Cp4.1LG10g03270 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCAACAACCCTTACATCGTTGCATTTTTCATCCAAATCACCTACGCCGGTATGAGCCTCATGTCCAAGGCCGCCTTCGCCTCCGGTATGAACACGTATATCTTCCTATTTTATCGTCAAGCTGCTGGTACTCTTGTTTTGGTCCCGCTTACTCTACTCTTAAAAGGGTACGTTTCGTTTTCATTGTTTTTTTATTTCGATTTGTCAATATGAACATAGCTCAACTCATTTTATTGCAAATATGTTTCAGGAAGGAGAAGAGACCGTTGTCTTTGAAGCATTTGTGCCAGATTTTCGTCATTTCATTGATAGGGTGTGTATTAATGTTTATCATTAATGTCCCAAACGTTAGGAATTAGAATTATCCACAGTGGTATGATATTGTCCACTTTGAGCCTAAGCTCTCTCATGGAGATGTTGTATTCCCTACTTATCAACCCGTAATCATTCCCTTAATTAAGGACTCCCTCCCATTCTCCCCTCGAACAAAGTACACCATAGAGCCTCTCTTGAGGCCTATGGAGCCCTCGAACAGCCTCTCCTTAACTGAGGCTTGACTCCTTTCTCTGGAGATCTCGAACAAAGTACACATTTTGTTTGATACTTAAGTCACTCTTGACTATACTTTCGAGGGTCCCAACTTCTTTGTTCGACATTTAAGGATTCTATTTAAGAATTTACAACTCTCCAATGTAGGACTCACTCCCAACGATCCTCAACACACTAATGTATATCAACTTTTTATTTTATTCAACGAATCTTATTATAGTCTCAATTATGAATTGGGTTTAGGATCACTCTAGCATTGGATGCATATGGAGTAGCGATTAACTATACGTCTGCAACATTGGGCGCCGCAGCTTTCAATTGCGTTCCTGTCACCACATTCTTCTTCGCACTCATACTAAGAATGGAGAAGGTGAAGCTAAATAAAGCAGCCGGGATAGCAAAGGTGGTGGGCATAATGATATGCATGGCGGGCGCCGCCATTCTAGCTTTCTACAAAGGCCCTTATTTGAGCCCAATTTTGAGCCACCACCAACTATTCCACCACGTCCAAACCCAAACCCACCACCCTCCCACCTCCCAAAACACATGGATGATCGGCTGCTTCTTCCTCCTCGTCACCAGCGTCTCTTGGGGGATCTGGTTCGTTCTCCAGGCTCGATTCTTGAAGGAGTACCCGCACCCGATGGAGTTCATGTGCGCGCAGACCGTGATGAGCACGGCTCAGACCTTCTTCGTAGCCATCGCCATGGAAAGAGACCCTTTGGAGTGGAAATTGGGCTGGAATGTTCGACTCTACGCTGTGCTGTATTGTGTAAGCTCAATCAAATCATGACTTGTTGTTGGGCTTACCAAAAATGTAATCTTTACTTATAAATCCATCATCATTTCCTAAATTAAATTAACATCTGGCACAGGGCGTTCTGGTTATTGGCGTTGCAAATAATGCGCAATGTTGGGTCATCCGAGAGAAGGGTCCAGTTTTTCAAGCCATGACGACGCCGTTGAACTTAATGGCTACAATAATTGGTTCCCTATTGCTACTTTCCGAAGGAATTTACGTGGGAAGGTAATAAATTACGGTAATTTAAGCAGTAAATTTTTGTGTTAAAAGTTACTGAATTTAGTGTTGTTGTTGTTGGGATGACAGTATAATTGGAGCATCGTTGCTGGTAATGAGTCTTTACAGTGTTTTGTGGGGTAAAAGCAAGGAGCTTGTCACTGCTCCAAACGACCAACAACCGTCTCCACCACTAAAACAGGCTGATGAGCCGACATGTCGGTCTGAAGTCAACTCCACGTTAGTCTAAGCAAAAGCTGTGATGAACTTGTTCGTGATATTTAATTTCTTCTCTAAAATTGTATTTTGGTTACTAAATGCAATACAATTCTCCTAT ATGGCTTTCAACAACCCTTACATCGTTGCATTTTTCATCCAAATCACCTACGCCGGTATGAGCCTCATGTCCAAGGCCGCCTTCGCCTCCGGTATGAACACGTATATCTTCCTATTTTATCGTCAAGCTGCTGGTACTCTTGTTTTGGGCGTTCTGGTTATTGGCGTTGCAAATAATGCGCAATGTTGGGTCATCCGAGAGAAGGGTCCAGTTTTTCAAGCCATGACGACGCCGTTGAACTTAATGGCTACAATAATTGGTTCCCTATTGCTACTTTCCGAAGGAATTTACGTGGGAAGTATAATTGGAGCATCGTTGCTGGTAATGAGTCTTTACAGTGTTTTGTGGGGTAAAAGCAAGGAGCTTGTCACTGCTCCAAACGACCAACAACCGTCTCCACCACTAAAACAGGCTGATGAGCCGACATGTCGGTCTGAAGTCAACTCCACGTTAGTCTAAGCAAAAGCTGTGATGAACTTGTTCGTGATATTTAATTTCTTCTCTAAAATTGTATTTTGGTTACTAAATGCAATACAATTCTCCTAT ATGGCTTTCAACAACCCTTACATCGTTGCATTTTTCATCCAAATCACCTACGCCGGTATGAGCCTCATGTCCAAGGCCGCCTTCGCCTCCGGTATGAACACGTATATCTTCCTATTTTATCGTCAAGCTGCTGGTACTCTTGTTTTGGGCGTTCTGGTTATTGGCGTTGCAAATAATGCGCAATGTTGGGTCATCCGAGAGAAGGGTCCAGTTTTTCAAGCCATGACGACGCCGTTGAACTTAATGGCTACAATAATTGGTTCCCTATTGCTACTTTCCGAAGGAATTTACGTGGGAAGTATAATTGGAGCATCGTTGCTGGTAATGAGTCTTTACAGTGTTTTGTGGGGTAAAAGCAAGGAGCTTGTCACTGCTCCAAACGACCAACAACCGTCTCCACCACTAAAACAGGCTGATGAGCCGACATGTCGGTCTGAAGTCAACTCCACGTTAGTCTAA MAFNNPYIVAFFIQITYAGMSLMSKAAFASGMNTYIFLFYRQAAGTLVLGVLVIGVANNAQCWVIREKGPVFQAMTTPLNLMATIIGSLLLLSEGIYVGSIIGASLLVMSLYSVLWGKSKELVTAPNDQQPSPPLKQADEPTCRSEVNSTLV
BLAST of Cp4.1LG10g03270 vs. Swiss-Prot
Match: WTR45_ARATH (WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. Swiss-Prot
Match: WTR7_ARATH (WAT1-related protein At1g43650 OS=Arabidopsis thaliana GN=At1g43650 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.3e-11 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. Swiss-Prot
Match: WTR32_ARATH (WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.9e-10 Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. Swiss-Prot
Match: WTR8_ARATH (WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.7e-10 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. Swiss-Prot
Match: WTR18_ARATH (WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.7e-10 Identity = 26/75 (34.67%), Postives = 48/75 (64.00%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TrEMBL
Match: A0A0A0KFA3_CUCSA (WAT1-related protein OS=Cucumis sativus GN=Csa_6G485160 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.2e-33 Identity = 79/106 (74.53%), Postives = 87/106 (82.08%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TrEMBL
Match: A0A0A0KJ33_CUCSA (WAT1-related protein OS=Cucumis sativus GN=Csa_6G485670 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TrEMBL
Match: A0A0A0KKW0_CUCSA (WAT1-related protein OS=Cucumis sativus GN=Csa_6G485170 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26 Identity = 70/108 (64.81%), Postives = 86/108 (79.63%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TrEMBL
Match: A0A0A0KHV4_CUCSA (WAT1-related protein OS=Cucumis sativus GN=Csa_6G485150 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 7.9e-22 Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TrEMBL
Match: A0A0A0KHU9_CUCSA (WAT1-related protein OS=Cucumis sativus GN=Csa_6G485110 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 7.7e-17 Identity = 49/78 (62.82%), Postives = 59/78 (75.64%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TAIR10
Match: AT5G64700.1 (AT5G64700.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TAIR10
Match: AT1G43650.1 (AT1G43650.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 68.9 bits (167), Expect = 3.0e-12 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TAIR10
Match: AT4G08300.1 (AT4G08300.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11 Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TAIR10
Match: AT1G44800.1 (AT1G44800.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. TAIR10
Match: AT3G28050.1 (AT3G28050.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 26/75 (34.67%), Postives = 48/75 (64.00%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. NCBI nr
Match: gi|778717890|ref|XP_011657776.1| (PREDICTED: WAT1-related protein At5g64700-like isoform X2 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33 Identity = 79/106 (74.53%), Postives = 87/106 (82.08%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. NCBI nr
Match: gi|778717886|ref|XP_011657775.1| (PREDICTED: WAT1-related protein At5g64700-like isoform X1 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33 Identity = 79/106 (74.53%), Postives = 87/106 (82.08%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. NCBI nr
Match: gi|659081074|ref|XP_008441136.1| (PREDICTED: WAT1-related protein At5g64700-like [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33 Identity = 79/106 (74.53%), Postives = 87/106 (82.08%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. NCBI nr
Match: gi|659080822|ref|XP_008440998.1| (PREDICTED: WAT1-related protein At5g64700-like [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 2.1e-31 Identity = 78/111 (70.27%), Postives = 90/111 (81.08%), Query Frame = 1
BLAST of Cp4.1LG10g03270 vs. NCBI nr
Match: gi|449448590|ref|XP_004142049.1| (PREDICTED: WAT1-related protein At5g64700-like [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30 Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |