Cp4.1LG10g10470 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG10g10470
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG10 : 4127832 .. 4128383 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGCCTCTCAATCCCTGCAATAAATAATGACTCATTATCTGTTCTTTGTGCTTTTAATCTTTTGCATAGCATCTGCAGCGAGAAGAACGACTGTACAGCCATGTCTCGGATTGATGATTTACCATATTCTAGGCCACCAAAACAAAAAGCTTCGCACCAAAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGATCCCAACGATCGAATTAAGGGGTCATTTCCAGCACAAACACCTCAGAAGTCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCGCTCCAGCAGCCCGAAAGGTCGAATTCGGATTCGCTGCCAGATTCTTCATCTGCATCTGGGAATGAGTACCGTGTTTTAAGAAGGAAATATTTGCTCCTGGAGGAAGAGAGCTTTTCTCTGGGAACAGAACTTAAAGAAGTTGAAGATGAGGTGAAGGCCCTTGAAGAAGAAAAGCTTGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGCTCAGAACTGCAGCTTGCCCACTCAAATTTACCTCCACCTTAG

mRNA sequence

ATGTTCGGCCTCTCAATCCCTGCAATAAATAATGACTCATTATCTGTTCTTTGTGCTTTTAATCTTTTGCATAGCATCTGCAGCGAGAAGAACGACTGTACAGCCATGTCTCGGATTGATGATTTACCATATTCTAGGCCACCAAAACAAAAAGCTTCGCACCAAAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGATCCCAACGATCGAATTAAGGGGTCATTTCCAGCACAAACACCTCAGAAGTCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCGCTCCAGCAGCCCGAAAGGTCGAATTCGGATTCGCTGCCAGATTCTTCATCTGCATCTGGGAATGAGTACCGTGTTTTAAGAAGGAAATATTTGCTCCTGGAGGAAGAGAGCTTTTCTCTGGGAACAGAACTTAAAGAAGTTGAAGATGAGGTGAAGGCCCTTGAAGAAGAAAAGCTTGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGCTCAGAACTGCAGCTTGCCCACTCAAATTTACCTCCACCTTAG

Coding sequence (CDS)

ATGTTCGGCCTCTCAATCCCTGCAATAAATAATGACTCATTATCTGTTCTTTGTGCTTTTAATCTTTTGCATAGCATCTGCAGCGAGAAGAACGACTGTACAGCCATGTCTCGGATTGATGATTTACCATATTCTAGGCCACCAAAACAAAAAGCTTCGCACCAAAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGATCCCAACGATCGAATTAAGGGGTCATTTCCAGCACAAACACCTCAGAAGTCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCGCTCCAGCAGCCCGAAAGGTCGAATTCGGATTCGCTGCCAGATTCTTCATCTGCATCTGGGAATGAGTACCGTGTTTTAAGAAGGAAATATTTGCTCCTGGAGGAAGAGAGCTTTTCTCTGGGAACAGAACTTAAAGAAGTTGAAGATGAGGTGAAGGCCCTTGAAGAAGAAAAGCTTGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGCTCAGAACTGCAGCTTGCCCACTCAAATTTACCTCCACCTTAG

Protein sequence

MFGLSIPAINNDSLSVLCAFNLLHSICSEKNDCTAMSRIDDLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSVALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKLGLLDELLVLEGLIDRSELQLAHSNLPPP
BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A0A0KMU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510240 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.8e-61
Identity = 133/146 (91.10%), Postives = 136/146 (93.15%), Query Frame = 1

Query: 36  MSRIDDLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSV 95
           MSRIDDLPYSRPPKQKA HQKASTASH+Q KDP+DRIKGSFPAQT QK+SKRSLKNEPSV
Sbjct: 1   MSRIDDLPYSRPPKQKALHQKASTASHVQVKDPSDRIKGSFPAQTAQKASKRSLKNEPSV 60

Query: 96  ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 155
             QQPERSNSDSLPD SSASGNEYR LRRKYLLLEEESFSLG ELK VEDEVK LEEEKL
Sbjct: 61  VFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFSLGAELKGVEDEVKTLEEEKL 120

Query: 156 GLLDELLVLEGLIDRSELQLAHSNLP 182
           GLLDELLVLEGLIDRSELQLAHSNLP
Sbjct: 121 GLLDELLVLEGLIDRSELQLAHSNLP 145

BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A0D2LWF7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G086400 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-29
Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 1

Query: 71  RIKGSFPAQTPQKSSKRSLKNEPSVALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLE 130
           +++GS P +T +K+SKR+ KNE S   QQPERSNSDSLPDSS+ SGNEYR LRRKYLLLE
Sbjct: 42  QVQGSVPLRTGKKTSKRNSKNEISPIFQQPERSNSDSLPDSST-SGNEYRALRRKYLLLE 101

Query: 131 EESFSLGTELKEVEDEVKALEEEKLGLLDELLVLEGLIDRSELQ 175
           EESF+LG ELK+VEDEVKALE+EKL LLD+L+VLEGL+D SE+Q
Sbjct: 102 EESFTLGKELKDVEDEVKALEDEKLALLDQLVVLEGLMDPSEMQ 144

BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A067JZC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24287 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.2e-29
Identity = 84/131 (64.12%), Postives = 99/131 (75.57%), Query Frame = 1

Query: 41  DLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSVALQQP 100
           D+  S+P K+K    +AS  S LQG D  +  +   P +T QK+S+R+LKNE S  +QQ 
Sbjct: 11  DITKSKPHKKKVPASRASLIS-LQGNDLREVKQVQGPLRTSQKASRRNLKNEGSPLIQQQ 70

Query: 101 ERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKLGLLDE 160
           ERSNSDSLPDSS+ SGNEYR LRRKYLLLEEESF LG ELK VEDEVK LE+EKL LLD+
Sbjct: 71  ERSNSDSLPDSST-SGNEYRALRRKYLLLEEESFGLGKELKVVEDEVKTLEDEKLALLDQ 130

Query: 161 LLVLEGLIDRS 172
           L+VLEGLID S
Sbjct: 131 LVVLEGLIDPS 139

BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: B9SRB7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0613720 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28
Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1

Query: 41  DLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSVALQQP 100
           ++  S+P K+K S  +A+    LQG D  +      P +T QK+SKR+LKNE S  +QQ 
Sbjct: 11  EITNSKPRKKKVSTSRAALIP-LQGNDVREFHLVQAPLRTNQKASKRNLKNEGSPMIQQQ 70

Query: 101 ERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKLGLLDE 160
           ERSNSDSLPDSS+ SGNEYR LRRKYLLLEEESF LG ELK VEDEVK LE+EKL LLD+
Sbjct: 71  ERSNSDSLPDSST-SGNEYRALRRKYLLLEEESFGLGRELKVVEDEVKTLEDEKLALLDK 130

Query: 161 LLVLEGLIDRSEL 174
           L+VLEGLID SE+
Sbjct: 131 LVVLEGLIDPSEV 141

BLAST of Cp4.1LG10g10470 vs. TrEMBL
Match: A0A0D2SFT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G185900 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.0e-28
Identity = 86/141 (60.99%), Postives = 106/141 (75.18%), Query Frame = 1

Query: 39  IDDLPYSRPPKQ----KASHQKAST-ASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEP 98
           + D P   P +Q    K+  +K+ST  S L   + ND  K S P++T +K+SKR+ K E 
Sbjct: 1   MQDHPRMPPSEQGLNPKSRKKKSSTNKSALLPIERND-FKESVPSKTGKKTSKRNSKKEM 60

Query: 99  SVALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEE 158
           S   QQPERSNSDSLP+SS+ SGNEYR LRRKYLLLEEESF++G E+KEVEDEVKALE+E
Sbjct: 61  SPVFQQPERSNSDSLPESST-SGNEYRALRRKYLLLEEESFAMGKEMKEVEDEVKALEDE 120

Query: 159 KLGLLDELLVLEGLIDRSELQ 175
           KL LLD+L+VLEGLID SE+Q
Sbjct: 121 KLALLDQLVVLEGLIDPSEMQ 139

BLAST of Cp4.1LG10g10470 vs. TAIR10
Match: AT3G51500.1 (AT3G51500.1 unknown protein)

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18
Identity = 61/123 (49.59%), Postives = 76/123 (61.79%), Query Frame = 1

Query: 47  PPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSVALQQPERSNSD 106
           PP  +A   K  T      K P  ++    P +  +K S RS  N+      Q E S   
Sbjct: 7   PPFSEAKRMKIPTP-----KQPLTQL----PPRIGKKVSNRSKSNQVHAISHQLEMS--- 66

Query: 107 SLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKLGLLDELLVLEG 166
             P+S S+ GNEYR LRRKYLLLEE+SF+L  ELKE EDEVKALE+EKL LLD+L+V+EG
Sbjct: 67  --PNSDSSPGNEYRALRRKYLLLEEDSFALERELKEAEDEVKALEDEKLELLDKLVVMEG 115

Query: 167 LID 170
           L+D
Sbjct: 127 LVD 115

BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|659080706|ref|XP_008440937.1| (PREDICTED: uncharacterized protein LOC103485204 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 7.2e-63
Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 1

Query: 36  MSRIDDLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSV 95
           MSRIDDLPYSRPPKQKA HQKASTASHLQ KDP++RIKGSFPAQT QK+SKRSLKNEPS+
Sbjct: 1   MSRIDDLPYSRPPKQKALHQKASTASHLQLKDPSNRIKGSFPAQTAQKASKRSLKNEPSI 60

Query: 96  ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 155
             QQPERSNSDSLPDSSSASGNEYR LRRKYLLLEEESF+LG ELKEVEDEVK LEEEKL
Sbjct: 61  VFQQPERSNSDSLPDSSSASGNEYRALRRKYLLLEEESFTLGAELKEVEDEVKTLEEEKL 120

Query: 156 GLLDELLVLEGLIDRSELQLAHSNLP 182
           GLLDELLVLEGLIDRSELQLAHSNLP
Sbjct: 121 GLLDELLVLEGLIDRSELQLAHSNLP 146

BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|778719986|ref|XP_011658091.1| (PREDICTED: uncharacterized protein LOC101212199 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 3.9e-61
Identity = 133/146 (91.10%), Postives = 136/146 (93.15%), Query Frame = 1

Query: 36  MSRIDDLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSV 95
           MSRIDDLPYSRPPKQKA HQKASTASH+Q KDP+DRIKGSFPAQT QK+SKRSLKNEPSV
Sbjct: 1   MSRIDDLPYSRPPKQKALHQKASTASHVQVKDPSDRIKGSFPAQTAQKASKRSLKNEPSV 60

Query: 96  ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 155
             QQPERSNSDSLPD SSASGNEYR LRRKYLLLEEESFSLG ELK VEDEVK LEEEKL
Sbjct: 61  VFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFSLGAELKGVEDEVKTLEEEKL 120

Query: 156 GLLDELLVLEGLIDRSELQLAHSNLP 182
           GLLDELLVLEGLIDRSELQLAHSNLP
Sbjct: 121 GLLDELLVLEGLIDRSELQLAHSNLP 145

BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|823122589|ref|XP_012471731.1| (PREDICTED: uncharacterized protein LOC105789062 [Gossypium raimondii])

HSP 1 Score: 136.7 bits (343), Expect = 4.0e-29
Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 1

Query: 71  RIKGSFPAQTPQKSSKRSLKNEPSVALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLE 130
           +++GS P +T +K+SKR+ KNE S   QQPERSNSDSLPDSS+ SGNEYR LRRKYLLLE
Sbjct: 42  QVQGSVPLRTGKKTSKRNSKNEISPIFQQPERSNSDSLPDSST-SGNEYRALRRKYLLLE 101

Query: 131 EESFSLGTELKEVEDEVKALEEEKLGLLDELLVLEGLIDRSELQ 175
           EESF+LG ELK+VEDEVKALE+EKL LLD+L+VLEGL+D SE+Q
Sbjct: 102 EESFTLGKELKDVEDEVKALEDEKLALLDQLVVLEGLMDPSEMQ 144

BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|802748731|ref|XP_012087564.1| (PREDICTED: uncharacterized protein LOC105646330 [Jatropha curcas])

HSP 1 Score: 135.6 bits (340), Expect = 8.9e-29
Identity = 84/131 (64.12%), Postives = 99/131 (75.57%), Query Frame = 1

Query: 41  DLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSVALQQP 100
           D+  S+P K+K    +AS  S LQG D  +  +   P +T QK+S+R+LKNE S  +QQ 
Sbjct: 11  DITKSKPHKKKVPASRASLIS-LQGNDLREVKQVQGPLRTSQKASRRNLKNEGSPLIQQQ 70

Query: 101 ERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKLGLLDE 160
           ERSNSDSLPDSS+ SGNEYR LRRKYLLLEEESF LG ELK VEDEVK LE+EKL LLD+
Sbjct: 71  ERSNSDSLPDSST-SGNEYRALRRKYLLLEEESFGLGKELKVVEDEVKTLEDEKLALLDQ 130

Query: 161 LLVLEGLIDRS 172
           L+VLEGLID S
Sbjct: 131 LVVLEGLIDPS 139

BLAST of Cp4.1LG10g10470 vs. NCBI nr
Match: gi|223532038|gb|EEF33848.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-28
Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1

Query: 41  DLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSVALQQP 100
           ++  S+P K+K S  +A+    LQG D  +      P +T QK+SKR+LKNE S  +QQ 
Sbjct: 11  EITNSKPRKKKVSTSRAALIP-LQGNDVREFHLVQAPLRTNQKASKRNLKNEGSPMIQQQ 70

Query: 101 ERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKLGLLDE 160
           ERSNSDSLPDSS+ SGNEYR LRRKYLLLEEESF LG ELK VEDEVK LE+EKL LLD+
Sbjct: 71  ERSNSDSLPDSST-SGNEYRALRRKYLLLEEESFGLGRELKVVEDEVKTLEDEKLALLDK 130

Query: 161 LLVLEGLIDRSEL 174
           L+VLEGLID SE+
Sbjct: 131 LVVLEGLIDPSEV 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KMU4_CUCSA2.8e-6191.10Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510240 PE=4 SV=1[more]
A0A0D2LWF7_GOSRA2.8e-2973.08Uncharacterized protein OS=Gossypium raimondii GN=B456_001G086400 PE=4 SV=1[more]
A0A067JZC4_JATCU6.2e-2964.12Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24287 PE=4 SV=1[more]
B9SRB7_RICCO1.1e-2863.16Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0613720 PE=4 SV=1[more]
A0A0D2SFT8_GOSRA4.0e-2860.99Uncharacterized protein OS=Gossypium raimondii GN=B456_007G185900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G51500.15.7e-1849.59 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659080706|ref|XP_008440937.1|7.2e-6391.10PREDICTED: uncharacterized protein LOC103485204 [Cucumis melo][more]
gi|778719986|ref|XP_011658091.1|3.9e-6191.10PREDICTED: uncharacterized protein LOC101212199 [Cucumis sativus][more]
gi|823122589|ref|XP_012471731.1|4.0e-2973.08PREDICTED: uncharacterized protein LOC105789062 [Gossypium raimondii][more]
gi|802748731|ref|XP_012087564.1|8.9e-2964.12PREDICTED: uncharacterized protein LOC105646330 [Jatropha curcas][more]
gi|223532038|gb|EEF33848.1|1.5e-2863.16conserved hypothetical protein [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g10470.1Cp4.1LG10g10470.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 133..160
scor
NoneNo IPR availablePANTHERPTHR37740FAMILY NOT NAMEDcoord: 36..179
score: 3.4

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g10470Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g10470Silver-seed gourdcarcpeB0913
Cp4.1LG10g10470Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g10470Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g10470Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g10470Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g10470Watermelon (Charleston Gray)cpewcgB061