Cp4.1LG10g11570.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGCGACAGCAGCAAATCAAATGCAGCCGCTGCCGGACCCAACTCCGGCGACGGCGACTGAGCCATCCCACTCTGGTCAGTCCATCCAGACGCTGGTGGTGGTGCTGGCAGTCATCATAATTTTGGGTGTCATTGCTCGGATCTTGGCTCGCTTCTGCGGCGGAAACCATTCCGGCGGCGGTGGTGCTGACGGAGAAAATGACATTGAAGGTTGGGTAGAAAGAACGTGCAGGAGCTGCATTGACGGCGGCGTCGCTACTCCGCCGCCGGAAGCGGCGGAGGAGAAGAAGTGA ATGTGGGCGACAGCAGCAAATCAAATGCAGCCGCTGCCGGACCCAACTCCGGCGACGGCGACTGAGCCATCCCACTCTGGTCAGTCCATCCAGACGCTGGTGGTGGTGCTGGCAGTCATCATAATTTTGGGTGTCATTGCTCGGATCTTGGCTCGCTTCTGCGGCGGAAACCATTCCGGCGGCGGTGGTGCTGACGGAGAAAATGACATTGAAGGTTGGGTAGAAAGAACGTGCAGGAGCTGCATTGACGGCGGCGTCGCTACTCCGCCGCCGGAAGCGGCGGAGGAGAAGAAGTGA ATGTGGGCGACAGCAGCAAATCAAATGCAGCCGCTGCCGGACCCAACTCCGGCGACGGCGACTGAGCCATCCCACTCTGGTCAGTCCATCCAGACGCTGGTGGTGGTGCTGGCAGTCATCATAATTTTGGGTGTCATTGCTCGGATCTTGGCTCGCTTCTGCGGCGGAAACCATTCCGGCGGCGGTGGTGCTGACGGAGAAAATGACATTGAAGGTTGGGTAGAAAGAACGTGCAGGAGCTGCATTGACGGCGGCGTCGCTACTCCGCCGCCGGAAGCGGCGGAGGAGAAGAAGTGA MWATAANQMQPLPDPTPATATEPSHSGQSIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGADGENDIEGWVERTCRSCIDGGVATPPPEAAEEKK
BLAST of Cp4.1LG10g11570.1 vs. TrEMBL
Match: A0A067JT86_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21076 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 2.8e-20 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. TrEMBL
Match: W9RIY6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018005 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.1e-19 Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. TrEMBL
Match: A0A161ZY63_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020485 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 4.1e-19 Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. TrEMBL
Match: A0A061EXZ9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024712 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-19 Identity = 54/83 (65.06%), Postives = 62/83 (74.70%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. TrEMBL
Match: A0A022PSI8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018000mg PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.2e-18 Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. TAIR10
Match: AT3G57500.1 (AT3G57500.1 unknown protein) HSP 1 Score: 84.7 bits (208), Expect = 3.4e-17 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. NCBI nr
Match: gi|802727791|ref|XP_012086145.1| (PREDICTED: branchpoint-bridging protein [Jatropha curcas]) HSP 1 Score: 105.9 bits (263), Expect = 4.0e-20 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. NCBI nr
Match: gi|731399919|ref|XP_010653790.1| (PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera]) HSP 1 Score: 105.9 bits (263), Expect = 4.0e-20 Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. NCBI nr
Match: gi|703122268|ref|XP_010102535.1| (hypothetical protein L484_018005 [Morus notabilis]) HSP 1 Score: 102.4 bits (254), Expect = 4.5e-19 Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. NCBI nr
Match: gi|743817160|ref|XP_011020353.1| (PREDICTED: uncharacterized protein LOC105122764 [Populus euphratica]) HSP 1 Score: 102.4 bits (254), Expect = 4.5e-19 Identity = 54/90 (60.00%), Postives = 62/90 (68.89%), Query Frame = 1
BLAST of Cp4.1LG10g11570.1 vs. NCBI nr
Match: gi|1021034366|gb|KZM92150.1| (hypothetical protein DCAR_020485 [Daucus carota subsp. sativus]) HSP 1 Score: 102.1 bits (253), Expect = 5.8e-19 Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
|