Cp4.1LG10g02430 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAGGAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAGAAAAAACAGAGGCGATGGGAGTTCCCGCTCTATTCCGCACTCGTCAGAGCGCCACGCGACCTCACGAGGAAGTGGTCGAGCCTGGTATCTAGCTGCTTCTCTGGCTATCTCTGAGTGTTCAAGAATGGTAAACTCCTCCAAGGACGACACAGCCACCAACGGCGACATGTCCATCGGCGATTCTCCGCCCTCAAATTCCAGCCTCTACTCCGAAGGCGAGAAGGTACTTGCATATCATGGCCCGCGCATCTATGAAGCCAAGGTACTTTTCCTTCTACGCCATTTTTTTTATTTTTTATTATGGTATTCGACTTTCAATTCCTCTTTCTTGTTCCTTAAAACTTCCCTTAAGCATCGAGCTGTCAGCTCGTTTTTCGGTTGGCGCAGCTGATTTTTGGAGGAAAATTAAGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGATTATTTTTGTACCCTAATTCAATCGCGTCAGTTGTTTCCTTCGCGTGTGGCTATTGGATTTTTTTCGCTTGTTTTGTCGGTTTTATGACCGGAGAAAGAGAATACCGTACGAAGGTTCAATTAGCTGAGGTCAGTGTTACGGGGACACGAGAGCTTTGGAAATGACCAAGTTTCCTACATTATCAAAGAAGAAAAGGATTTGGACCACGTATAGACGAAGGAAAAACGCACAGAATTTGAGTCATTGGAGAGAACACATTTCAAATTTAAAGATTGAACAACGAATTCCAACAATTCTTGGCAAAAGCGCAGTGAAAAAAGAGATGAGTCATGGATTCAGCTACTTCGAAACATAATTGACAATAGAAGGCTGCAAAGCTGAAGATGACATCTCCTTTTGGAGAGAATATAATCTATTATGCCGCTGTTTAGCATGATCCACTGAAGAATATTTGCTCTTTTGGGACTATTAGAAGAGTTTGTAAGCTTCTTATTGAGACAGTTGGCTGAAAATAATCCCGAAGAATCAAAAGATCATCTACTTGAATCATCAAATTCAACCAAATTAACCGAATCCAAGTTCTCCAACAGAGAACTCAAGTCAACAATCTTCTTATCCTTCAAGTTTCTTCTAAAAGAATCTTCCAAGATAAACAAGAAGAATCCCATGAATCTGATATAACTCCATTTAGGAGTGTTGAGATCTTGAAAAGAATAGGATATCAAACTTTAAAATGCTAAAGATCAAACCATATATCTGGAGATGTTCATAGAGTTGGTTGGCTAGGCACATGAGATATAGGTTGTTGGGAGATGATCAAGGAGTCTCTTCACCATTCTCTCCTTTCATGAGAAAGGAAGCTTTTTATGGTAAGTCAGGGCATGTGCCGTTTTTTGGGGTTTGTGGATGGAGAGGAATAATAGAATATGATATTTGGTCCCTTTTTAAATTTCATGTTTCTTTGTGGGCTTTGGTGGTCAAACCTTTTTGTAATTATCCGTTAGAATATGATATTTGTACATTTAACTTCATCATCTGAAGCAGTATAATTTTCATGAATCGATGGTAAGAGAGCAAGATCGAAAAAAATGGAGGAATTATTTACCTCAACATCATAATCAGTTAGATAATTAGGTATCATAAGCTTCAGCTACCTCATTTTCGTCTTGCTTAATGTGTTCCGTTGAGGGCGAGATATTACTTCTCCTCTGATTGGATGCAACATCTCCAGGAAATTGTGCAATATTAGTTGTACTTCTACTAACATTCTTCTTTATTTTTGAATCCATACATGTTGTCTTTTCTTGTGAGTGTCATAACCAACAAAACTATTATGCCTAGTCTTTGGATTCAACTTGTGAACCTTATTAAAGGAGACCCTAGAGTTGCTAGCAAAAATTGTGAGTTTTCTTGCGATTGGAATGTATTCCTTGTTTGGTAGGCAGACCCCCTATGCACAACAACATACCCCTACGCATAACAACGTGGTAACACCAATTTCCTAAAATCTCTGAAGTAACTCAACATGCATCTTAATTGAACAAAGAGCATAAAACAACTATCGCATAAAACTAAAAAACTACGTCTTATTTCTACAAAACAAAAGGCAACAAGTTGCATCAACTTGGTTCTTCACTAGGATCCCCATTTTGTGTCATCTCACATGAAAAGGAAATCGATGCCATATTATTCCTTATCCACAGTGATCAAACAAGTAGCTATCCAGTTTATGCCCTTACATTTCAGGTTCAAAAAGTTGAGCTTAGGAAGAAGGAATGGAGATACTTTCTGCACTATCTAGTAAGTTTCACTTCCTTGTCTTGCAATTTTCCTTGCCTCCCTTCTTCTGATTTTGAGTGA CAAGGAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAGAAAAAACAGAGGCGATGGGAGTTCCCGCTCTATTCCGCACTCGTCAGAGCGCCACGCGACCTCACGAGGAAGTGGTCGAGCCTGGTATCTAGCTGCTTCTCTGGCTATCTCTGAGTGTTCAAGAATGGTAAACTCCTCCAAGGACGACACAGCCACCAACGGCGACATGTCCATCGGCGATTCTCCGCCCTCAAATTCCAGCCTCTACTCCGAAGGCGAGAAGGTACTTGCATATCATGGCCCGCGCATCTATGAAGCCAAGGTTCAAAAAGTTGAGCTTAGGAAGAAGGAATGGAGATACTTTCTGCACTATCTAGTAAGTTTCACTTCCTTGTCTTGCAATTTTCCTTGCCTCCCTTCTTCTGATTTTGAGTGA ATGGTAAACTCCTCCAAGGACGACACAGCCACCAACGGCGACATGTCCATCGGCGATTCTCCGCCCTCAAATTCCAGCCTCTACTCCGAAGGCGAGAAGGTACTTGCATATCATGGCCCGCGCATCTATGAAGCCAAGGTTCAAAAAGTTGAGCTTAGGAAGAAGGAATGGAGATACTTTCTGCACTATCTAGTAAGTTTCACTTCCTTGTCTTGCAATTTTCCTTGCCTCCCTTCTTCTGATTTTGAGTGA MVNSSKDDTATNGDMSIGDSPPSNSSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEWRYFLHYLVSFTSLSCNFPCLPSSDFE
BLAST of Cp4.1LG10g02430 vs. Swiss-Prot
Match: MRG1_ARATH (Protein MRG1 OS=Arabidopsis thaliana GN=MRG1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.1e-18 Identity = 44/65 (67.69%), Postives = 56/65 (86.15%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. Swiss-Prot
Match: MRG2_ARATH (Protein MRG2 OS=Arabidopsis thaliana GN=MRG2 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 7.4e-07 Identity = 30/64 (46.88%), Postives = 37/64 (57.81%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. TrEMBL
Match: A0A0A0KGE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G491700 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 2.8e-21 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. TrEMBL
Match: A0A0D2SEM2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G055700 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.2e-21 Identity = 50/64 (78.12%), Postives = 60/64 (93.75%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. TrEMBL
Match: A0A0D2S7H0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G055700 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.2e-21 Identity = 50/64 (78.12%), Postives = 60/64 (93.75%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. TrEMBL
Match: A0A0D2T9E8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G055700 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.2e-21 Identity = 50/64 (78.12%), Postives = 60/64 (93.75%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. TrEMBL
Match: A0A061DHA5_THECC (MRG family protein isoform 2 OS=Theobroma cacao GN=TCM_000700 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-20 Identity = 50/66 (75.76%), Postives = 61/66 (92.42%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. TAIR10
Match: AT4G37280.1 (AT4G37280.1 MRG family protein) HSP 1 Score: 90.9 bits (224), Expect = 4.0e-19 Identity = 44/65 (67.69%), Postives = 56/65 (86.15%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. TAIR10
Match: AT1G02740.1 (AT1G02740.1 MRG family protein) HSP 1 Score: 54.3 bits (129), Expect = 4.2e-08 Identity = 30/64 (46.88%), Postives = 37/64 (57.81%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. NCBI nr
Match: gi|659079569|ref|XP_008440326.1| (PREDICTED: mortality factor 4-like protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 124.4 bits (311), Expect = 9.3e-26 Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. NCBI nr
Match: gi|659079567|ref|XP_008440325.1| (PREDICTED: mortality factor 4-like protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 124.4 bits (311), Expect = 9.3e-26 Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. NCBI nr
Match: gi|449448286|ref|XP_004141897.1| (PREDICTED: mortality factor 4-like protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 119.4 bits (298), Expect = 3.0e-24 Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. NCBI nr
Match: gi|778718507|ref|XP_011657879.1| (PREDICTED: mortality factor 4-like protein 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 119.4 bits (298), Expect = 3.0e-24 Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 1
BLAST of Cp4.1LG10g02430 vs. NCBI nr
Match: gi|645220104|ref|XP_008238734.1| (PREDICTED: LOW QUALITY PROTEIN: nuA4 complex subunit EAF3 homolog [Prunus mume]) HSP 1 Score: 111.7 bits (278), Expect = 6.2e-22 Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |