Carg10938 (gene) Silver-seed gourd

Overview
NameCarg10938
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionOuter membrane lipoprotein blc
LocationCucurbita_argyrosperma_scaffold_034 : 1045697 .. 1047445 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTACCTTGTTTGGCAAGCAAGAAAAAAGAAGAAATGAAAAAGAATTTTGACCCCACAAGTAGGCGTCTGTCGATTTCTCGACCACAAAAAAACTCCCCTTTCCCACCGCTAAATATCTCTCCACGTCGCCTCTTTTCCCAAGTCCACATCTTCTTCAACACCCAATTATTCAAATCAAATCAACCACCGAACCCCGCAAATAAAGCCCTTCTAAGGTATCTTTCAGAAACTCAACATTCAACAATGGCGAAGAAAGAGATGGAAGTCATGAAGGACGTCGACCTTGAGAGGTACATGGGTCGGTGGTACGAAATAGCCTCATTTCCATCGAGGTTCCAGCCCAAAAATGGGGCTAATACCAGAGCGACCTACACCCTGAGAGACGAGCGGACGGTGAATGTCCTAAATGAAACATGGGTTGATGGCAGGAGAAGTTTCATTGAGGGTACTGCTGTTAAAGCTAACCCTGATAGCAATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCTTGCCCATCATTCCTATTGTTGGAGATTACTGGATTTTGTATCTTGATCATGATTATCACCATGCTTTAATTGGCCAGCCTAGCAGAAACTATCTCTGGGTATGACTGATTTTCTCTCTACAATACATATTATTTTGTGCTAGCCAGCTAAATACTACAAGTATCAAGTGTATTGTTAGTTGAGCTATATTTAGGTGACCCTTAAAGACTACAAGTATCAAGTGTATTGCTAGTTGAGCTATATTTAGGTGACCGCTAAATACTACAAGTTTCAAGTGTATTGCTAGTTGAGCTATATTTAGATGACCGCTAAATACTACAGGTTTCAAGTTGAGCTGTATGCAGGTTGACCGCTAAATACTACAAGTTTCAAGTGTATTGCTAGTTGAGCTATATCTAGGTGACTGCTAAATACTATCGGTTTGAAGTTGAGGTGTATTTAGGTTGACTGCTAAATACTACGGGTTTCAAGTGTATGGCTAGTTGAGCTATATTTAGGTTGACCGGGAAATACTACGGGTTTCATTTCGAAACTCGGATAGCCAAACTGTTGGTTTTGGTGAAAAAGGATAATGGGATGTTTCTGAATTGTTCTTTGATGGTGTTTTCTTGACAGATATTGTGCAGGGAGAATCATTTGGATGAGGAGACATATAATGAACTGGTGGAGAAAGCTAAGGAACAAGGTTATGATGTGAGCAAGCTTCGTAGGACAACACACACTGACCCTCCAGAAGGAGATGAAGGTCCTAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGATCAAACTTTGAAGGAAAGTAAGTTGAATATTGTACCTTTGAGTTCAATGGGTTTGTTAAAGTTCACCACTTTGGTTTGTATCCAGTGAAGATTTTGTTTTTGTCGAATGGTTGAAACGAGTCAGTCCTTTGTGCTTTGTGTATAGAGTCTCCCAGATATTGTATTTGCTGAATAGTTTTTTACGAAGCTGGGATTGTGAGCTCAACATTTTACTGTTGGACTGCCAGGTTCTGAACTTTCCCAGTCCTGTGAAGATGAAATTTGAATAGATATGCAATTTACTTATGTATATTCTGCAAACTTTTCTATTCCATTCAACATCAATCAGATCAATATCAATAGGTTGATTGTTTCGTTCTGTATCTTCCAAAAGGAAAAAAAGATTTCTGAGAACTGTTTCCTCGATCCAAAAGAGAGTACTTGGGTTCTCCC

mRNA sequence

CATTACCTTGTTTGGCAAGCAAGAAAAAAGAAGAAATGAAAAAGAATTTTGACCCCACAAGTAGGCGTCTGTCGATTTCTCGACCACAAAAAAACTCCCCTTTCCCACCGCTAAATATCTCTCCACGTCGCCTCTTTTCCCAAGTCCACATCTTCTTCAACACCCAATTATTCAAATCAAATCAACCACCGAACCCCGCAAATAAAGCCCTTCTAAGGTATCTTTCAGAAACTCAACATTCAACAATGGCGAAGAAAGAGATGGAAGTCATGAAGGACGTCGACCTTGAGAGGTACATGGGTCGGTGGTACGAAATAGCCTCATTTCCATCGAGGTTCCAGCCCAAAAATGGGGCTAATACCAGAGCGACCTACACCCTGAGAGACGAGCGGACGGTGAATGTCCTAAATGAAACATGGGTTGATGGCAGGAGAAGTTTCATTGAGGGTACTGCTGTTAAAGCTAACCCTGATAGCAATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCTTGCCCATCATTCCTATTGTTGGAGATTACTGGATTTTGTATCTTGATCATGATTATCACCATGCTTTAATTGGCCAGCCTAGCAGAAACTATCTCTGGATATTGTGCAGGGAGAATCATTTGGATGAGGAGACATATAATGAACTGGTGGAGAAAGCTAAGGAACAAGGTTATGATGTGAGCAAGCTTCGTAGGACAACACACACTGACCCTCCAGAAGGAGATGAAGGTCCTAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGATCAAACTTTGAAGGAAAGTAAGTTGAATATTGTACCTTTGAGTTCAATGGGTTTGTTAAAGTTCACCACTTTGGTTTGTATCCAGTGAAGATTTTGTTTTTGTCGAATGGTTGAAACGAGTCAGTCCTTTGTGCTTTGTGTATAGAGTCTCCCAGATATTGTATTTGCTGAATAGTTTTTTACGAAGCTGGGATTGTGAGCTCAACATTTTACTGTTGGACTGCCAGGTTCTGAACTTTCCCAGTCCTGTGAAGATGAAATTTGAATAGATATGCAATTTACTTATGTATATTCTGCAAACTTTTCTATTCCATTCAACATCAATCAGATCAATATCAATAGGTTGATTGTTTCGTTCTGTATCTTCCAAAAGGAAAAAAAGATTTCTGAGAACTGTTTCCTCGATCCAAAAGAGAGTACTTGGGTTCTCCC

Coding sequence (CDS)

ATGAAAAAGAATTTTGACCCCACAAGTAGGCGTCTGTCGATTTCTCGACCACAAAAAAACTCCCCTTTCCCACCGCTAAATATCTCTCCACGTCGCCTCTTTTCCCAAGTCCACATCTTCTTCAACACCCAATTATTCAAATCAAATCAACCACCGAACCCCGCAAATAAAGCCCTTCTAAGGTATCTTTCAGAAACTCAACATTCAACAATGGCGAAGAAAGAGATGGAAGTCATGAAGGACGTCGACCTTGAGAGGTACATGGGTCGGTGGTACGAAATAGCCTCATTTCCATCGAGGTTCCAGCCCAAAAATGGGGCTAATACCAGAGCGACCTACACCCTGAGAGACGAGCGGACGGTGAATGTCCTAAATGAAACATGGGTTGATGGCAGGAGAAGTTTCATTGAGGGTACTGCTGTTAAAGCTAACCCTGATAGCAATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCTTGCCCATCATTCCTATTGTTGGAGATTACTGGATTTTGTATCTTGATCATGATTATCACCATGCTTTAATTGGCCAGCCTAGCAGAAACTATCTCTGGATATTGTGCAGGGAGAATCATTTGGATGAGGAGACATATAATGAACTGGTGGAGAAAGCTAAGGAACAAGGTTATGATGTGAGCAAGCTTCGTAGGACAACACACACTGACCCTCCAGAAGGAGATGAAGGTCCTAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGA

Protein sequence

MKKNFDPTSRRLSISRPQKNSPFPPLNISPRRLFSQVHIFFNTQLFKSNQPPNPANKALLRYLSETQHSTMAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKSIFGK
Homology
[Close]
BLAST of Carg10938 vs. NCBI nr
Match: XP_022946158.1 (temperature-induced lipocalin-1-like [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLD DYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDRDYHHALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 250
           NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS
Sbjct: 121 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 180

Query: 251 IFGK 255
           IFGK
Sbjct: 181 IFGK 184

[Close]
BLAST of Carg10938 vs. NCBI nr
Match: XP_022999303.1 (temperature-induced lipocalin-1-like [Cucurbita maxima])

HSP 1 Score: 386.0 bits (990), Expect = 1.0e-103
Identity = 181/184 (98.37%), Postives = 182/184 (98.91%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           GRRSFIEGTA KANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAFKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 250
           NYLWILCRENHLDEE YNELV+KAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS
Sbjct: 121 NYLWILCRENHLDEEIYNELVKKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 180

Query: 251 IFGK 255
           IFGK
Sbjct: 181 IFGK 184

[Close]
BLAST of Carg10938 vs. NCBI nr
Match: XP_023545355.1 (temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           MA KEMEVMKDVDLERYMGRWYEIASFPSRFQPKNG NTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 250
           NYLWILCRENHLDEE YNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS
Sbjct: 121 NYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTDPPEGDEGPKDTKGIWWIKS 180

Query: 251 IFGK 255
           +FGK
Sbjct: 181 MFGK 184

[Close]
BLAST of Carg10938 vs. NCBI nr
Match: XP_004139285.1 (PREDICTED: apolipoprotein D-like [Cucumis sativus] >KGN60731.1 Apolipoprotein d [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 7.5e-99
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           M K EM+VMKDVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           G+R FIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 250
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 251 SIFGK 255
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Carg10938 vs. NCBI nr
Match: XP_008457325.1 (PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >XP_008457334.1 PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           MAKKEM+VMK VDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           G+R FIEGTAVK NPDS+EAKLKVKFYVPPFLPIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 250
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 251 SIFGK 255
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Carg10938 vs. TAIR10
Match: AT5G58070.1 (temperature-induced lipocalin)

HSP 1 Score: 285.0 bits (728), Expect = 4.4e-77
Identity = 128/183 (69.95%), Postives = 157/183 (85.79%), Query Frame = 0 

Query: 73  KKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGR 132
           KKEMEV+K +++ERYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +G+
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 133 RSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNY 192
           R FIEG+A KA+P S+EAKLKVKFYVPPFLPIIP+ GDYW+LY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 193 LWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKSI 252
           LWIL R   ++EETY +LVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNXAPEDSKGVWWFKSL 183

Query: 253 FGK 255
           FGK
Sbjct: 184 FGK 186

[Close]
BLAST of Carg10938 vs. Swiss-Prot
Match: sp|Q9FGT8|TIL_ARATH (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 8.0e-76
Identity = 128/183 (69.95%), Postives = 157/183 (85.79%), Query Frame = 0 

Query: 73  KKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGR 132
           KKEMEV+K +++ERYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +G+
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 133 RSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNY 192
           R FIEG+A KA+P S+EAKLKVKFYVPPFLPIIP+ GDYW+LY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 193 LWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKSI 252
           LWIL R   ++EETY +LVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNXAPEDSKGVWWFKSL 183

Query: 253 FGK 255
           FGK
Sbjct: 184 FGK 186

[Close]
BLAST of Carg10938 vs. Swiss-Prot
Match: sp|Q46036|BLC_CITFR (Outer membrane lipoprotein Blc OS=Citrobacter freundii OX=546 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.9e-19
Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 0 

Query: 74  KEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGRR 133
           K + V+ + D +RY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +   R 
Sbjct: 26  KGVTVVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGYNPDRE 85

Query: 134 SF--IEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRN 193
            +   EG A     D + A LKV F+        P  G Y ++ LD +Y HAL+  P R+
Sbjct: 86  MWQKTEGKAYFTG-DPSTAALKVSFFG-------PFYGGYNVIALDREYRHALVCGPDRD 145

Query: 194 YLWILCRENHLDEETYNELVEKAKEQGYDVSKL 225
           YLWIL R   + +E   +++  A  +G++V+KL
Sbjct: 146 YLWILSRTPTISDEMKQQMLAIATREGFEVNKL 169

[Close]
BLAST of Carg10938 vs. Swiss-Prot
Match: sp|P0A902|BLC_ECO57 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-18
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 0 

Query: 78  VMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGRRSF-- 137
           V+ + D +RY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +   R  +  
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 138 IEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYLWI 197
            EG A      +  A LKV F+        P  G Y ++ LD +Y HAL+  P R+YLWI
Sbjct: 90  SEGKAYFTGAPT-RAALKVSFFG-------PFYGGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 198 LCRENHLDEETYNELVEKAKEQGYDVSK 224
           L R   + +E   E++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]
BLAST of Carg10938 vs. Swiss-Prot
Match: sp|P0A901|BLC_ECOLI (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-18
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 0 

Query: 78  VMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGRRSF-- 137
           V+ + D +RY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +   R  +  
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 138 IEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRNYLWI 197
            EG A      +  A LKV F+        P  G Y ++ LD +Y HAL+  P R+YLWI
Sbjct: 90  SEGKAYFTGAPT-RAALKVSFFG-------PFYGGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 198 LCRENHLDEETYNELVEKAKEQGYDVSK 224
           L R   + +E   E++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]
BLAST of Carg10938 vs. Swiss-Prot
Match: sp|Q5URA7|YR877_MIMIV (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R877 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.9e-17
Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = 0 

Query: 72  AKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDG 131
           +K+++     +D++RYMG WYEIA  P+ FQ K   N+ A Y L +   + V N   ++G
Sbjct: 18  SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEING 77

Query: 132 RRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVG--DYWILYLDHDYHHALIGQPS 191
           R + + GTA+ A       ++   F  P  L +    G   Y ++++D +Y +A++    
Sbjct: 78  RINSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGG 137

Query: 192 RNYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRR 227
            + LWIL R  ++++ TYN+LV     QGYDV+ L R
Sbjct: 138 NDTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNLIR 168

[Close]
BLAST of Carg10938 vs. TrEMBL
Match: tr|A0A0A0LL45|A0A0A0LL45_CUCSA (Apolipoprotein d OS=Cucumis sativus OX=3659 GN=Csa_2G008710 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 5.0e-99
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           M K EM+VMKDVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           G+R FIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 250
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 251 SIFGK 255
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Carg10938 vs. TrEMBL
Match: tr|A0A1S3C5X6|A0A1S3C5X6_CUCME (temperature-induced lipocalin-1-like OS=Cucumis melo OX=3656 GN=LOC103497043 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 8.5e-99
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           MAKKEM+VMK VDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           G+R FIEGTAVK NPDS+EAKLKVKFYVPPFLPIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 250
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 251 SIFGK 255
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Carg10938 vs. TrEMBL
Match: tr|A0A2N9FQS8|A0A2N9FQS8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20959 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 9.1e-85
Identity = 147/185 (79.46%), Postives = 169/185 (91.35%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           MA KEMEV+K V+LERYMGRWYEIASFPSRFQPKNG NTRATYTLR++ TVNVLNETW D
Sbjct: 1   MANKEMEVVKGVNLERYMGRWYEIASFPSRFQPKNGMNTRATYTLREDGTVNVLNETWND 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
           G+R +IEG+A KA+P+S+EAKLKVKFYVPPFLPIIP+VGDYW+LYLD DYHHALIGQP+R
Sbjct: 61  GKRGYIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYHHALIGQPTR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 250
            YLWILCRE HLD+E YN+LV++A++QGYDVSKL++T  +D PPEGDEGPKDTKGIWW K
Sbjct: 121 KYLWILCREPHLDDEIYNQLVQRARDQGYDVSKLQKTPQSDSPPEGDEGPKDTKGIWWFK 180

Query: 251 SIFGK 255
           SI GK
Sbjct: 181 SILGK 185

[Close]
BLAST of Carg10938 vs. TrEMBL
Match: tr|A0A2R6R4V6|A0A2R6R4V6_ACTCH (Temperature-induced lipocalin-1 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10065 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 5.9e-84
Identity = 145/185 (78.38%), Postives = 168/185 (90.81%), Query Frame = 0 

Query: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130
           MAKKEMEV+K +DLERYMGRWYEIASFPSRFQPK+G NTRATYTLR++  VNVLNETW D
Sbjct: 1   MAKKEMEVVKGLDLERYMGRWYEIASFPSRFQPKSGINTRATYTLREDGIVNVLNETWTD 60

Query: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190
            +R FIEGTA KA+P S+EAKLKVKFYVPPFLPIIP+VGDYW+L++D DY +ALIGQPSR
Sbjct: 61  DKRGFIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLFIDDDYQYALIGQPSR 120

Query: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 250
            YLWILCR+NH+ EETY +LV++AK++GYDVSKL +TTHTD PPEG++GPKDTKGIWW K
Sbjct: 121 KYLWILCRQNHIAEETYKQLVQRAKDEGYDVSKLHQTTHTDPPPEGEDGPKDTKGIWWFK 180

Query: 251 SIFGK 255
           SIFGK
Sbjct: 181 SIFGK 185

[Close]
BLAST of Carg10938 vs. TrEMBL
Match: tr|B9SBY6|B9SBY6_RICCO (Apolipoprotein d, putative OS=Ricinus communis OX=3988 GN=RCOM_0700620 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.8e-83
Identity = 145/184 (78.80%), Postives = 165/184 (89.67%), Query Frame = 0 

Query: 72  AKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDG 131
           AK EMEV+K +D++RYMGRWYEIASFPSRFQPKNG NTRATYTL ++ TV+VLNETW DG
Sbjct: 4   AKNEMEVVKGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDG 63

Query: 132 RRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSRN 191
           +R +IEGTA KANP S+EAKLKVKFYVPPFLPIIP+VGDYW+LYLD DY +ALIGQPSRN
Sbjct: 64  KRGYIEGTAYKANPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYSYALIGQPSRN 123

Query: 192 YLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIKS 251
           YLWILCR  HLD+E YN+LVEKAKE+GYDVSKL +T  +D PPEG+EGPKDTKGIWWIKS
Sbjct: 124 YLWILCRRTHLDDEIYNQLVEKAKEEGYDVSKLHKTQQSDPPPEGEEGPKDTKGIWWIKS 183

Query: 252 IFGK 255
           I G+
Sbjct: 184 ILGR 187

The following BLAST results are available for this feature:
BLAST of Carg10938 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946158.11.6e-10499.46temperature-induced lipocalin-1-like [Cucurbita moschata][more]
XP_022999303.11.0e-10398.37temperature-induced lipocalin-1-like [Cucurbita maxima][more]
XP_023545355.12.3e-10397.83temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo][more]
XP_004139285.17.5e-9992.43PREDICTED: apolipoprotein D-like [Cucumis sativus] >KGN60731.1 Apolipoprotein d ... [more]
XP_008457325.11.3e-9892.43PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >XP_008457334.1 P... [more]
BLAST of Carg10938 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58070.14.4e-7769.95temperature-induced lipocalin[more]
BLAST of Carg10938 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FGT8|TIL_ARATH8.0e-7669.95Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1[more]
sp|Q46036|BLC_CITFR6.9e-1936.60Outer membrane lipoprotein Blc OS=Citrobacter freundii OX=546 PE=3 SV=1[more]
sp|P0A902|BLC_ECO572.6e-1837.84Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 ... [more]
sp|P0A901|BLC_ECOLI2.6e-1837.84Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc ... [more]
sp|Q5URA7|YR877_MIMIV4.9e-1733.12Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R8... [more]
BLAST of Carg10938 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LL45|A0A0A0LL45_CUCSA5.0e-9992.43Apolipoprotein d OS=Cucumis sativus OX=3659 GN=Csa_2G008710 PE=3 SV=1[more]
tr|A0A1S3C5X6|A0A1S3C5X6_CUCME8.5e-9992.43temperature-induced lipocalin-1-like OS=Cucumis melo OX=3656 GN=LOC103497043 PE=... [more]
tr|A0A2N9FQS8|A0A2N9FQS8_FAGSY9.1e-8579.46Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20959 PE=3 SV=1[more]
tr|A0A2R6R4V6|A0A2R6R4V6_ACTCH5.9e-8478.38Temperature-induced lipocalin-1 like OS=Actinidia chinensis var. chinensis OX=15... [more]
tr|B9SBY6|B9SBY6_RICCO3.8e-8378.80Apolipoprotein d, putative OS=Ricinus communis OX=3988 GN=RCOM_0700620 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR022272Lipocalin_CS
IPR012674Calycin
IPR000566Lipocln_cytosolic_FA-bd_dom
IPR002446Lipocalin_bac
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005215 transporter activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10938-RACarg10938-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002446Lipocalin, bacterialPRINTSPR01171BCTLIPOCALINcoord: 82..96
score: 56.3
coord: 176..184
score: 54.09
coord: 218..228
score: 38.66
coord: 191..202
score: 48.99
IPR000566Lipocalin/cytosolic fatty-acid binding domainPFAMPF08212Lipocalin_2coord: 82..228
e-value: 3.8E-52
score: 176.0
IPR012674CalycinGENE3DG3DSA:2.40.128.20coord: 68..233
e-value: 9.6E-50
score: 170.6
IPR012674CalycinSUPERFAMILYSSF50814Lipocalinscoord: 74..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..242
NoneNo IPR availablePANTHERPTHR10612:SF32SUBFAMILY NOT NAMEDcoord: 71..254
NoneNo IPR availablePANTHERPTHR10612APOLIPOPROTEIN Dcoord: 71..254
IPR022272Lipocalin family conserved sitePROSITEPS00213LIPOCALINcoord: 81..94