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRD 145

Query: 124 YLWILCRENHLDEEIYNELVEKAKEQGYDVSKL 155
           YLWIL R   + +E+  +++  A  +G++V+KL
Sbjct: 146 YLWILSRTPTISDEMKQQMLAIATREGFEVNKL 169

[Close]
BLAST of Cp4.1LG11g10260 vs. Swiss-Prot
Match: BLC_ECO57 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.4e-19
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1 

Query: 8   VMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDGRRSF-- 67
           V+ + D +RY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +   R  +  
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 68  IEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYLWI 127
            EG A      +  A LKV F+ P +       G Y ++ LD +Y HAL+  P R+YLWI
Sbjct: 90  SEGKAYFTGAPTRAA-LKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRENHLDEEIYNELVEKAKEQGYDVSK 154
           L R   + +E+  E++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]
BLAST of Cp4.1LG11g10260 vs. Swiss-Prot
Match: BLC_ECOLI (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.4e-19
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1 

Query: 8   VMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDGRRSF-- 67
           V+ + D +RY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +   R  +  
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 68  IEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYLWI 127
            EG A      +  A LKV F+ P +       G Y ++ LD +Y HAL+  P R+YLWI
Sbjct: 90  SEGKAYFTGAPTRAA-LKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRENHLDEEIYNELVEKAKEQGYDVSK 154
           L R   + +E+  E++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]
BLAST of Cp4.1LG11g10260 vs. Swiss-Prot
Match: YR877_MIMIV (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = 1 

Query: 2   ANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDG 61
           + +++     +D++RYMG WYEIA  P+ FQ K  VN+ A Y L +   + V N   ++G
Sbjct: 18  SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEING 77

Query: 62  RRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVG--DYWILYLDHDYHHALIGQPS 121
           R + + GTA+ A       ++   F  P  L +    G   Y ++++D +Y +A++    
Sbjct: 78  RINSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGG 137

Query: 122 RNYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRR 157
            + LWIL R  ++++  YN+LV     QGYDV+ L R
Sbjct: 138 NDTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNLIR 168

[Close]
BLAST of Cp4.1LG11g10260 vs. TrEMBL
Match: A0A0A0LL45_CUCSA (Apolipoprotein d OS=Cucumis sativus GN=Csa_2G008710 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 7.4e-99
Identity = 169/185 (91.35%), Postives = 179/185 (96.76%), Query Frame = 1 

Query: 1   MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVD 60
           M   EM+VMKDVDL+RYMGRWYEIASFPSRFQPKNG NTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120
           G+R FIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEEIYN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SMFGK 185
           S+FGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Cp4.1LG11g10260 vs. TrEMBL
Match: Q38JC8_MEDTR (Temperature-induced lipocalin OS=Medicago truncatula GN=TIL PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.2e-84
Identity = 144/184 (78.26%), Postives = 165/184 (89.67%), Query Frame = 1 

Query: 1   MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVD 60
           MANKEM+V + VDL+RYMGRWYEIA FPSRFQP +G NTRATYTLRD+ TVNVLNETW  
Sbjct: 1   MANKEMDVARGVDLKRYMGRWYEIACFPSRFQPSDGKNTRATYTLRDDGTVNVLNETWSG 60

Query: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120
           G+RS+IEGTA KA+P+S+EAKLKVKFYVPP LPIIP+ GDYW+L+LDHDYH+ALIGQPSR
Sbjct: 61  GKRSYIEGTAYKADPNSDEAKLKVKFYVPPMLPIIPVTGDYWVLHLDHDYHYALIGQPSR 120

Query: 121 NYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 180
           NYLWILCR+ HLDEEIYNELV+KAKE+GYDVSKLR+T  +D P   EGP+DTKGIWW KS
Sbjct: 121 NYLWILCRQPHLDEEIYNELVQKAKEEGYDVSKLRKTPQSDTPPEQEGPEDTKGIWWFKS 180

Query: 181 MFGK 185
           +FGK
Sbjct: 181 LFGK 184

[Close]
BLAST of Cp4.1LG11g10260 vs. TrEMBL
Match: B9SBY6_RICCO (Apolipoprotein d, putative OS=Ricinus communis GN=RCOM_0700620 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.8e-84
Identity = 145/184 (78.80%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 2   ANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDG 61
           A  EMEV+K +D++RYMGRWYEIASFPSRFQPKNGVNTRATYTL ++ TV+VLNETW DG
Sbjct: 4   AKNEMEVVKGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDG 63

Query: 62  RRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRN 121
           +R +IEGTA KANP S+EAKLKVKFYVPPFLPIIP+VGDYW+LYLD DY +ALIGQPSRN
Sbjct: 64  KRGYIEGTAYKANPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYSYALIGQPSRN 123

Query: 122 YLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKS 181
           YLWILCR  HLD+EIYN+LVEKAKE+GYDVSKL +T  +D PPEG+EGPKDTKGIWWIKS
Sbjct: 124 YLWILCRRTHLDDEIYNQLVEKAKEEGYDVSKLHKTQQSDPPPEGEEGPKDTKGIWWIKS 183

Query: 182 MFGK 185
           + G+
Sbjct: 184 ILGR 187

[Close]
BLAST of Cp4.1LG11g10260 vs. TrEMBL
Match: A0A067L3I0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03997 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-83
Identity = 142/184 (77.17%), Postives = 168/184 (91.30%), Query Frame = 1 

Query: 2   ANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDG 61
           A KEMEV++ +D++RYMGRWYEIASFPSRFQPKNGVNTRATYTL ++ TV+VLNETW DG
Sbjct: 5   AKKEMEVVRGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDG 64

Query: 62  RRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRN 121
           +R  IEGTA KA+P S+EAKLKVKFYVPPFLPIIP+VGDYW+LY+D DY +ALIGQPSRN
Sbjct: 65  KRDSIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYIDEDYTYALIGQPSRN 124

Query: 122 YLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKS 181
           YLW+LCR+ HLD+EIYN+LVE+AKE+GYDVSKL +T  +D PPEG+EGPKDTKG+WWIKS
Sbjct: 125 YLWVLCRQTHLDDEIYNQLVERAKEEGYDVSKLHKTPQSDPPPEGEEGPKDTKGVWWIKS 184

Query: 182 MFGK 185
           +FGK
Sbjct: 185 LFGK 188

[Close]
BLAST of Cp4.1LG11g10260 vs. TrEMBL
Match: Q38JD5_POPBA (Temperature-induced lipocalin OS=Populus balsamifera GN=TIL' PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 3.7e-82
Identity = 142/181 (78.45%), Postives = 164/181 (90.61%), Query Frame = 1 

Query: 4   KEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDGRR 63
           KEMEV+K VDL+RYMGRWYEIASFPSRFQPKNGVNTRATYTL ++ TV+VLNETW DG+R
Sbjct: 5   KEMEVVKGVDLKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGKR 64

Query: 64  SFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYL 123
             IEG+A KA+P+S+EAKLKVKFYVPPFLPIIP+VGDYWILYLD DY +ALIGQPSR+YL
Sbjct: 65  GSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWILYLDDDYQYALIGQPSRSYL 124

Query: 124 WILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKSMFG 183
           WILCR+ H+++EIYN+LVEKAKE+GYDV KL +T  TDPP  +EGPKDTKGIWWIKS+ G
Sbjct: 125 WILCRKTHMEDEIYNQLVEKAKEEGYDVGKLHKTPQTDPPPEEEGPKDTKGIWWIKSILG 184

Query: 184 K 185
           K
Sbjct: 185 K 185

[Close]
BLAST of Cp4.1LG11g10260 vs. TAIR10
Match: AT5G58070.1 (AT5G58070.1 temperature-induced lipocalin)

HSP 1 Score: 282.7 bits (722), Expect = 1.6e-76
Identity = 127/182 (69.78%), Postives = 156/182 (85.71%), Query Frame = 1 

Query: 4   KEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDGRR 63
           KEMEV+K +++ERYMGRWYEIASFPSRFQPKNGV+TRATYTL  + T++VLNETW +G+R
Sbjct: 5   KEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGKR 64

Query: 64  SFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYL 123
            FIEG+A KA+P S+EAKLKVKFYVPPFLPIIP+ GDYW+LY+D DY HALIGQPSR+YL
Sbjct: 65  GFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSYL 124

Query: 124 WILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKSMF 183
           WIL R   ++EE Y +LVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+F
Sbjct: 125 WILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSLF 184

Query: 184 GK 185
           GK
Sbjct: 185 GK 186

[Close]
BLAST of Cp4.1LG11g10260 vs. NCBI nr
Match: gi|449443033|ref|XP_004139285.1| (PREDICTED: apolipoprotein D-like [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 1.1e-98
Identity = 169/185 (91.35%), Postives = 179/185 (96.76%), Query Frame = 1 

Query: 1   MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVD 60
           M   EM+VMKDVDL+RYMGRWYEIASFPSRFQPKNG NTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120
           G+R FIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEEIYN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SMFGK 185
           S+FGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Cp4.1LG11g10260 vs. NCBI nr
Match: gi|659070935|ref|XP_008457325.1| (PREDICTED: apolipoprotein D-like [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 1.8e-98
Identity = 169/185 (91.35%), Postives = 179/185 (96.76%), Query Frame = 1 

Query: 1   MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVD 60
           MA KEM+VMK VDL+RYMGRWYEIASFPSRFQPKNG NTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120
           G+R FIEGTAVK NPDS+EAKLKVKFYVPPFLPIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEEIYN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 181 SMFGK 185
           S+FGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Cp4.1LG11g10260 vs. NCBI nr
Match: gi|357480171|ref|XP_003610371.1| (temperature-induced lipocalin [Medicago truncatula])

HSP 1 Score: 318.5 bits (815), Expect = 7.4e-84
Identity = 144/184 (78.26%), Postives = 165/184 (89.67%), Query Frame = 1 

Query: 1   MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVD 60
           MANKEM+V + VDL+RYMGRWYEIA FPSRFQP +G NTRATYTLRD+ TVNVLNETW  
Sbjct: 1   MANKEMDVARGVDLKRYMGRWYEIACFPSRFQPSDGKNTRATYTLRDDGTVNVLNETWSG 60

Query: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120
           G+RS+IEGTA KA+P+S+EAKLKVKFYVPP LPIIP+ GDYW+L+LDHDYH+ALIGQPSR
Sbjct: 61  GKRSYIEGTAYKADPNSDEAKLKVKFYVPPMLPIIPVTGDYWVLHLDHDYHYALIGQPSR 120

Query: 121 NYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 180
           NYLWILCR+ HLDEEIYNELV+KAKE+GYDVSKLR+T  +D P   EGP+DTKGIWW KS
Sbjct: 121 NYLWILCRQPHLDEEIYNELVQKAKEEGYDVSKLRKTPQSDTPPEQEGPEDTKGIWWFKS 180

Query: 181 MFGK 185
           +FGK
Sbjct: 181 LFGK 184

[Close]
BLAST of Cp4.1LG11g10260 vs. NCBI nr
Match: gi|255565025|ref|XP_002523505.1| (PREDICTED: temperature-induced lipocalin-1 [Ricinus communis])

HSP 1 Score: 318.2 bits (814), Expect = 9.7e-84
Identity = 145/184 (78.80%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 2   ANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDG 61
           A  EMEV+K +D++RYMGRWYEIASFPSRFQPKNGVNTRATYTL ++ TV+VLNETW DG
Sbjct: 4   AKNEMEVVKGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDG 63

Query: 62  RRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRN 121
           +R +IEGTA KANP S+EAKLKVKFYVPPFLPIIP+VGDYW+LYLD DY +ALIGQPSRN
Sbjct: 64  KRGYIEGTAYKANPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYSYALIGQPSRN 123

Query: 122 YLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKS 181
           YLWILCR  HLD+EIYN+LVEKAKE+GYDVSKL +T  +D PPEG+EGPKDTKGIWWIKS
Sbjct: 124 YLWILCRRTHLDDEIYNQLVEKAKEEGYDVSKLHKTQQSDPPPEGEEGPKDTKGIWWIKS 183

