Cp4.1LG10g11570 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g11570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTransmembrane protein, putative
LocationCp4.1LG10 : 8783669 .. 8783965 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGCGACAGCAGCAAATCAAATGCAGCCGCTGCCGGACCCAACTCCGGCGACGGCGACTGAGCCATCCCACTCTGGTCAGTCCATCCAGACGCTGGTGGTGGTGCTGGCAGTCATCATAATTTTGGGTGTCATTGCTCGGATCTTGGCTCGCTTCTGCGGCGGAAACCATTCCGGCGGCGGTGGTGCTGACGGAGAAAATGACATTGAAGGTTGGGTAGAAAGAACGTGCAGGAGCTGCATTGACGGCGGCGTCGCTACTCCGCCGCCGGAAGCGGCGGAGGAGAAGAAGTGA

mRNA sequence

ATGTGGGCGACAGCAGCAAATCAAATGCAGCCGCTGCCGGACCCAACTCCGGCGACGGCGACTGAGCCATCCCACTCTGGTCAGTCCATCCAGACGCTGGTGGTGGTGCTGGCAGTCATCATAATTTTGGGTGTCATTGCTCGGATCTTGGCTCGCTTCTGCGGCGGAAACCATTCCGGCGGCGGTGGTGCTGACGGAGAAAATGACATTGAAGGTTGGGTAGAAAGAACGTGCAGGAGCTGCATTGACGGCGGCGTCGCTACTCCGCCGCCGGAAGCGGCGGAGGAGAAGAAGTGA

Coding sequence (CDS)

ATGTGGGCGACAGCAGCAAATCAAATGCAGCCGCTGCCGGACCCAACTCCGGCGACGGCGACTGAGCCATCCCACTCTGGTCAGTCCATCCAGACGCTGGTGGTGGTGCTGGCAGTCATCATAATTTTGGGTGTCATTGCTCGGATCTTGGCTCGCTTCTGCGGCGGAAACCATTCCGGCGGCGGTGGTGCTGACGGAGAAAATGACATTGAAGGTTGGGTAGAAAGAACGTGCAGGAGCTGCATTGACGGCGGCGTCGCTACTCCGCCGCCGGAAGCGGCGGAGGAGAAGAAGTGA

Protein sequence

MWATAANQMQPLPDPTPATATEPSHSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGADGENDIEGWVERTCRSCIDGGVATPPPEAAEEKK
Homology
[Close]
BLAST of Cp4.1LG10g11570 vs. TrEMBL
Match: A0A067JT86_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21076 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-20
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1 

Query: 3  ATAANQMQPL--PDPTPATATEPSHSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSG 62
          A+   Q+QP+  P PTPATA    +S +SI+TLVVVLAVI I+GVIA I+AR CGG H  
Sbjct: 6  ASLHEQLQPILEPPPTPATAEPNRYSHRSIETLVVVLAVITIVGVIAGIIARLCGGRHF- 65

Query: 63 GGGADGENDIEGWVERTCRSCIDGGVATPPP 92
            G++GE+DIEGW+ER CRSCIDGG+  PPP
Sbjct: 66 --GSNGEHDIEGWIERRCRSCIDGGLPPPPP 93

[Close]
BLAST of Cp4.1LG10g11570 vs. TrEMBL
Match: W9RIY6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018005 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-19
Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 1 

Query: 6  ANQMQPLPDPTPATATEPS--HSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGG 65
          ++Q+QP+ +  PA  +E S  ++ +SI+TLVVVLAVI I+GVIA I+AR CGG H GG  
Sbjct: 2  SDQLQPMVEGPPAAVSEDSERYAHRSIETLVVVLAVITIVGVIAGIVARLCGGRHFGG-- 61

Query: 66 ADGENDIEGWVERTCRSCIDGGVATPPPEAAEEKK 99
           +GE+DIEGWVER CRSCIDGG+ T    AAEE K
Sbjct: 62 -NGEHDIEGWVERKCRSCIDGGIPTAAAAAAEESK 93

[Close]
BLAST of Cp4.1LG10g11570 vs. TrEMBL
Match: A0A161ZY63_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020485 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-19
Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 1 

Query: 7   NQMQPLPDPTPATAT-EPSHSGQS-----IQTLVVVLAVIIILGVIARILARFCGGNHSG 66
           NQ+QPL +  P  A  EPS S +S     I+TLVVVLAVIII+GVIA I+AR CGG H G
Sbjct: 14  NQVQPLVETPPVAAVVEPSQSSRSSTHKSIETLVVVLAVIIIVGVIAGIIARLCGGRHYG 73

Query: 67  GGGADGENDIEGWVERTCRSCIDGGVA-TPPPEAAEEKK 99
           G   +GE+DIEGWVER CR+CID GVA T  P AAEE K
Sbjct: 74  G---NGEHDIEGWVERKCRNCIDAGVADTAKPAAAEETK 109

[Close]
BLAST of Cp4.1LG10g11570 vs. TrEMBL
Match: A0A061EXZ9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024712 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.9e-19
Identity = 54/83 (65.06%), Postives = 62/83 (74.70%), Query Frame = 1 

Query: 17 PATATEPS-HSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGADGENDIEGWVE 76
          P T  EPS +S +SI+TL+VVLAVI I+GVIA I+AR CGG H GG   +GENDIEGW+E
Sbjct: 16 PPTVREPSRYSHRSIETLIVVLAVITIIGVIAGIIARLCGGRHFGG---NGENDIEGWIE 75

Query: 77 RTCRSCIDGGVATPPPEAAEEKK 99
          R CRSCIDGGV T  P  AE  K
Sbjct: 76 RKCRSCIDGGVTTAAPSPAEGSK 95

[Close]
BLAST of Cp4.1LG10g11570 vs. TrEMBL
Match: A0A022PSI8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018000mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-18
Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 1 

Query: 6  ANQMQPLPDPTP-ATATEP-SHS-GQSIQTLVVVLAVIIILGVIARILARFCGGNHSGGG 65
          ANQ+ PL +P P A   EP SHS   SI+TLVVVLAVI ILGVIA ++AR CGG H GG 
Sbjct: 4  ANQLPPLVEPPPPAVEVEPISHSTSHSIETLVVVLAVITILGVIAGVIARLCGGRHVGG- 63

Query: 66 GADGENDIEGWVERTCRSCIDGGVAT--PPPEAAEEKK 99
             GE+D+EGWVER CRSCID G+ T  PPP A   K+
Sbjct: 64 --HGEHDVEGWVERKCRSCIDDGITTAPPPPPAPPAKE 98

[Close]
BLAST of Cp4.1LG10g11570 vs. TAIR10
Match: AT3G57500.1 (AT3G57500.1 unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 3.4e-17
Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 1 

Query: 17  PATATEPSHSG--QSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGADGENDIEGWV 76
           P +  +PSH+   +SI+TLVVVLAVI IL V+A + AR CGG H   G   G++DIEGWV
Sbjct: 23  PPSQDQPSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRHLSHG---GDHDIEGWV 82

Query: 77  ERTCRSCIDGGVAT----------PPPEAAEEK 98
           ER CRSCID G+            PPP  AEE+
Sbjct: 83  ERKCRSCIDAGIPAVSAAPSPPPPPPPATAEER 112

[Close]
BLAST of Cp4.1LG10g11570 vs. NCBI nr
Match: gi|802727791|ref|XP_012086145.1| (PREDICTED: branchpoint-bridging protein [Jatropha curcas])

HSP 1 Score: 105.9 bits (263), Expect = 4.0e-20
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1 

Query: 3  ATAANQMQPL--PDPTPATATEPSHSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSG 62
          A+   Q+QP+  P PTPATA    +S +SI+TLVVVLAVI I+GVIA I+AR CGG H  
Sbjct: 6  ASLHEQLQPILEPPPTPATAEPNRYSHRSIETLVVVLAVITIVGVIAGIIARLCGGRHF- 65

Query: 63 GGGADGENDIEGWVERTCRSCIDGGVATPPP 92
            G++GE+DIEGW+ER CRSCIDGG+  PPP
Sbjct: 66 --GSNGEHDIEGWIERRCRSCIDGGLPPPPP 93

[Close]
BLAST of Cp4.1LG10g11570 vs. NCBI nr
Match: gi|731399919|ref|XP_010653790.1| (PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera])

HSP 1 Score: 105.9 bits (263), Expect = 4.0e-20
Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 1 

Query: 8   QMQPLPDPTPATATEPSHSG-QSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGADG 67
           Q+ PL    PA   EPSHS  +SI+TLVVVLAVI I+GVIA I+AR CGG H GG   +G
Sbjct: 15  QLPPLVQAPPAVG-EPSHSTHRSIETLVVVLAVITIVGVIAGIIARLCGGRHFGG---NG 74

Query: 68  ENDIEGWVERTCRSCIDGGV--ATPPPEAAEEKK 99
           ENDIEGWVER CRSCIDGG+  A PPP  AEE K
Sbjct: 75  ENDIEGWVERKCRSCIDGGIPAAPPPPPPAEESK 104

[Close]
BLAST of Cp4.1LG10g11570 vs. NCBI nr
Match: gi|703122268|ref|XP_010102535.1| (hypothetical protein L484_018005 [Morus notabilis])

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-19
Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 1 

Query: 6  ANQMQPLPDPTPATATEPS--HSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGG 65
          ++Q+QP+ +  PA  +E S  ++ +SI+TLVVVLAVI I+GVIA I+AR CGG H GG  
Sbjct: 2  SDQLQPMVEGPPAAVSEDSERYAHRSIETLVVVLAVITIVGVIAGIVARLCGGRHFGG-- 61

Query: 66 ADGENDIEGWVERTCRSCIDGGVATPPPEAAEEKK 99
           +GE+DIEGWVER CRSCIDGG+ T    AAEE K
Sbjct: 62 -NGEHDIEGWVERKCRSCIDGGIPTAAAAAAEESK 93

[Close]
BLAST of Cp4.1LG10g11570 vs. NCBI nr
Match: gi|743817160|ref|XP_011020353.1| (PREDICTED: uncharacterized protein LOC105122764 [Populus euphratica])

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-19
Identity = 54/90 (60.00%), Postives = 62/90 (68.89%), Query Frame = 1 

Query: 8  QMQPLPDPTPATATEPSHSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGADGE 67
          Q+ P+  P PA A    ++  SI+TLVVVLAVI I  VIA ILAR CGG H GG   +GE
Sbjct: 11 QLTPVVQPPPAVAKPSGNTNHSIETLVVVLAVITIAAVIAGILARLCGGRHFGG---NGE 70

Query: 68 NDIEGWVERTCRSCIDGGVATPPPEAAEEK 98
          +DIEGWVE  CRSCIDGG+  PPP  AE K
Sbjct: 71 HDIEGWVESRCRSCIDGGIPAPPPPPAEAK 97

[Close]
BLAST of Cp4.1LG10g11570 vs. NCBI nr
Match: gi|1021034366|gb|KZM92150.1| (hypothetical protein DCAR_020485 [Daucus carota subsp. sativus])

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-19
Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 1 

Query: 7   NQMQPLPDPTPATAT-EPSHSGQS-----IQTLVVVLAVIIILGVIARILARFCGGNHSG 66
           NQ+QPL +  P  A  EPS S +S     I+TLVVVLAVIII+GVIA I+AR CGG H G
Sbjct: 14  NQVQPLVETPPVAAVVEPSQSSRSSTHKSIETLVVVLAVIIIVGVIAGIIARLCGGRHYG 73

Query: 67  GGGADGENDIEGWVERTCRSCIDGGVA-TPPPEAAEEKK 99
           G   +GE+DIEGWVER CR+CID GVA T  P AAEE K
Sbjct: 74  G---NGEHDIEGWVERKCRNCIDAGVADTAKPAAAEETK 109

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g11570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG10g11570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067JT86_JATCU2.8e-2061.54Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21076 PE=4 SV=1[more]
W9RIY6_9ROSA3.1e-1958.95Uncharacterized protein OS=Morus notabilis GN=L484_018005 PE=4 SV=1[more]
A0A161ZY63_DAUCA4.1e-1962.63Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020485 PE=4 SV=1[more]
A0A061EXZ9_THECC6.9e-1965.06Uncharacterized protein OS=Theobroma cacao GN=TCM_024712 PE=4 SV=1[more]
A0A022PSI8_ERYGU1.2e-1861.22Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018000mg PE=4 SV=1[more]
BLAST of Cp4.1LG10g11570 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57500.13.4e-1751.61 unknown protein[more]
BLAST of Cp4.1LG10g11570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|802727791|ref|XP_012086145.1|4.0e-2061.54PREDICTED: branchpoint-bridging protein [Jatropha curcas][more]
gi|731399919|ref|XP_010653790.1|4.0e-2065.96PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera][more]
gi|703122268|ref|XP_010102535.1|4.5e-1958.95hypothetical protein L484_018005 [Morus notabilis][more]
gi|743817160|ref|XP_011020353.1|4.5e-1960.00PREDICTED: uncharacterized protein LOC105122764 [Populus euphratica][more]
gi|1021034366|gb|KZM92150.1|5.8e-1962.63hypothetical protein DCAR_020485 [Daucus carota subsp. sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g11570.1Cp4.1LG10g11570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33429FAMILY NOT NAMEDcoord: 7..97
score: 6.4
NoneNo IPR availablePANTHERPTHR33429:SF2SUBFAMILY NOT NAMEDcoord: 7..97
score: 6.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g11570Lsi01G018520Bottle gourd (USVL1VR-Ls)cpelsiB051
Cp4.1LG10g11570CsaV3_4G011800Cucumber (Chinese Long) v3cpecucB0086
Cp4.1LG10g11570Carg22459Silver-seed gourdcarcpeB0276
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g11570Wax gourdcpewgoB0088
Cp4.1LG10g11570Wax gourdcpewgoB0093
Cp4.1LG10g11570Cucurbita pepo (Zucchini)cpecpeB085
Cp4.1LG10g11570Cucumber (Gy14) v1cgycpeB0451
Cp4.1LG10g11570Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g11570Cucurbita maxima (Rimu)cmacpeB863
Cp4.1LG10g11570Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g11570Cucurbita moschata (Rifu)cmocpeB803
Cp4.1LG10g11570Wild cucumber (PI 183967)cpecpiB069
Cp4.1LG10g11570Wild cucumber (PI 183967)cpecpiB077
Cp4.1LG10g11570Cucumber (Chinese Long) v2cpecuB074
Cp4.1LG10g11570Cucumber (Chinese Long) v2cpecuB080
Cp4.1LG10g11570Bottle gourd (USVL1VR-Ls)cpelsiB055
Cp4.1LG10g11570Watermelon (97103) v1cpewmB085
Cp4.1LG10g11570Watermelon (97103) v1cpewmB087
Cp4.1LG10g11570Watermelon (97103) v1cpewmB090
Cp4.1LG10g11570Melon (DHL92) v3.5.1cpemeB064
Cp4.1LG10g11570Melon (DHL92) v3.5.1cpemeB072
Cp4.1LG10g11570Cucumber (Gy14) v2cgybcpeB467
Cp4.1LG10g11570Cucumber (Gy14) v2cgybcpeB475
Cp4.1LG10g11570Melon (DHL92) v3.6.1cpemedB094
Cp4.1LG10g11570Melon (DHL92) v3.6.1cpemedB085
Cp4.1LG10g11570Silver-seed gourdcarcpeB0398
Cp4.1LG10g11570Cucumber (Chinese Long) v3cpecucB0079