Cp4.1LG10g11840 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG10g11840
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCysteine proteinase inhibitor
LocationCp4.1LG10 : 8625871 .. 8626257 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCTGTTGAAGTTTCTCATGGACAAGACGATGCCGGGCTCCAAGCTTGCAAGCCTCATGATTGGAAATCAATAGAAGATATCAAAGACCCGTACGTGCAAGAGATTGGAAGGTTTGCAATGACGAAGTTTATACACAATCAAACGGGGAAAGCGTGGACGTTCGTTCGTGTAGTGAATGGCGAGACTCTAGCCGTGGTGGAAGGAACGTTATACCGTGTGGTTATAGAGGTGAAAACCGATATAGTTGTTCAATCTTATCAAGGTTCTATTGAATTGTATGTGGCTAAGGTGCTAGATCATAAACAACCTCGCAAATCTTGGGAACTCTTAGCTTTTGAAAGCTCTGCCCTTCTAGCTTTGCCTTGTGGCTTAGCCATCTAG

mRNA sequence

ATGAGTTCTGTTGAAGTTTCTCATGGACAAGACGATGCCGGGCTCCAAGCTTGCAAGCCTCATGATTGGAAATCAATAGAAGATATCAAAGACCCGTACGTGCAAGAGATTGGAAGGTTTGCAATGACGAAGTTTATACACAATCAAACGGGGAAAGCGTGGACGTTCGTTCGTGTAGTGAATGGCGAGACTCTAGCCGTGGTGGAAGGAACGTTATACCGTGTGGTTATAGAGGTGAAAACCGATATAGTTGTTCAATCTTATCAAGGTTCTATTGAATTGTATGTGGCTAAGGTGCTAGATCATAAACAACCTCGCAAATCTTGGGAACTCTTAGCTTTTGAAAGCTCTGCCCTTCTAGCTTTGCCTTGTGGCTTAGCCATCTAG

Coding sequence (CDS)

ATGAGTTCTGTTGAAGTTTCTCATGGACAAGACGATGCCGGGCTCCAAGCTTGCAAGCCTCATGATTGGAAATCAATAGAAGATATCAAAGACCCGTACGTGCAAGAGATTGGAAGGTTTGCAATGACGAAGTTTATACACAATCAAACGGGGAAAGCGTGGACGTTCGTTCGTGTAGTGAATGGCGAGACTCTAGCCGTGGTGGAAGGAACGTTATACCGTGTGGTTATAGAGGTGAAAACCGATATAGTTGTTCAATCTTATCAAGGTTCTATTGAATTGTATGTGGCTAAGGTGCTAGATCATAAACAACCTCGCAAATCTTGGGAACTCTTAGCTTTTGAAAGCTCTGCCCTTCTAGCTTTGCCTTGTGGCTTAGCCATCTAG

Protein sequence

MSSVEVSHGQDDAGLQACKPHDWKSIEDIKDPYVQEIGRFAMTKFIHNQTGKAWTFVRVVNGETLAVVEGTLYRVVIEVKTDIVVQSYQGSIELYVAKVLDHKQPRKSWELLAFESSALLALPCGLAI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g11840.1Cp4.1LG10g11840.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 26..89
score: 3.2
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 23..100
score: 1.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 22..114
score: 1.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g11840MELO3C026868Melon (DHL92) v3.5.1cpemeB064
Cp4.1LG10g11840ClCG04G000400Watermelon (Charleston Gray)cpewcgB079
Cp4.1LG10g11840Lsi01G019050Bottle gourd (USVL1VR-Ls)cpelsiB055
Cp4.1LG10g11840MELO3C026868.2Melon (DHL92) v3.6.1cpemedB085
Cp4.1LG10g11840Bhi03G002119Wax gourdcpewgoB0093
The following gene(s) are paralogous to this gene:

None