Query: 182 MFGK 185
           + G+
Sbjct: 184 ILGR 187

[Close]
BLAST of Cp4.1LG11g10260 vs. NCBI nr
Match: gi|802592211|ref|XP_012071461.1| (PREDICTED: apolipoprotein D [Jatropha curcas])

HSP 1 Score: 317.0 bits (811), Expect = 2.2e-83
Identity = 142/184 (77.17%), Postives = 168/184 (91.30%), Query Frame = 1 

Query: 2   ANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVDG 61
           A KEMEV++ +D++RYMGRWYEIASFPSRFQPKNGVNTRATYTL ++ TV+VLNETW DG
Sbjct: 5   AKKEMEVVRGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDG 64

Query: 62  RRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRN 121
           +R  IEGTA KA+P S+EAKLKVKFYVPPFLPIIP+VGDYW+LY+D DY +ALIGQPSRN
Sbjct: 65  KRDSIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYIDEDYTYALIGQPSRN 124

Query: 122 YLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKS 181
           YLW+LCR+ HLD+EIYN+LVE+AKE+GYDVSKL +T  +D PPEG+EGPKDTKG+WWIKS
Sbjct: 125 YLWVLCRQTHLDDEIYNQLVERAKEEGYDVSKLHKTPQSDPPPEGEEGPKDTKGVWWIKS 184

Query: 182 MFGK 185
           +FGK
Sbjct: 185 LFGK 188

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g10260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIL_ARATH2.8e-7569.78Temperature-induced lipocalin-1 OS=Arabidopsis thaliana GN=TIL PE=1 SV=1[more]
BLC_CITFR2.2e-1936.60Outer membrane lipoprotein Blc OS=Citrobacter freundii PE=3 SV=1[more]
BLC_ECO578.4e-1937.84Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1[more]
BLC_ECOLI8.4e-1937.84Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1[more]
YR877_MIMIV1.3e-1632.48Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV... [more]
BLAST of Cp4.1LG11g10260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL45_CUCSA7.4e-9991.35Apolipoprotein d OS=Cucumis sativus GN=Csa_2G008710 PE=3 SV=1[more]
Q38JC8_MEDTR5.2e-8478.26Temperature-induced lipocalin OS=Medicago truncatula GN=TIL PE=2 SV=1[more]
B9SBY6_RICCO6.8e-8478.80Apolipoprotein d, putative OS=Ricinus communis GN=RCOM_0700620 PE=3 SV=1[more]
A0A067L3I0_JATCU1.5e-8377.17Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03997 PE=3 SV=1[more]
Q38JD5_POPBA3.7e-8278.45Temperature-induced lipocalin OS=Populus balsamifera GN=TIL' PE=2 SV=1[more]
BLAST of Cp4.1LG11g10260 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58070.11.6e-7669.78 temperature-induced lipocalin[more]
BLAST of Cp4.1LG11g10260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443033|ref|XP_004139285.1|1.1e-9891.35PREDICTED: apolipoprotein D-like [Cucumis sativus][more]
gi|659070935|ref|XP_008457325.1|1.8e-9891.35PREDICTED: apolipoprotein D-like [Cucumis melo][more]
gi|357480171|ref|XP_003610371.1|7.4e-8478.26temperature-induced lipocalin [Medicago truncatula][more]
gi|255565025|ref|XP_002523505.1|9.7e-8478.80PREDICTED: temperature-induced lipocalin-1 [Ricinus communis][more]
gi|802592211|ref|XP_012071461.1|2.2e-8377.17PREDICTED: apolipoprotein D [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR022272Lipocalin_CS
IPR022271Lipocalin_ApoD
IPR012674Calycin
IPR011038Calycin-like
IPR002446Lipocalin_bac
IPR000566Lipocln_cytosolic_FA-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0009416 response to light stimulus
biological_process GO:0009735 response to cytokinin
biological_process GO:0009408 response to heat
biological_process GO:0008150 biological_process
biological_process GO:0009628 response to abiotic stimulus
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005575 cellular_component
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005215 transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g10260.1Cp4.1LG11g10260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000566Lipocalin/cytosolic fatty-acid binding domainPFAMPF08212Lipocalin_2coord: 12..158
score: 3.6
IPR002446Lipocalin, bacterialPRINTSPR01171BCTLIPOCALINcoord: 106..114
score: 4.4E-8coord: 121..132
score: 4.4E-8coord: 12..26
score: 4.4E-8coord: 148..158
score: 4.
IPR011038Calycin-likeunknownSSF50814Lipocalinscoord: 5..164
score: 1.78
IPR012674CalycinGENE3DG3DSA:2.40.128.20coord: 4..161
score: 2.9
IPR022271Lipocalin, ApoD typePIRPIRSF036893Lipocalin_ApoDcoord: 1..169
score: 8.6
IPR022272Lipocalin family conserved sitePROSITEPS00213LIPOCALINcoord: 11..24
scor
NoneNo IPR availablePANTHERPTHR10612APOLIPOPROTEIN Dcoord: 1..182
score: 2.4
NoneNo IPR availablePANTHERPTHR10612:SF19SUBFAMILY NOT NAMEDcoord: 1..182
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g10260Cucsa.132560Cucumber (Gy14) v1cgycpeB0351
Cp4.1LG11g10260CmaCh12G011750Cucurbita maxima (Rimu)cmacpeB171
Cp4.1LG11g10260CmaCh05G012540Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g10260CmoCh11G004750Cucurbita moschata (Rifu)cmocpeB088
Cp4.1LG11g10260CmoCh05G012860Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g10260Cla016662Watermelon (97103) v1cpewmB116
Cp4.1LG11g10260Cla018714Watermelon (97103) v1cpewmB125
Cp4.1LG11g10260Csa1G268280Cucumber (Chinese Long) v2cpecuB093
Cp4.1LG11g10260Csa2G008710Cucumber (Chinese Long) v2cpecuB103
Cp4.1LG11g10260MELO3C010244Melon (DHL92) v3.5.1cpemeB087
Cp4.1LG11g10260MELO3C004486Melon (DHL92) v3.5.1cpemeB104
Cp4.1LG11g10260ClCG11G003530Watermelon (Charleston Gray)cpewcgB097
Cp4.1LG11g10260ClCG06G012210Watermelon (Charleston Gray)cpewcgB117
Cp4.1LG11g10260CSPI02G02200Wild cucumber (PI 183967)cpecpiB100
Cp4.1LG11g10260CSPI01G17460Wild cucumber (PI 183967)cpecpiB089
Cp4.1LG11g10260Lsi11G003660Bottle gourd (USVL1VR-Ls)cpelsiB074
Cp4.1LG11g10260MELO3C004486.2Melon (DHL92) v3.6.1cpemedB128
Cp4.1LG11g10260MELO3C010244.2Melon (DHL92) v3.6.1cpemedB110
Cp4.1LG11g10260CsaV3_1G028710Cucumber (Chinese Long) v3cpecucB0101
Cp4.1LG11g10260CsaV3_2G003400Cucumber (Chinese Long) v3cpecucB0114
Cp4.1LG11g10260Bhi06G001589Wax gourdcpewgoB0114
Cp4.1LG11g10260CsGy2G002300Cucumber (Gy14) v2cgybcpeB168
Cp4.1LG11g10260CsGy1G017650Cucumber (Gy14) v2cgybcpeB029
Cp4.1LG11g10260Carg10938Silver-seed gourdcarcpeB0809
Cp4.1LG11g10260Carg17470Silver-seed gourdcarcpeB0357
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG11g10260Cp4.1LG04g08960Cucurbita pepo (Zucchini)cpecpeB130
Cp4.1LG11g10260Cp4.1LG07g11060Cucurbita pepo (Zucchini)cpecpeB147
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g10260Silver-seed gourdcarcpeB0181
Cp4.1LG11g10260Cucurbita pepo (Zucchini)cpecpeB113
Cp4.1LG11g10260Cucurbita maxima (Rimu)cmacpeB074
Cp4.1LG11g10260Cucurbita moschata (Rifu)cmocpeB147
Cp4.1LG11g10260Melon (DHL92) v3.5.1cpemeB099
Cp4.1LG11g10260Cucumber (Gy14) v2cgybcpeB298
Cp4.1LG11g10260Melon (DHL92) v3.6.1cpemedB123