CmoCh03G004990 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCCCTCCCTCCCAATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCCGGCGGCGGATTTGATGACATACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGATACGGCGGACCAAAAGGCAGTTACGGCAAGGGTGGAATCATAAGGAACACTGTGGTGTGTAAAGAAAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGCGCAAGGGATTCGGAGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCTCTGAGAAGTGTATTGGCTATTGTTAG ATGAATCCCTCCCTCCCAATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCCGGCGGCGGATTTGATGACATACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGATACGGCGGACCAAAAGGCAGTTACGGCAAGGGTGGAATCATAAGGAACACTGTGGTGTGTAAAGAAAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGCGCAAGGGATTCGGAGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCTCTGAGAAGTGTATTGGCTATTGTTAG ATGAATCCCTCCCTCCCAATTTCCGCTCTTCTCCTCGCCGTTCTCCTCCTCTCCCCCTCCGCCTCTCTCGCCGCCGGGATGTTCGAACCCGGCGGCGGATTTGATGACATACCCGGCTTTCGGAAAGGCTGGGACAAGGGGATCGTCGGTGGTGGCTACGGCGGTGGATACGGCGGACCAAAAGGCAGTTACGGCAAGGGTGGAATCATAAGGAACACTGTGGTGTGTAAAGAAAAAGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCCAAGTGCTTCTCCTCTTATAGCCGATCGCGCAAGGGATTCGGAGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCTCTGAGAAGTGTATTGGCTATTGTTAG
BLAST of CmoCh03G004990 vs. TrEMBL
Match: A0A0A0KHJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516980 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 6.7e-51 Identity = 103/133 (77.44%), Postives = 111/133 (83.46%), Query Frame = 1
BLAST of CmoCh03G004990 vs. TrEMBL
Match: A0A067JDR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21379 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 7.2e-37 Identity = 76/100 (76.00%), Postives = 81/100 (81.00%), Query Frame = 1
BLAST of CmoCh03G004990 vs. TrEMBL
Match: C6SVW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G244800 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 6.1e-36 Identity = 85/149 (57.05%), Postives = 97/149 (65.10%), Query Frame = 1
BLAST of CmoCh03G004990 vs. TrEMBL
Match: A0A0B2PLW1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014337 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.4e-35 Identity = 84/149 (56.38%), Postives = 97/149 (65.10%), Query Frame = 1
BLAST of CmoCh03G004990 vs. TrEMBL
Match: V7BT50_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G190300g PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 2.3e-35 Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 1
BLAST of CmoCh03G004990 vs. TAIR10
Match: AT4G21620.1 (AT4G21620.1 glycine-rich protein) HSP 1 Score: 140.6 bits (353), Expect = 6.6e-34 Identity = 66/96 (68.75%), Postives = 76/96 (79.17%), Query Frame = 1
BLAST of CmoCh03G004990 vs. TAIR10
Match: AT1G61255.1 (AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)) HSP 1 Score: 90.9 bits (224), Expect = 6.0e-19 Identity = 52/100 (52.00%), Postives = 61/100 (61.00%), Query Frame = 1
BLAST of CmoCh03G004990 vs. NCBI nr
Match: gi|659078783|ref|XP_008439905.1| (PREDICTED: RNA-binding protein cabeza-like [Cucumis melo]) HSP 1 Score: 208.8 bits (530), Expect = 5.6e-51 Identity = 104/133 (78.20%), Postives = 111/133 (83.46%), Query Frame = 1
BLAST of CmoCh03G004990 vs. NCBI nr
Match: gi|449433888|ref|XP_004134728.1| (PREDICTED: ctenidin-3-like [Cucumis sativus]) HSP 1 Score: 208.0 bits (528), Expect = 9.6e-51 Identity = 103/133 (77.44%), Postives = 111/133 (83.46%), Query Frame = 1
BLAST of CmoCh03G004990 vs. NCBI nr
Match: gi|1009108847|ref|XP_015887003.1| (PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 162.5 bits (410), Expect = 4.6e-37 Identity = 75/102 (73.53%), Postives = 85/102 (83.33%), Query Frame = 1
BLAST of CmoCh03G004990 vs. NCBI nr
Match: gi|802782727|ref|XP_012091528.1| (PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-36 Identity = 76/100 (76.00%), Postives = 81/100 (81.00%), Query Frame = 1
BLAST of CmoCh03G004990 vs. NCBI nr
Match: gi|351721048|ref|NP_001235149.1| (uncharacterized protein LOC100499725 precursor [Glycine max]) HSP 1 Score: 158.3 bits (399), Expect = 8.7e-36 Identity = 85/149 (57.05%), Postives = 97/149 (65.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |