Cp4.1LG10g09230 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCCCTCCCTCCTCATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCGGGCGGCGGATTTGATGACATACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGATACGGCGGACCCAAAGGCGGTTACGGCAAGGGTGGAATCATAAGGAACACTGTGGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGGGCAAGGGATTCGGAGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCTCTAAGAAGTGTATTGGCTATTGTTAG ATGAATCCCTCCCTCCTCATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCGGGCGGCGGATTTGATGACATACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGATACGGCGGACCCAAAGGCGGTTACGGCAAGGGTGGAATCATAAGGAACACTGTGGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGGGCAAGGGATTCGGAGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCTCTAAGAAGTGTATTGGCTATTGTTAG ATGAATCCCTCCCTCCTCATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCGGGCGGCGGATTTGATGACATACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGATACGGCGGACCCAAAGGCGGTTACGGCAAGGGTGGAATCATAAGGAACACTGTGGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGGGCAAGGGATTCGGAGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCTCTAAGAAGTGTATTGGCTATTGTTAG MNPSLLISALLLAVLLLSPSASLAAGMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCSKKCIGYC
BLAST of Cp4.1LG10g09230 vs. TrEMBL
Match: A0A0A0KHJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516980 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.1e-50 Identity = 105/133 (78.95%), Postives = 112/133 (84.21%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. TrEMBL
Match: A0A067JDR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21379 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 3.8e-38 Identity = 79/100 (79.00%), Postives = 83/100 (83.00%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. TrEMBL
Match: C6SVW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G244800 PE=2 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 7.2e-37 Identity = 88/149 (59.06%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. TrEMBL
Match: V7BT50_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G190300g PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.2e-36 Identity = 77/100 (77.00%), Postives = 84/100 (84.00%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. TrEMBL
Match: A0A0P0LY91_LABPU (Glycine-rich protein OS=Lablab purpureus GN=GRP PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.2e-36 Identity = 77/100 (77.00%), Postives = 84/100 (84.00%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. TAIR10
Match: AT4G21620.1 (AT4G21620.1 glycine-rich protein) HSP 1 Score: 142.5 bits (358), Expect = 1.7e-34 Identity = 74/129 (57.36%), Postives = 94/129 (72.87%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. TAIR10
Match: AT1G61255.1 (AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)) HSP 1 Score: 91.7 bits (226), Expect = 3.5e-19 Identity = 62/140 (44.29%), Postives = 76/140 (54.29%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. NCBI nr
Match: gi|659078783|ref|XP_008439905.1| (PREDICTED: RNA-binding protein cabeza-like [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 9.6e-51 Identity = 106/133 (79.70%), Postives = 112/133 (84.21%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. NCBI nr
Match: gi|449433888|ref|XP_004134728.1| (PREDICTED: ctenidin-3-like [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 1.6e-50 Identity = 105/133 (78.95%), Postives = 112/133 (84.21%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. NCBI nr
Match: gi|1009108847|ref|XP_015887003.1| (PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 166.4 bits (420), Expect = 3.2e-38 Identity = 78/102 (76.47%), Postives = 87/102 (85.29%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. NCBI nr
Match: gi|802782727|ref|XP_012091528.1| (PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]) HSP 1 Score: 165.6 bits (418), Expect = 5.5e-38 Identity = 79/100 (79.00%), Postives = 83/100 (83.00%), Query Frame = 1
BLAST of Cp4.1LG10g09230 vs. NCBI nr
Match: gi|351721048|ref|NP_001235149.1| (uncharacterized protein LOC100499725 precursor [Glycine max]) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-36 Identity = 88/149 (59.06%), Postives = 99/149 (66.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |