Cp4.1LG09g09820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g09820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger CCCH domain-containing protein 43
LocationCp4.1LG09 : 8741032 .. 8744959 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCCACGAATCGTCTAGAAAAAAGGAAAAGAACAAAAAAAAATTGAAGATTGTTAGAGAGAGGCGAAGCGCAAACGGCCGCAGTCAGAAAGTGACCTTTTCCTGTTCTTAGTTCCCACTTAGTGTCAATACCCATTTCTCCATGTACTTTATTATTCTCTATAGCAGCTAGGGTTTTCTTGGGTTCAAATGTGACGCAGAATGGAACCTTCTGAAGCTGTTTCCGTCCTTATTCACTGTGAATCATTGCCTTCTGGGTCTCAATCTCTACAGTTTCATGGCTCTGTTCATGATCCTGCACTATTTGATGCATCGCATGTGGCCGATGATGATCGCATCCATGCAGAGCTTCAGAAATTGGATTTGAAGGATGAGAAAGAGGCGGCGGTGAAGGATTTTGACGGCGGCGGAGAATGGGAAGTTGAGAAGAATCCTGTTGAAGGTGAGGGAAATTTGGAGGAGGAAGAGGAGGAGGAGATGGTGGTGGATGCAGGCGACGGCGGTGAGGTGGAGAAGGATGGGGAAATGAGGGGTGGAAACAACCGGTACCCTGTACGGTCAGAGGCTGAGGATTGTGCCTTTTACCTTAGGACTGGCACTTGCAAGTTTGGATCATTGTGTAAATTCAATCATCCACTGCGAAAGAGACATCAGGTGCGGTTCTGCAGATCTTATTTACTTGTGGAAGCTAATACCTCTGTTTTAATGCTTTGTTCTTTGTATTGGTTTGTTGATTGTTAAACCTCCTTTTCCAGTGCTATCTTCTGTTGATAGGTTTTAGTACTGTTCTCTTTGCATGTATAGCTTTTGTTATCATTGCATCAATTGGAGAGGGAAACGAAGCATTACTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTGAAACTGTGAGGCTGACGGCGATACGTAGCGGGTTAAAGCGGACAATATCTACTAGCGGTGGGCTTGGACGGTTACAAATGGTATCAAAGCTGATCACTGGGTGGTATGTCAGTGAGGACGGGCCCCAAGGGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGAGAACGAAGCAGGTTGTGGAAACCTTTCCCTAGTAGTAGACGCGTTTTAGAACTGTGAGGTTGATGGCGATGTGTAATGGGCCGAAGAGGACAATATCTGTTAGCGGTGGGCTTGGGCTCTCCCTAGTAGACGCTGGCCCCTAAGGGGGTGGGTTGTGAGATCCCACATTGGTTGGAGATGGGAACGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTGAAACTGTGAGGCTGACGGCGATACGTAGCGGGTTAAAGCGGACAATATCTACTAATGGTGGGCTTGGACGGTTACAATAGTATCGGAGCCGATCACCGGGTGGTGTGTCAGTGAGGACGTTGGGACCCCAAAGGGGTGGATTGTGAGATCCCATGTCGGTTGGAGAGGAGAACGAAGCAAGTTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAGAACCGTGAGGTTGACGGCAATGTGTAATGGGCCGAAGAAGACAATATCTGTGTTAGCAATGGGCTTGGTCTCTCCCTGGTAGACGCGGGCCCCTAAGGGGGTGGATTGTGAGAACCCACATTAGTTGGAGATGGGAACGAAGCATTCCTTGTAAGAGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACCGTGAGGTTGATAGCGATAAGTAACGGGCCAAAACGGACAATATCTACTCGCGGTTGGCTTCGGCTGTTACAAATGGTATCAGAGCCAATCATCGGGTGGTGTGCGAGCGAGGACGCAGGCCCCCAAGAGGGATGGATTGTGAGATCCCACATTAGTTGGAAAGGGCAACGAAGCATTTTCTTATAAAGATGTGGAAACCTCCTCCTAGCAGACGCATTTTAAAATCGTGAAAACGAGCCAAAACGGACAATATCTACTTGCAGGGCTTGGACTTGGGCTGTTACAAAGCTGAGATTTGCCGGTTTCCAATTCATCGGCATTTACCTGTTTATTTTAAGTTTGTTCCAGGCTCTTCTTCTCAGCTTCTTCAGTCCTAATTGTTCTATTGAAACTTCTAACATGATCAATGGATAACATTTATTCTTGATGGGTTTCATTTTTGTTCAATTTGAAAGGTTGTTTCTGAGAAATTGAAGCACGAGAACGATTCGGCCGAGCAGACGAGCAAGACCGAATGCAAGGTTTCCATTGTTGTTATGTTTTCATCAACAAATTTCAAGTATTTTGCTTAGTTAAATGGTTTGATGCATACCCCTGTTCTGAACTTTTCTTATATTCCTTTATAAGAACATAATCGACGTTTCCTTGGATTATTATAAGTTCCCGCGTTTATATGACCGATTTATTTGCGAATTCTGTACGAGATAGTGAATTATTCATTTTCCTTTATGATATGTGTGATCTACTGATATCGATTAACTGTTACACTTCACGAGCCATTCGCAGTATTACTCGAGGACCGGGGGTTGTAAATTCGGAACAGCCTGTAGATATAACCATACGAGACCGAGAGCATTGCCAAACCCAATTCTCGAGCTTAACTTCCTTGGTTTGCCAATCCGACTAGTTTAGTTCGTAACTTTGACATCTTTCTAGACTGGATCCCTTATCTCACTTATCTTGAAGAATTTAATGATCTTTTTATTGACAGAACGAAAAAGAATGTCCCTATTACATGCGCACGGGATGCTGCAAATATGGAGCGAATTGCAAGTTTAATCATCCCGATCCTACTACCGTTGCTGTACCGGAATCGCTGTCGGGATATAACAATGGAGTGTTGCTACAAGGTGGTGCATCACAATCACAGATCACATCCTGGACTTCACCAAGAGTGCTGAATGAAACACCAACATTTGTACCTGCTATGATTTCACCTTCTCAAGATTCAGAATGGAACGCATACCAGGTATCGTATTACGTTCATCTCGGATGGTCTGGTTTAAAGGATATCGGTATCGTATTGACTTTATCTGTGGTTTGTTCATGTTAAGGCTCCCATGTATCCATCAGAAATCAGCATGCTTCCACCCCCAACGTACGCCGTGAACAATATAGCATCTGAGACGGATCTTTATCCTTCTCATCAGCAAGTAGAAGAACATCCCGAACGACCTGGTCAACCCGAATGCAGCTACTTTCTAAAGACTGGGGATTGTAAATTTAAATCTCTTTGCATATATCACCACCCGAAAAATTGGAACCTGAAGTTACCGACCTGCACGCTCAATGACAAAGGCCTGCCTTTGAGACCTGTAAGCTTGTCCTTCTCATTTCCTAGTTATTTATATAGGACTTTTCTGTAGAAAATACCTCAAGGATAAATTTTTATGTGACATTCAGGATCAGAACGTATGCACGTATTACAGTCGCTACGGCATCTGTAAGTTCGGGCCATCGTGCAAGTTCGACCATCCTATTCTTCCAGCTTCTTCAACGAGCGAGCTTAAACAGCAGCCTCACTACAGCAACTTTAATGCTGCAGAAGGGGCTGAAATGGGCGGAGGGAGTGGAAATGGCGTCACAGTTGAGCAGTCTGCATAAGAATTTTGTGCAGAGGCCCTCTAAAGGAACTTTCATGGAGGATTTGTTTGTTAAGAGGATATAAGGATGCATTCAACTCGTTTACCATCGGGTTCTGCCATAAGCTTTTCAAATGATGGCACTTATTTTCTAGCTGAACAAAGAAAGAAATGTAAATTATACCTAAGTTTCTACACAATGGCTATAATCTTGTAGCTATAAGATACAATCTTTTATCCAGACATTTCACAGAGCACAGAAGGATCAATGAGTTTTTGCTTCTAGTTGGCTGTTAAGAAGAATTACAAACTATTTCATTCAAAGCCTCCTTTTTCATCCAAGTCTCTGTTAGAACTGGCAACCT

mRNA sequence

ACCCCACGAATCGTCTAGAAAAAAGGAAAAGAACAAAAAAAAATTGAAGATTGTTAGAGAGAGGCGAAGCGCAAACGGCCGCAGTCAGAAAGTGACCTTTTCCTGTTCTTAGTTCCCACTTAGTGTCAATACCCATTTCTCCATGTACTTTATTATTCTCTATAGCAGCTAGGGTTTTCTTGGGTTCAAATGTGACGCAGAATGGAACCTTCTGAAGCTGTTTCCGTCCTTATTCACTGTGAATCATTGCCTTCTGGGTCTCAATCTCTACAGTTTCATGGCTCTGTTCATGATCCTGCACTATTTGATGCATCGCATGTGGCCGATGATGATCGCATCCATGCAGAGCTTCAGAAATTGGATTTGAAGGATGAGAAAGAGGCGGCGGTGAAGGATTTTGACGGCGGCGGAGAATGGGAAGTTGAGAAGAATCCTGTTGAAGGTGAGGGAAATTTGGAGGAGGAAGAGGAGGAGGAGATGGTGGTGGATGCAGGCGACGGCGGTGAGGTGGAGAAGGATGGGGAAATGAGGGGTGGAAACAACCGGTACCCTGTACGGTCAGAGGCTGAGGATTGTGCCTTTTACCTTAGGACTGGCACTTGCAAGTTTGGATCATTGTGTAAATTCAATCATCCACTGCGAAAGAGACATCAGGTTGTTTCTGAGAAATTGAAGCACGAGAACGATTCGGCCGAGCAGACGAGCAAGACCGAATGCAAGAACGAAAAAGAATGTCCCTATTACATGCGCACGGGATGCTGCAAATATGGAGCGAATTGCAAGTTTAATCATCCCGATCCTACTACCGTTGCTGTACCGGAATCGCTGTCGGGATATAACAATGGAGTGTTGCTACAAGGTGGTGCATCACAATCACAGATCACATCCTGGACTTCACCAAGAGTGCTGAATGAAACACCAACATTTGTACCTGCTATGATTTCACCTTCTCAAGATTCAGAATGGAACGCATACCAGGCTCCCATGTATCCATCAGAAATCAGCATGCTTCCACCCCCAACGTACGCCGTGAACAATATAGCATCTGAGACGGATCTTTATCCTTCTCATCAGCAAGTAGAAGAACATCCCGAACGACCTGGTCAACCCGAATGCAGCTACTTTCTAAAGACTGGGGATTGTAAATTTAAATCTCTTTGCATATATCACCACCCGAAAAATTGGAACCTGAAGTTACCGACCTGCACGCTCAATGACAAAGGCCTGCCTTTGAGACCTGATCAGAACGTATGCACGTATTACAGTCGCTACGGCATCTGTAAGTTCGGGCCATCGTGCAAGTTCGACCATCCTATTCTTCCAGCTTCTTCAACGAGCGAGCTTAAACAGCAGCCTCACTACAGCAACTTTAATGCTGCAGAAGGGGCTGAAATGGGCGGAGGGAGTGGAAATGGCGTCACAGTTGAGCAGTCTGCATAAGAATTTTGTGCAGAGGCCCTCTAAAGGAACTTTCATGGAGGATTTGTTTGTTAAGAGGATATAAGGATGCATTCAACTCGTTTACCATCGGGTTCTGCCATAAGCTTTTCAAATGATGGCACTTATTTTCTAGCTGAACAAAGAAAGAAATGTAAATTATACCTAAGTTTCTACACAATGGCTATAATCTTGTAGCTATAAGATACAATCTTTTATCCAGACATTTCACAGAGCACAGAAGGATCAATGAGTTTTTGCTTCTAGTTGGCTGTTAAGAAGAATTACAAACTATTTCATTCAAAGCCTCCTTTTTCATCCAAGTCTCTGTTAGAACTGGCAACCT

Coding sequence (CDS)

ATGGAACCTTCTGAAGCTGTTTCCGTCCTTATTCACTGTGAATCATTGCCTTCTGGGTCTCAATCTCTACAGTTTCATGGCTCTGTTCATGATCCTGCACTATTTGATGCATCGCATGTGGCCGATGATGATCGCATCCATGCAGAGCTTCAGAAATTGGATTTGAAGGATGAGAAAGAGGCGGCGGTGAAGGATTTTGACGGCGGCGGAGAATGGGAAGTTGAGAAGAATCCTGTTGAAGGTGAGGGAAATTTGGAGGAGGAAGAGGAGGAGGAGATGGTGGTGGATGCAGGCGACGGCGGTGAGGTGGAGAAGGATGGGGAAATGAGGGGTGGAAACAACCGGTACCCTGTACGGTCAGAGGCTGAGGATTGTGCCTTTTACCTTAGGACTGGCACTTGCAAGTTTGGATCATTGTGTAAATTCAATCATCCACTGCGAAAGAGACATCAGGTTGTTTCTGAGAAATTGAAGCACGAGAACGATTCGGCCGAGCAGACGAGCAAGACCGAATGCAAGAACGAAAAAGAATGTCCCTATTACATGCGCACGGGATGCTGCAAATATGGAGCGAATTGCAAGTTTAATCATCCCGATCCTACTACCGTTGCTGTACCGGAATCGCTGTCGGGATATAACAATGGAGTGTTGCTACAAGGTGGTGCATCACAATCACAGATCACATCCTGGACTTCACCAAGAGTGCTGAATGAAACACCAACATTTGTACCTGCTATGATTTCACCTTCTCAAGATTCAGAATGGAACGCATACCAGGCTCCCATGTATCCATCAGAAATCAGCATGCTTCCACCCCCAACGTACGCCGTGAACAATATAGCATCTGAGACGGATCTTTATCCTTCTCATCAGCAAGTAGAAGAACATCCCGAACGACCTGGTCAACCCGAATGCAGCTACTTTCTAAAGACTGGGGATTGTAAATTTAAATCTCTTTGCATATATCACCACCCGAAAAATTGGAACCTGAAGTTACCGACCTGCACGCTCAATGACAAAGGCCTGCCTTTGAGACCTGATCAGAACGTATGCACGTATTACAGTCGCTACGGCATCTGTAAGTTCGGGCCATCGTGCAAGTTCGACCATCCTATTCTTCCAGCTTCTTCAACGAGCGAGCTTAAACAGCAGCCTCACTACAGCAACTTTAATGCTGCAGAAGGGGCTGAAATGGGCGGAGGGAGTGGAAATGGCGTCACAGTTGAGCAGTCTGCATAA

Protein sequence

MEPSEAVSVLIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKEAAVKDFDGGGEWEVEKNPVEGEGNLEEEEEEEMVVDAGDGGEVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNETPTFVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPILPASSTSELKQQPHYSNFNAAEGAEMGGGSGNGVTVEQSA
Homology
[Close]
BLAST of Cp4.1LG09g09820 vs. Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.6e-73
Identity = 144/291 (49.48%), Postives = 175/291 (60.14%), Query Frame = 1 

Query: 124 DCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKNEKECPYYMR 183
           DC +Y RTG CK+G  C+FNH + K     + +L                 E ECPYYMR
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRP-------GEVECPYYMR 222

Query: 184 TGCCKYGANCKFNHPDPTTVAVPESLS-----GYNNGVLLQGGASQSQITSWTSPRVLNE 243
            G CKYGA CKFNHPDPTT+   +S S     G + G        Q+  TSW+SPR +N 
Sbjct: 223 NGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNG 282

Query: 244 TPTFVPAMISP-----SQDSEWNAYQAPMYPSEISMLPPPT-YAVNNIASETDL----YP 303
           T  F+P M+S      SQ+ EWN YQA +Y SE  +  P T Y +NN ++ET +    Y 
Sbjct: 283 TSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYR 342

Query: 304 SHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQ 363
                EE PERP QPECSY++KTGDCKFK  C YHHPKN   KLP   LNDKGLPLRPDQ
Sbjct: 343 HQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQ 402

Query: 364 NVCTYYSRYGICKFGPSCKFDHPILPASSTSE---LKQQPHYS-NFNAAEG 396
           N+CTYYSRYGICKFGP+C+FDH + P  ST     + + P  S N N ++G
Sbjct: 403 NICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPPQVSANGNESDG 446

[Close]
BLAST of Cp4.1LG09g09820 vs. Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 256.5 bits (654), Expect = 4.9e-67
Identity = 167/412 (40.53%), Postives = 219/412 (53.16%), Query Frame = 1 

Query: 17  PSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDE-KEAAVKDFDGGGEWEVE 76
           PS S S +   +V D A  D +HV+++  +  +L+ + L D  KE +V      G  E +
Sbjct: 17  PSRSSSDEVTVTVADRAPSDLNHVSEE--LSDQLRNVGLDDSAKELSVPISVPQGNVETD 76

Query: 77  KNPVEGEGNLEEEEEEE---MVV-----DAGDGGEVEKDGEMRGGNN---RYPVRSEAE- 136
              + G    EEEE  E   M+V     D+ D     + G  + G++    +PVR + + 
Sbjct: 77  SRALFGSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQI 136

Query: 137 ------------------DCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAE 196
                             +C +Y RTG CK+G  C+F+H            +K  N  A 
Sbjct: 137 GRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSH------------MKEHNSPAS 196

Query: 197 QTSKTEC-----KNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPES--LSGYNNGVLL 256
                         EKECP+YMR G CK+G++CKFNHPDPT +   +S    G N G   
Sbjct: 197 VPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFS 256

Query: 257 QGGASQSQITSWTSPRVLNETPT--FVPAMISPS-----QDSEWNAYQAPM-YPSEISML 316
               SQ+  TSW+S R +N T T  F+P+M   S     Q S+WN YQA   YP E S L
Sbjct: 257 PKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPL 316

Query: 317 PPPTYAVNNIASETDLYPSHQQ---VEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKN 376
            P +Y VNN  +ET  +  +Q    VEE PERP QPEC+Y+LKTGDCKFK  C YHHPKN
Sbjct: 317 APSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKN 376

Query: 377 WNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPILPASSTS 380
              K    + NDKGLPLRPDQ++CT+YSRYGICKFGP+C+FDH I P  S S
Sbjct: 377 RLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIPPTFSPS 414

[Close]
BLAST of Cp4.1LG09g09820 vs. Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.2e-54
Identity = 112/273 (41.03%), Postives = 148/273 (54.21%), Query Frame = 1 

Query: 120 SEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKNEKECP 179
           S  E+C +Y   G CKFG  CK+ H   K  +  +EK+                 EKECP
Sbjct: 238 SSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKV-----DLNFLGLPLRPGEKECP 297

Query: 180 YYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVL----LQGGASQSQITSWTSPRV 239
           YYMRTG CKY  NCKF+HPDP+ VA  +    + NG      +QG +SQ   + W   R 
Sbjct: 298 YYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRT 357

Query: 240 LNE--------TPTFVPAMISPS---QDSEWNAYQA----PMYPSEISMLPPPTYAVNNI 299
           +NE        +P++   M+ P       EWN Y      P YP  +     P   +N+ 
Sbjct: 358 VNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHP 417

Query: 300 ASETDLYPSHQQV--EEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLN 359
             +    P HQQV  EE+PERPGQPEC +F+K+G CKF+  C YHHP++     P   L+
Sbjct: 418 MYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRS--PVPPAGALS 477

Query: 360 DKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHP 372
             GLP++PDQ VCTYY RYG+CKFGP+C ++HP
Sbjct: 478 PLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHP 503

[Close]
BLAST of Cp4.1LG09g09820 vs. Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.5e-52
Identity = 133/347 (38.33%), Postives = 170/347 (48.99%), Query Frame = 1 

Query: 113 NNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTEC 172
           N  YP R    +C +YL+TGTCKFG+ CKF+HP  K       +L               
Sbjct: 105 NGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRP------ 164

Query: 173 KNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQ------ 232
            NEKEC YY+RTG CK+ + CKF+HP P+   V    S Y+ G   Q   S  Q      
Sbjct: 165 -NEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPG---QSATSPGQHTYPGA 224

Query: 233 ITSWTSPRVLNETPTFVPAMISPS--------------QDSEWNAYQAPM---YPSEISM 292
           +T+WT    L+ + +F+ +   P               Q   WN Y A M    P +   
Sbjct: 225 VTNWT----LSRSASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMGSSSPDDQQR 284

Query: 293 LPPPTYAVNNIASETD------LYPSHQ-----------QVEE-HPERPGQPECSYFLKT 352
            P  T    +  SET       +Y S+Q           Q E   PERP QPEC +++KT
Sbjct: 285 TPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQPECQFYMKT 344

Query: 353 GDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHP 412
           GDCKF ++C +HHPK   +  P C LN  GLPLRP + VCT+YSRYGICKFGP+CKFDHP
Sbjct: 345 GDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHP 404

[Close]
BLAST of Cp4.1LG09g09820 vs. Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 1.7e-48
Identity = 114/296 (38.51%), Postives = 153/296 (51.69%), Query Frame = 1 

Query: 116 YPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKNE 175
           YP R    +C +YL+TGTCKFG+ CKF+HP  K       +L                NE
Sbjct: 98  YPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRP-------NE 157

Query: 176 KECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQ------ITS 235
           KEC YY+RTG CK+G+ CKF+HP P+   V    S Y+ G   Q   S SQ      +T+
Sbjct: 158 KECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPG---QSVTSPSQHTYPGAVTN 217

Query: 236 W---------TSPRVLNETPTFVPAMISPS--QDSEWNAYQAPMYPS----EISMLPPPT 295
           W          SPR    + ++   ++ P   Q   WN Y A +  S    +        
Sbjct: 218 WPLSRSASFIASPRWPGHS-SYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQ 277

Query: 296 YAVNNIASET------DLYPSHQ---------QVEEH---PERPGQPECSYFLKTGDCKF 355
           Y   +  SET       ++ S+Q          V+     PERP QPEC +++KTGDCKF
Sbjct: 278 YYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKF 337

Query: 356 KSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPI 373
            ++C +HHPK   +  P C L+  GLPLRP + +CT+YSRYGICKFGP+CKFDHP+
Sbjct: 338 GAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPM 382

[Close]
BLAST of Cp4.1LG09g09820 vs. TrEMBL
Match: E5GBX3_CUCME (Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.9e-150
Identity = 294/481 (61.12%), Postives = 330/481 (68.61%), Query Frame = 1 

Query: 1   MEPSEAVSVLIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAVSV  HCE+ PSG QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSGFQSSQLHSSVHDPPPFDAQHVTTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN----LEEEEEEEMV--------------VDA----G 120
             VKDFD GGEWEVEKNP E EGN    ++E + +  V              VDA    G
Sbjct: 61  EPVKDFDDGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDGYDDVDEEVDAGDGDG 120

Query: 121 DGGEVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLK 180
           DGGEVE+ G+ RG +N+YPVR EAEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK
Sbjct: 121 DGGEVERKGDWRGKSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLK 180

Query: 181 HENDSAEQTSKTECKNEKECPYYMRTGCCKYGANCKFNH--------------------- 240
           +++DSA   +KTECK      +Y+RTG CK+G  C++NH                     
Sbjct: 181 YDDDSAGTANKTECK------FYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIR 240

Query: 241 PD----PTTVAVPESLSGYN------NGVLLQGGASQSQITSWTSPRVLNETPT------ 300
           PD    P  +       G N      +   + G  S S   +    +  +++        
Sbjct: 241 PDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSP 300

Query: 301 --------FVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQV 360
                   FVPAMISPSQDSEWN YQAP+YPSEIS+LPPP Y VNNIA E DLY SHQQV
Sbjct: 301 RVLNEATTFVPAMISPSQDSEWNGYQAPIYPSEISVLPPPPYVVNNIAPEADLYSSHQQV 360

Query: 361 EEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTY 413
           +E+PERPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTY
Sbjct: 361 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 420

[Close]
BLAST of Cp4.1LG09g09820 vs. TrEMBL
Match: A0A0A0LU93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 2.1e-149
Identity = 286/479 (59.71%), Postives = 326/479 (68.06%), Query Frame = 1 

Query: 1   MEPSEAVSVLIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAVSV  HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN----LEEEEEEEMV--------------VDA--GDG 120
             VKDFDGGGEWEVEKNP E EGN    ++E + +  V              VDA  GDG
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGDGDG 120

Query: 121 GEVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHE 180
           GEVE+ G+ RG +N+YPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK+E
Sbjct: 121 GEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYE 180

Query: 181 NDSAEQTSKTECKNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVP-------------- 240
           +DS    ++TECK      +Y+RTG CK+G  C++NH  P  +  P              
Sbjct: 181 DDSTGTANRTECK------FYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPD 240

Query: 241 -----------------ESLSGYNNGVLLQGGASQSQITSWTSPRVLNETPT-------- 300
                                 + +   + G  S S   +    +  +++          
Sbjct: 241 EKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRV 300

Query: 301 ------FVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQVEE 360
                 FVPAMISPSQD +WN YQAP+YPSEIS+LPPP Y VNNIA ETDLY SHQQV+E
Sbjct: 301 LNEATTFVPAMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDE 360

Query: 361 HPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYS 413
           +PERPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYY 
Sbjct: 361 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 420

[Close]
BLAST of Cp4.1LG09g09820 vs. TrEMBL
Match: V4TTN0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019979mg PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.7e-96
Identity = 202/407 (49.63%), Postives = 249/407 (61.18%), Query Frame = 1 

Query: 31  DPALFDASHVADDDRIHAELQKLDLKDEKEAAVKDFDGGGEWEVEKNPVEGEGNLEEEEE 90
           DP   D  + A    I  EL+ LDL++ +E      D     E+E    E +   EEEEE
Sbjct: 33  DPPPSDLDYTAG---IEEELRNLDLREAEE-----IDSIKAAEIEIVVEEEDEEEEEEEE 92

Query: 91  EEMVVDAGDGGEVEKDGEMRGGNNR---------YPVRSEAEDCAFYLRTGTCKFGSLCK 150
           EE   D  +   +    E++  N           YPVR +A+DC FY++TGTCKFGS CK
Sbjct: 93  EESESDENNKSNIIVQNEIQNENEYGNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCK 152

Query: 151 FNHPLRKRHQVVSEKLKHEND------------SAEQTSKTECKNEKECPYYMRTGCCKY 210
           FNHP+R+++Q   EK+K   +             +E  S+ ECK EKECPYYMR G CKY
Sbjct: 153 FNHPVRRKNQSSKEKVKEREELIERPGQSQSQGQSESQSQIECKGEKECPYYMRNGSCKY 212

Query: 211 GANCKFNHPDPTTVAVPESLSGYNNGVLLQGGA-SQSQITSWTSPRVLNETPTFVPAMIS 270
           GANC+FNHPDPT V   +S SGY NG  +   A SQ+ I SW+SPR LNE   FVP M S
Sbjct: 213 GANCRFNHPDPTAVGGSDSPSGYGNGGSVSSQAPSQASIGSWSSPRALNEPAPFVPMMYS 272

Query: 271 P-----SQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQ---VEEHPERP 330
           P     SQ+SEWN YQ+P+YP E S+   PTY +NN     ++   HQ    V+E PERP
Sbjct: 273 PTPGVPSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVDEFPERP 332

Query: 331 GQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGIC 390
           GQPECSYFL+TGDCK+KS C YHHPKN   K P CTL+DKGLPLRP QNVC+YYSRYGIC
Sbjct: 333 GQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGIC 392

Query: 391 KFGPSCKFDHPILP-ASSTSELKQQPHYSNFNAAEGAEMGG-GSGNG 406
           KFGP+CK+DHPI P AS+   L   P + +    +   M G G+GNG
Sbjct: 393 KFGPACKYDHPIHPDASAEYGLDPPPSFGDSTTRQETGMAGTGNGNG 431

[Close]
BLAST of Cp4.1LG09g09820 vs. TrEMBL
Match: D7SHC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09990 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.3e-87
Identity = 170/330 (51.52%), Postives = 207/330 (62.73%), Query Frame = 1 

Query: 102 EVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHEN 161
           +V K+         +P R    +C +YLRTG CKFG  C++NH   K   V   +L    
Sbjct: 161 QVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLG 220

Query: 162 DSAEQTSKTECKNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNG--VLLQ 221
                        EKECPYYMRTG CKYGANC+FNHPDPT     ES SGY NG  V LQ
Sbjct: 221 LPIRM-------GEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQ 280

Query: 222 GGASQSQITSWTSPRVLNETPTFVPAMISPSQ-----DSEWNAYQAPMYPS---EISMLP 281
           G ASQS + SW+SPR LNE   FVP M SP+Q     + EWN YQAP+YP    E SM P
Sbjct: 281 G-ASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQAPLYPPPPPERSMHP 340

Query: 282 PPTYAVNNIASETDLYPSHQQ-----VEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPK 341
           PP + +NN A++ ++Y  HQQ     +E+ PERPGQPECSYFLKTGDCKF++ C YHHPK
Sbjct: 341 PPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPK 400

Query: 342 NWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPI------LPASSTSE 401
           N   K P CTL+DKGLPLRPDQN+CT+Y+RYGICKFGP+CKFDHP+         S+ S 
Sbjct: 401 NRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVNYGNSASAPSAESG 460

Query: 402 LKQQPHYSNFNAAEGAEMGGGSGNGVTVEQ 411
             Q P +     A+G   G G+GN + ++Q
Sbjct: 461 QDQPPPFGGSVTADGVRPGSGNGNEILIQQ 482

[Close]
BLAST of Cp4.1LG09g09820 vs. TrEMBL
Match: A0A0B2PEA2_GLYSO (Zinc finger CCCH domain-containing protein 43 OS=Glycine soja GN=glysoja_038708 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 6.1e-85
Identity = 168/303 (55.45%), Postives = 198/303 (65.35%), Query Frame = 1 

Query: 108 EMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQT 167
           E  G       RS   +C +YLR+G CKFG  CKFNH   K     + +L          
Sbjct: 269 ENAGEREEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASAAELNFLGLPIRV- 328

Query: 168 SKTECKNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNG--VLLQGGASQS 227
                  EKEC YYMRTG CK+GANC+FNHPDPTTV   +S SGY NG  + LQG  SQS
Sbjct: 329 ------GEKECLYYMRTGSCKFGANCRFNHPDPTTVGGGDSPSGYGNGSSISLQG-VSQS 388

Query: 228 QITSWTSPRVLNETPTFVPAMISPS-----QDSEWNAYQAPMYPSEISMLPPPTYAVNNI 287
            I+SW+S R LNE+  FVP ++SP+     Q SEWN YQAP+Y SE S+ PP TY +NN 
Sbjct: 389 SISSWSSTRPLNESAPFVPVILSPNPGVSPQSSEWNGYQAPVYLSERSLHPPSTYVMNNP 448

Query: 288 ASETDLYPSHQQ---VEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTL 347
           A E+++Y  HQ+   VEE PERPG+PECSYFLKTGDCKFKS C +HHPKN   +LP C L
Sbjct: 449 AMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNL 508

Query: 348 NDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPILPASSTSELKQQPHYSNFNAAEGAE 401
           +DKGLPLRPDQNVCTYY RYGICKFGP+CKFDHP    S+ +   QQ  Y N    + AE
Sbjct: 509 SDKGLPLRPDQNVCTYYRRYGICKFGPACKFDHP--APSTMAGHDQQSTYINSAGVDVAE 561

[Close]
BLAST of Cp4.1LG09g09820 vs. TAIR10
Match: AT3G48440.1 (AT3G48440.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 278.1 bits (710), Expect = 8.8e-75
Identity = 144/291 (49.48%), Postives = 175/291 (60.14%), Query Frame = 1 

Query: 124 DCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKNEKECPYYMR 183
           DC +Y RTG CK+G  C+FNH + K     + +L                 E ECPYYMR
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRP-------GEVECPYYMR 222

Query: 184 TGCCKYGANCKFNHPDPTTVAVPESLS-----GYNNGVLLQGGASQSQITSWTSPRVLNE 243
            G CKYGA CKFNHPDPTT+   +S S     G + G        Q+  TSW+SPR +N 
Sbjct: 223 NGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNG 282

Query: 244 TPTFVPAMISP-----SQDSEWNAYQAPMYPSEISMLPPPT-YAVNNIASETDL----YP 303
           T  F+P M+S      SQ+ EWN YQA +Y SE  +  P T Y +NN ++ET +    Y 
Sbjct: 283 TSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYR 342

Query: 304 SHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQ 363
                EE PERP QPECSY++KTGDCKFK  C YHHPKN   KLP   LNDKGLPLRPDQ
Sbjct: 343 HQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQ 402

Query: 364 NVCTYYSRYGICKFGPSCKFDHPILPASSTSE---LKQQPHYS-NFNAAEG 396
           N+CTYYSRYGICKFGP+C+FDH + P  ST     + + P  S N N ++G
Sbjct: 403 NICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPPQVSANGNESDG 446

[Close]
BLAST of Cp4.1LG09g09820 vs. TAIR10
Match: AT5G63260.2 (AT5G63260.2 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 251.9 bits (642), Expect = 6.7e-67
Identity = 168/428 (39.25%), Postives = 219/428 (51.17%), Query Frame = 1 

Query: 17  PSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDE-KEAAVKDFDGGGEWEVE 76
           PS S S +   +V D A  D +HV+++  +  +L+ + L D  KE +V      G  E +
Sbjct: 17  PSRSSSDEVTVTVADRAPSDLNHVSEE--LSDQLRNVGLDDSAKELSVPISVPQGNVETD 76

Query: 77  KNPVEGEGNLEEEEEEE---MVV-----DAGDGGEVEKDGEMRGGNN---RYPVRSEAED 136
              + G    EEEE  E   M+V     D+ D     + G  + G++    +PVR + +D
Sbjct: 77  SRALFGSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQD 136

Query: 137 -----------------------------------CAFYLRTGTCKFGSLCKFNHPLRKR 196
                                              C +Y RTG CK+G  C+F+H     
Sbjct: 137 LKFLGSMRTRNGKEYIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSH----- 196

Query: 197 HQVVSEKLKHENDSAEQTSKTEC-----KNEKECPYYMRTGCCKYGANCKFNHPDPTTVA 256
                  +K  N  A               EKECP+YMR G CK+G++CKFNHPDPT + 
Sbjct: 197 -------MKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIG 256

Query: 257 VPES--LSGYNNGVLLQGGASQSQITSWTSPRVLNETPT--FVPAMISPS-----QDSEW 316
             +S    G N G       SQ+  TSW+S R +N T T  F+P+M   S     Q S+W
Sbjct: 257 GVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDW 316

Query: 317 NAYQAPM-YPSEISMLPPPTYAVNNIASETDLYPSHQQ---VEEHPERPGQPECSYFLKT 376
           N YQA   YP E S L P +Y VNN  +ET  +  +Q    VEE PERP QPEC+Y+LKT
Sbjct: 317 NGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKT 376

Query: 377 GDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHP 380
           GDCKFK  C YHHPKN   K    + NDKGLPLRPDQ++CT+YSRYGICKFGP+C+FDH 
Sbjct: 377 GDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHS 430

[Close]
BLAST of Cp4.1LG09g09820 vs. TAIR10
Match: AT3G02830.1 (AT3G02830.1 zinc finger protein 1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-46
Identity = 110/290 (37.93%), Postives = 147/290 (50.69%), Query Frame = 1 

Query: 109 MRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTS 168
           MRG    YP R    +C +YL+TGTCKFG  CKF+HP  K    ++ ++     S     
Sbjct: 78  MRG---EYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAG--IAGRV-----SLNMLG 137

Query: 169 KTECKNEKECPYYMRTGCCKYGANCKFNHPDP--TTVAVPESLSGYNNGVLLQGGASQSQ 228
                NE +C Y++RTG CK+G  CKFNHP P  T + VP S      G      +  S 
Sbjct: 138 YPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTS------GQQSYPWSRASF 197

Query: 229 ITS--WTSPRVLNETPTFVPAMISPSQDSEWNAYQAPM---YPS---------------- 288
           I S  W  P   +     +P  + P Q   WN Y   +    PS                
Sbjct: 198 IASPRWQDPS--SYASLIMPQGVVPVQG--WNPYSGQLGSVSPSGTGNDQNYRNLQQNET 257

Query: 289 -EISMLPPPTYAVNNIASETDL--YPSHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIY 348
            E       +++  N  S   L  Y +  +    PERPGQPEC +++KTGDCKF ++C +
Sbjct: 258 IESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKF 317

Query: 349 HHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPI 373
           HHP++     P C L+  GLPLRP + +C +Y+RYGICKFGPSCKFDHP+
Sbjct: 318 HHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPM 347

[Close]
BLAST of Cp4.1LG09g09820 vs. TAIR10
Match: AT5G16540.1 (AT5G16540.1 zinc finger nuclease 3)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-45
Identity = 100/260 (38.46%), Postives = 134/260 (51.54%), Query Frame = 1 

Query: 116 YPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKNE 175
           YP R    +C FYL+TGTCKFG  CKF+HP  K     S        S    S     NE
Sbjct: 84  YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSV-------SVNVLSYPLRPNE 143

Query: 176 KECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRV 235
            +C Y++R G CK+G  CKFNHP   +  +  S+ G      LQ    Q   +   +  V
Sbjct: 144 DDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFV 203

Query: 236 LNETPTFVPAMISPS---QDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQ 295
            N      P +  PS     S+   + +  +    + +P   YA+              +
Sbjct: 204 ANP-----PRLQDPSGFASGSQGGLFSSGFHSG--NSVPLGFYAL-------------PR 263

Query: 296 VEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCT 355
               PERPGQPEC +++KTGDCKF ++C +HHP++     P C L+  GLPLRP + +C 
Sbjct: 264 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCV 316

Query: 356 YYSRYGICKFGPSCKFDHPI 373
           +YSRYGICKFGPSCKFDHP+
Sbjct: 324 FYSRYGICKFGPSCKFDHPM 316

[Close]
BLAST of Cp4.1LG09g09820 vs. TAIR10
Match: AT2G47850.1 (AT2G47850.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 175.3 bits (443), Expect = 8.0e-44
Identity = 102/284 (35.92%), Postives = 141/284 (49.65%), Query Frame = 1 

Query: 115 RYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKN 174
           +YP R     C FYL+TGTCKFG+ CKF+HP      +    L        +        
Sbjct: 86  QYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVRE-------G 145

Query: 175 EKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSG----YNNGVLLQ----GGASQSQ 234
           + EC YY++TG CK+G  CKF+HP P    VP   +     Y +   L     GG S S 
Sbjct: 146 DNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSL 205

Query: 235 ITSWTSPRVLNETPTFVPAMISPS--QDSEWNAYQAPMYPS-----EISMLPPPTYAVNN 294
             + T          + P +++P       W+ Y AP+ P+     + ++     Y V  
Sbjct: 206 RVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVTQ 265

Query: 295 IASETD----LYPSH-------QQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNW 354
           + S T     +YPS        Q+ +  PERPG+PEC Y+LKTGDCKF + C +HHP++ 
Sbjct: 266 LTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDR 325

Query: 355 NLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPI 373
                 C L+  GLPLRP    CT+Y + G CKFG +CKFDHP+
Sbjct: 326 VPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPM 362

[Close]
BLAST of Cp4.1LG09g09820 vs. NCBI nr
Match: gi|778657996|ref|XP_011651936.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sativus])

HSP 1 Score: 607.1 bits (1564), Expect = 2.3e-170
Identity = 314/452 (69.47%), Postives = 342/452 (75.66%), Query Frame = 1 

Query: 1   MEPSEAVSVLIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAVSV  HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNP-------------------VEGEGNLEEEE-EEEMVVDAGDG 120
             VKDFDGGGEWEVEKNP                   V  + + + ++ +EE+    GDG
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGDGDG 120

Query: 121 GEVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSE----- 180
           GEVE+ G+ RG +N+YPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++Q         
Sbjct: 121 GEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQFYLRTGGCK 180

Query: 181 -----KLKHENDSAEQTSKTECK--------NEKECPYYMRTGCCKYGANCKFNHPDPTT 240
                +  H    A  +   E          +EKECPYYMRTG CKYGANCKFNHPDPTT
Sbjct: 181 FGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTT 240

Query: 241 VAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNETPTFVPAMISPSQDSEWNAYQAPM 300
           VA  ESLSGYNNGV LQG ASQSQITSWTSPRVLNE  TFVPAMISPSQD +WN YQAP+
Sbjct: 241 VAGSESLSGYNNGVPLQG-ASQSQITSWTSPRVLNEATTFVPAMISPSQDQDWNGYQAPI 300

Query: 301 YPSEISMLPPPTYAVNNIASETDLYPSHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIY 360
           YPSEIS+LPPP Y VNNIA ETDLY SHQQV+E+PERPGQPECSYFLKTGDCKFKSLC Y
Sbjct: 301 YPSEISVLPPPAYVVNNIAPETDLYSSHQQVDEYPERPGQPECSYFLKTGDCKFKSLCKY 360

Query: 361 HHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPILPASST-SEL 413
           HHPKN N KLPTCTLNDKGLPLRPDQNVCTYY RYGICKFGPSCKFDHP LP+SST  EL
Sbjct: 361 HHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYRRYGICKFGPSCKFDHPFLPSSSTVGEL 420

[Close]
BLAST of Cp4.1LG09g09820 vs. NCBI nr
Match: gi|659067397|ref|XP_008439243.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 2.7e-150
Identity = 294/481 (61.12%), Postives = 330/481 (68.61%), Query Frame = 1 

Query: 1   MEPSEAVSVLIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAVSV  HCE+ PSG QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSGFQSSQLHSSVHDPPPFDAQHVTTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN----LEEEEEEEMV--------------VDA----G 120
             VKDFD GGEWEVEKNP E EGN    ++E + +  V              VDA    G
Sbjct: 61  EPVKDFDDGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDGYDDVDEEVDAGDGDG 120

Query: 121 DGGEVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLK 180
           DGGEVE+ G+ RG +N+YPVR EAEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK
Sbjct: 121 DGGEVERKGDWRGKSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLK 180

Query: 181 HENDSAEQTSKTECKNEKECPYYMRTGCCKYGANCKFNH--------------------- 240
           +++DSA   +KTECK      +Y+RTG CK+G  C++NH                     
Sbjct: 181 YDDDSAGTANKTECK------FYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIR 240

Query: 241 PD----PTTVAVPESLSGYN------NGVLLQGGASQSQITSWTSPRVLNETPT------ 300
           PD    P  +       G N      +   + G  S S   +    +  +++        
Sbjct: 241 PDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSP 300

Query: 301 --------FVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQV 360
                   FVPAMISPSQDSEWN YQAP+YPSEIS+LPPP Y VNNIA E DLY SHQQV
Sbjct: 301 RVLNEATTFVPAMISPSQDSEWNGYQAPIYPSEISVLPPPPYVVNNIAPEADLYSSHQQV 360

Query: 361 EEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTY 413
           +E+PERPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTY
Sbjct: 361 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 420

[Close]
BLAST of Cp4.1LG09g09820 vs. NCBI nr
Match: gi|449469596|ref|XP_004152505.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sativus])

HSP 1 Score: 537.0 bits (1382), Expect = 3.0e-149
Identity = 286/479 (59.71%), Postives = 326/479 (68.06%), Query Frame = 1 

Query: 1   MEPSEAVSVLIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAVSV  HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN----LEEEEEEEMV--------------VDA--GDG 120
             VKDFDGGGEWEVEKNP E EGN    ++E + +  V              VDA  GDG
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGDGDG 120

Query: 121 GEVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHE 180
           GEVE+ G+ RG +N+YPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK+E
Sbjct: 121 GEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYE 180

Query: 181 NDSAEQTSKTECKNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVP-------------- 240
           +DS    ++TECK      +Y+RTG CK+G  C++NH  P  +  P              
Sbjct: 181 DDSTGTANRTECK------FYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPD 240

Query: 241 -----------------ESLSGYNNGVLLQGGASQSQITSWTSPRVLNETPT-------- 300
                                 + +   + G  S S   +    +  +++          
Sbjct: 241 EKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRV 300

Query: 301 ------FVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQVEE 360
                 FVPAMISPSQD +WN YQAP+YPSEIS+LPPP Y VNNIA ETDLY SHQQV+E
Sbjct: 301 LNEATTFVPAMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDE 360

Query: 361 HPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYS 413
           +PERPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYY 
Sbjct: 361 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 420

[Close]
BLAST of Cp4.1LG09g09820 vs. NCBI nr
Match: gi|778657993|ref|XP_011651926.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 6.6e-149
Identity = 286/479 (59.71%), Postives = 326/479 (68.06%), Query Frame = 1 

Query: 1   MEPSEAVSVLIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAVSV  HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN----LEEEEEEEMV--------------VDA--GDG 120
             VKDFDGGGEWEVEKNP E EGN    ++E + +  V              VDA  GDG
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGDGDG 120

