Cp4.1LG11g03480 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g03480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionYGGT family protein
LocationCp4.1LG11 : 1926931 .. 1928962 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCCCAACTTGTGAGAGATAGAGAGAGAAGGAGAGAGCTCTGGTGTTCGCTTCTGCATCTCTCTTCAATCCCTTTATCCTCTTCTTCCTCGGCTAGCTCTCTCAGAGACGAGCAAAGCAAGATGACTCCAGACGAGTCGTCGGTTCTAAACCCTAGACGAAGTTCCACGGCTTTTAGCTTCGTTCCAAATTGCATATCGTCGTTCTCACCGGCATTTTCTCAAACACCTTTTGGAGCGTCCAGGAGAAGGCACGTCGATTTTGTTCCACCATGTAAATTTCTTCGCGATCTCCATGAATCTTTCGCGTCAACTGCTGAAAAGTGCATCGTATTTTTTCACTCTTTGGCTTCTGAGAATCCGTTTCTGAACAAATTGATGTCGTTGTCTTCTGAGTTACAGAGTTTTCATCACCAGGTAAATAACTGCAAATTTCATGCTACCAACTGTATTTTGACGGTCTCGCGAAATTTGGATTCGTGTTTGTAATGCTACCTTCTCTTGCACTTCCATCCGTTTGTACAGTTTGATTTTCAGCTAGAATATGACCTGCTGCTTACGGTTAATTTTTTCCCGGGGGTTTCGATTTTTCTAATTTCTGCGGTACTTCTGTTGAATTCTATTTCAGATCCATGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAACTTTGCGGCAGTTTTGCCTGGGGATTCGGTGGCAGGACTTTTGGTCACGAATGGTATTCAGAATTTCTTGAGCATCTACAACACACTGTTGGTCGTCAGGCTAGTTTTGACTTGGTTTCCGAACACACCTCCCGCCATTGTTAGTCCACTAAGGTAACTCTTCCTTGTTTTTGACATTCCTATTAAAAAAAGAAGAAAGAAGAAAGACGCTTTCACAATGATTGACTGTGAGCCTGGAATGAAATTTCTGAACTGAACATAGAAGTTGAAAGTTGAAAGTGGAAACTGTATGTTGTTTAAATTGTTAGTTCTACTGATCCAACTCATATTCAAATTCACATATACAAAACTACTGATTCAGCACATATATAAAACTACTGATTCAGCACATATACAAAACTACTGATTCAGCACATATACAAAACTACTGATTCAGTCATATGTCATCTTATGCTTAAGAAACATATCTTAAAAACTCTCCTGTCAATCAAATATTATGGATAAAAAAGCTGAAGAAAAATTCTTTCTTATATATTAGAAGAACAATAATTAGTTGTTAAGAACTTTAGAACCACTTTTTCTAAGGTTTGGAAAGCATCTTTTGTCGAAATTTTAAGTATTTAGTGCTGGTTTAGAACGAATTTTTAAGTGAACAGTTAGAAAGTCATTTCAAATAACCTCAACCTCATTGATCCGACACTGACAACAATCTTTGTGTTCATGGGTATTGCTCCACGACTGCCCCTTTTTAGTTTGTGTTCATAAAAACAGTTGTAATGTAAAATTTGGTGCTAATTGTCAAGGTTTGATTCTCTTTCAGCACGCTATGTGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGGGGGACACTTGATTTGTCTCCAATATTGGCATTCCTGGTCTTAAACGCCTTTACCAGCACCGCCGCTGCTCTTCCTGCCGAACTTCCAGTCCCAAATTCGTCTCCTGCAAATGCTACTCCTTCAAAAGGCTCATTTGATCTTACAACATCCCAAAAGAAATGGATCAGAAGGCTTCAGGGAAGTGTGGAAAATAAGGCTGATAGCGCTCGATAGCCCTCGAATTCAGGTTTGTATCAGTTGATTCAGCTCAATTCATTTGAAACTGTGACACTTTCATCCTTATAAAACTCTCTATTGTAAAGTGCGGTTGATGGGATTACTATTTTGTGCCACTTCTCTTGATTTTGTACTGTAAATCTTTTAGTTGAGTCATTTGGTGAGTTCACTTCTTCCATCTCCAATGTTCAAGGCATGTGATGTGCAGATAAGAAATATATATATTTTTAAAATTGCATGTAAATTTTATATTTTGTATAATTTTCAG

mRNA sequence

GGCCCAACTTGTGAGAGATAGAGAGAGAAGGAGAGAGCTCTGGTGTTCGCTTCTGCATCTCTCTTCAATCCCTTTATCCTCTTCTTCCTCGGCTAGCTCTCTCAGAGACGAGCAAAGCAAGATGACTCCAGACGAGTCGTCGGTTCTAAACCCTAGACGAAGTTCCACGGCTTTTAGCTTCGTTCCAAATTGCATATCGTCGTTCTCACCGGCATTTTCTCAAACACCTTTTGGAGCGTCCAGGAGAAGGCACGTCGATTTTGTTCCACCATGTAAATTTCTTCGCGATCTCCATGAATCTTTCGCGTCAACTGCTGAAAAGTGCATCGTATTTTTTCACTCTTTGGCTTCTGAGAATCCGTTTCTGAACAAATTGATGTCGTTGTCTTCTGAGTTACAGAGTTTTCATCACCAGATCCATGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAACTTTGCGGCAGTTTTGCCTGGGGATTCGGTGGCAGGACTTTTGGTCACGAATGGTATTCAGAATTTCTTGAGCATCTACAACACACTGTTGGTCGTCAGGCTAGTTTTGACTTGGTTTCCGAACACACCTCCCGCCATTGTTAGTCCACTAAGCACGCTATGTGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGGGGGACACTTGATTTGTCTCCAATATTGGCATTCCTGGTCTTAAACGCCTTTACCAGCACCGCCGCTGCTCTTCCTGCCGAACTTCCAGTCCCAAATTCGTCTCCTGCAAATGCTACTCCTTCAAAAGGCTCATTTGATCTTACAACATCCCAAAAGAAATGGATCAGAAGGCTTCAGGGAAGTGTGGAAAATAAGGCTGATAGCGCTCGATAGCCCTCGAATTCAGGTTTGTATCAGTTGATTCAGCTCAATTCATTTGAAACTGTGACACTTTCATCCTTATAAAACTCTCTATTGTAAAGTGCGGTTGATGGGATTACTATTTTGTGCCACTTCTCTTGATTTTGTACTGTAAATCTTTTAGTTGAGTCATTTGGTGAGTTCACTTCTTCCATCTCCAATGTTCAAGGCATGTGATGTGCAGATAAGAAATATATATATTTTTAAAATTGCATGTAAATTTTATATTTTGTATAATTTTCAG

Coding sequence (CDS)

ATGACTCCAGACGAGTCGTCGGTTCTAAACCCTAGACGAAGTTCCACGGCTTTTAGCTTCGTTCCAAATTGCATATCGTCGTTCTCACCGGCATTTTCTCAAACACCTTTTGGAGCGTCCAGGAGAAGGCACGTCGATTTTGTTCCACCATGTAAATTTCTTCGCGATCTCCATGAATCTTTCGCGTCAACTGCTGAAAAGTGCATCGTATTTTTTCACTCTTTGGCTTCTGAGAATCCGTTTCTGAACAAATTGATGTCGTTGTCTTCTGAGTTACAGAGTTTTCATCACCAGATCCATGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAACTTTGCGGCAGTTTTGCCTGGGGATTCGGTGGCAGGACTTTTGGTCACGAATGGTATTCAGAATTTCTTGAGCATCTACAACACACTGTTGGTCGTCAGGCTAGTTTTGACTTGGTTTCCGAACACACCTCCCGCCATTGTTAGTCCACTAAGCACGCTATGTGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGGGGGACACTTGATTTGTCTCCAATATTGGCATTCCTGGTCTTAAACGCCTTTACCAGCACCGCCGCTGCTCTTCCTGCCGAACTTCCAGTCCCAAATTCGTCTCCTGCAAATGCTACTCCTTCAAAAGGCTCATTTGATCTTACAACATCCCAAAAGAAATGGATCAGAAGGCTTCAGGGAAGTGTGGAAAATAAGGCTGATAGCGCTCGATAG

Protein sequence

MTPDESSVLNPRRSSTAFSFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHESFASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLPGDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRRLQGSVENKADSAR
Homology
[Close]
BLAST of Cp4.1LG11g03480 vs. Swiss-Prot
Match: YLMG2_ARATH (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana GN=YLMG2 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.4e-58
Identity = 127/225 (56.44%), Postives = 155/225 (68.89%), Query Frame = 1 

Query: 21  VPNCISSFSPAFSQTPFGASRRRHVDFVPPC----KFLRDLHESFASTAEKCIVFFHSLA 80
           +PN   S S AF+QTP   S + ++  +PP     K ++D H+S  S  EK   F HSLA
Sbjct: 21  IPNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLA 80

Query: 81  SENPFLNKLMSLSSELQSFHHQIHGMNSRNFR-ALSSHNFAAVLPGDSVAGLLVTNGIQN 140
           S+NP   + + LSSE      +I   N+   R A+S+H FAAVLPGDSVAGL+V NG+ N
Sbjct: 81  SKNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLIN 140

Query: 141 FLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFL 200
           FL+IYNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFL
Sbjct: 141 FLNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFL 200

Query: 201 VLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 241
           VLNAFTS+A ALP ELP           + G+    +S+ KW+RR
Sbjct: 201 VLNAFTSSAMALPCELP----------SADGAVSPASSETKWVRR 234

[Close]
BLAST of Cp4.1LG11g03480 vs. Swiss-Prot
Match: YMG11_ARATH (YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=YLMG1-1 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 1 

Query: 128 LVTNGIQNFLSIYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           +V  GI+ +L IY+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]
BLAST of Cp4.1LG11g03480 vs. Swiss-Prot
Match: YMG12_ARATH (YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=YLMG1-2 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 1 

Query: 106 NFRALSSHNFAAVLPGDSVAGLL------VTNGIQNFLSIYNTLLVVRLVLTWFPNTP-- 165
           +FR  S   FA++   D  AG L      V  G+  +L IY+ +L+VR++L+WFPN P  
Sbjct: 109 SFRTASPLFFASLR--DRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWD 168

Query: 166 PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTS 203
              +S +  LCDPYLN+FR IIPP+  TLD+SP+LAF VL    S
Sbjct: 169 RQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGS 211

[Close]
BLAST of Cp4.1LG11g03480 vs. Swiss-Prot
Match: YCF19_GUITH (Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 1 

Query: 128 LVTNGIQNFLSIYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           L+ +    FL IY  LL++R+ LTWFPN          LS + DPYL +FRGI+PPL G 
Sbjct: 7   LLFSSFIGFLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG- 66

Query: 188 LDLSPILAFLVL 198
           +D+SPIL F++L
Sbjct: 67  IDISPILGFILL 77

[Close]
BLAST of Cp4.1LG11g03480 vs. Swiss-Prot
Match: YLMG_BACSU (Uncharacterized membrane protein YlmG OS=Bacillus subtilis (strain 168) GN=ylmG PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.5e-06
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 

Query: 123 SVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSP-LSTLCDPYLNIFRGIIPP 182
           SV  LL+T        IY+  L++ + ++W P+T    V   L+++C+PYL  FR IIPP
Sbjct: 8   SVLSLLIT--------IYSFALIIYIFMSWVPSTRETAVGRFLASICEPYLEPFRKIIPP 67

Query: 183 LGGTLDLSPILAFLVLNAFTS 203
           +   LD+SPI+A LVL   T+
Sbjct: 68  I-AMLDISPIVAILVLRFATT 79

[Close]
BLAST of Cp4.1LG11g03480 vs. TrEMBL
Match: A0A0A0KDJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362410 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.4e-110
Identity = 204/253 (80.63%), Postives = 225/253 (88.93%), Query Frame = 1 

Query: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60
           MTP +SS+ NP+++STAF+F PNCISSFSPAFSQTP G SRRR ++F PPC FLR LHES
Sbjct: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60

Query: 61  FASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120
           FAST E CI  FHSLASENPFL+KL+SL SE   F +QIHGMNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSS AN  P KGS DLT+SQKKW++R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240

Query: 241 LQGSVENKADSAR 254
           LQGS +N AD+++
Sbjct: 241 LQGSEKNNADASQ 253

[Close]
BLAST of Cp4.1LG11g03480 vs. TrEMBL
Match: A0A067KCS5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07597 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.5e-68
Identity = 144/234 (61.54%), Postives = 173/234 (73.93%), Query Frame = 1 

Query: 19  SFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHESFASTAEKCIVFFHSLASE 78
           SF+PNC+   S   +Q PF    + +    P C  + +LH S  STA+KC+ F H  ASE
Sbjct: 14  SFMPNCVL-ISSWVAQNPFLKPLKPNNLASPNC-MIHELHTSLTSTADKCLRFLHLFASE 73

Query: 79  NPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLPGDSVAGLLVTNGIQNFLS 138
           NP L ++ SL S+  +   QI   N  N +++S+H FAA+LPGDSVAG++V NGI NFL+
Sbjct: 74  NPILKRIFSLPSDFSNHLAQIQCKNKCNGKSVSNHKFAAILPGDSVAGVVVANGILNFLN 133

Query: 139 IYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLN 198
           IYNTLL+VRLVLTWFPN+PPAIVSPLST+CDPYLNIFRGIIPPLGGTLDLSPILAFLVLN
Sbjct: 134 IYNTLLIVRLVLTWFPNSPPAIVSPLSTICDPYLNIFRGIIPPLGGTLDLSPILAFLVLN 193

Query: 199 AFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRRLQGSVENKADSA 253
           AFTSTAAALPAELP  N+S    TP     +LTTSQKKW+RRL G   NK+ S+
Sbjct: 194 AFTSTAAALPAELPKTNASQGRCTPQTSFSNLTTSQKKWMRRLYG---NKSHSS 242

[Close]
BLAST of Cp4.1LG11g03480 vs. TrEMBL
Match: W9RVQ9_9ROSA (Uncharacterized protein ycf19 OS=Morus notabilis GN=L484_018603 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.7e-67
Identity = 154/255 (60.39%), Postives = 178/255 (69.80%), Query Frame = 1 

Query: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPA----FSQTPFGASRRRHVDFVPPCKFL-- 60
           M P ESS  +   + TA +FV NC    S A    F ++P  + +    +F PP   L  
Sbjct: 1   MAPSESSS-SDNSNHTASNFVTNCGLLLSSAKFDPFLRSPLSSKKP---NFGPPNILLIG 60

Query: 61  RDLHESFASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHN 120
             L  S AS A KC+ FFHS AS+NP L K +SL  E  SF HQI   + RN  ++SSHN
Sbjct: 61  DHLQSSIASAATKCLRFFHSFASQNPLLQKALSLPHEFHSFCHQIRCRSYRNVNSISSHN 120

Query: 121 FAAVLPGDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNI 180
           FAAVLPGDSVAGL+V NGI NFL+IYNT+L+VRLVLTWFPN PP IVSPLST+CDPYLNI
Sbjct: 121 FAAVLPGDSVAGLVVANGIINFLNIYNTVLIVRLVLTWFPNVPPFIVSPLSTICDPYLNI 180

Query: 181 FRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQ 240
           FRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELP   S+    T S    DLT+S+
Sbjct: 181 FRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPAAESN--QQTCSSSFSDLTSSE 240

Query: 241 KKWIRRLQGSVENKA 250
           KKW+RRL G    K+
Sbjct: 241 KKWMRRLHGGNGTKS 249

[Close]
BLAST of Cp4.1LG11g03480 vs. TrEMBL
Match: A0A061GKI4_THECC (YGGT family protein OS=Theobroma cacao GN=TCM_037390 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.7e-65
Identity = 142/225 (63.11%), Postives = 170/225 (75.56%), Query Frame = 1 

Query: 29  SPAFSQTPFGASRRR----HVDFVPPCKFLRDLHESFASTAEKCIVFFHSLASENPFLNK 88
           S AF QTPF     R    ++  V P   +RDLH++  STA+K    F +   +NP    
Sbjct: 38  SSAFIQTPFAPPHLRPSKPNLAPVVPQNIIRDLHDAVVSTADK----FFNFLKQNPAFKN 97

Query: 89  LMSLSSELQSFHHQI--HGMNSR---NFRALSSHNFAAVLPGDSVAGLLVTNGIQNFLSI 148
           L+SLSS+ QSF +++  + +NSR   N+  LS+HNFAAVLPGDSVAG++V NGI NFL+I
Sbjct: 98  LLSLSSDFQSFCNEVTTYRINSRKVNNYSPLSNHNFAAVLPGDSVAGIVVANGILNFLNI 157

Query: 149 YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNA 208
           YNTLL+VRLVLTWFPN+PPAIVSPLST+CDPYLNIFRGIIPPLGGTLDLSPILAFLVLNA
Sbjct: 158 YNTLLIVRLVLTWFPNSPPAIVSPLSTICDPYLNIFRGIIPPLGGTLDLSPILAFLVLNA 217

Query: 209 FTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRRLQGS 245
           F+STAAALPAELPV    P +A+      DLT+SQKKW+RRL GS
Sbjct: 218 FSSTAAALPAELPVAGQPPKSASSPSLFTDLTSSQKKWMRRLNGS 258

[Close]
BLAST of Cp4.1LG11g03480 vs. TrEMBL
Match: A0A0J8FPY7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033840 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 7.4e-65
Identity = 143/236 (60.59%), Postives = 173/236 (73.31%), Query Frame = 1 

Query: 11  PRRSSTAFSFVPNCISSF---SPAFSQTPFGASRRRHVDFVPPCKFLRDLHESFASTAEK 70
           P    T    +PN ++ F   +P FS   F +    +V  + P + L + H++ ASTA+K
Sbjct: 7   PTSEKTTKCELPNLLAIFPVIAPTFSPQQFFSKPTSNVA-LSPVEVLHNFHKTIASTADK 66

Query: 71  CIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLPGDSVAGL 130
           C+ F H  A++NPFLNKL+S SS + +F  Q+H  + ++  +LSSHNFAAVLPGDSVAG+
Sbjct: 67  CLQFLHFSATQNPFLNKLLSFSSYIHNFS-QVHCRSHKSLNSLSSHNFAAVLPGDSVAGI 126

Query: 131 LVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLD 190
           +VTNGI NFL+IYNTLLVVRLVLTWFP+ PP IVSPLSTLCDPYLNIFRGIIPPLGGTLD
Sbjct: 127 VVTNGILNFLNIYNTLLVVRLVLTWFPSAPPQIVSPLSTLCDPYLNIFRGIIPPLGGTLD 186

Query: 191 LSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSK-GSFDLTTSQKKWIRRLQ 243
           LSPILAFL+LNAFTS AAALPAELP    S   +   K G  DLT+SQKKW  RLQ
Sbjct: 187 LSPILAFLLLNAFTSAAAALPAELPPAMVSHEGSQSLKPGLSDLTSSQKKWQTRLQ 240

[Close]
BLAST of Cp4.1LG11g03480 vs. TAIR10
Match: AT5G21920.1 (AT5G21920.1 YGGT family protein)

HSP 1 Score: 225.3 bits (573), Expect = 4.2e-59
Identity = 127/225 (56.44%), Postives = 155/225 (68.89%), Query Frame = 1 

Query: 21  VPNCISSFSPAFSQTPFGASRRRHVDFVPPC----KFLRDLHESFASTAEKCIVFFHSLA 80
           +PN   S S AF+QTP   S + ++  +PP     K ++D H+S  S  EK   F HSLA
Sbjct: 21  IPNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLA 80

Query: 81  SENPFLNKLMSLSSELQSFHHQIHGMNSRNFR-ALSSHNFAAVLPGDSVAGLLVTNGIQN 140
           S+NP   + + LSSE      +I   N+   R A+S+H FAAVLPGDSVAGL+V NG+ N
Sbjct: 81  SKNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLIN 140

Query: 141 FLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFL 200
           FL+IYNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFL
Sbjct: 141 FLNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFL 200

Query: 201 VLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 241
           VLNAFTS+A ALP ELP           + G+    +S+ KW+RR
Sbjct: 201 VLNAFTSSAMALPCELP----------SADGAVSPASSETKWVRR 234

[Close]
BLAST of Cp4.1LG11g03480 vs. TAIR10
Match: AT3G07430.1 (AT3G07430.1 YGGT family protein)

HSP 1 Score: 78.2 bits (191), Expect = 8.2e-15
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 1 

Query: 128 LVTNGIQNFLSIYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           +V  GI+ +L IY+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]
BLAST of Cp4.1LG11g03480 vs. TAIR10
Match: AT4G27990.1 (AT4G27990.1 YGGT family protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 1 

Query: 106 NFRALSSHNFAAVLPGDSVAGLL------VTNGIQNFLSIYNTLLVVRLVLTWFPNTP-- 165
           +FR  S   FA++   D  AG L      V  G+  +L IY+ +L+VR++L+WFPN P  
Sbjct: 109 SFRTASPLFFASLR--DRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWD 168

Query: 166 PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTS 203
              +S +  LCDPYLN+FR IIPP+  TLD+SP+LAF VL    S
Sbjct: 169 RQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGS 211

[Close]
BLAST of Cp4.1LG11g03480 vs. NCBI nr
Match: gi|659089495|ref|XP_008445540.1| (PREDICTED: uncharacterized protein LOC103488523 [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 2.2e-110
Identity = 207/251 (82.47%), Postives = 222/251 (88.45%), Query Frame = 1 

Query: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60
           MTP ESS+ NP+R+STAF+F PNCISSFSPAFSQTP G SRRR  +F  PC FLRDLHES
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120
           FAST E CI  FHS ASENPFL+KL+SL SE QSF  QIH MNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSS AN  P +GS DLT+SQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSVENKADS 252
           LQGS +N AD+
Sbjct: 241 LQGSGKNNADA 251

[Close]
BLAST of Cp4.1LG11g03480 vs. NCBI nr
Match: gi|449452935|ref|XP_004144214.1| (PREDICTED: uncharacterized protein LOC101210772 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 4.9e-110
Identity = 204/253 (80.63%), Postives = 225/253 (88.93%), Query Frame = 1 

Query: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60
           MTP +SS+ NP+++STAF+F PNCISSFSPAFSQTP G SRRR ++F PPC FLR LHES
Sbjct: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60

Query: 61  FASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120
           FAST E CI  FHSLASENPFL+KL+SL SE   F +QIHGMNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSS AN  P KGS DLT+SQKKW++R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240

Query: 241 LQGSVENKADSAR 254
           LQGS +N AD+++
Sbjct: 241 LQGSEKNNADASQ 253

[Close]
BLAST of Cp4.1LG11g03480 vs. NCBI nr
Match: gi|802629489|ref|XP_012077192.1| (PREDICTED: uncharacterized protein LOC105638080 [Jatropha curcas])

HSP 1 Score: 265.8 bits (678), Expect = 7.9e-68
Identity = 144/234 (61.54%), Postives = 173/234 (73.93%), Query Frame = 1 

Query: 19  SFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHESFASTAEKCIVFFHSLASE 78
           SF+PNC+   S   +Q PF    + +    P C  + +LH S  STA+KC+ F H  ASE
Sbjct: 14  SFMPNCVL-ISSWVAQNPFLKPLKPNNLASPNC-MIHELHTSLTSTADKCLRFLHLFASE 73

Query: 79  NPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLPGDSVAGLLVTNGIQNFLS 138
           NP L ++ SL S+  +   QI   N  N +++S+H FAA+LPGDSVAG++V NGI NFL+
Sbjct: 74  NPILKRIFSLPSDFSNHLAQIQCKNKCNGKSVSNHKFAAILPGDSVAGVVVANGILNFLN 133

Query: 139 IYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLN 198
           IYNTLL+VRLVLTWFPN+PPAIVSPLST+CDPYLNIFRGIIPPLGGTLDLSPILAFLVLN
Sbjct: 134 IYNTLLIVRLVLTWFPNSPPAIVSPLSTICDPYLNIFRGIIPPLGGTLDLSPILAFLVLN 193

Query: 199 AFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRRLQGSVENKADSA 253
           AFTSTAAALPAELP  N+S    TP     +LTTSQKKW+RRL G   NK+ S+
Sbjct: 194 AFTSTAAALPAELPKTNASQGRCTPQTSFSNLTTSQKKWMRRLYG---NKSHSS 242

[Close]
BLAST of Cp4.1LG11g03480 vs. NCBI nr
Match: gi|703105946|ref|XP_010098371.1| (Uncharacterized protein ycf19 [Morus notabilis])

HSP 1 Score: 263.5 bits (672), Expect = 3.9e-67
Identity = 154/255 (60.39%), Postives = 178/255 (69.80%), Query Frame = 1 

Query: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPA----FSQTPFGASRRRHVDFVPPCKFL-- 60
           M P ESS  +   + TA +FV NC    S A    F ++P  + +    +F PP   L  
Sbjct: 1   MAPSESSS-SDNSNHTASNFVTNCGLLLSSAKFDPFLRSPLSSKKP---NFGPPNILLIG 60

Query: 61  RDLHESFASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHN 120
             L  S AS A KC+ FFHS AS+NP L K +SL  E  SF HQI   + RN  ++SSHN
Sbjct: 61  DHLQSSIASAATKCLRFFHSFASQNPLLQKALSLPHEFHSFCHQIRCRSYRNVNSISSHN 120

Query: 121 FAAVLPGDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNI 180
           FAAVLPGDSVAGL+V NGI NFL+IYNT+L+VRLVLTWFPN PP IVSPLST+CDPYLNI
Sbjct: 121 FAAVLPGDSVAGLVVANGIINFLNIYNTVLIVRLVLTWFPNVPPFIVSPLSTICDPYLNI 180

Query: 181 FRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQ 240
           FRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELP   S+    T S    DLT+S+
Sbjct: 181 FRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPAAESN--QQTCSSSFSDLTSSE 240

Query: 241 KKWIRRLQGSVENKA 250
           KKW+RRL G    K+
Sbjct: 241 KKWMRRLHGGNGTKS 249

[Close]
BLAST of Cp4.1LG11g03480 vs. NCBI nr
Match: gi|645227548|ref|XP_008220572.1| (PREDICTED: uncharacterized protein LOC103320643 [Prunus mume])

HSP 1 Score: 261.2 bits (666), Expect = 1.9e-66
Identity = 148/244 (60.66%), Postives = 171/244 (70.08%), Query Frame = 1 

Query: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60
           M   ES          A +F PNC    S         AS  +  + V P     D+  S
Sbjct: 1   MAHSESVSATETPKPLASNFAPNCAMLLSSTNFAPFLRASPLKKPNLVLP-----DIPAS 60

Query: 61  FASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120
            AS  +KC+   HSLAS+NPFL+KL+SL SE QS  HQI     R    LS+HNFAAVLP
Sbjct: 61  IASATDKCLQLLHSLASQNPFLSKLLSLRSEFQSLCHQIRCRKHRQVEILSAHNFAAVLP 120

Query: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAGL+V NGI NFL++YNTLLVVRLVLTWFPN+PPAIV PLST+CDPYLNIFRG+IP
Sbjct: 121 GDSVAGLVVANGISNFLNLYNTLLVVRLVLTWFPNSPPAIVGPLSTICDPYLNIFRGLIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP  +S    A+P+ G  +L+TSQKKW+ R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPA-SSQQVTASPA-GITNLSTSQKKWMTR 237

Query: 241 LQGS 245
           LQG+
Sbjct: 241 LQGN 237

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g03480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YLMG2_ARATH7.4e-5856.44YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana GN=YLMG2 PE=2 SV=1[more]
YMG11_ARATH1.5e-1351.95YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=YLMG1-1 PE=2 ... [more]
YMG12_ARATH1.9e-1345.71YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=YLMG1-2 PE=2 ... [more]
YCF19_GUITH1.8e-0848.61Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1[more]
YLMG_BACSU6.5e-0640.74Uncharacterized membrane protein YlmG OS=Bacillus subtilis (strain 168) GN=ylmG ... [more]
BLAST of Cp4.1LG11g03480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDJ4_CUCSA3.4e-11080.63Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362410 PE=4 SV=1[more]
A0A067KCS5_JATCU5.5e-6861.54Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07597 PE=4 SV=1[more]
W9RVQ9_9ROSA2.7e-6760.39Uncharacterized protein ycf19 OS=Morus notabilis GN=L484_018603 PE=4 SV=1[more]
A0A061GKI4_THECC5.7e-6563.11YGGT family protein OS=Theobroma cacao GN=TCM_037390 PE=4 SV=1[more]
A0A0J8FPY7_BETVU7.4e-6560.59Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033840 PE=4 S... [more]
BLAST of Cp4.1LG11g03480 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G21920.14.2e-5956.44 YGGT family protein[more]
AT3G07430.18.2e-1551.95 YGGT family protein[more]
AT4G27990.11.1e-1445.71 YGGT family protein[more]
BLAST of Cp4.1LG11g03480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089495|ref|XP_008445540.1|2.2e-11082.47PREDICTED: uncharacterized protein LOC103488523 [Cucumis melo][more]
gi|449452935|ref|XP_004144214.1|4.9e-11080.63PREDICTED: uncharacterized protein LOC101210772 [Cucumis sativus][more]
gi|802629489|ref|XP_012077192.1|7.9e-6861.54PREDICTED: uncharacterized protein LOC105638080 [Jatropha curcas][more]
gi|703105946|ref|XP_010098371.1|3.9e-6760.39Uncharacterized protein ycf19 [Morus notabilis][more]
gi|645227548|ref|XP_008220572.1|1.9e-6660.66PREDICTED: uncharacterized protein LOC103320643 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g03480.1Cp4.1LG11g03480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 136..199
score: 1.3
NoneNo IPR availablePANTHERPTHR33219FAMILY NOT NAMEDcoord: 27..221
score: 4.4
NoneNo IPR availablePANTHERPTHR33219:SF4SUBFAMILY NOT NAMEDcoord: 27..221
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g03480Cucsa.056010Cucumber (Gy14) v1cgycpeB0068
Cp4.1LG11g03480CmaCh05G004130Cucurbita maxima (Rimu)cmacpeB766
Cp4.1LG11g03480CmoCh05G004250Cucurbita moschata (Rifu)cmocpeB720
Cp4.1LG11g03480Cla021968Watermelon (97103) v1cpewmB099
Cp4.1LG11g03480Csa6G362410Cucumber (Chinese Long) v2cpecuB119
Cp4.1LG11g03480MELO3C011488Melon (DHL92) v3.5.1cpemeB088
Cp4.1LG11g03480ClCG08G009800Watermelon (Charleston Gray)cpewcgB122
Cp4.1LG11g03480CSPI06G19050Wild cucumber (PI 183967)cpecpiB117
Cp4.1LG11g03480Lsi08G008310Bottle gourd (USVL1VR-Ls)cpelsiB098
Cp4.1LG11g03480MELO3C011488.2Melon (DHL92) v3.6.1cpemedB111
Cp4.1LG11g03480CsaV3_6G031930Cucumber (Chinese Long) v3cpecucB0131
Cp4.1LG11g03480Bhi04G001192Wax gourdcpewgoB0145
Cp4.1LG11g03480CsGy6G018490Cucumber (Gy14) v2cgybcpeB714
Cp4.1LG11g03480Carg09311Silver-seed gourdcarcpeB0199
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g03480Silver-seed gourdcarcpeB1352
Cp4.1LG11g03480Wax gourdcpewgoB0138