Cp4.1LG10g10470 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGGCCTCTCAATCCCTGCAATAAATAATGACTCATTATCTGTTCTTTGTGCTTTTAATCTTTTGCATAGCATCTGCAGCGAGAAGAACGACTGTACAGCCATGTCTCGGATTGATGATTTACCATATTCTAGGCCACCAAAACAAAAAGCTTCGCACCAAAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGATCCCAACGATCGAATTAAGGGGTCATTTCCAGCACAAACACCTCAGAAGTCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCGCTCCAGCAGCCCGAAAGGTCGAATTCGGATTCGCTGCCAGATTCTTCATCTGCATCTGGGAATGAGTACCGTGTTTTAAGAAGGAAATATTTGCTCCTGGAGGAAGAGAGCTTTTCTCTGGGAACAGAACTTAAAGAAGTTGAAGATGAGGTGAAGGCCCTTGAAGAAGAAAAGCTTGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGCTCAGAACTGCAGCTTGCCCACTCAAATTTACCTCCACCTTAG ATGTTCGGCCTCTCAATCCCTGCAATAAATAATGACTCATTATCTGTTCTTTGTGCTTTTAATCTTTTGCATAGCATCTGCAGCGAGAAGAACGACTGTACAGCCATGTCTCGGATTGATGATTTACCATATTCTAGGCCACCAAAACAAAAAGCTTCGCACCAAAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGATCCCAACGATCGAATTAAGGGGTCATTTCCAGCACAAACACCTCAGAAGTCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCGCTCCAGCAGCCCGAAAGGTCGAATTCGGATTCGCTGCCAGATTCTTCATCTGCATCTGGGAATGAGTACCGTGTTTTAAGAAGGAAATATTTGCTCCTGGAGGAAGAGAGCTTTTCTCTGGGAACAGAACTTAAAGAAGTTGAAGATGAGGTGAAGGCCCTTGAAGAAGAAAAGCTTGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGCTCAGAACTGCAGCTTGCCCACTCAAATTTACCTCCACCTTAG ATGTTCGGCCTCTCAATCCCTGCAATAAATAATGACTCATTATCTGTTCTTTGTGCTTTTAATCTTTTGCATAGCATCTGCAGCGAGAAGAACGACTGTACAGCCATGTCTCGGATTGATGATTTACCATATTCTAGGCCACCAAAACAAAAAGCTTCGCACCAAAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGATCCCAACGATCGAATTAAGGGGTCATTTCCAGCACAAACACCTCAGAAGTCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCGCTCCAGCAGCCCGAAAGGTCGAATTCGGATTCGCTGCCAGATTCTTCATCTGCATCTGGGAATGAGTACCGTGTTTTAAGAAGGAAATATTTGCTCCTGGAGGAAGAGAGCTTTTCTCTGGGAACAGAACTTAAAGAAGTTGAAGATGAGGTGAAGGCCCTTGAAGAAGAAAAGCTTGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGCTCAGAACTGCAGCTTGCCCACTCAAATTTACCTCCACCTTAG MFGLSIPAINNDSLSVLCAFNLLHSICSEKNDCTAMSRIDDLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSVALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKLGLLDELLVLEGLIDRSELQLAHSNLPPP
BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A0A0KMU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510240 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.8e-61 Identity = 133/146 (91.10%), Postives = 136/146 (93.15%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A0D2LWF7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G086400 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.8e-29 Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A067JZC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24287 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 6.2e-29 Identity = 84/131 (64.12%), Postives = 99/131 (75.57%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: B9SRB7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0613720 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28 Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A0D2SFT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G185900 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.0e-28 Identity = 86/141 (60.99%), Postives = 106/141 (75.18%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. TAIR10
Match: AT3G51500.1 (AT3G51500.1 unknown protein) HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18 Identity = 61/123 (49.59%), Postives = 76/123 (61.79%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|659080706|ref|XP_008440937.1| (PREDICTED: uncharacterized protein LOC103485204 [Cucumis melo]) HSP 1 Score: 248.8 bits (634), Expect = 7.2e-63 Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|778719986|ref|XP_011658091.1| (PREDICTED: uncharacterized protein LOC101212199 [Cucumis sativus]) HSP 1 Score: 243.0 bits (619), Expect = 3.9e-61 Identity = 133/146 (91.10%), Postives = 136/146 (93.15%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|823122589|ref|XP_012471731.1| (PREDICTED: uncharacterized protein LOC105789062 [Gossypium raimondii]) HSP 1 Score: 136.7 bits (343), Expect = 4.0e-29 Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|802748731|ref|XP_012087564.1| (PREDICTED: uncharacterized protein LOC105646330 [Jatropha curcas]) HSP 1 Score: 135.6 bits (340), Expect = 8.9e-29 Identity = 84/131 (64.12%), Postives = 99/131 (75.57%), Query Frame = 1
BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|223532038|gb|EEF33848.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 134.8 bits (338), Expect = 1.5e-28 Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|