CmoCh18G001840 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G001840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Zinc finger CCCH domain-containing protein 43) (2.7.11.1)
LocationCmo_Chr18 : 1268440 .. 1272145 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGGCGAAGCGCAAACGGCCGCAGTCAGAAAGTGACCTTTTCCTGTTCTTAGTTCCCACTTAGTGTCAATACCCATTTCTCCATGTACTTTATTATTCTCTGTAGCAGCTAGGGTTTTCTTGGGTTCAAATGTGACGCAGAATGGAACCTTCTGAAGCTGTTTTCGTCCCTATTCACTGTGAATCATTGCCTTCTGGGTCTCAATCTCTACAGTTTCATGGCTCTGTTCATGATCCTGCACTATTTGATGCATCGCATGTGGCCGATGATGATCGCATCCATGCAGAGCTTCAGAAATTGGATTTGAAGGATGAGAAAGAGGCGGCGGTGAAGGATTTTGACGGCGGCGGAGAATGGGAAGTTGAGAAGAATCCTGTTGAAGGTGAAGGAAATTTGGAGGAGGAGGTGGTGGTGGTGGATGCAGGCGACGGCGGTGAGGTGGAGAAGGAAGGGGAAATGAGGGGTGGAAACAACCAGTACCCTGTACGGTCAGAGGCTGAGGATTGTGCCTTTTACCTTAGGACTGGCACTTGCAAGTTTGGATCATTGTGTAAATTCAATCATCCACTGCGAAAGAGACATCAGGTGTGGTTCTGGAGATCTTATTTACTTGTGTAAGCTAATACCTCTGTTTGAATGCTTTGTTCTTTGTATTGGTTTGTTGATTGTTAAACCTCTGTTGATAGGTTTTAGTGCTGTTCTCTTTGCATGTATAGCTTTTTTTTATCATTGCATCAATTGGAGAGGGGAACGAAGCATTACTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGATACGTTTTGAAACTGTGAGGTTGACGGCGATATGTAGTGGGTTAAAGCGGACAATATCTACTAGCAGTGGGCTTGGACAGTTACAAATGATATTAGAGCTGATCACCTTGTGGTGTGTCAGTGAGGATGTTGGGCTCCCAAGGGGGTGGATTGTGAGATTCCACGTCGGTTGGAGAGAAAAACGAAGCAAGTTGTGGAAACCTTTCCCTAGTAGACGCGTTTTAGAACCGTGAGGTTGACGAGGATGCGTAATGGGCCGAAGAGGACAATATTTGTTAACAGTGGGCTTGAGTTCTCCCTAATAGATGTTGATCCTTAAGGGGGTGGATGGTGAGATCCCACATTGATTGGAGATGAGAACGAAGTCTTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAAATGCGTTTTGAAACTGTGAGGCTGACGGCGATACATAGCGGGTTAAAGCGGACAATATCTACTAGCGGTAAGCTTGGATGGTTACAATAGTATCAAAGCCGATCACTGGGTGGTGTGTTAGTAAGGACGTTAGGCTTCCAAGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGAAAAACGAAGCAGGTTGTGGAAACCTTTCCCTAGTAGACGCGTTTTAGAACCGTGAGGTTGACGGGGATGCGTAACGGGCCGAAGAGGACAATATTTGTTAACAGTGGGCTTGAGTTCTCCCTAGTAGATGCTGACCCCTAAGGGGGTGGATGGTGAGATCCCACATTGATTGGAGATGAGAATGAAGTCTTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTGAAACTGTGAGGCTGACGGCGATACATAGCGGGTTAAAGCGGACAATTTCTACTAGCGATAAGCTTGGATGGTTACAATAGTATCAGAGCCGATCACTGGGTGGTGTGTTAGTAAGGACGTTAGGCTTCCAAGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGAAAAACGAAGCAGGTTGTGGAAACCTTTTTCTAGTAGACGCGTTATAGAACCGTGAGGTTGATGGCGATGCGTAACGGGCCGAAGAGGACAATATCTGTTAGCGGTGGGCTTGGGCTCTCTCTAGTAGACGCTGGCCCCTAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGATGGGAATGACGCATTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTGAAACTGTGAGGTTGATAGCGATAAGTAATGGGCCAAAGCGGACAATATCCACTCACGGTTGGCTTCGGCTGTTACAAATGGTATCAGAGCCAGTCATCGGGTGGTGTGCCAGCGAGGACGCAGGGTATCTACTAGCAGTGAGCTTGGACTTGGGCTTGGGCGGTTACAAAGTTGAGATTTGCCGGTTTCCAATTCATCGGCATTTACCTGTTTATTTTAAGTTTGTTCCAGGCTCTTCTTCTCAGCTACTTCAGTCCTAATTGTTCTATTGAAACTTCTAACATGATCACTGGATAACATTTATTCTTGATGGGTTTCATTTTTGTTCAATTTGAAAGGTTGTTTCTGAGAAATTGAAGCACGAGAACGATTCGGCCGAGCAGACGAGCAAGACCGAATGCAAGGTTTCCATTGTTGTTATGTTTTCATGAACAAATTTCAAGTATTTTGCTTAGTTAAATGGTTTGATGCATACCCCTGTTCTGAACTTTTCTTATATTCCTTTAAGTTCCCGTGTTTACATGATCGATTGATGTATGATATGCGTGATCTACTGCTATCGGTTAACTTTTACACTTCACGAGCCATTCGCAGTATTACTCGAGGACCGGGGGTTGTAAATTCGGAACAGCCTGTAGATATAACCACACGAGACCGAGAGCATTGCCAAACCCAATTCTCGAGCTTAACTTCCTTGGTTTGCCAATCCGACTAGTTTAGTTCGTAACTTTGACATCTTTCTAGATTGGATCCTTTATCTCACTTATCTTGAAGAATTTAATGATCTTTTTATTGACAGAACGAAAAAGAATGTCCCTATTACATGCGCACGGGATGCTGCAAATATGGAGCGAATTGCAAGTTTAATCATCCCGATCCTACTACCGTTGCTGTACCGGAATCGCTGTCGGGATATAACAATGGAGTGTTGCTACAAGGTGGTGCATCACAATCACAGATCACATCCTGGACTTCACCAAGAGTGCTGAATGAAACACCAACATTTGTACCTGCTATGATTTCACCTTCTCAAGATTCAGAATGGAACGCATACCAGGTATCGTATTACGTTCATCTCGGATGGTCTGGTTTAAAGGATATCGGTATCGTATTGACTTTATCTGTGGTTTGTTCATGTTAAGGCTCCCATGTATCCATCAGAAATCAGCATGCTTCCACCCCCAACGTATGCCGTGAACAATATAGCATCGGGGACGGATCTTTATCCTTCTCATCAGCAAGTAGAAGAACATCCCGAACGACCTGGTCAACCCGAATGCAGCTACTTTCTAAAGACAGGGGATTGTAAATTTAAATCTCTTTGCATATATCACCACCCGAAAAATTGGAACCTGAAGTTACCGACCTGCACGCTCAATGACAAAGGCCTGCCTTTGAGACCTGTAAGCTTGTCCTTCTCATTTCCTGGTTGTTTATATAATAGGACTTCTCTGTAGAAAATACCTCAAGGATAAATTTTTATGTGACATTCAGGATCAGAACGTATGCACGTATTACAGTCGCTACGGCATCTGTAAGTTCGGGCCGTCGTGCAAGTTCGATCATCCTATGCTTCCAGCTTCTTCAACGAGCGAGCTTAAACAGCAGCCTCACTACAGCAACTTTAATGCTGCAGAAGGGGCTGAAATGGGCGGAGGGAGTGGAAATGGCGTCACAGTTGAGCAGTCTGCATAA

mRNA sequence

AGAGGCGAAGCGCAAACGGCCGCAGTCAGAAAGTGACCTTTTCCTGTTCTTAGTTCCCACTTAGTGTCAATACCCATTTCTCCATGTACTTTATTATTCTCTGTAGCAGCTAGGGTTTTCTTGGGTTCAAATGTGACGCAGAATGGAACCTTCTGAAGCTGTTTTCGTCCCTATTCACTGTGAATCATTGCCTTCTGGGTCTCAATCTCTACAGTTTCATGGCTCTGTTCATGATCCTGCACTATTTGATGCATCGCATGTGGCCGATGATGATCGCATCCATGCAGAGCTTCAGAAATTGGATTTGAAGGATGAGAAAGAGGCGGCGGTGAAGGATTTTGACGGCGGCGGAGAATGGGAAGTTGAGAAGAATCCTGTTGAAGGTGAAGGAAATTTGGAGGAGGAGGTGGTGGTGGTGGATGCAGGCGACGGCGGTGAGGTGGAGAAGGAAGGGGAAATGAGGGGTGGAAACAACCAGTACCCTGTACGGTCAGAGGCTGAGGATTGTGCCTTTTACCTTAGGACTGGCACTTGCAAGTTTGGATCATTGTGTAAATTCAATCATCCACTGCGAAAGAGACATCAGGTTGTTTCTGAGAAATTGAAGCACGAGAACGATTCGGCCGAGCAGACGAGCAAGACCGAATGCAAGTATTACTCGAGGACCGGGGGTTGTAAATTCGGAACAGCCTGTAGATATAACCACACGAGACCGAGAGCATTGCCAAACCCAATTCTCGAGCTTAACTTCCTTGGTTTGCCAATCCGACTAAACGAAAAAGAATGTCCCTATTACATGCGCACGGGATGCTGCAAATATGGAGCGAATTGCAAGTTTAATCATCCCGATCCTACTACCGTTGCTGTACCGGAATCGCTGTCGGGATATAACAATGGAGTGTTGCTACAAGGTGGTGCATCACAATCACAGATCACATCCTGGACTTCACCAAGAGTGCTGAATGAAACACCAACATTTGTACCTGCTATGATTTCACCTTCTCAAGATTCAGAATGGAACGCATACCAGGCTCCCATGTATCCATCAGAAATCAGCATGCTTCCACCCCCAACGTATGCCGTGAACAATATAGCATCGGGGACGGATCTTTATCCTTCTCATCAGCAAGTAGAAGAACATCCCGAACGACCTGGTCAACCCGAATGCAGCTACTTTCTAAAGACAGGGGATTGTAAATTTAAATCTCTTTGCATATATCACCACCCGAAAAATTGGAACCTGAAGTTACCGACCTGCACGCTCAATGACAAAGGCCTGCCTTTGAGACCTGATCAGAACGTATGCACGTATTACAGTCGCTACGGCATCTGTAAGTTCGGGCCGTCGTGCAAGTTCGATCATCCTATGCTTCCAGCTTCTTCAACGAGCGAGCTTAAACAGCAGCCTCACTACAGCAACTTTAATGCTGCAGAAGGGGCTGAAATGGGCGGAGGGAGTGGAAATGGCGTCACAGTTGAGCAGTCTGCATAA

Coding sequence (CDS)

ATGGAACCTTCTGAAGCTGTTTTCGTCCCTATTCACTGTGAATCATTGCCTTCTGGGTCTCAATCTCTACAGTTTCATGGCTCTGTTCATGATCCTGCACTATTTGATGCATCGCATGTGGCCGATGATGATCGCATCCATGCAGAGCTTCAGAAATTGGATTTGAAGGATGAGAAAGAGGCGGCGGTGAAGGATTTTGACGGCGGCGGAGAATGGGAAGTTGAGAAGAATCCTGTTGAAGGTGAAGGAAATTTGGAGGAGGAGGTGGTGGTGGTGGATGCAGGCGACGGCGGTGAGGTGGAGAAGGAAGGGGAAATGAGGGGTGGAAACAACCAGTACCCTGTACGGTCAGAGGCTGAGGATTGTGCCTTTTACCTTAGGACTGGCACTTGCAAGTTTGGATCATTGTGTAAATTCAATCATCCACTGCGAAAGAGACATCAGGTTGTTTCTGAGAAATTGAAGCACGAGAACGATTCGGCCGAGCAGACGAGCAAGACCGAATGCAAGTATTACTCGAGGACCGGGGGTTGTAAATTCGGAACAGCCTGTAGATATAACCACACGAGACCGAGAGCATTGCCAAACCCAATTCTCGAGCTTAACTTCCTTGGTTTGCCAATCCGACTAAACGAAAAAGAATGTCCCTATTACATGCGCACGGGATGCTGCAAATATGGAGCGAATTGCAAGTTTAATCATCCCGATCCTACTACCGTTGCTGTACCGGAATCGCTGTCGGGATATAACAATGGAGTGTTGCTACAAGGTGGTGCATCACAATCACAGATCACATCCTGGACTTCACCAAGAGTGCTGAATGAAACACCAACATTTGTACCTGCTATGATTTCACCTTCTCAAGATTCAGAATGGAACGCATACCAGGCTCCCATGTATCCATCAGAAATCAGCATGCTTCCACCCCCAACGTATGCCGTGAACAATATAGCATCGGGGACGGATCTTTATCCTTCTCATCAGCAAGTAGAAGAACATCCCGAACGACCTGGTCAACCCGAATGCAGCTACTTTCTAAAGACAGGGGATTGTAAATTTAAATCTCTTTGCATATATCACCACCCGAAAAATTGGAACCTGAAGTTACCGACCTGCACGCTCAATGACAAAGGCCTGCCTTTGAGACCTGATCAGAACGTATGCACGTATTACAGTCGCTACGGCATCTGTAAGTTCGGGCCGTCGTGCAAGTTCGATCATCCTATGCTTCCAGCTTCTTCAACGAGCGAGCTTAAACAGCAGCCTCACTACAGCAACTTTAATGCTGCAGAAGGGGCTGAAATGGGCGGAGGGAGTGGAAATGGCGTCACAGTTGAGCAGTCTGCATAA
Homology
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BLAST of CmoCh18G001840 vs. Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.4e-104
Identity = 207/431 (48.03%), Postives = 263/431 (61.02%), Query Frame = 1 

Query: 28  SVHDPALFDASHVADDDRIHAELQKLDLKD------EKEAAVKDFDGGGEWEVEKNPVEG 87
           S HD +L D +H A+D  +  +L+ + L +      EK  +V + +GG +        + 
Sbjct: 24  SSHDRSLSDLNHAAED--LSDKLKNVGLNEVTKEQSEKMMSVSESNGGLDSNAVVTINQE 83

Query: 88  EGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNH 147
           E   EE+      GDG   E E E     N YPVR  AEDC+FY+RTG+CKFGS CKFNH
Sbjct: 84  EEEEEEDRDGYGYGDGWS-ENESE-----NVYPVRPGAEDCSFYMRTGSCKFGSSCKFNH 143

Query: 148 PLRKRHQVVSE-KLKHENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILE 207
           PL ++ Q+  + K++ + D   +    +CKYY RTGGCK+G  CR+NHT P++      E
Sbjct: 144 PLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPE 203

Query: 208 LNFLGLPIRLNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLS-----GYNNGVLL 267
           LNFLGLP+R  E ECPYYMR G CKYGA CKFNHPDPTT+   +S S     G + G   
Sbjct: 204 LNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFS 263

Query: 268 QGGASQSQITSWTSPRVLNETPTFVPAMISP-----SQDSEWNAYQAPMYPSEISMLPPP 327
                Q+  TSW+SPR +N T  F+P M+S      SQ+ EWN YQA +Y SE  +  P 
Sbjct: 264 PKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPS 323

Query: 328 T-YAVNNIASGTDL----YPSHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNW 387
           T Y +NN ++ T +    Y      EE PERP QPECSY++KTGDCKFK  C YHHPKN 
Sbjct: 324 TTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNR 383

Query: 388 NLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPMLPASSTSE---LKQQP 433
             KLP   LNDKGLPLRPDQN+CTYYSRYGICKFGP+C+FDH + P  ST     + + P
Sbjct: 384 LPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPP 443

[Close]
BLAST of CmoCh18G001840 vs. Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 365.2 bits (936), Expect = 1.1e-99
Identity = 194/414 (46.86%), Postives = 254/414 (61.35%), Query Frame = 1 

Query: 17  PSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDE-KEAAVKDFDGGGEWEVE 76
           PS S S +   +V D A  D +HV+++  +  +L+ + L D  KE +V      G  E +
Sbjct: 17  PSRSSSDEVTVTVADRAPSDLNHVSEE--LSDQLRNVGLDDSAKELSVPISVPQGNVETD 76

Query: 77  KNPVEGEGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGS 136
              + G    EEE              EG  +     YPVR ++EDC+FY+RTG+CK+GS
Sbjct: 77  SRALFGSDQKEEE--------------EGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGS 136

Query: 137 LCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALP 196
            CKFNHP+R++ Q+  E+++  ++  E     ECKYY RTGGCK+G +CR++H +    P
Sbjct: 137 SCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSP 196

Query: 197 NPILELNFLGLPIRLNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPES--LSGYNNGV 256
             + ELNFLGLPIR  EKECP+YMR G CK+G++CKFNHPDPT +   +S    G N G 
Sbjct: 197 ASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGS 256

Query: 257 LLQGGASQSQITSWTSPRVLNETPT--FVPAMISPS-----QDSEWNAYQA-PMYPSEIS 316
                 SQ+  TSW+S R +N T T  F+P+M   S     Q S+WN YQA   YP E S
Sbjct: 257 FSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERS 316

Query: 317 MLPPPTYAVNNIASGTDLYPSHQ---QVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHP 376
            L P +Y VNN  + T  +  +Q    VEE PERP QPEC+Y+LKTGDCKFK  C YHHP
Sbjct: 317 PLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHP 376

Query: 377 KNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPMLPASSTS 417
           KN   K    + NDKGLPLRPDQ++CT+YSRYGICKFGP+C+FDH + P  S S
Sbjct: 377 KNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIPPTFSPS 414

[Close]
BLAST of CmoCh18G001840 vs. Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 6.9e-67
Identity = 159/416 (38.22%), Postives = 214/416 (51.44%), Query Frame = 1 

Query: 81  GEGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFN 140
           G    EE +  +  G G  +E        +  YP R    DC++Y+RTG C+FG  CKFN
Sbjct: 39  GVAAAEEAMWQMTLGGGESME--------STPYPERIGEPDCSYYMRTGLCRFGMTCKFN 98

Query: 141 HPLRKRHQVVSEKLKHENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILE 200
           HP  ++  V + ++  E     +  + EC+YY +TG CKFG  C+++H R +A     ++
Sbjct: 99  HPPNRKLAVAAARMNGEYPY--RVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQ 158

Query: 201 LNFLGLPIRLNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGAS 260
           LN LG P+R NEKEC YY+RTG CK+ + CKF+HP P+   V    S Y+ G   Q   S
Sbjct: 159 LNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPG---QSATS 218

Query: 261 QSQ------ITSWTSPRVLNETPTFVPA-----------MISPS---QDSEWNAYQAPM- 320
             Q      +T+WT    L+ + +F+ +           +I P    Q   WN Y A M 
Sbjct: 219 PGQHTYPGAVTNWT----LSRSASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMG 278

Query: 321 --YPSEISMLPPPTYAVNNIASGT------DLYPSHQ-----------QVEE-HPERPGQ 380
              P +    P  T    +  S T       +Y S+Q           Q E   PERP Q
Sbjct: 279 SSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQ 338

Query: 381 PECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKF 440
           PEC +++KTGDCKF ++C +HHPK   +  P C LN  GLPLRP + VCT+YSRYGICKF
Sbjct: 339 PECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKF 398

Query: 441 GPSCKFDHPM---LPASSTSEL--KQQPHY--SNFNAAEGAEMGGGSGNGVTVEQS 449
           GP+CKFDHPM   +  S+TS        HY  S      G  + GGSG    V QS
Sbjct: 399 GPNCKFDHPMGTLMYGSATSPRGDVSSMHYQLSPSPGHPGILLDGGSGRSHRVPQS 437

[Close]
BLAST of CmoCh18G001840 vs. Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2)

HSP 1 Score: 246.9 bits (629), Expect = 4.2e-64
Identity = 136/341 (39.88%), Postives = 185/341 (54.25%), Query Frame = 1 

Query: 104 GEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQ 163
           G M+ G   YP RS   DC +YLRTG C+FG  C+FNHP  +   + S ++K E    E+
Sbjct: 70  GAMQPG--PYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGEYP--ER 129

Query: 164 TSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECPYYMRTGC 223
             + EC+YY +TG CKFG  C+++H R +A     ++LN LG P+R +EKEC YY++TG 
Sbjct: 130 MGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQ 189

Query: 224 CKYGANCKFNHPDPTTVAVPESLSGYNNGV---LLQGGASQSQITSWTSPR------VLN 283
           CKYG  CKF+HP+          S     V      G      + SW  PR         
Sbjct: 190 CKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRW 249

Query: 284 ETPTFVPAMISPS---QDSEWNAYQAPMYP--SEISMLPPP----TYAVN---NIASG-- 343
           + P+    MI P    Q   WN+Y   M P  S  S L  P    TY  +   + ++G  
Sbjct: 250 QNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQ 309

Query: 344 -------TDLYP----SHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKL 403
                  +  YP    + Q+    PERP QPEC Y++KTGDCKF ++C +HHP+  ++  
Sbjct: 310 GMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPT 369

Query: 404 PTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPML 411
           P C L+  GLPLRP + +C +YSRYGICKFG +CKFDHP +
Sbjct: 370 PDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTM 406

[Close]
BLAST of CmoCh18G001840 vs. Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-63
Identity = 125/279 (44.80%), Postives = 163/279 (58.42%), Query Frame = 1 

Query: 153 KLKHENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPI--LELNFLGLPIRL 212
           K K +   +E +S+ ECKYYS  GGCKFG AC+Y H   +        ++LNFLGLP+R 
Sbjct: 227 KEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRP 286

Query: 213 NEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVL----LQGGASQSQITS 272
            EKECPYYMRTG CKY  NCKF+HPDP+ VA  +    + NG      +QG +SQ   + 
Sbjct: 287 GEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASI 346

Query: 273 WTSPRVLNE--------TPTFVPAMISPS---QDSEWNAYQA----PMYPSEISMLPPPT 332
           W   R +NE        +P++   M+ P       EWN Y      P YP  +     P 
Sbjct: 347 WPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPA 406

Query: 333 YAVNNIASGTDLYPSHQQV--EEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKL 392
             +N+        P HQQV  EE+PERPGQPEC +F+K+G CKF+  C YHHP+  +   
Sbjct: 407 APINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPR--SPVP 466

Query: 393 PTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHP 409
           P   L+  GLP++PDQ VCTYY RYG+CKFGP+C ++HP
Sbjct: 467 PAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHP 503

[Close]
BLAST of CmoCh18G001840 vs. TrEMBL
Match: E5GBX3_CUCME (Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 1.6e-211
Identity = 368/476 (77.31%), Postives = 392/476 (82.35%), Query Frame = 1 

Query: 1   MEPSEAVFVPIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAV VP HCE+ PSG QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSGFQSSQLHSSVHDPPPFDAQHVTTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN------------------------LEEEVVVVDA-G 120
             VKDFD GGEWEVEKNP E EGN                        ++EEV   D  G
Sbjct: 61  EPVKDFDDGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDGYDDVDEEVDAGDGDG 120

Query: 121 DGGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLK 180
           DGGEVE++G+ RG +NQYPVR EAEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK
Sbjct: 121 DGGEVERKGDWRGKSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLK 180

Query: 181 HENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKEC 240
           +++DSA   +KTECK+Y RTGGCKFG ACRYNHTR RAL +PILELNFLGLPIR +EKEC
Sbjct: 181 YDDDSAGTANKTECKFYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIRPDEKEC 240

Query: 241 PYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNE 300
           PYYMRTG CKYGANCKFNHPDPTTVA  ESLSGYNNGV LQ GASQSQITSWTSPRVLNE
Sbjct: 241 PYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQ-GASQSQITSWTSPRVLNE 300

Query: 301 TPTFVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQVEEHPE 360
             TFVPAMISPSQDSEWN YQAP+YPSEIS+LPPP Y VNNIA   DLY SHQQV+E+PE
Sbjct: 301 ATTFVPAMISPSQDSEWNGYQAPIYPSEISVLPPPPYVVNNIAPEADLYSSHQQVDEYPE 360

Query: 361 RPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYG 420
           RPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYYSRYG
Sbjct: 361 RPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYSRYG 420

Query: 421 ICKFGPSCKFDHPMLPASST-SELKQQPHYSNFNAAEGAEM-GGGSGNGVTVEQSA 450
           ICKFGPSCKFDHP LP SST  EL+QQPHY NF+AAEGAEM GG SGN  TVEQSA
Sbjct: 421 ICKFGPSCKFDHPFLPTSSTVGELEQQPHYGNFSAAEGAEMAGGASGNSATVEQSA 475

[Close]
BLAST of CmoCh18G001840 vs. TrEMBL
Match: A0A0A0LU93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 2.3e-210
Identity = 364/475 (76.63%), Postives = 391/475 (82.32%), Query Frame = 1 

Query: 1   MEPSEAVFVPIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAV VP HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN------------------------LEEEVVVVDAGD 120
             VKDFDGGGEWEVEKNP E EGN                        ++EEV   D GD
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGD-GD 120

Query: 121 GGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKH 180
           GGEVE++G+ RG +NQYPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK+
Sbjct: 121 GGEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKY 180

Query: 181 ENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECP 240
           E+DS    ++TECK+Y RTGGCKFG ACRYNHTRPRAL +PILELNFLGLPIR +EKECP
Sbjct: 181 EDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECP 240

Query: 241 YYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNET 300
           YYMRTG CKYGANCKFNHPDPTTVA  ESLSGYNNGV LQ GASQSQITSWTSPRVLNE 
Sbjct: 241 YYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQ-GASQSQITSWTSPRVLNEA 300

Query: 301 PTFVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQVEEHPER 360
            TFVPAMISPSQD +WN YQAP+YPSEIS+LPPP Y VNNIA  TDLY SHQQV+E+PER
Sbjct: 301 TTFVPAMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDEYPER 360

Query: 361 PGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGI 420
           PGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYY RYGI
Sbjct: 361 PGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYRRYGI 420

Query: 421 CKFGPSCKFDHPMLPASST-SELKQQPHYSNFNAAEGAEM-GGGSGNGVTVEQSA 450
           CKFGPSCKFDHP LP+SST  EL+QQPHY NF+ AEGAEM GG SGN  TVEQSA
Sbjct: 421 CKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFSTAEGAEMAGGASGNSATVEQSA 473

[Close]
BLAST of CmoCh18G001840 vs. TrEMBL
Match: D7SHC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09990 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 7.3e-124
Identity = 227/418 (54.31%), Postives = 281/418 (67.22%), Query Frame = 1 

Query: 53  LDLKDEKEAAVKDFDGGGEWEVEKNPVEGEGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQ 112
           L+ ++E++   ++ D  GE +   +  E   NLE+E    D             +    Q
Sbjct: 78  LEEREEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDD------------KSARFQ 137

Query: 113 YPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHEN--DSAEQTSKTECK 172
           YPVR +A DC+FYLRTGTCKFGS CKFNHP+R+++QV  EK+K +   +  E+  +TECK
Sbjct: 138 YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECK 197

Query: 173 YYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECPYYMRTGCCKYGANC 232
           YY RTGGCKFG ACRYNHT+ +    P+LELNFLGLPIR+ EKECPYYMRTG CKYGANC
Sbjct: 198 YYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANC 257

Query: 233 KFNHPDPTTVAVPESLSGYNNG--VLLQGGASQSQITSWTSPRVLNETPTFVPAMISPSQ 292
           +FNHPDPT     ES SGY NG  V LQ GASQS + SW+SPR LNE   FVP M SP+Q
Sbjct: 258 RFNHPDPTAAGGYESPSGYGNGGSVPLQ-GASQSNMASWSSPRALNEPAPFVPIMFSPTQ 317

Query: 293 -----DSEWNAYQAPMY---PSEISMLPPPTYAVNNIASGTDLYPSHQQ-----VEEHPE 352
                + EWN YQAP+Y   P E SM PPP + +NN A+  ++Y  HQQ     +E+ PE
Sbjct: 318 GVPPPNPEWNGYQAPLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPE 377

Query: 353 RPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYG 412
           RPGQPECSYFLKTGDCKF++ C YHHPKN   K P CTL+DKGLPLRPDQN+CT+Y+RYG
Sbjct: 378 RPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYG 437

Query: 413 ICKFGPSCKFDHPM------LPASSTSELKQQPHYSNFNAAEGAEMGGGSGNGVTVEQ 448
           ICKFGP+CKFDHP+         S+ S   Q P +     A+G   G G+GN + ++Q
Sbjct: 438 ICKFGPACKFDHPVNYGNSASAPSAESGQDQPPPFGGSVTADGVRPGSGNGNEILIQQ 482

[Close]
BLAST of CmoCh18G001840 vs. TrEMBL
Match: A0A151RVR6_CAJCA (Zinc finger CCCH domain-containing protein 43 OS=Cajanus cajan GN=KK1_031772 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.6e-123
Identity = 254/489 (51.94%), Postives = 312/489 (63.80%), Query Frame = 1 

Query: 1   MEPSEAVFVPIHCESLPSGSQSLQFHGSVHDPALFDASHVAD-DDRIHAELQ-KLDLKDE 60
           MEPSE+  V    +    G  S       HDP   D +HV   DD +  ELQ K+DLKD 
Sbjct: 1   MEPSESESVSSSTKDPQLGEPSSPVRPLDHDPQPPDLNHVTQVDDALAGELQNKVDLKDG 60

Query: 61  KEAAVK----DFDGGGEWEVEKNPV--EGEGNLEEEVVVVD------------------- 120
            E   K    + DG GE  V+   V  E +G     VVV D                   
Sbjct: 61  DETENKGSNLEEDGKGEGCVDGGGVVVEDDGGGGGGVVVDDDDGWNGGDEGCDWIENVNE 120

Query: 121 ----AGDGGEVEKEGEMRGGN-NQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQ 180
                GD   VE + E   G   QYP+R EAEDC+FYL+TGTCKFG  CKFNHPLR++ Q
Sbjct: 121 SDKVVGDVDGVENKDERSSGRAQQYPLRPEAEDCSFYLKTGTCKFGFNCKFNHPLRRKSQ 180

Query: 181 VVSEKLKHENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPI 240
              +      + AE++ + ECKYY R+GGCKFG AC++NHTR +   +PI ELNFLGLPI
Sbjct: 181 AKRDNAGEREEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKCSASPIAELNFLGLPI 240

Query: 241 RLNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNG--VLLQGGASQSQITS 300
           R+ EKECPYYMRTG CK+GANCKFNHPDPT     +S SGY NG  + LQ G SQS I+ 
Sbjct: 241 RMGEKECPYYMRTGSCKFGANCKFNHPDPT--GGGDSPSGYGNGSSISLQ-GVSQSSISP 300

Query: 301 WTSPRVLNETPTFVPAMISPS-----QDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGT 360
           W+S R LNE+  +VP ++SP+     Q+SEWN YQAP+Y SE S+ P  TY +NN A  T
Sbjct: 301 WSSTRALNESAPYVPMILSPNPGVSPQNSEWNGYQAPVYLSERSLHPSSTYVMNNPAMET 360

Query: 361 DLYPSHQ---QVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKG 420
           ++Y  +Q   QVEE+PERPG+PECSYFLKTGDCKFKS C ++HPKN   +LP C L+DKG
Sbjct: 361 NVYMHNQKQMQVEEYPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRIARLPPCNLSDKG 420

Query: 421 LPLRPDQNVCTYYSRYGICKFGPSCKFDHPMLPASST-SELKQQPHYSNFNAAEGAEMGG 446
           LPLRPDQNVCTYYSRYG+CKFGP+C++DHP+ P  ST S L QQ  Y+N  + + AE GG
Sbjct: 421 LPLRPDQNVCTYYSRYGLCKFGPACRYDHPINPPPSTMSGLDQQSSYTNSASVDVAENGG 480

[Close]
BLAST of CmoCh18G001840 vs. TrEMBL
Match: A0A0B2RIG8_GLYSO (Zinc finger CCCH domain-containing protein 43 OS=Glycine soja GN=glysoja_016709 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.2e-121
Identity = 238/460 (51.74%), Postives = 298/460 (64.78%), Query Frame = 1 

Query: 32  PALFDASHVADDDRIHAELQ-KLDLKD--EKEAAVKDF-DGGGE--------------WE 91
           P   D +H A+++ +  ELQ KLDLKD  E E  V DF DGGG               WE
Sbjct: 31  PEPSDLNHAAEEETLSGELQSKLDLKDVDESEEKVSDFNDGGGVCDEETGKGDGDSKGWE 90

Query: 92  VEKNPVE----------GEGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQYPVRSEAEDCA 151
                 E          G+G+ +++V     GD    +KEG   GG + YP+R EAEDCA
Sbjct: 91  TNSWNEEVGVDVDVDGDGDGDGDDDVDGDVDGDDEVEKKEGRNSGGTHHYPLRPEAEDCA 150

Query: 152 FYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKYYSRTGGCKFGTA 211
           FY++TG CKFG  CKFNHP++++ Q V EK     ++ E++  TECKYY R+GGCKFG +
Sbjct: 151 FYMKTGNCKFGFNCKFNHPIKRKSQAVKEKAGEREETTERSGMTECKYYQRSGGCKFGKS 210

Query: 212 CRYNHTRPR--ALPNPILELNFLGLPIRLNEKECPYYMRTGCCKYGANCKFNHPDPTTVA 271
           C+YNHTR +    P P+LELNFLGLPIR  E+ECPYYMRTG CK+GANCKFNHPDPT V 
Sbjct: 211 CKYNHTRGKISTAPAPLLELNFLGLPIRPGERECPYYMRTGSCKFGANCKFNHPDPTAVG 270

Query: 272 VP--ESLSGYNNG--VLLQGGASQSQITSWTSPRVLNETPTFVPAMISPSQ-----DSEW 331
                  SGY NG  + LQG  SQ+ + SW+SPR LNE   FVP M+SP+Q      S+W
Sbjct: 271 GGGGNPPSGYGNGGSISLQG-VSQTSVPSWSSPRTLNEASPFVPMMLSPTQGVSTQSSDW 330

Query: 332 NAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQ---VEEHPERPGQPECSYFLKTG 391
           N YQA +Y  E S+ PP T+ +NN A  T++Y  HQ+   V+E PERPG+PECSYFLKTG
Sbjct: 331 NGYQASVYLPERSIHPPSTFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSYFLKTG 390

Query: 392 DCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPM 449
           DCKFKS C +HHPKN   +LP C L+DKGLPLRPDQ+VC++YSRYGICKFGP+CKFDHP+
Sbjct: 391 DCKFKSNCKFHHPKNRVTRLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPI 450

[Close]
BLAST of CmoCh18G001840 vs. TAIR10
Match: AT3G48440.1 (AT3G48440.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 379.4 bits (973), Expect = 3.1e-105
Identity = 207/431 (48.03%), Postives = 263/431 (61.02%), Query Frame = 1 

Query: 28  SVHDPALFDASHVADDDRIHAELQKLDLKD------EKEAAVKDFDGGGEWEVEKNPVEG 87
           S HD +L D +H A+D  +  +L+ + L +      EK  +V + +GG +        + 
Sbjct: 24  SSHDRSLSDLNHAAED--LSDKLKNVGLNEVTKEQSEKMMSVSESNGGLDSNAVVTINQE 83

Query: 88  EGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNH 147
           E   EE+      GDG   E E E     N YPVR  AEDC+FY+RTG+CKFGS CKFNH
Sbjct: 84  EEEEEEDRDGYGYGDGWS-ENESE-----NVYPVRPGAEDCSFYMRTGSCKFGSSCKFNH 143

Query: 148 PLRKRHQVVSE-KLKHENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILE 207
           PL ++ Q+  + K++ + D   +    +CKYY RTGGCK+G  CR+NHT P++      E
Sbjct: 144 PLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPE 203

Query: 208 LNFLGLPIRLNEKECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLS-----GYNNGVLL 267
           LNFLGLP+R  E ECPYYMR G CKYGA CKFNHPDPTT+   +S S     G + G   
Sbjct: 204 LNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFS 263

Query: 268 QGGASQSQITSWTSPRVLNETPTFVPAMISP-----SQDSEWNAYQAPMYPSEISMLPPP 327
                Q+  TSW+SPR +N T  F+P M+S      SQ+ EWN YQA +Y SE  +  P 
Sbjct: 264 PKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPS 323

Query: 328 T-YAVNNIASGTDL----YPSHQQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNW 387
           T Y +NN ++ T +    Y      EE PERP QPECSY++KTGDCKFK  C YHHPKN 
Sbjct: 324 TTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNR 383

Query: 388 NLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPMLPASSTSE---LKQQP 433
             KLP   LNDKGLPLRPDQN+CTYYSRYGICKFGP+C+FDH + P  ST     + + P
Sbjct: 384 LPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPP 443

[Close]
BLAST of CmoCh18G001840 vs. TAIR10
Match: AT5G63260.2 (AT5G63260.2 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 354.8 bits (909), Expect = 8.1e-98
Identity = 194/430 (45.12%), Postives = 254/430 (59.07%), Query Frame = 1 

Query: 17  PSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDE-KEAAVKDFDGGGEWEVE 76
           PS S S +   +V D A  D +HV+++  +  +L+ + L D  KE +V      G  E +
Sbjct: 17  PSRSSSDEVTVTVADRAPSDLNHVSEE--LSDQLRNVGLDDSAKELSVPISVPQGNVETD 76

Query: 77  KNPVEGEGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGS 136
              + G    EEE              EG  +     YPVR ++EDC+FY+RTG+CK+GS
Sbjct: 77  SRALFGSDQKEEE--------------EGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGS 136

Query: 137 LCKFNHPLRKRHQ----------------VVSEKLKHENDSAEQTSKTECKYYSRTGGCK 196
            CKFNHP+R++ Q                +  E+++  ++  E     ECKYY RTGGCK
Sbjct: 137 SCKFNHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRERDEDVENPKLMECKYYFRTGGCK 196

Query: 197 FGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECPYYMRTGCCKYGANCKFNHPDPTT 256
           +G +CR++H +    P  + ELNFLGLPIR  EKECP+YMR G CK+G++CKFNHPDPT 
Sbjct: 197 YGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTA 256

Query: 257 VAVPES--LSGYNNGVLLQGGASQSQITSWTSPRVLNETPT--FVPAMISPS-----QDS 316
           +   +S    G N G       SQ+  TSW+S R +N T T  F+P+M   S     Q S
Sbjct: 257 IGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQAS 316

Query: 317 EWNAYQAPM-YPSEISMLPPPTYAVNNIASGTDLYPSHQQ---VEEHPERPGQPECSYFL 376
           +WN YQA   YP E S L P +Y VNN  + T  +  +Q    VEE PERP QPEC+Y+L
Sbjct: 317 DWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYL 376

Query: 377 KTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFD 417
           KTGDCKFK  C YHHPKN   K    + NDKGLPLRPDQ++CT+YSRYGICKFGP+C+FD
Sbjct: 377 KTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFD 430

[Close]
BLAST of CmoCh18G001840 vs. TAIR10
Match: AT5G16540.1 (AT5G16540.1 zinc finger nuclease 3)

HSP 1 Score: 242.3 bits (617), Expect = 5.8e-64
Identity = 119/302 (39.40%), Postives = 171/302 (56.62%), Query Frame = 1 

Query: 108 GGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKT 167
           G +  YP R    DCA+Y+RTG C+FGS C+FNHP  ++  + + ++K E    E+  + 
Sbjct: 34  GVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGEYP--ERIGQP 93

Query: 168 ECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECPYYMRTGCCKYG 227
           EC++Y +TG CKFG  C+++H R +A  +  + +N L  P+R NE +C Y++R G CK+G
Sbjct: 94  ECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFG 153

Query: 228 ANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNETPTFVPAMISPS 287
             CKFNHP   +  +  S+ G      LQ    Q    SW+    +   P          
Sbjct: 154 GTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSY-SWSRTSFVANPPRL-------- 213

Query: 288 QDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQVEEHPERPGQPECSYFLK 347
           QD    A       S+  +     ++ N++  G    P   +    PERPGQPEC +++K
Sbjct: 214 QDPSGFA-----SGSQGGLFSSGFHSGNSVPLGFYALP---RENVFPERPGQPECQFYMK 273

Query: 348 TGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDH 407
           TGDCKF ++C +HHP++     P C L+  GLPLRP + +C +YSRYGICKFGPSCKFDH
Sbjct: 274 TGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDH 316

Query: 408 PM 410
           PM
Sbjct: 334 PM 316

[Close]
BLAST of CmoCh18G001840 vs. TAIR10
Match: AT3G02830.1 (AT3G02830.1 zinc finger protein 1)

HSP 1 Score: 242.3 bits (617), Expect = 5.8e-64
Identity = 128/323 (39.63%), Postives = 177/323 (54.80%), Query Frame = 1 

Query: 113 YPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKTECKYY 172
           YP R    DC++Y+RTG C+FGS C+FNHP  +   + + +++ E    E+  + EC+YY
Sbjct: 37  YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEYP--ERIGQPECEYY 96

Query: 173 SRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECPYYMRTGCCKYGANCKF 232
            +TG CKFG  C+++H R +A     + LN LG P+R NE +C Y++RTG CK+G  CKF
Sbjct: 97  LKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKF 156

Query: 233 NHPDP--TTVAVPESLSGYNNGVLLQGGASQSQITS--WTSPRVLNETPTFVPAMISPSQ 292
           NHP P  T + VP S      G      +  S I S  W  P   +     +P  + P Q
Sbjct: 157 NHPQPQPTNMMVPTS------GQQSYPWSRASFIASPRWQDPS--SYASLIMPQGVVPVQ 216

Query: 293 DSEWNAYQAPM---YPS-----------------EISMLPPPTYAVNNIASGTDL--YPS 352
              WN Y   +    PS                 E       +++  N  S   L  Y +
Sbjct: 217 G--WNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYA 276

Query: 353 HQQVEEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQN 410
             +    PERPGQPEC +++KTGDCKF ++C +HHP++     P C L+  GLPLRP + 
Sbjct: 277 LPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEP 336

[Close]
BLAST of CmoCh18G001840 vs. TAIR10
Match: AT3G06410.1 (AT3G06410.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-59
Identity = 139/385 (36.10%), Postives = 191/385 (49.61%), Query Frame = 1 

Query: 108 GGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHENDSAEQTSKT 167
           GG   YP R +  DC +YLRTG C +GS C+FNHP R R  V+           E+    
Sbjct: 46  GGGESYPERPDEPDCIYYLRTGVCGYGSRCRFNHP-RDRGAVIGGVRGEAGALPERMGHP 105

Query: 168 ECKYYSRTGGCKFGTACRYNHTRPRALPNPI--LELNFLGLPIRLNEKECPYYMRTGCCK 227
            C+++ RTG CKFG +C+Y+H R       +  + L++LG P+R  EKEC YY+RTG CK
Sbjct: 106 VCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCK 165

Query: 228 YGANCKFNHPDPTTVA-------------VPESLSGYNNGVLLQGGASQSQITSWTSPRV 287
           +G  C+FNHP P  V               P+  + Y         +SQ      T P  
Sbjct: 166 FGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLVLTRPSF 225

Query: 288 LN----ETPTFVPAMISPSQD--SEWNAYQAPMYPSEISMLPPP----TYAVNNIASGTD 347
           L     ++P   P ++ P     S WN YQA      +S +P P    +   ++I   T 
Sbjct: 226 LTGSYLQSPYGPPMVLPPGMVPYSGWNPYQA-----SLSAMPSPGTQPSIGSSSIYGLTP 285

Query: 348 LYPS-------HQQV-------EEHPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLK 407
           L PS       +Q V       +E P+RP QPEC YF++TGDCKF S C YHHP +    
Sbjct: 286 LSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPP 345

Query: 408 LPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPML-------PASSTSELKQQ 447
                L+  GLPLRP    CT+++++GICKFGP+CKFDH M         ASS +++   
Sbjct: 346 KTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVA 405

[Close]
BLAST of CmoCh18G001840 vs. NCBI nr
Match: gi|659067397|ref|XP_008439243.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo])

HSP 1 Score: 743.4 bits (1918), Expect = 2.3e-211
Identity = 368/476 (77.31%), Postives = 392/476 (82.35%), Query Frame = 1 

Query: 1   MEPSEAVFVPIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAV VP HCE+ PSG QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSGFQSSQLHSSVHDPPPFDAQHVTTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN------------------------LEEEVVVVDA-G 120
             VKDFD GGEWEVEKNP E EGN                        ++EEV   D  G
Sbjct: 61  EPVKDFDDGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDGYDDVDEEVDAGDGDG 120

Query: 121 DGGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLK 180
           DGGEVE++G+ RG +NQYPVR EAEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK
Sbjct: 121 DGGEVERKGDWRGKSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLK 180

Query: 181 HENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKEC 240
           +++DSA   +KTECK+Y RTGGCKFG ACRYNHTR RAL +PILELNFLGLPIR +EKEC
Sbjct: 181 YDDDSAGTANKTECKFYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIRPDEKEC 240

Query: 241 PYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNE 300
           PYYMRTG CKYGANCKFNHPDPTTVA  ESLSGYNNGV LQ GASQSQITSWTSPRVLNE
Sbjct: 241 PYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQ-GASQSQITSWTSPRVLNE 300

Query: 301 TPTFVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQVEEHPE 360
             TFVPAMISPSQDSEWN YQAP+YPSEIS+LPPP Y VNNIA   DLY SHQQV+E+PE
Sbjct: 301 ATTFVPAMISPSQDSEWNGYQAPIYPSEISVLPPPPYVVNNIAPEADLYSSHQQVDEYPE 360

Query: 361 RPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYG 420
           RPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYYSRYG
Sbjct: 361 RPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYSRYG 420

Query: 421 ICKFGPSCKFDHPMLPASST-SELKQQPHYSNFNAAEGAEM-GGGSGNGVTVEQSA 450
           ICKFGPSCKFDHP LP SST  EL+QQPHY NF+AAEGAEM GG SGN  TVEQSA
Sbjct: 421 ICKFGPSCKFDHPFLPTSSTVGELEQQPHYGNFSAAEGAEMAGGASGNSATVEQSA 475

[Close]
BLAST of CmoCh18G001840 vs. NCBI nr
Match: gi|449469596|ref|XP_004152505.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sativus])

HSP 1 Score: 739.6 bits (1908), Expect = 3.3e-210
Identity = 364/475 (76.63%), Postives = 391/475 (82.32%), Query Frame = 1 

Query: 1   MEPSEAVFVPIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAV VP HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN------------------------LEEEVVVVDAGD 120
             VKDFDGGGEWEVEKNP E EGN                        ++EEV   D GD
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGD-GD 120

Query: 121 GGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKH 180
           GGEVE++G+ RG +NQYPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK+
Sbjct: 121 GGEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKY 180

Query: 181 ENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECP 240
           E+DS    ++TECK+Y RTGGCKFG ACRYNHTRPRAL +PILELNFLGLPIR +EKECP
Sbjct: 181 EDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECP 240

Query: 241 YYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNET 300
           YYMRTG CKYGANCKFNHPDPTTVA  ESLSGYNNGV LQ GASQSQITSWTSPRVLNE 
Sbjct: 241 YYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQ-GASQSQITSWTSPRVLNEA 300

Query: 301 PTFVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQVEEHPER 360
            TFVPAMISPSQD +WN YQAP+YPSEIS+LPPP Y VNNIA  TDLY SHQQV+E+PER
Sbjct: 301 TTFVPAMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDEYPER 360

Query: 361 PGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGI 420
           PGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYY RYGI
Sbjct: 361 PGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYRRYGI 420

Query: 421 CKFGPSCKFDHPMLPASST-SELKQQPHYSNFNAAEGAEM-GGGSGNGVTVEQSA 450
           CKFGPSCKFDHP LP+SST  EL+QQPHY NF+ AEGAEM GG SGN  TVEQSA
Sbjct: 421 CKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFSTAEGAEMAGGASGNSATVEQSA 473

[Close]
BLAST of CmoCh18G001840 vs. NCBI nr
Match: gi|778657993|ref|XP_011651926.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sativus])

HSP 1 Score: 733.8 bits (1893), Expect = 1.8e-208
Identity = 364/479 (75.99%), Postives = 391/479 (81.63%), Query Frame = 1 

Query: 1   MEPSEAVFVPIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAV VP HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN------------------------LEEEVVVVDAGD 120
             VKDFDGGGEWEVEKNP E EGN                        ++EEV   D GD
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGD-GD 120

Query: 121 GGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKH 180
           GGEVE++G+ RG +NQYPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++QVVSEKLK+
Sbjct: 121 GGEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKY 180

Query: 181 ENDSAEQTSKTECK----YYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNE 240
           E+DS    ++TECK    +Y RTGGCKFG ACRYNHTRPRAL +PILELNFLGLPIR +E
Sbjct: 181 EDDSTGTANRTECKVSIVFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDE 240

Query: 241 KECPYYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRV 300
           KECPYYMRTG CKYGANCKFNHPDPTTVA  ESLSGYNNGV LQ GASQSQITSWTSPRV
Sbjct: 241 KECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQ-GASQSQITSWTSPRV 300

Query: 301 LNETPTFVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQVEE 360
           LNE  TFVPAMISPSQD +WN YQAP+YPSEIS+LPPP Y VNNIA  TDLY SHQQV+E
Sbjct: 301 LNEATTFVPAMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDE 360

Query: 361 HPERPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYS 420
           +PERPGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYY 
Sbjct: 361 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 420

Query: 421 RYGICKFGPSCKFDHPMLPASST-SELKQQPHYSNFNAAEGAEM-GGGSGNGVTVEQSA 450
           RYGICKFGPSCKFDHP LP+SST  EL+QQPHY NF+ AEGAEM GG SGN  TVEQSA
Sbjct: 421 RYGICKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFSTAEGAEMAGGASGNSATVEQSA 477

[Close]
BLAST of CmoCh18G001840 vs. NCBI nr
Match: gi|778657996|ref|XP_011651936.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sativus])

HSP 1 Score: 700.3 bits (1806), Expect = 2.2e-198
Identity = 350/475 (73.68%), Postives = 373/475 (78.53%), Query Frame = 1 

Query: 1   MEPSEAVFVPIHCESLPSGSQSLQFHGSVHDPALFDASHVADDDRIHAELQKLDLKDEKE 60
           MEPSEAV VP HCE+ PS  QS Q H SVHDP  FDA HV  DDRIHAELQKLDLKDEKE
Sbjct: 1   MEPSEAVSVPNHCEAPPSEFQSSQLHSSVHDPPPFDAQHVPTDDRIHAELQKLDLKDEKE 60

Query: 61  AAVKDFDGGGEWEVEKNPVEGEGN------------------------LEEEVVVVDAGD 120
             VKDFDGGGEWEVEKNP E EGN                        ++EEV   D GD
Sbjct: 61  EPVKDFDGGGEWEVEKNPYEDEGNDTKKIDENDRDRSVRNDDDDDYDDVDEEVDAGD-GD 120

Query: 121 GGEVEKEGEMRGGNNQYPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKH 180
           GGEVE++G+ RG +NQYPVR +AEDCAFYL+TGTCKFGS CKFNHP+RK++Q        
Sbjct: 121 GGEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQ-------- 180

Query: 181 ENDSAEQTSKTECKYYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECP 240
                         +Y RTGGCKFG ACRYNHTRPRAL +PILELNFLGLPIR +EKECP
Sbjct: 181 --------------FYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECP 240

Query: 241 YYMRTGCCKYGANCKFNHPDPTTVAVPESLSGYNNGVLLQGGASQSQITSWTSPRVLNET 300
           YYMRTG CKYGANCKFNHPDPTTVA  ESLSGYNNGV LQ GASQSQITSWTSPRVLNE 
Sbjct: 241 YYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQ-GASQSQITSWTSPRVLNEA 300

Query: 301 PTFVPAMISPSQDSEWNAYQAPMYPSEISMLPPPTYAVNNIASGTDLYPSHQQVEEHPER 360
            TFVPAMISPSQD +WN YQAP+YPSEIS+LPPP Y VNNIA  TDLY SHQQV+E+PER
Sbjct: 301 TTFVPAMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDEYPER 360

Query: 361 PGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYGI 420
           PGQPECSYFLKTGDCKFKSLC YHHPKN N KLPTCTLNDKGLPLRPDQNVCTYY RYGI
Sbjct: 361 PGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYRRYGI 420

Query: 421 CKFGPSCKFDHPMLPASST-SELKQQPHYSNFNAAEGAEM-GGGSGNGVTVEQSA 450
           CKFGPSCKFDHP LP+SST  EL+QQPHY NF+ AEGAEM GG SGN  TVEQSA
Sbjct: 421 CKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFSTAEGAEMAGGASGNSATVEQSA 451

[Close]
BLAST of CmoCh18G001840 vs. NCBI nr
Match: gi|225456787|ref|XP_002277300.1| (PREDICTED: zinc finger CCCH domain-containing protein 67 [Vitis vinifera])

HSP 1 Score: 452.2 bits (1162), Expect = 1.1e-123
Identity = 227/418 (54.31%), Postives = 281/418 (67.22%), Query Frame = 1 

Query: 53  LDLKDEKEAAVKDFDGGGEWEVEKNPVEGEGNLEEEVVVVDAGDGGEVEKEGEMRGGNNQ 112
           L+ ++E++   ++ D  GE +   +  E   NLE+E    D             +    Q
Sbjct: 78  LEEREEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDD------------KSARFQ 137

Query: 113 YPVRSEAEDCAFYLRTGTCKFGSLCKFNHPLRKRHQVVSEKLKHEN--DSAEQTSKTECK 172
           YPVR +A DC+FYLRTGTCKFGS CKFNHP+R+++QV  EK+K +   +  E+  +TECK
Sbjct: 138 YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECK 197

Query: 173 YYSRTGGCKFGTACRYNHTRPRALPNPILELNFLGLPIRLNEKECPYYMRTGCCKYGANC 232
           YY RTGGCKFG ACRYNHT+ +    P+LELNFLGLPIR+ EKECPYYMRTG CKYGANC
Sbjct: 198 YYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANC 257

Query: 233 KFNHPDPTTVAVPESLSGYNNG--VLLQGGASQSQITSWTSPRVLNETPTFVPAMISPSQ 292
           +FNHPDPT     ES SGY NG  V LQ GASQS + SW+SPR LNE   FVP M SP+Q
Sbjct: 258 RFNHPDPTAAGGYESPSGYGNGGSVPLQ-GASQSNMASWSSPRALNEPAPFVPIMFSPTQ 317

Query: 293 -----DSEWNAYQAPMY---PSEISMLPPPTYAVNNIASGTDLYPSHQQ-----VEEHPE 352
                + EWN YQAP+Y   P E SM PPP + +NN A+  ++Y  HQQ     +E+ PE
Sbjct: 318 GVPPPNPEWNGYQAPLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPE 377

Query: 353 RPGQPECSYFLKTGDCKFKSLCIYHHPKNWNLKLPTCTLNDKGLPLRPDQNVCTYYSRYG 412
           RPGQPECSYFLKTGDCKF++ C YHHPKN   K P CTL+DKGLPLRPDQN+CT+Y+RYG
Sbjct: 378 RPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYG 437

Query: 413 ICKFGPSCKFDHPM------LPASSTSELKQQPHYSNFNAAEGAEMGGGSGNGVTVEQ 448
           ICKFGP+CKFDHP+         S+ S   Q P +     A+G   G G+GN + ++Q
Sbjct: 438 ICKFGPACKFDHPVNYGNSASAPSAESGQDQPPPFGGSVTADGVRPGSGNGNEILIQQ 482

The following BLAST results are available for this feature:
BLAST of CmoCh18G001840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H43_ARATH5.4e-10448.03Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g484... [more]
C3H67_ARATH1.1e-9946.86Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g632... [more]
C3H66_ORYSJ6.9e-6738.22Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN... [more]
C3H12_ORYSJ4.2e-6439.88Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN... [more]
C3H65_ORYSJ1.2e-6344.80Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN... [more]
BLAST of CmoCh18G001840 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBX3_CUCME1.6e-21177.31Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LU93_CUCSA2.3e-21076.63Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1[more]
D7SHC4_VITVI7.3e-12454.31Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09990 PE=4 SV=... [more]
A0A151RVR6_CAJCA1.6e-12351.94Zinc finger CCCH domain-containing protein 43 OS=Cajanus cajan GN=KK1_031772 PE=... [more]
A0A0B2RIG8_GLYSO1.2e-12151.74Zinc finger CCCH domain-containing protein 43 OS=Glycine soja GN=glysoja_016709 ... [more]
BLAST of CmoCh18G001840 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48440.13.1e-10548.03 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G63260.28.1e-9845.12 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G16540.15.8e-6439.40 zinc finger nuclease 3[more]
AT3G02830.15.8e-6439.63 zinc finger protein 1[more]
AT3G06410.15.6e-5936.10 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of CmoCh18G001840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067397|ref|XP_008439243.1|2.3e-21177.31PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo][more]
gi|449469596|ref|XP_004152505.1|3.3e-21076.63PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sat... [more]
gi|778657993|ref|XP_011651926.1|1.8e-20875.99PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sat... [more]
gi|778657996|ref|XP_011651936.1|2.2e-19873.68PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sat... [more]
gi|225456787|ref|XP_002277300.1|1.1e-12354.31PREDICTED: zinc finger CCCH domain-containing protein 67 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G001840.1CmoCh18G001840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 169..189
score: 1.9E-4coord: 122..141
score: 2.9E-4coord: 215..234
score: 8.5E-5coord: 387..407
score: 4.
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 385..409
score: 4.5E-9coord: 213..235
score: 1.2E-8coord: 120..142
score: 2.2E-9coord: 167..188
score: 1.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 116..143
score: 1.2E-5coord: 336..363
score: 0.01coord: 382..409
score: 1.1E-5coord: 211..236
score: 2.7E-6coord: 164..190
score: 5.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 116..144
score: 14.051coord: 163..191
score: 14.07coord: 336..364
score: 12.436coord: 382..410
score: 14.596coord: 209..237
score: 15
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 166..191
score: 3.4E-5coord: 116..146
score: 5.76E-6coord: 380..408
score: 3.27E-6coord: 208..237
score: 8.6
NoneNo IPR availablePANTHERPTHR12506PROTEIN PHOSPHATASE RELATEDcoord: 67..417
score: 9.0E
NoneNo IPR availablePANTHERPTHR12506:SF20ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43coord: 67..417
score: 9.0E
NoneNo IPR availablePFAMPF14608zf-CCCH_2coord: 342..362
score: