CSPI02G02200 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G02200
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Descriptiontemperature-induced lipocalin
LocationChr2 : 1519746 .. 1521084 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCCACAACCATAATATCTCTCCACGTCTCCCCTTTTCCCAAATCCACATATTCTTCTTCAATAAACCCAAAATTTTCAAATCAAATCACCACCGACTCCCTCAGAAAAAACCCACTGAGATCAATCGTCTCAGAAGCTCATCATACAACAATGGTGAAGACAGAGATGGATGTTATGAAGGATGTTGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCTTCTAGGTTTCAGCCGAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAAAGGACGGTGAATGTTCTAAATGAGACATGGGTTGATGGTAAGAGGGGTTTCATTGAAGGCACTGCTGTTAAAGCTAATCCTGACAGTGATGAAGCCAAGCTTAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATTATTCCTGTTGTTGGTGATTACTGGGTTTTGTATCTTGATCATGATTATCATCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGGTATGACATTGATTTTCTTCTTTGGCAGTTCGTTTTACTACTGGGTGATTGGTGAGATCAGAAAAGTGATGTCAATTCCCGTTTAGTTAGCAATTGATTTTCTATGGGTATGACATTGATTTTCTTTCGAGGAGTTTTTGGATGCTTGTGAACTGTTACAGGTTTGATGTTGTGGGTGGGAGATTTGAACCTTTAAACAACCAAAGGGGTGTTGAGTTATGATAAGTGGGAGATTCTGAATTGTGATTTCATGGTGTTTCTTTTGACAGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAATTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGTAGGACAACACATACTGATCCTCCACCAGAAGGAGATGAAGGCCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGATCAAGGTTTGAAGAAGAGTTAAATTGAATTTTGTACCATTGAGTTCAATGGTTTTGGTAAATTTCCCCACTTTGGTTTGTATCCAGTGAAGATTTTGTGCTTGGTTTTGTCGAATGGTTGAAACGAATCCTTTGTGCTGTTCGTATAGAGTCTTCCAGATACTGTATTAGATGAATAATTTATGATGAAGCTGGGTTGTGAGCTCTCCACATTTTCCTTTTAGACTGCCTGATTCTGAAGTTTCATAATACTGAAAATGAAATTTGAGGAGAGATGCAATTTATTTACTCAAAGTTTAACCTGTGGCTGAGCCTTTCTGTGCAAAACAAAACTATAACAGTTTTCAGTTCGCATATCTTG

mRNA sequence

ATGGTGAAGACAGAGATGGATGTTATGAAGGATGTTGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCTTCTAGGTTTCAGCCGAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAAAGGACGGTGAATGTTCTAAATGAGACATGGGTTGATGGTAAGAGGGGTTTCATTGAAGGCACTGCTGTTAAAGCTAATCCTGACAGTGATGAAGCCAAGCTTAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATTATTCCTGTTGTTGGTGATTACTGGGTTTTGTATCTTGATCATGATTATCATCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAATTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGTAGGACAACACATACTGATCCTCCACCAGAAGGAGATGAAGGCCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGA

Coding sequence (CDS)

ATGGTGAAGACAGAGATGGATGTTATGAAGGATGTTGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCTTCTAGGTTTCAGCCGAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAAAGGACGGTGAATGTTCTAAATGAGACATGGGTTGATGGTAAGAGGGGTTTCATTGAAGGCACTGCTGTTAAAGCTAATCCTGACAGTGATGAAGCCAAGCTTAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATTATTCCTGTTGTTGGTGATTACTGGGTTTTGTATCTTGATCATGATTATCATCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAATTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGTAGGACAACACATACTGATCCTCCACCAGAAGGAGATGAAGGCCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGA
Homology
[Close]
BLAST of CSPI02G02200 vs. Swiss-Prot
Match: TIL_ARATH (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana GN=TIL PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.4e-77
Identity = 129/183 (70.49%), Postives = 156/183 (85.25%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K ++++RYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RGFIEG+A KA+P SDEAKLKVKFYVPPF+PIIPV GDYWVLY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWIL R   ++EE Y QLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSL 183

Query: 183 FGK 186
           FGK
Sbjct: 184 FGK 186

[Close]
BLAST of CSPI02G02200 vs. Swiss-Prot
Match: BLC_CITFR (Outer membrane lipoprotein Blc OS=Citrobacter freundii PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 1 

Query: 8   VMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRGFIE 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ + +  R   +
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGY-NPDREMWQ 89

Query: 68  GTAVKA--NPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            T  KA    D   A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  KTEGKAYFTGDPSTAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSKL 155
           L R   + +E+  Q++  A  +G++V+KL
Sbjct: 150 LSRTPTISDEMKQQMLAIATREGFEVNKL 169

[Close]
BLAST of CSPI02G02200 vs. Swiss-Prot
Match: BLC_ECOLI (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1 

Query: 8   VMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRGFIE 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ + +  RG  +
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGY-NPDRGMWQ 89

Query: 68  GTAVKA--NPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            +  KA        A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  QSEGKAYFTGAPTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSK 154
           L R   + +E+  +++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]
BLAST of CSPI02G02200 vs. Swiss-Prot
Match: BLC_ECO57 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1 

Query: 8   VMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRGFIE 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ + +  RG  +
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGY-NPDRGMWQ 89

Query: 68  GTAVKA--NPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            +  KA        A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  QSEGKAYFTGAPTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSK 154
           L R   + +E+  +++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]
BLAST of CSPI02G02200 vs. Swiss-Prot
Match: YR877_MIMIV (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-16
Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K ++     +D++RYMG WYEIA  P+ FQ K   N+ A Y L +   + V N   ++G+
Sbjct: 19  KRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEINGR 78

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVG--DYWVLYLDHDYHHALIGQPSR 122
              + GTA+ A       ++   F  P  + +    G   Y V+++D +Y +A++     
Sbjct: 79  INSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGGN 138

Query: 123 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRR 157
           + LWIL R  ++++  YNQLV     QGYDV+ L R
Sbjct: 139 DTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNLIR 168

[Close]
BLAST of CSPI02G02200 vs. TrEMBL
Match: A0A0A0LL45_CUCSA (Apolipoprotein d OS=Cucumis sativus GN=Csa_2G008710 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.2e-107
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of CSPI02G02200 vs. TrEMBL
Match: B9SBY6_RICCO (Apolipoprotein d, putative OS=Ricinus communis GN=RCOM_0700620 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-88
Identity = 151/183 (82.51%), Postives = 168/183 (91.80%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K +D+KRYMGRWYEIASFPSRFQPKNG NTRATYTL ++ TV+VLNETW DGK
Sbjct: 5   KNEMEVVKGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDGK 64

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RG+IEGTA KANP SDEAKLKVKFYVPPF+PIIPVVGDYWVLYLD DY +ALIGQPSRNY
Sbjct: 65  RGYIEGTAYKANPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYSYALIGQPSRNY 124

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWILCR+ HLD+EIYNQLVEKAKE+GYDVSKL +T  +DPPPEG+EGPKDTKGIWWIKSI
Sbjct: 125 LWILCRRTHLDDEIYNQLVEKAKEEGYDVSKLHKTQQSDPPPEGEEGPKDTKGIWWIKSI 184

Query: 183 FGK 186
            G+
Sbjct: 185 LGR 187

[Close]
BLAST of CSPI02G02200 vs. TrEMBL
Match: A0A067L3I0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03997 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.1e-86
Identity = 146/183 (79.78%), Postives = 167/183 (91.26%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V++ +D+KRYMGRWYEIASFPSRFQPKNG NTRATYTL ++ TV+VLNETW DGK
Sbjct: 6   KKEMEVVRGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDGK 65

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           R  IEGTA KA+P SDEAKLKVKFYVPPF+PIIPVVGDYWVLY+D DY +ALIGQPSRNY
Sbjct: 66  RDSIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYIDEDYTYALIGQPSRNY 125

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LW+LCRQ HLD+EIYNQLVE+AKE+GYDVSKL +T  +DPPPEG+EGPKDTKG+WWIKS+
Sbjct: 126 LWVLCRQTHLDDEIYNQLVERAKEEGYDVSKLHKTPQSDPPPEGEEGPKDTKGVWWIKSL 185

Query: 183 FGK 186
           FGK
Sbjct: 186 FGK 188

[Close]
BLAST of CSPI02G02200 vs. TrEMBL
Match: W9RKZ6_9ROSA (Outer membrane lipoprotein blc OS=Morus notabilis GN=L484_016874 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-84
Identity = 143/185 (77.30%), Postives = 167/185 (90.27%), Query Frame = 1 

Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EM+V+K +D++RYMGRWYEIASFPSRFQPKNG NTRATYTL+++ TVNV+NETW D
Sbjct: 1   MAKIEMEVVKGLDIERYMGRWYEIASFPSRFQPKNGVNTRATYTLKEDGTVNVVNETWTD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRG+I+GTA KA+P SDEAKLKVKFYVPPF+PIIPVVGDYWVLY+D DY  ALIGQP+R
Sbjct: 61  GKRGYIQGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYIDPDYQVALIGQPTR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
            YLWIL R+ H+DE+IYNQLV++A ++GYDVSKL +T  +DPPPEGDEGPKDTKGIWWIK
Sbjct: 121 KYLWILSRKTHIDEDIYNQLVQRAVDEGYDVSKLHKTPQSDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of CSPI02G02200 vs. TrEMBL
Match: Q38JD5_POPBA (Temperature-induced lipocalin OS=Populus balsamifera GN=TIL' PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.4e-84
Identity = 147/183 (80.33%), Postives = 166/183 (90.71%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K VDLKRYMGRWYEIASFPSRFQPKNG NTRATYTL ++ TV+VLNETW DGK
Sbjct: 4   KKEMEVVKGVDLKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGK 63

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RG IEG+A KA+P+SDEAKLKVKFYVPPF+PIIPVVGDYW+LYLD DY +ALIGQPSR+Y
Sbjct: 64  RGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWILYLDDDYQYALIGQPSRSY 123

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWILCR+ H+++EIYNQLVEKAKE+GYDV KL +T  TDPPPE +EGPKDTKGIWWIKSI
Sbjct: 124 LWILCRKTHMEDEIYNQLVEKAKEEGYDVGKLHKTPQTDPPPE-EEGPKDTKGIWWIKSI 183

Query: 183 FGK 186
            GK
Sbjct: 184 LGK 185

[Close]
BLAST of CSPI02G02200 vs. TAIR10
Match: AT5G58070.1 (AT5G58070.1 temperature-induced lipocalin)

HSP 1 Score: 290.4 bits (742), Expect = 7.7e-79
Identity = 129/183 (70.49%), Postives = 156/183 (85.25%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K ++++RYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RGFIEG+A KA+P SDEAKLKVKFYVPPF+PIIPV GDYWVLY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWIL R   ++EE Y QLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSL 183

Query: 183 FGK 186
           FGK
Sbjct: 184 FGK 186

[Close]
BLAST of CSPI02G02200 vs. NCBI nr
Match: gi|449443033|ref|XP_004139285.1| (PREDICTED: apolipoprotein D-like [Cucumis sativus])

HSP 1 Score: 397.1 bits (1019), Expect = 1.7e-107
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of CSPI02G02200 vs. NCBI nr
Match: gi|659070935|ref|XP_008457325.1| (PREDICTED: apolipoprotein D-like [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 2.2e-104
Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 1 

Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EMDVMK VDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRGFIEGTAVK NPDSDEAKLKVKFYVPPF+PIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of CSPI02G02200 vs. NCBI nr
Match: gi|255565025|ref|XP_002523505.1| (PREDICTED: temperature-induced lipocalin-1 [Ricinus communis])

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88
Identity = 151/183 (82.51%), Postives = 168/183 (91.80%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K +D+KRYMGRWYEIASFPSRFQPKNG NTRATYTL ++ TV+VLNETW DGK
Sbjct: 5   KNEMEVVKGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDGK 64

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RG+IEGTA KANP SDEAKLKVKFYVPPF+PIIPVVGDYWVLYLD DY +ALIGQPSRNY
Sbjct: 65  RGYIEGTAYKANPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYSYALIGQPSRNY 124

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWILCR+ HLD+EIYNQLVEKAKE+GYDVSKL +T  +DPPPEG+EGPKDTKGIWWIKSI
Sbjct: 125 LWILCRRTHLDDEIYNQLVEKAKEEGYDVSKLHKTQQSDPPPEGEEGPKDTKGIWWIKSI 184

Query: 183 FGK 186
            G+
Sbjct: 185 LGR 187

[Close]
BLAST of CSPI02G02200 vs. NCBI nr
Match: gi|802592211|ref|XP_012071461.1| (PREDICTED: apolipoprotein D [Jatropha curcas])

HSP 1 Score: 327.4 bits (838), Expect = 1.6e-86
Identity = 146/183 (79.78%), Postives = 167/183 (91.26%), Query Frame = 1 

Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V++ +D+KRYMGRWYEIASFPSRFQPKNG NTRATYTL ++ TV+VLNETW DGK
Sbjct: 6   KKEMEVVRGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDGK 65

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           R  IEGTA KA+P SDEAKLKVKFYVPPF+PIIPVVGDYWVLY+D DY +ALIGQPSRNY
Sbjct: 66  RDSIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYIDEDYTYALIGQPSRNY 125

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LW+LCRQ HLD+EIYNQLVE+AKE+GYDVSKL +T  +DPPPEG+EGPKDTKG+WWIKS+
Sbjct: 126 LWVLCRQTHLDDEIYNQLVERAKEEGYDVSKLHKTPQSDPPPEGEEGPKDTKGVWWIKSL 185

Query: 183 FGK 186
           FGK
Sbjct: 186 FGK 188

[Close]
BLAST of CSPI02G02200 vs. NCBI nr
Match: gi|720063749|ref|XP_010275737.1| (PREDICTED: apolipoprotein D [Nelumbo nucifera])

HSP 1 Score: 324.7 bits (831), Expect = 1.0e-85
Identity = 149/185 (80.54%), Postives = 167/185 (90.27%), Query Frame = 1 

Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EMDV+K +DL+RYMGRWYEIASFPSRFQPK+G NTRATYTL  + TV+VLNETW  
Sbjct: 1   MAKKEMDVVKGLDLQRYMGRWYEIASFPSRFQPKDGINTRATYTLNSDVTVHVLNETWSG 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRG+IEGTA KA+P SDEAKLKVKFYVPPF+PIIPVVGDYWVLY+D DY +ALIGQPSR
Sbjct: 61  GKRGYIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYIDDDYRYALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDE+IYNQL++KAK++GYDVSK+ RTTHT+PPPE  E P DTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEDIYNQLLQKAKDEGYDVSKIHRTTHTNPPPEA-ESPNDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 184

The following BLAST results are available for this feature:
BLAST of CSPI02G02200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIL_ARATH1.4e-7770.49Temperature-induced lipocalin-1 OS=Arabidopsis thaliana GN=TIL PE=1 SV=1[more]
BLC_CITFR1.3e-1938.93Outer membrane lipoprotein Blc OS=Citrobacter freundii PE=3 SV=1[more]
BLC_ECOLI2.9e-1938.51Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1[more]
BLC_ECO572.9e-1938.51Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1[more]
YR877_MIMIV6.7e-1632.69Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV... [more]
BLAST of CSPI02G02200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL45_CUCSA1.2e-107100.00Apolipoprotein d OS=Cucumis sativus GN=Csa_2G008710 PE=3 SV=1[more]
B9SBY6_RICCO1.2e-8882.51Apolipoprotein d, putative OS=Ricinus communis GN=RCOM_0700620 PE=3 SV=1[more]
A0A067L3I0_JATCU1.1e-8679.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03997 PE=3 SV=1[more]
W9RKZ6_9ROSA1.1e-8477.30Outer membrane lipoprotein blc OS=Morus notabilis GN=L484_016874 PE=3 SV=1[more]
Q38JD5_POPBA1.4e-8480.33Temperature-induced lipocalin OS=Populus balsamifera GN=TIL' PE=2 SV=1[more]
BLAST of CSPI02G02200 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58070.17.7e-7970.49 temperature-induced lipocalin[more]
BLAST of CSPI02G02200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443033|ref|XP_004139285.1|1.7e-107100.00PREDICTED: apolipoprotein D-like [Cucumis sativus][more]
gi|659070935|ref|XP_008457325.1|2.2e-10496.76PREDICTED: apolipoprotein D-like [Cucumis melo][more]
gi|255565025|ref|XP_002523505.1|1.7e-8882.51PREDICTED: temperature-induced lipocalin-1 [Ricinus communis][more]
gi|802592211|ref|XP_012071461.1|1.6e-8679.78PREDICTED: apolipoprotein D [Jatropha curcas][more]
gi|720063749|ref|XP_010275737.1|1.0e-8580.54PREDICTED: apolipoprotein D [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000566Lipocln_cytosolic_FA-bd_dom
IPR002446Lipocalin_bac
IPR011038Calycin-like
IPR012674Calycin
IPR022271Lipocalin_ApoD
IPR022272Lipocalin_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0009416 response to light stimulus
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0008150 biological_process
biological_process GO:0009408 response to heat
biological_process GO:0009735 response to cytokinin
biological_process GO:0042538 hyperosmotic salinity response
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G02200.1CSPI02G02200.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000566Lipocalin/cytosolic fatty-acid binding domainPFAMPF08212Lipocalin_2coord: 12..158
score: 6.6
IPR002446Lipocalin, bacterialPRINTSPR01171BCTLIPOCALINcoord: 148..158
score: 2.0E-8coord: 121..132
score: 2.0E-8coord: 106..114
score: 2.0E-8coord: 12..26
score: 2.
IPR011038Calycin-likeunknownSSF50814Lipocalinscoord: 5..163
score: 6.23
IPR012674CalycinGENE3DG3DSA:2.40.128.20coord: 5..161
score: 2.7
IPR022271Lipocalin, ApoD typePIRPIRSF036893Lipocalin_ApoDcoord: 1..170
score: 3.0
IPR022272Lipocalin family conserved sitePROSITEPS00213LIPOCALINcoord: 11..24
scor
NoneNo IPR availablePANTHERPTHR10612APOLIPOPROTEIN Dcoord: 1..183
score: 1.9
NoneNo IPR availablePANTHERPTHR10612:SF19SUBFAMILY NOT NAMEDcoord: 1..183
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G02200Cla018714Watermelon (97103) v1cpiwmB179
CSPI02G02200Cla016662Watermelon (97103) v1cpiwmB165
CSPI02G02200Csa2G008710Cucumber (Chinese Long) v2cpicuB065
CSPI02G02200Csa1G268280Cucumber (Chinese Long) v2cpicuB062
CSPI02G02200MELO3C004486Melon (DHL92) v3.5.1cpimeB135
CSPI02G02200MELO3C010244Melon (DHL92) v3.5.1cpimeB109
CSPI02G02200ClCG06G012210Watermelon (Charleston Gray)cpiwcgB159
CSPI02G02200ClCG11G003530Watermelon (Charleston Gray)cpiwcgB102
CSPI02G02200Lsi06G010380Bottle gourd (USVL1VR-Ls)cpilsiB132
CSPI02G02200MELO3C010244.2Melon (DHL92) v3.6.1cpimedB104
CSPI02G02200MELO3C004486.2Melon (DHL92) v3.6.1cpimedB128
CSPI02G02200CsaV3_2G003400Cucumber (Chinese Long) v3cpicucB080
CSPI02G02200CsaV3_1G028710Cucumber (Chinese Long) v3cpicucB076
CSPI02G02200Cla97C06G121400Watermelon (97103) v2cpiwmbB153
CSPI02G02200Cla97C11G210050Watermelon (97103) v2cpiwmbB105
CSPI02G02200Bhi02G000710Wax gourdcpiwgoB213
CSPI02G02200Bhi06G001589Wax gourdcpiwgoB137
CSPI02G02200Cucsa.132560Cucumber (Gy14) v1cgycpiB187
CSPI02G02200Cucsa.350880Cucumber (Gy14) v1cgycpiB519
CSPI02G02200CmaCh11G004780Cucurbita maxima (Rimu)cmacpiB113
CSPI02G02200CmaCh05G012540Cucurbita maxima (Rimu)cmacpiB800
CSPI02G02200CmaCh10G004820Cucurbita maxima (Rimu)cmacpiB072
CSPI02G02200CmaCh12G011750Cucurbita maxima (Rimu)cmacpiB174
CSPI02G02200CmoCh05G012860Cucurbita moschata (Rifu)cmocpiB787
CSPI02G02200CmoCh10G005150Cucurbita moschata (Rifu)cmocpiB064
CSPI02G02200CmoCh11G004750Cucurbita moschata (Rifu)cmocpiB106
CSPI02G02200Cp4.1LG11g10260Cucurbita pepo (Zucchini)cpecpiB100
CSPI02G02200Cp4.1LG04g08960Cucurbita pepo (Zucchini)cpecpiB670
CSPI02G02200Cp4.1LG07g11060Cucurbita pepo (Zucchini)cpecpiB813
CSPI02G02200CsGy2G002300Cucumber (Gy14) v2cgybcpiB056
CSPI02G02200CsGy1G017650Cucumber (Gy14) v2cgybcpiB018
CSPI02G02200Carg10938Silver-seed gourdcarcpiB0603
CSPI02G02200Carg17470Silver-seed gourdcarcpiB0286
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI02G02200CSPI01G17460Wild cucumber (PI 183967)cpicpiB011
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G02200Watermelon (Charleston Gray)cpiwcgB146
CSPI02G02200Watermelon (97103) v1cpiwmB131
CSPI02G02200Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G02200Melon (DHL92) v3.6.1cpimedB132
CSPI02G02200Cucumber (Gy14) v2cgybcpiB106
CSPI02G02200Cucurbita moschata (Rifu)cmocpiB159