Query: 121 GEVEKDGEMRGGNNRYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHE 180
           GEVE+ G+ RG +N+YPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK+E
Sbjct: 121 GEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYE 180

Query: 181 NDSAEQTSKTECKNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVP-------------- 240
           +DS    ++TECK      +Y+RTG CK+G  C++NH  P  +  P              
Sbjct: 181 DDSTGTANRTECK--VSIVFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPD 240

Query: 241 -----------------ESLSGYNNGVLLQGGASQSQITSWTSPRVLNETPT-------- 300
                                 + +   + G  S S   +    +  +++          
Sbjct: 241 EKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRV 300

Query: 301 ------FVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQVEE 360
                 FVPAMISPSQD +WN YQAP+YPSEIS+LPPP Y VNNIA ETDLY SHQQV+E
Sbjct: 301 LNEATTFVPAMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDE 360

Query: 361 HPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYS 413
           +PERPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYY 
Sbjct: 361 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 420

[Close]
BLAST of Cp4.1LG09g09820 vs. NCBI nr
Match: gi|567895046|ref|XP_006440011.1| (hypothetical protein CICLE_v10019979mg [Citrus clementina])

HSP 1 Score: 360.5 bits (924), Expect = 3.8e-96
Identity = 202/407 (49.63%), Postives = 249/407 (61.18%), Query Frame = 1 

Query: 31  DPALFDASHVADDDRIHAELQKLDLKDEKEAAVKDFDGGGEWEVEKNPVEGEGNLEEEEE 90
           DP   D  + A    I  EL+ LDL++ +E      D     E+E    E +   EEEEE
Sbjct: 33  DPPPSDLDYTAG---IEEELRNLDLREAEE-----IDSIKAAEIEIVVEEEDEEEEEEEE 92

Query: 91  EEMVVDAGDGGEVEKDGEMRGGNNR---------YPVRSEAEDCAFYLRTGTCKFGSLCK 150
           EE   D  +   +    E++  N           YPVR +A+DC FY++TGTCKFGS CK
Sbjct: 93  EESESDENNKSNIIVQNEIQNENEYGNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCK 152

Query: 151 FNHPLRKRHQVVSEKLKHEND------------SAEQTSKTECKNEKECPYYMRTGCCKY 210
           FNHP+R+++Q   EK+K   +             +E  S+ ECK EKECPYYMR G CKY
Sbjct: 153 FNHPVRRKNQSSKEKVKEREELIERPGQSQSQGQSESQSQIECKGEKECPYYMRNGSCKY 212

Query: 211 GANCKFNHPDPTTVAVPESLSGYNNGVLLQGGA-SQSQITSWTSPRVLNETPTFVPAMIS 270
           GANC+FNHPDPT V   +S SGY NG  +   A SQ+ I SW+SPR LNE   FVP M S
Sbjct: 213 GANCRFNHPDPTAVGGSDSPSGYGNGGSVSSQAPSQASIGSWSSPRALNEPAPFVPMMYS 272

Query: 271 P-----SQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASETDLYPSHQQ---VEEHPERP 330
           P     SQ+SEWN YQ+P+YP E S+   PTY +NN     ++   HQ    V+E PERP
Sbjct: 273 PTPGVPSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVDEFPERP 332

Query: 331 GQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGIC 390
           GQPECSYFL+TGDCK+KS C YHHPKN   K P CTL+DKGLPLRP QNVC+YYSRYGIC
Sbjct: 333 GQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGIC 392

Query: 391 KFGPSCKFDHPILP-ASSTSELKQQPHYSNFNAAEGAEMGG-GSGNG 406
           KFGP+CK+DHPI P AS+   L   P + +    +   M G G+GNG
Sbjct: 393 KFGPACKYDHPIHPDASAEYGLDPPPSFGDSTTRQETGMAGTGNGNG 431

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g09820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H43_ARATH1.6e-7349.48Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g484... [more]
C3H67_ARATH4.9e-6740.53Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g632... [more]
C3H65_ORYSJ6.2e-5441.03Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN... [more]
C3H66_ORYSJ7.5e-5238.33Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN... [more]
C3H63_ORYSJ1.7e-4838.51Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN... [more]
BLAST of Cp4.1LG09g09820 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBX3_CUCME1.9e-15061.12Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LU93_CUCSA2.1e-14959.71Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1[more]
V4TTN0_9ROSI2.7e-9649.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019979mg PE=4 SV=1[more]
D7SHC4_VITVI1.3e-8751.52Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09990 PE=4 SV=... [more]
A0A0B2PEA2_GLYSO6.1e-8555.45Zinc finger CCCH domain-containing protein 43 OS=Glycine soja GN=glysoja_038708 ... [more]
BLAST of Cp4.1LG09g09820 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48440.18.8e-7549.48 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G63260.26.7e-6739.25 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT3G02830.13.8e-4637.93 zinc finger protein 1[more]
AT5G16540.11.5e-4538.46 zinc finger nuclease 3[more]
AT2G47850.18.0e-4435.92 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Cp4.1LG09g09820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778657996|ref|XP_011651936.1|2.3e-17069.47PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sat... [more]
gi|659067397|ref|XP_008439243.1|2.7e-15061.12PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo][more]
gi|449469596|ref|XP_004152505.1|3.0e-14959.71PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sat... [more]
gi|778657993|ref|XP_011651926.1|6.6e-14959.71PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sat... [more]
gi|567895046|ref|XP_006440011.1|3.8e-9649.63hypothetical protein CICLE_v10019979mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0048856 anatomical structure development
biological_process GO:0016043 cellular component organization
biological_process GO:0008152 metabolic process
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044767 single-organism developmental process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09820.1Cp4.1LG09g09820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 178..197
score: 7.7E-5coord: 125..144
score: 2.6E-4coord: 350..370
score: 3.
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 175..198
score: 9.3E-9coord: 123..145
score: 2.0E-9coord: 348..371
score: 4.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 345..372
score: 2.7E-5coord: 174..199
score: 2.7E-6coord: 119..146
score: 1.2E-5coord: 299..326
score:
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 345..373
score: 14.812coord: 299..327
score: 12.436coord: 173..200
score: 15.225coord: 119..147
score: 14
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 343..371
score: 2.62E-6coord: 175..200
score: 1.07E-5coord: 119..149
score: 5.4
NoneNo IPR availablePANTHERPTHR12506PROTEIN PHOSPHATASE RELATEDcoord: 58..380
score: 6.8E
NoneNo IPR availablePANTHERPTHR12506:SF20ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43coord: 58..380
score: 6.8E
NoneNo IPR availablePFAMPF14608zf-CCCH_2coord: 305..325
score: